Regulation of the Near‐IR Spectral Properties of Individually Dissolved Single‐Walled Carbon Nanotubes in Aqueous Solutions of dsDNA

Monitoring the antioxidant effects of catechin using single-walled carbon nanotubes: Comparative analysis by near-infrared absorption and near-infrared photoluminescence

We measured the optical responses of single-walled carbon nanotubes (SWNTs) after adding Japanese green tea or catechin. SWNTs were covered with DNA in aqueous solution, and tea or catechin solution was added to the DNA-SWNT suspension. The antioxidant effects of tea and catechin were detected as changes in the near-infrared (NIR) absorption (ABS) and NIR-photoluminescence (PL) spectra of the SWNTs. Commercial Japanese tea, diluted 100 times and containing 15μg/mL catechin, was sufficient for recovering NIR-ABS and NIR-PL spectra when the DNA-SWNT suspension was pre-treated with 0.03% hydrogen peroxide(H₂O₂). Similar results were obtained with 15μg/mL of pure catechin solution. SWNTs with specific chirality were sensitive to the NIR-ABS and NIR-PL changes. The (10, 5)/(8, 7) and (9, 4) SWNTs showed the highest recovery in NIR-ABS and NIR-PL, respectively. NIR-PL recovery was higher than that of NIR-ABS for (10, 5)/(8, 7) and (9, 4). Spectral changes could be monitored thoroughly at pH 8.0, contrary to pH 6.0 and 7.3. However, the most dynamic recovery of NIR-ABS and NIR-PL was observed at pH 6.0. Furthermore, time-lapse measurements revealed that recovery was faster with tea or catechin addition than H₂O₂-induced oxidation.

Atomic Force Microscopy of DNA-wrapped Single-walled Carbon Nanotubes in Aqueous Solution

We evaluated hybrids of DNA and single-walled carbon nanotubes (SWNTs) in aqueous solution and in air using atomic force microscopy (AFM). Although intensive AFM observations of these hybrids were previously carried out for samples in air, this is the first report on AFM observations of these hybrids in solution. As expected, diameters of DNA-SWNT hybrids dramatically increased in tris(hydroxymethyl)aminomethane-ethylenediaminetetraacetic acid (TE) buffer solution. The data suggest that DNA molecules maintain their structures even on the SWNT surfaces. Furthermore, we simultaneously observed single DNA-SWNT hybrids using three different AFM modes in air and in the TE buffer solution. Height value of the hybrids was largest in the solution, and lowest for the mode that repulsive force is expected in air. For the bare SWNT molecules, height differences among the three AFM modes were much lower than those of the DNA-SWNT hybrids. DNA molecules adsorbed on SWNT surfaces flexibly changed their morphology as well as DNA molecules on flat surfaces such as mica. This is hopeful results for biological applications of DNA-SWNT hybrids. In addition, our results revealed the importance of the single-molecule approach to evaluate DNA structures on SWNT surfaces.

Thermodynamics for the Formation of Double-Stranded DNA-Single-Walled Carbon Nanotube Hybrids

For the first time, the thermodynamics are described for the formation of double-stranded DNA (ds-DNA)-single-walled carbon nanotube (SWNT) hybrids. This treatment is applied to the exchange reaction of sodium cholate (SC) molecules on SWNTs and the ds-DNAs d(A)20 -d(T)20 and nuclear factor (NF)-κB decoy. UV/Vis/near-IR spectroscopy with temperature variations was used for analyzing the exchange reaction on the SWNTs with four different chiralities: (n,m)=(8,3), (6,5), (7,5), and (8,6). Single-stranded DNAs (ss-DNAs), including d(A)20 and d(T)20, are also used for comparison. The d(A)20-d(T)20 shows a drastic change in its thermodynamic parameters around the melting temperature (Tm ) of the DNA oligomer. No such Tm dependency was measured, owing to high Tm in the NF-κB decoy DNA and no Tm in the ss-DNA.

An intensive dispersion and synchronous assembly of single-walled carbon nanotubes in a surfactant–oil–water association system

An intensive dispersion and synchronous assembly of single-walled carbon nanotubes were achieved using a surfactant–oil–water association system.

Sugar-functionalized triptycenes used for dispersion of single-walled carbon nanotubes in aqueous solution by supramolecular interaction

Two water-soluble sugar-functionalized triptycene derivatives were synthesized and used for dispersion of SWCNTs in aqueous solution via supramolecular interaction.

Hybrids of Nucleic Acids and Carbon Nanotubes for Nanobiotechnology

Recent progress in the combination of nucleic acids and carbon nanotubes (CNTs) has been briefly reviewed here. Since discovering the hybridization phenomenon of DNA molecules and CNTs in 2003, a large amount of fundamental and applied research has been carried out. Among thousands of papers published since 2003, approximately 240 papers focused on biological applications were selected and categorized based on the types of nucleic acids used, but not the types of CNTs. This survey revealed that the hybridization phenomenon is strongly affected by various factors, such as DNA sequences, and for this reason, fundamental studies on the hybridization phenomenon are important. Additionally, many research groups have proposed numerous practical applications, such as nanobiosensors. The goal of this review is to provide perspective on biological applications using hybrids of nucleic acids and CNTs.

Surfactant concentration dependent spectral effects of oxygen and depletion interactions in sodium dodecyl sulfate dispersions of carbon nanotubes

Quenching of optical absorbance spectra for carbon nanotubes (CNTs) dispersed in sodium dodecyl sulfate (SDS) has been observed to be more pronounced at higher concentrations of the surfactant. The protonation-based quenching behavior displays wavelength dependence, affecting larger diameter nanotube species preferentially. Although absorbance may be recovered by hydroxide addition, pH measurements suggest that hydrolysis of SDS does not play a major role in the short term quenching behavior at high SDS concentrations. The degree of quenching is observed to correlate well with an increase in attractive depletion as SDS concentration is increased, while the extent of depletion is found to depend heavily on the concentration of preparation in comparison to the final SDS concentration. Attractive depletion in SDS is also found to be preferential for CNTs of larger diameter. It is proposed that depletion enhances the quenching effect due to close association of CNT-SDS complexes providing higher SDS densities on the CNT surface, leading to further oxidation. In addition, the quenching behavior in SDS is found to strongly suppress the optical and Raman signal from metallic nanotube species even at high pH. Displacement of SDS by sodium deoxycholate as a secondary surfactant is able to reverse the effects of protonation of metallic species, whereas hydroxide addition is only partially effective.

Metal-particle-induced enhancement of the photoluminescence from biomolecule-functionalized carbon nanotubes

The effect of metal particles on the photoluminescence (PL) and the Raman spectra of functionalized SWCNTs in aqueous solutions was systematically investigated by studying three different metal particles (gold, cobalt, and nickel) on three different SWCNT suspensions (DNA-, RNA-, and sodium deoxycholate salt (DOC)-functionalized SWCNTs). Substantial enhancement of the PL intensities was observed, while the Raman spectra remained unchanged, after gold, cobalt, or nickel particles were introduced into RNA-SWCNT aqueous suspensions. Almost the same results were obtained after the same metal particles were added to DNA-SWCNT aqueous suspensions. However, both the PL and the Raman spectra did not exhibit any change at all after the same metal particles were introduced into DOC-SWCNT aqueous suspensions. The unusual PL enhancements observed in this work cannot be accounted for by the three well-known mechanisms in the literature: surface-enhanced Raman scattering effect, Förster resonance energy transfer in a rebundling of isolated SWCNTs, and pH changes of the aqueous solutions.

pH- and solute-dependent adsorption of single-wall carbon nanotubes onto hydrogels: mechanistic insights into the metal/semiconductor separation

The gel separation of single-wall carbon nanotubes (SWCNTs) suspended in sodium dodecyl sulfate (SDS) is expected to be one of the most successful methods of large-scale and high-purity separation. Understanding the mechanism of the gel separation helps improve the quality and quantity of separation and reveals the colloidal behaviors of SWCNTs, which reflects their band structures. In this study, we characterize the pH- and solute-dependent adsorption of SWCNTs onto agarose and Sephacryl hydrogels and provide a mechanistic model of the metal/semiconductor separation. The adsorbability of SWCNTs is substantially reduced under acidic pH conditions. Importantly, the pH dependence differs between metallic and semiconducting species; therefore, the adsorbability is related to the band-structure-dependent oxidation of the SWCNTs. Oxidation confers positive charges on SWCNTs, and these charges enhance the electrostatic interactions of the SWCNTs with SDS, thereby leading to the condensation of SDS on the SWCNTs. This increase in SDS density reduces the interactions between the SWCNTs and hydrogels. Under highly basic conditions, such as pH ∼12.5, or in the presence of salts, the adsorption is dissociative because of the condensation of SDS on the SWCNTs through electrostatic screening by counterions. Desorption of the SWCNTs from the hydrogels due to the addition of urea implies a hydrophobic interface between SDS-dispersed SWCNTs and the hydrogels. These results suggest that the metal/semiconductor separation can be explained by the alteration of the interaction between SDS-dispersed SWCNTs and the hydrogels through changes in the conformation of SDS on the SWCNTs depending on the SWCNTs' band structures.

Fuel cell electrocatalyst using polybenzimidazole-modified carbon nanotubes as support materials

Toward the next generation fuel cell systems, the development of a novel electrocatalyst for the polymer electrolyte fuel cell (PEFC) is crucial to overcome the drawbacks of the present electrocatalyst. As a conductive supporting material for the catalyst, carbon nanotubes (CNTs) have emerged as a promising candidate, and many attempts have been carried out to introduce CNT, in place of carbon black. On the other hand, as a polymer electrolyte, polybenzimidazoles (PBIs) have been recognized as a powerful candidate due to the high proton conductivity above 100 °C under non-humid conditions. In 2008, we found that these two materials have a strong physical interaction and form a stable hybrid material, in which the PBIs uniformly wrap the surfaces of the CNTs. Furthermore, PBIs serve as effective binding sites for the formation of platinum (Pt) nanoparticles to fabricate a ternary composite (CNT/PBIs/Pt). In this review article, we summarize the fundamental properties of the CNT/PBIs/Pt and discuss their potential as a new electrocatalyst for the PEFC in comparison with the conventional ones. Furthermore, potential applications of CNT/PBIs including use of the materials for oxygen reduction catalysts and reinforcement of PBI films are summarized.

Surface morphology of hybrids of double-stranded DNA and single-walled carbon nanotubes studied by atomic force microscopy

We examined the formation of hybrids of double-stranded DNA (dsDNA) and single-walled carbon nanotubes (SWNTs), which has not been well investigated yet. In particular, the adsorption of dsDNA onto SWNT produced by chemical vapor deposition (CVD) was examined for the first time. When small amount of dsDNA was mixed with CVD SWNT, well dispersed hybrids with smooth surfaces were observed by atomic force microscopy (AFM). Through a comparison of dsDNA, single-stranded DNA (ssDNA), CVD SWNT, and high-pressure carbon monoxide process (HiPco) SWNT, we found that the surface morphology of the hybrids was independent of the DNA type. Even when sonicated salmon testes DNA, which has a random sequence and length, was employed, smooth surfaces were obtained on the dsDNA-CVD hybrids as well as on the ssDNA-CVD hybrids. The ratio of monodispersed SWNT and bundled SWNT in a dispersion solution was also not affected by the DNA type. In contrast, the quantity of the fabricated hybrids was affected by the types of DNA especially when HiPco SWNT was used. Our results indicated that characteristic features of the dsDNA-CVD hybrids and provide an enhanced understanding of the adsorption mechanism of dsDNA onto SWNTs.

Enhanced cell uptake via non-covalent decollation of a single-walled carbon nanotube-DNA hybrid with polyethylene glycol-grafted poly(l-lysine) labeled with an Alexa-dye and its efficient uptake in a cancer cell

The use of single-walled carbon nanotubes (SWNTs) for biomedical applications is a promising approach due to their unique outer optical stimuli response properties, such as a photothermal response triggered by near-IR laser irradiation. The challenging task in order to realize such applications is to render the SWNTs biocompatible. For this purpose, the stable and homogeneous functionalization of the SWNTs with a molecule carrying a biocompatible group is very important. Here, we describe the design and synthesis of a polyanionic SWNT/DNA hybrid combined with a cationic poly(l-lysine) grafted by polyethylene glycol (PLL-g-PEG) to provide a supramolecular SWNT assembly. A titration experiment revealed that the assembly undergoes an approximately 1 : 1 reaction of the SWNT/DNA with PLL-g-PEG. We also found that SWNT/DNA is coated with PLL-g-PEG very homogeneously that avoids the non-specific binding of proteins on the SWNT surface. The experiment using the obtained supramolecular hybrid was carried out in vitro and a dramatic enhancement in the cell uptake efficiency compared to that of the SWNT/DNA hybrid without PLL-g-PEG was found.