1
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Hsiang YR, Meitei NJ, Henry GE, Hsu SCN, Lin YF. Mechanistic insights into nitric oxide generation from nitrite via O-atom transfer in the unsymmetrical β-diketiminato copper(II) nitrite complex. Dalton Trans 2024; 53:18629-18639. [PMID: 39479872 DOI: 10.1039/d4dt02359e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2024]
Abstract
In this study, we employed DFT calculations to elucidate the mechanism of NO generation from nitrite via PPh3-induced oxygen atom transfer (OAT) in the unsymmetrical β-diketiminato copper(II), LCuIIONO. We discovered that the OAT process involves the cooperation of two PPh3 ligands and follows the mechanism distinct from that of the symmetrical β-diketiminato analogue. The ΔG‡ value, calculated to be 34.8 kcal mol-1, closely matches experimental data. The finding is further supported by analyzing the OAT product yields with varying equivalents of PPh3. The penta-coordinated species 5a, with PPh3 occupying the axial site, forms in the final stage of the OAT process. The isomerization of 5a and the decoordination of the hemilabile pyridyl arm synergistically reduce Cu(II) to Cu(I), facilitating NO release from the Cu(I) centre. These computational results provide valuable insights for the ligand design for PPh3-induced OAT reactions to produce NO in Cu(II) nitrite systems.
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Affiliation(s)
- Yi-Rong Hsiang
- Department of Chemistry, National Dong Hwa University, Hualien 974301, Taiwan.
- Department of Medicinal and Applied Chemistry, Kaohsiung Medical University, Kaohsiung 807378, Taiwan.
| | - Naorem Jemes Meitei
- Department of Medicinal and Applied Chemistry, Kaohsiung Medical University, Kaohsiung 807378, Taiwan.
| | - Gifta Evangeline Henry
- Department of Medicinal and Applied Chemistry, Kaohsiung Medical University, Kaohsiung 807378, Taiwan.
- PG and Research Department of Chemistry, Bishop Heber College affiliated to Bharathidasan University, Tiruchirapalli 620017, India
| | - Sodio C N Hsu
- Department of Medicinal and Applied Chemistry, Kaohsiung Medical University, Kaohsiung 807378, Taiwan.
- Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung 807378, Taiwan
| | - Ya-Fan Lin
- Department of Chemistry, National Dong Hwa University, Hualien 974301, Taiwan.
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2
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Chen J, Wei WT, Li Z, Lu Z. Metal-catalyzed Markovnikov-type selective hydrofunctionalization of terminal alkynes. Chem Soc Rev 2024; 53:7566-7589. [PMID: 38904176 DOI: 10.1039/d4cs00167b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/22/2024]
Abstract
Metal-catalyzed highly Markovnikov-type selective hydrofunctionalization of terminal alkynes provides a straightforward and atom-economical route to access 1,1-disubstituted alkenes, which have a wide range of applications in organic synthesis. However, the highly Markovnikov-type selective transformations are challenging due to the electronic and steric effects during the addition process. With the development of metal-catalyzed organic synthesis, different metal catalysts have been developed to solve this challenge, especially for platinum group metal catalysts. In this perspective, we review homogeneous metal-catalyzed Markovnikov-type selective hydrofunctionalization of terminal alkynes according to the classified element types as well as reaction mechanisms. Future avenues for investigation are also presented to help expand this exciting field.
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Affiliation(s)
- Jieping Chen
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang 310058, China.
| | - Wen-Ting Wei
- School of Materials Science and Chemical Engineering, Ningbo University, Zhejiang, 315211, China
| | - Zhuocheng Li
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang 310058, China.
| | - Zhan Lu
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang 310058, China.
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3
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Liu SC, Zhu XR, Liu DY, Fang DC. DFT calculations in solution systems: solvation energy, dispersion energy and entropy. Phys Chem Chem Phys 2023; 25:913-931. [PMID: 36519338 DOI: 10.1039/d2cp04720a] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
DFT calculations of reaction mechanisms in solution have always been a hot topic, especially for transition-metal-catalyzed reactions. The calculation of solvation energy is performed using either the polarizable continuum model (PCM) or the universal solvation model SMD. The PCM calculation is very sensitive to the choice of atomic radii to form a cavity, where the self-consistent isodensity PCM (SCI-PCM) has been recognized as the best choice and our IDSCRF radii can provide a similar cavity. Moving from a gas-phase case to a solution case, dispersion energy and entropy should be carefully treated. The solvent-solute dispersion is also important in solution systems, and it should be calculated together with the solute dispersion. Only half of the solvent-solute dispersion energy from the PCM calculation belongs to the solute molecules to maintain a thermal equilibrium between a solute molecule and its cavity, similar to the treatment of electrostatic energy. Relative solute dispersion energy should also be shared equally with the newly formed cavity. The entropy change from a gas phase to a liquid phase is quite large, but the modern quantum chemistry programs can only calculate the gas-phase translational entropy based on the idea-gas equation. In this review, we will provide an operable method to calculate the solution translational entropy, which has been coded in our THERMO program.
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Affiliation(s)
- Si-Cong Liu
- College of Chemistry, Beijing Normal University, Beijing 100875, China.
| | - Xin-Rui Zhu
- College of Chemistry, Beijing Normal University, Beijing 100875, China.
| | - Dan-Yang Liu
- College of Chemistry, Beijing Normal University, Beijing 100875, China.
| | - De-Cai Fang
- College of Chemistry, Beijing Normal University, Beijing 100875, China.
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4
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Maity B, Zhu C, Rueping M, Cavallo L. Mechanistic Understanding of Arylation vs Alkylation of Aliphatic Csp3–H Bonds by Decatungstate–Nickel Catalysis. ACS Catal 2021. [DOI: 10.1021/acscatal.1c04142] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Bholanath Maity
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal 23955-6900, Saudi Arabia
| | - Chen Zhu
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal 23955-6900, Saudi Arabia
| | - Magnus Rueping
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal 23955-6900, Saudi Arabia
| | - Luigi Cavallo
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal 23955-6900, Saudi Arabia
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5
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Zeng JJ, Zhao B, Tang XB, Han S, Yang ZQ, Liu ZP, Zhang W, Lu J. Metal-free catalytic hydrocarboxylation of hexafluorobut-2-yne. RSC Adv 2021; 11:38938-38943. [PMID: 35493246 PMCID: PMC9044190 DOI: 10.1039/d1ra06526b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2021] [Accepted: 11/14/2021] [Indexed: 11/21/2022] Open
Abstract
An efficient method for stereoselective synthesis of trifluorinated enol esters catalyzed by base was introduced.
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Affiliation(s)
- Ji-Jun Zeng
- State Key Laboratory of Fluorine & Nitrogen Chemicals, Xi'an Modern Chemistry Research Institute, Xi'an, 710065, China
| | - Bo Zhao
- State Key Laboratory of Fluorine & Nitrogen Chemicals, Xi'an Modern Chemistry Research Institute, Xi'an, 710065, China
| | - Xiao-Bo Tang
- State Key Laboratory of Fluorine & Nitrogen Chemicals, Xi'an Modern Chemistry Research Institute, Xi'an, 710065, China
| | - Sheng Han
- State Key Laboratory of Fluorine & Nitrogen Chemicals, Xi'an Modern Chemistry Research Institute, Xi'an, 710065, China
| | - Zhi-Qiang Yang
- State Key Laboratory of Fluorine & Nitrogen Chemicals, Xi'an Modern Chemistry Research Institute, Xi'an, 710065, China
| | - Ze-Peng Liu
- State Key Laboratory of Fluorine & Nitrogen Chemicals, Xi'an Modern Chemistry Research Institute, Xi'an, 710065, China
| | - Wei Zhang
- State Key Laboratory of Fluorine & Nitrogen Chemicals, Xi'an Modern Chemistry Research Institute, Xi'an, 710065, China
| | - Jian Lu
- State Key Laboratory of Fluorine & Nitrogen Chemicals, Xi'an Modern Chemistry Research Institute, Xi'an, 710065, China
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6
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Maity B, Zhu C, Yue H, Huang L, Harb M, Minenkov Y, Rueping M, Cavallo L. Mechanistic Insight into the Photoredox-Nickel-HAT Triple Catalyzed Arylation and Alkylation of α-Amino C sp3-H Bonds. J Am Chem Soc 2020; 142:16942-16952. [PMID: 32900195 DOI: 10.1021/jacs.0c05010] [Citation(s) in RCA: 52] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
We report here a comprehensive computational analysis of the mechanisms of the photoredox-nickel-HAT (HAT: hydrogen atom transfer) catalyzed arylation and alkylation of α-amino Csp3-H bonds developed by MacMillan and co-workers. Different alternatives for the three catalytic cycles were tested to identify unambiguously the operative reaction mechanism. Our analysis indicated that the IrIII photoredox catalyst, upon irradiation with visible light, can be either reduced or oxidized by the HAT and nickel catalysts, respectively, indicating that both reductive and oxidative quenching catalytic cycles can be operative, although the reductive cycle is favored. Our analysis of the HAT cycle indicated that activation of a α-amino Csp3-H bond of the substrate is facile and selective relative to activation of a β-amino Csp3-H bond. Finally, our analysis of the nickel cycle indicated that both arylation and alkylation of α-amino Csp3-H bonds occurs via the sequence of nickel oxidation states NiI-NiII-NiI-NiIII and of elementary steps: radical addition-SET-oxidative addition-reductive elimination.
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Affiliation(s)
- Bholanath Maity
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal, 23955-6900 Saudi Arabia
| | - Chen Zhu
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal, 23955-6900 Saudi Arabia
| | - Huifeng Yue
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal, 23955-6900 Saudi Arabia
| | - Long Huang
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
| | - Moussab Harb
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal, 23955-6900 Saudi Arabia
| | - Yury Minenkov
- N. N. Semenov Federal Research Center for Chemical Physics RAS, Kosygina Street 4, 119991 Moscow, Russia
| | - Magnus Rueping
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal, 23955-6900 Saudi Arabia
| | - Luigi Cavallo
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal, 23955-6900 Saudi Arabia
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7
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Yue H, Zhu C, Kancherla R, Liu F, Rueping M. Regioselective Hydroalkylation and Arylalkylation of Alkynes by Photoredox/Nickel Dual Catalysis: Application and Mechanism. Angew Chem Int Ed Engl 2020; 59:5738-5746. [PMID: 31901214 PMCID: PMC7154703 DOI: 10.1002/anie.201914061] [Citation(s) in RCA: 63] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2019] [Revised: 12/20/2019] [Indexed: 11/08/2022]
Abstract
Alkynes are an important class of organic molecules due to their utility as versatile building blocks in synthesis. Although efforts have been devoted to the difunctionalization of alkynes, general and practical strategies for the direct hydroalkylation and alkylarylation of terminal alkynes under mild reaction conditions are less explored. Herein, we report a photoredox/nickel dual-catalyzed anti-Markovnikov-type hydroalkylation of terminal alkynes as well as a one-pot arylalkylation of alkynes with alkyl carboxylic acids and aryl bromides via a three-component cross-coupling. The results indicate that the transformations proceed via a new mechanism involving a single-electron transfer with subsequent energy-transfer activation pathways. Moreover, steady-state and time-resolved fluorescence-spectroscopy measurements, density functional theory (DFT) calculations, and wavefunction analysis have been performed to give an insight into the catalytic cycle.
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Affiliation(s)
- Huifeng Yue
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal, 23955-6900, Saudi Arabia.,Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany
| | - Chen Zhu
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal, 23955-6900, Saudi Arabia.,Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany
| | - Rajesh Kancherla
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal, 23955-6900, Saudi Arabia
| | - Fangying Liu
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany
| | - Magnus Rueping
- King Abdullah University of Science and Technology (KAUST), KAUST Catalysis Center (KCC), Thuwal, 23955-6900, Saudi Arabia.,Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany
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8
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Yue H, Zhu C, Kancherla R, Liu F, Rueping M. Regioselective Hydroalkylation and Arylalkylation of Alkynes by Photoredox/Nickel Dual Catalysis: Application and Mechanism. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201914061] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Huifeng Yue
- King Abdullah University of Science and Technology (KAUST) KAUST Catalysis Center (KCC) Thuwal 23955-6900 Saudi Arabia
- Institute of Organic Chemistry RWTH Aachen University Landoltweg 1 52074 Aachen Germany
| | - Chen Zhu
- King Abdullah University of Science and Technology (KAUST) KAUST Catalysis Center (KCC) Thuwal 23955-6900 Saudi Arabia
- Institute of Organic Chemistry RWTH Aachen University Landoltweg 1 52074 Aachen Germany
| | - Rajesh Kancherla
- King Abdullah University of Science and Technology (KAUST) KAUST Catalysis Center (KCC) Thuwal 23955-6900 Saudi Arabia
| | - Fangying Liu
- Institute of Organic Chemistry RWTH Aachen University Landoltweg 1 52074 Aachen Germany
| | - Magnus Rueping
- King Abdullah University of Science and Technology (KAUST) KAUST Catalysis Center (KCC) Thuwal 23955-6900 Saudi Arabia
- Institute of Organic Chemistry RWTH Aachen University Landoltweg 1 52074 Aachen Germany
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9
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Herndon JW. The chemistry of the carbon-transition metal double and triple bond: Annual survey covering the year 2018. Coord Chem Rev 2019. [DOI: 10.1016/j.ccr.2019.213051] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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10
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Mondal T, Dutta S, De S, Koley D. Computational Exploration of Mechanistic Avenues in C-H Activation Assisted Pd-Catalyzed Carbonylative Coupling. J Org Chem 2019; 84:257-272. [PMID: 30525639 DOI: 10.1021/acs.joc.8b02630] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
The detailed mechanism of the intermolecular Pd-catalyzed carbonylative coupling reaction between aryl bromides and polyfluoroarenes relying on C(sp2)-H activation was investigated using state-of-the-art computational methods (SMD-B3LYP-D3(BJ)/BS2//B3LYP-D3/BS1). The mechanism unveils the necessary and important roles of a slight excess of carbon monoxide: acting as a ligand in the active catalyst state, participating as a reactant in the carbonylation process, and accelerating the final reductive elimination event. Importantly, the desired carbonylative coupling route follows the rate-limiting C-H activation process via the concerted metalation-deprotonation pathway, which is slightly more feasible than the decarboxylative route leading to byproduct formation by 1.2 kcal/mol. The analyses of the free energies indicate that the choice of base has a significant effect on the reaction mechanism and its energetics. The Cs2CO3 base guides the reaction toward the coupling route, whereas carbonate bases such as K2CO3 and Na2CO3 switch toward an undesired decarboxylative path. However, K3PO4 significantly reduces the C-H activation barrier over the decarboxylation reaction barrier and can act as a potential alternative base. The positional influence of a methoxy substituent in bromoanisole and different substituent effects in polyfluoroarenes were also considered. Our results show that different substituents impose significant impact on the desired carbonylative product formation energetics. Considering the influence of several ligands leads to the conclusion that other phosphine and N-heterocyclic carbene, such as P nBuAd2 and IMes, can be used as an efficient alternative than the experimentally reported P tBu3 ligand exhibiting a clear preference for C-H activation (ΔΔ⧧ GLS) by 7.1 and 10.9 kcal/mol, respectively. We have also utilized the energetic span model to interpret the experimental results. Moreover, to elucidate the origin of activation barriers, energy decomposition analysis calculations were accomplished for the critical transition states populating the energy profiles.
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Affiliation(s)
- Totan Mondal
- Department of Chemical Sciences , Indian Institute of Science Education and Research (IISER) Kolkata , Mohanpur 741 246 , India
| | - Sayan Dutta
- Department of Chemical Sciences , Indian Institute of Science Education and Research (IISER) Kolkata , Mohanpur 741 246 , India
| | - Sriman De
- Department of Chemical Sciences , Indian Institute of Science Education and Research (IISER) Kolkata , Mohanpur 741 246 , India
| | - Debasis Koley
- Department of Chemical Sciences , Indian Institute of Science Education and Research (IISER) Kolkata , Mohanpur 741 246 , India
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11
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Dutta S, Mondal T, De S, Rudra K, Koley D. Strengths of different Lewis bases in stabilizing titanium fluorides: A theoretical insight. Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2018.10.013] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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12
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Iwasawa N, Watanabe S, Ario A, Sogo H. Re(I)-Catalyzed Hydropropargylation of Silyl Enol Ethers Utilizing Dynamic Interconversion of Vinylidene–Alkenylmetal Intermediates via 1,5-Hydride Transfer. J Am Chem Soc 2018; 140:7769-7772. [DOI: 10.1021/jacs.8b02903] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Nobuharu Iwasawa
- Department of Chemistry, School of Science, Tokyo Institute of Technology, O-okayama, Meguro-ku, Tokyo 152-8551, Japan
| | - Shoya Watanabe
- Department of Chemistry, School of Science, Tokyo Institute of Technology, O-okayama, Meguro-ku, Tokyo 152-8551, Japan
| | - Akane Ario
- Department of Chemistry, School of Science, Tokyo Institute of Technology, O-okayama, Meguro-ku, Tokyo 152-8551, Japan
| | - Hideyuki Sogo
- Department of Chemistry, School of Science, Tokyo Institute of Technology, O-okayama, Meguro-ku, Tokyo 152-8551, Japan
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