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Shahedi M, Omidi N, Habibi Z, Yousefi M, Brask J, Notash B, Mohammadi M. Biocatalytic stereoselective synthesis of pyrrolidine-2,3-diones containing all-carbon quaternary stereocenters. Org Biomol Chem 2023; 21:2742-2747. [PMID: 36916669 DOI: 10.1039/d2ob02294j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/11/2023]
Abstract
Highly functionalized pyrrolidine-2,3-diones can be synthesized efficiently and stereoselectively under mild conditions using a biocatalytic approach. The reaction led to the formation of new all-carbon quaternary stereocenters from Myceliophthora thermophila laccase (Novozym 51003) catalyzed oxidation of catechols to ortho-quinones and subsequent 1,4-addition with 3-hydroxy-1,5-dihydro-2H-pyrrol-2-ones. The reaction was conducted with various substituents on both reactants, resulting in 13 products in moderate to good yields (42-91%). The same 15 reactions were also tested with K3Fe(CN)6 as a catalyst, but here only one reaction resulted in a product (60% yield).
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Affiliation(s)
- Mansour Shahedi
- Department of Organic Chemistry, Shahid Beheshti University, 1983969411 Tehran, Iran.
| | - Niloofar Omidi
- Department of Organic Chemistry, Shahid Beheshti University, 1983969411 Tehran, Iran.
| | - Zohreh Habibi
- Department of Organic Chemistry, Shahid Beheshti University, 1983969411 Tehran, Iran.
| | - Maryam Yousefi
- Nanobiotechnology Research Center, Avicenna Research Institute, ACECR, Tehran, Iran.
| | - Jesper Brask
- Novozymes A/S, Krogshøjvej 36, 2880 Bagsværd, Copenhagen, Denmark
| | - Behrouz Notash
- Department of Inorganic Chemistry, Shahid Beheshti University, 1983969411 Tehran, Iran
| | - Mehdi Mohammadi
- Bioprocess Engineering Department, Institute of Industrial and Environmental Biotechnology, National Institute of Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran
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2
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Villaescusa L, Hernández I, Azcune L, Rudi A, Mercero JM, Landa A, Oiarbide M, Palomo C. Rigidified Bis(sulfonyl)ethylenes as Effective Michael Acceptors for Asymmetric Catalysis: Application to the Enantioselective Synthesis of Quaternary Hydantoins. J Org Chem 2023; 88:972-987. [PMID: 36630318 PMCID: PMC10013931 DOI: 10.1021/acs.joc.2c02403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
The catalytic, enantio- and diastereoselective addition of hydantoin surrogates II to "rigidified" vinylidene bis(sulfone) reagents is developed, thus overcoming the inability of commonly employed β-substituted vinylic sulfones to react. Adducts are transformed in enantioenriched 5,5-disubstituted hydantoins through hydrolysis and reductive desulfonylation processes providing new structures for eventual bioassays. Density functional theory studies that rationalize the observed reactivity and stereoselectivity trends are also provided.
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Affiliation(s)
- Leire Villaescusa
- Departamento de Química Orgánica I, Facultad de Química, Universidad del País Vasco UPV/EHU, Paseo Manuel Lardizabal 3, Donostia-San Sebastián 20018, Spain
| | - Iker Hernández
- Departamento de Química Orgánica I, Facultad de Química, Universidad del País Vasco UPV/EHU, Paseo Manuel Lardizabal 3, Donostia-San Sebastián 20018, Spain
| | - Laura Azcune
- Departamento de Química Orgánica I, Facultad de Química, Universidad del País Vasco UPV/EHU, Paseo Manuel Lardizabal 3, Donostia-San Sebastián 20018, Spain
| | - Ainhoa Rudi
- Departamento de Química Orgánica I, Facultad de Química, Universidad del País Vasco UPV/EHU, Paseo Manuel Lardizabal 3, Donostia-San Sebastián 20018, Spain
| | - José M Mercero
- Kimika Fakultatea, Euskal Herriko Unibertsitatea (UPV/EHU) & Donostia International Physics Center (DIPC), Donostia 20018, Spain
| | - Aitor Landa
- Departamento de Química Orgánica I, Facultad de Química, Universidad del País Vasco UPV/EHU, Paseo Manuel Lardizabal 3, Donostia-San Sebastián 20018, Spain
| | - Mikel Oiarbide
- Departamento de Química Orgánica I, Facultad de Química, Universidad del País Vasco UPV/EHU, Paseo Manuel Lardizabal 3, Donostia-San Sebastián 20018, Spain
| | - Claudio Palomo
- Departamento de Química Orgánica I, Facultad de Química, Universidad del País Vasco UPV/EHU, Paseo Manuel Lardizabal 3, Donostia-San Sebastián 20018, Spain
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3
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Noda H. Imbuing an Old Heterocycle with the Power of Modern Catalysis: An Isoxazolidin-5-one Story. Chem Pharm Bull (Tokyo) 2021; 69:1160-1169. [PMID: 34853282 DOI: 10.1248/cpb.c21-00750] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Isoxazolidin-5-ones have been regarded as β-amino acid surrogates owing to their labile N-O bond. While many efforts have been devoted to the catalytic enantioselective synthesis of the core of this heterocycle, its further transformation has been less explored, especially in the context of catalysis. This review summarizes the author's research on the development of catalytic reactions using isoxazolidin-5-ones as substrates. Asymmetric catalysis has proven effective for C-C bond formation at the carbonyl α-carbon. Catalytic asymmetric allylation and direct Mannich-type reactions have been developed. Further, the resulting products have been readily converted into the corresponding quaternary β2,2-amino acids. Moreover, isoxazolidin-5-ones have been identified as alkyl nitrene precursors in the presence of a suitable metal catalyst. The generated metallonitrene undergoes either the electrophilic amination of the aromatic ring or aliphatic C-H insertion, affording a series of cyclic β-amino acids. A remarkable difference in chemoselectivity between rhodium and copper alkyl nitrenes has also been demonstrated, highlighting the unique nature of the underexplored reactive intermediates. The various linear and cyclic β-amino acids obtained through the study are likely to find great utility in a broad range of chemical sciences.
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4
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Ren X, Tang L, Shen C, Li H, Wang P, Dong K. Enantioselective Hydroesterificative Cyclization of 1,6-Enynes to Chiral γ-Lactams Bearing a Quaternary Carbon Stereocenter. Org Lett 2021; 23:3561-3566. [PMID: 33908782 DOI: 10.1021/acs.orglett.1c00952] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
A palladium-catalyzed asymmetric hydroesterification-cyclization of 1,6-enynes with CO and alcohol was developed to efficiently prepare a variety of enantioenriched γ-lactams bearing a chiral quaternary carbon center and a carboxylic ester group. The approach featured good to high chemo-, region-, and enantioselectivities, high atom economy, and mild reaction conditions as well as broad substrate scope. The correlation between the multiple selectivities of such process and the N-substitutes of the amide linker in the 1,6-enyne substrate has been depicted by the crystallographic evidence and control experiments.
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Affiliation(s)
- Xinyi Ren
- Chang-Kung Chuang Institute, and Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P.R. China
| | - Lin Tang
- Chang-Kung Chuang Institute, and Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P.R. China
| | - Chaoren Shen
- Chang-Kung Chuang Institute, and Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P.R. China
| | - Huimin Li
- Chang-Kung Chuang Institute, and Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P.R. China
| | - Peng Wang
- Chang-Kung Chuang Institute, and Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P.R. China
| | - Kaiwu Dong
- Chang-Kung Chuang Institute, and Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P.R. China
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5
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Massaro NP, Pierce JG. Stereoselective, Multicomponent Approach to Quaternary Substituted Hydroindole Scaffolds. Org Lett 2020; 22:5079-5084. [PMID: 32610919 DOI: 10.1021/acs.orglett.0c01650] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The Amaryllidaceae alkaloids have been a target of synthesis for decades due to their complex architectures and biological activity. A central feature of these natural product cores is a quaternary substituted hydroindole heterocycle. Building off the foundation of our previous multicomponent approach to highly functionalized pyrrolidinones, herein we report a highly convergent, diastereoselective, multicomponent approach to access the hydroindole cores present within crinine, haemanthamine, pretazettine, and various other bioactive alkaloids. These scaffolds are additionally useful as building blocks for druglike molecules and natural product like library generation.
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Affiliation(s)
- Nicholas P Massaro
- Department of Chemistry, College of Sciences, North Carolina State University, 2620 Yarbrough Drive, Raleigh, North Carolina 27695, United States.,Comparative Medicine Institute, North Carolina State University, Raleigh, North Carolina 27695, United States
| | - Joshua G Pierce
- Department of Chemistry, College of Sciences, North Carolina State University, 2620 Yarbrough Drive, Raleigh, North Carolina 27695, United States.,Comparative Medicine Institute, North Carolina State University, Raleigh, North Carolina 27695, United States
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6
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Noda H, Shibasaki M. Recent Advances in the Catalytic Asymmetric Synthesis of β
2
‐ and β
2,2
‐Amino Acids. European J Org Chem 2019. [DOI: 10.1002/ejoc.201901596] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Hidetoshi Noda
- Institute of Microbial Chemistry (BIKAKEN) 3–14–23 Kamiosaki, Shinagawa‐ku, Tokyo 141–0021 Tokyo Japan
| | - Masakatsu Shibasaki
- Institute of Microbial Chemistry (BIKAKEN) 3–14–23 Kamiosaki, Shinagawa‐ku, Tokyo 141–0021 Tokyo Japan
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7
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Amemiya F, Noda H, Shibasaki M. Lewis Base Assisted Lithium Brønsted Base Catalysis: A New Entry for Catalytic Asymmetric Synthesis of β 2,2-Amino Acids. Chem Pharm Bull (Tokyo) 2019; 67:1046-1049. [PMID: 31341115 DOI: 10.1248/cpb.c19-00569] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A new catalytic system comprising chiral Ag complex and Li aryloxide/bisphosphine oxide is developed for the synthesis of β2,2-amino acids via direct asymmetric Mannich-type reaction of 4-subsituted isoxazolidin-5-ones. The Mannich adduct is a direct precursor of β-peptidic compounds otherwise difficult to obtain.
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8
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Izquierdo J, Demurget N, Landa A, Brinck T, Mercero JM, Dinér P, Oiarbide M, Palomo C. Asymmetric Synthesis of Adjacent Tri- and Tetrasubstituted Carbon Stereocenters: Organocatalytic Aldol Reaction of an Hydantoin Surrogate with Azaarene 2-Carbaldehydes. Chemistry 2019; 25:12431-12438. [PMID: 31318987 DOI: 10.1002/chem.201902817] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Revised: 07/15/2019] [Indexed: 12/13/2022]
Abstract
A bifunctional amine/squaramide catalyst promoted direct aldol addition of an hydantoin surrogate to pyridine 2-carbaldehyde N-oxides to afford adducts bearing two vicinal tertiary/quaternary carbons in high diastereo- and enantioselectivity (d.r. up to >20:1; ee up to 98 %) is reported. Acid hydrolysis of adducts followed by reduction of the N-oxide group yields enantiopure carbinol-tethered quaternary hydantoin-azaarene conjugates with densely functionalized skeletons. DFT studies of the potential energy surface (B3LYP/6-31+G(d)+CPCM (dichloromethane)) of the reaction correlate the activity of different catalysts and support an intramolecular hydrogen-bond-assisted activation of the squaramide moiety in the transition state of the catalytic reaction.
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Affiliation(s)
- June Izquierdo
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
| | - Noémie Demurget
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
| | - Aitor Landa
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
| | - Tore Brinck
- Department of Chemistry, KTH Royal Institute of, Technology, Teknikringen 30, 100 44, Stockholm, Sweden
| | - Jose M Mercero
- Kimika Fakultatea, Euskal Herriko Unibertsitatea, (UPV/EHU) & Donostia International Physics Center (DIPC), Donostia, Spain
| | - Peter Dinér
- Department of Chemistry, KTH Royal Institute of, Technology, Teknikringen 30, 100 44, Stockholm, Sweden
| | - Mikel Oiarbide
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
| | - Claudio Palomo
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
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9
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Romero‐Ibañez J, Cruz‐Gregorio S, Sandoval‐Lira J, Hernández‐Pérez JM, Quintero L, Sartillo‐Piscil F. Transition‐Metal‐Free Deconstructive Lactamization of Piperidines. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201903880] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Julio Romero‐Ibañez
- Centro de Investigación de la Facultad de Ciencias QuímicasBenemérita Universidad Autónoma de Puebla (BUAP) 14 Sur Esq. San Claudio, Col. San Manuel 72570 Puebla México
| | - Silvano Cruz‐Gregorio
- Centro de Investigación de la Facultad de Ciencias QuímicasBenemérita Universidad Autónoma de Puebla (BUAP) 14 Sur Esq. San Claudio, Col. San Manuel 72570 Puebla México
| | - Jacinto Sandoval‐Lira
- Centro de Investigación de la Facultad de Ciencias QuímicasBenemérita Universidad Autónoma de Puebla (BUAP) 14 Sur Esq. San Claudio, Col. San Manuel 72570 Puebla México
| | - Julio M. Hernández‐Pérez
- Centro de Investigación de la Facultad de Ciencias QuímicasBenemérita Universidad Autónoma de Puebla (BUAP) 14 Sur Esq. San Claudio, Col. San Manuel 72570 Puebla México
| | - Leticia Quintero
- Centro de Investigación de la Facultad de Ciencias QuímicasBenemérita Universidad Autónoma de Puebla (BUAP) 14 Sur Esq. San Claudio, Col. San Manuel 72570 Puebla México
| | - Fernando Sartillo‐Piscil
- Centro de Investigación de la Facultad de Ciencias QuímicasBenemérita Universidad Autónoma de Puebla (BUAP) 14 Sur Esq. San Claudio, Col. San Manuel 72570 Puebla México
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10
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Romero-Ibañez J, Cruz-Gregorio S, Sandoval-Lira J, Hernández-Pérez JM, Quintero L, Sartillo-Piscil F. Transition-Metal-Free Deconstructive Lactamization of Piperidines. Angew Chem Int Ed Engl 2019; 58:8867-8871. [PMID: 30998837 DOI: 10.1002/anie.201903880] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Indexed: 12/19/2022]
Abstract
One of the major challenges in organic synthesis is the activation or deconstructive functionalization of unreactive C(sp3 )-C(sp3 ) bonds, which requires using transition or precious metal catalysts. We present here an alternative: the deconstructive lactamization of piperidines without using transition metal catalysts. To this end, we use 3-alkoxyamino-2-piperidones, which were prepared from piperidines through a dual C(sp3 )-H oxidation, as transitory intermediates. Experimental and theoretical studies confirm that this unprecedented lactamization occurs in a tandem manner involving an oxidative deamination of 3-alkoxyamino-2-piperidones to 3-keto-2-piperidones, followed by a regioselective Baeyer-Villiger oxidation to give N-carboxyanhydride intermediates, which finally undergo a spontaneous and concerted decarboxylative intramolecular translactamization.
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Affiliation(s)
- Julio Romero-Ibañez
- Centro de Investigación de la Facultad de Ciencias Químicas, Benemérita Universidad Autónoma de Puebla (BUAP), 14 Sur Esq. San Claudio, Col. San Manuel, 72570, Puebla, México
| | - Silvano Cruz-Gregorio
- Centro de Investigación de la Facultad de Ciencias Químicas, Benemérita Universidad Autónoma de Puebla (BUAP), 14 Sur Esq. San Claudio, Col. San Manuel, 72570, Puebla, México
| | - Jacinto Sandoval-Lira
- Centro de Investigación de la Facultad de Ciencias Químicas, Benemérita Universidad Autónoma de Puebla (BUAP), 14 Sur Esq. San Claudio, Col. San Manuel, 72570, Puebla, México
| | - Julio M Hernández-Pérez
- Centro de Investigación de la Facultad de Ciencias Químicas, Benemérita Universidad Autónoma de Puebla (BUAP), 14 Sur Esq. San Claudio, Col. San Manuel, 72570, Puebla, México
| | - Leticia Quintero
- Centro de Investigación de la Facultad de Ciencias Químicas, Benemérita Universidad Autónoma de Puebla (BUAP), 14 Sur Esq. San Claudio, Col. San Manuel, 72570, Puebla, México
| | - Fernando Sartillo-Piscil
- Centro de Investigación de la Facultad de Ciencias Químicas, Benemérita Universidad Autónoma de Puebla (BUAP), 14 Sur Esq. San Claudio, Col. San Manuel, 72570, Puebla, México
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11
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Boratyński PJ, Zielińska-Błajet M, Skarżewski J. Cinchona Alkaloids-Derivatives and Applications. THE ALKALOIDS. CHEMISTRY AND BIOLOGY 2019; 82:29-145. [PMID: 30850032 DOI: 10.1016/bs.alkal.2018.11.001] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Major Cinchona alkaloids quinine, quinidine, cinchonine, and cinchonidine are available chiral natural compounds (chiral pool). Unlike many other natural products, these alkaloids are available in multiple diastereomeric forms which are separated on an industrial scale. The introduction discusses in short conformational equilibria, traditional separation scheme, biosynthesis, and de novo chemical syntheses. The second section concerns useful chemical applications of the alkaloids as chiral recognition agents and effective chiral catalysts. Besides the Sharpless ethers and quaternary ammonium salts (chiral PTC), the most successful bifunctional organocatalysts are based on 9-amino derivatives: thioureas and squaramides. The third section reports the main transformations of Cinchona alkaloids. This covers reactions of the 9-hydroxyl group with the retention or inversion of configuration. Specific Cinchona rearrangements enlarging [2.2.2]bicycle of quinuclidine to [3.2.2] products are connected to the 9-OH substitution. The syntheses of numerous esterification and etherification products are described, including many examples of bi-Cinchona alkaloid ethers. Further derivatives comprise 9-N-substituted compounds. The amino group is introduced via an azido function with the inversion of configuration at the stereogenic center C9. The 9-epi-amino-alkaloids provide imines, amides, imides, thioureas, and squaramides. The syntheses of 9-carbon-, 9-sulfur-, and 9-selenium-substituted derivatives are discussed. Oxidation of the hydroxyl group of any alkaloid gives ketones, which can be selectively reduced, reacted with Grignard reagents, or subjected to the Corey-Chaykovsky reaction. The alkaloids were also partially degraded by splitting C4'-C9 or N1-C8 bonds. In order to immobilize Cinchona alkaloids the transformations of the 3-vinyl group were often exploited. Finally, miscellaneous functionalizations of quinuclidine, quinoline, and examples of various metal complexes of the alkaloids are considered.
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Affiliation(s)
| | | | - Jacek Skarżewski
- Department of Organic Chemistry, Wrocław University of Technology, Wrocław, Poland.
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Mattio L, Musso L, Scaglioni L, Pinto A, Martino PA, Dallavalle S. Synthesis of a leopolic acid-inspired tetramic acid with antimicrobial activity against multidrug-resistant bacteria. Beilstein J Org Chem 2018; 14:2482-2487. [PMID: 30344771 PMCID: PMC6178305 DOI: 10.3762/bjoc.14.224] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2018] [Accepted: 09/04/2018] [Indexed: 02/05/2023] Open
Abstract
The increasing emergence of multidrug-resistant pathogens is one of the biggest threats to human health and food security. The discovery of new antibacterials, and in particular the finding of new scaffolds, is an imperative goal to stay ahead of the evolution of antibiotic resistance. Herein we report the synthesis of a 3-decyltetramic acid analogue of the ureido dipeptide natural antibiotic leopolic acid A. The key step in the synthetic strategy is an intramolecular Lacey–Dieckmann cyclization reaction of a linear precursor to obtain the desired 3-alkyl-substituted tetramic acid core. The synthesized analogue is more effective than the parent leopolic acid A against Gram-positive (Staphylococcus pseudintermedius) and Gram-negative (E. coli) bacteria (MIC 8 µg/mL and 64 µg/mL, respectively). Interestingly, the compound shows a significant activity against Staphylococcus pseudintermedius strains expressing a multidrug-resistant phenotype (average MIC 32 µg/mL on 30 strains tested). These results suggest that this molecule can be considered a promising starting point for the development of a novel class of antibacterial agents active also against resistant strains.
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Affiliation(s)
- Luce Mattio
- Department of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, I-20133 Milano, Italy
| | - Loana Musso
- Department of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, I-20133 Milano, Italy
| | - Leonardo Scaglioni
- Department of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, I-20133 Milano, Italy
| | - Andrea Pinto
- Department of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, I-20133 Milano, Italy
| | - Piera Anna Martino
- Department of Veterinary Medicine - Microbiology and Immunology, Università degli Studi di Milano, via Celoria 10, I-20133 Milano, Italy
| | - Sabrina Dallavalle
- Department of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, I-20133 Milano, Italy
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13
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Yu JS, Noda H, Shibasaki M. Exploiting β-Amino Acid Enolates in Direct Catalytic Diastereo- and Enantioselective C−C Bond-Forming Reactions. Chemistry 2018; 24:15796-15800. [DOI: 10.1002/chem.201804346] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2018] [Indexed: 11/10/2022]
Affiliation(s)
- Jin-Sheng Yu
- Institute of Microbial Chemistry (BIKAKEN), Tokyo; 3-14-23 Kamiosaki Shinagawa-ku Tokyo 141-0021 Japan
| | - Hidetoshi Noda
- Institute of Microbial Chemistry (BIKAKEN), Tokyo; 3-14-23 Kamiosaki Shinagawa-ku Tokyo 141-0021 Japan
| | - Masakatsu Shibasaki
- Institute of Microbial Chemistry (BIKAKEN), Tokyo; 3-14-23 Kamiosaki Shinagawa-ku Tokyo 141-0021 Japan
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14
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Li G, Garcia-Borràs M, Furst MJLJ, Ilie A, Fraaije MW, Houk KN, Reetz MT. Overriding Traditional Electronic Effects in Biocatalytic Baeyer-Villiger Reactions by Directed Evolution. J Am Chem Soc 2018; 140:10464-10472. [PMID: 30044629 PMCID: PMC6314816 DOI: 10.1021/jacs.8b04742] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Controlling the regioselectivity of Baeyer-Villiger (BV) reactions remains an ongoing issue in organic chemistry, be it by synthetic catalysts or enzymes of the type Baeyer-Villiger monooxygenases (BVMOs). Herein, we address the challenging problem of switching normal to abnormal BVMO regioselectivity by directed evolution using three linear ketones as substrates, which are not structurally biased toward abnormal reactivity. Upon applying iterative saturation mutagenesis at sites lining the binding pocket of the thermostable BVMO from Thermocrispum municipale DSM 44069 (TmCHMO) and using 4-phenyl-2-butanone as substrate, the regioselectivity was reversed from 99:1 (wild-type enzyme in favor of the normal product undergoing 2-phenylethyl migration) to 2:98 in favor of methyl migration when applying the best mutant. This also stands in stark contrast to the respective reaction using the synthetic reagent m-CPBA, which provides solely the normal product. Reversal of regioselectivity was also achieved in the BV reaction of two other linear ketones. Kinetic parameters and melting temperatures revealed that most of the evolved mutants retained catalytic activity, as well as thermostability. In order to shed light on the origin of switched regioselectivity in reactions of 4-phenyl-2-butanone and phenylacetone, extensive QM/MM and MD simulations were performed. It was found that the mutations introduced by directed evolution induce crucial changes in the conformation of the respective Criegee intermediates and transition states in the binding pocket of the enzyme. In mutants that destabilize the normally preferred migration transition state, a reversal of regioselectivity is observed. This conformational control of regioselectivity overrides electronic control, which normally causes preferential migration of the group that is best able to stabilize positive charge. The results can be expected to aid future protein engineering of BVMOs.
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Affiliation(s)
- Guangyue Li
- State Key Laboratory for Biology of Plant Diseases and Insect Pests/Key Laboratory of Control of Biological Hazard Factors (Plant Origin) for Agriproduct Quality and Safety, Ministry of Agriculture, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100081, China
- Max-Planck-Institut fürKohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim, Germany
- Department of Chemistry, Philipps-University, Hans-Meerwein-Strasse 4, 35032 Marburg, Germany
| | - Marc Garcia-Borràs
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, United States
| | - Maximilian J. L. J. Furst
- Molecular Enzymology Group, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Adriana Ilie
- Max-Planck-Institut fürKohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim, Germany
- Department of Chemistry, Philipps-University, Hans-Meerwein-Strasse 4, 35032 Marburg, Germany
| | - Marco W. Fraaije
- Molecular Enzymology Group, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - K. N. Houk
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, United States
| | - Manfred T. Reetz
- Max-Planck-Institut fürKohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim, Germany
- Department of Chemistry, Philipps-University, Hans-Meerwein-Strasse 4, 35032 Marburg, Germany
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15
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Schäfer B, Schmidtmann M, Christoffers J. Aminodecalone Scaffolds - Enantioselective Synthesis, Indole and Quinoline Annulation. European J Org Chem 2018. [DOI: 10.1002/ejoc.201800931] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Benjamin Schäfer
- Institut für Chemie; Carl von Ossietzky Universität Oldenburg; 26111 Oldenburg Germany
| | - Marc Schmidtmann
- Institut für Chemie; Carl von Ossietzky Universität Oldenburg; 26111 Oldenburg Germany
| | - Jens Christoffers
- Institut für Chemie; Carl von Ossietzky Universität Oldenburg; 26111 Oldenburg Germany
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16
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Wang C, Ge S. Versatile Cobalt-Catalyzed Enantioselective Entry to Boryl-Functionalized All-Carbon Quaternary Stereogenic Centers. J Am Chem Soc 2018; 140:10687-10690. [DOI: 10.1021/jacs.8b06814] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Chao Wang
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Shaozhong Ge
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
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17
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Echave H, Bastida I, López R, Palomo C. Bifunctional Brønsted Base Catalyzed Mannich Reaction of β‐Alkoxy α‐Keto Amides: Stereocontrolled Entry to Functionalized Amino Diols. Chemistry 2018; 24:11554-11558. [DOI: 10.1002/chem.201802550] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2018] [Revised: 06/18/2018] [Indexed: 11/10/2022]
Affiliation(s)
- Haizea Echave
- Departamento de Química Orgánica I, Facultad de QuímicaUniversidad del País Vasco Manuel de Lardizabal 3 20018 San Sebastián Spain
| | - Iñaki Bastida
- Departamento de Química Orgánica I, Facultad de QuímicaUniversidad del País Vasco Manuel de Lardizabal 3 20018 San Sebastián Spain
| | - Rosa López
- Departamento de Química Orgánica I, Facultad de QuímicaUniversidad del País Vasco Manuel de Lardizabal 3 20018 San Sebastián Spain
| | - Claudio Palomo
- Departamento de Química Orgánica I, Facultad de QuímicaUniversidad del País Vasco Manuel de Lardizabal 3 20018 San Sebastián Spain
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18
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Izquierdo J, Etxabe J, Duñabeitia E, Landa A, Oiarbide M, Palomo C. Enantioselective Synthesis of 5,5-Disubstituted Hydantoins by Brønsted Base/H-Bond Catalyst Assisted Michael Reactions of a Design Template. Chemistry 2018; 24:7217-7227. [PMID: 29575281 DOI: 10.1002/chem.201800506] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2018] [Indexed: 01/25/2023]
Abstract
A new method for the enantioselective synthesis of 5,5-disubstituted (quaternary) hydantoins was developed on the basis of an organocatalytic Michael reaction approach involving the use of 2-benzylthio-3,5-dihydroimidazol-4-ones as key hydantoin surrogates. The method is general with respect to the substitution pattern at the hydantoin N1 (alkyl, aryl, acyl), N3 (aryl), and C5 (linear/branched alkyl, aryl) positions and affords essentially single diastereomeric products with enantioselectivities higher than 95 % ee in most cases. Among the bifunctional Brønsted base/H-bond catalysts examined, a known squaramide-tertiary amine catalyst and a newly prepared squaramide-tertiary amine catalyst provide the highest selectivity so far with either nitroolefins or vinyl ketones as the acceptor components. Kinetic measurements support a first-order rate dependence on both reaction partners, the donor template and the Michael acceptor, whereas competitive 1 H NMR spectroscopy experiments reveal the high ability of the template for catalyst binding.
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Affiliation(s)
- Joseba Izquierdo
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
| | - Julen Etxabe
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
| | - Eider Duñabeitia
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
| | - Aitor Landa
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
| | - Mikel Oiarbide
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
| | - Claudio Palomo
- Departamento de Química Orgánica I, Universidad del País Vasco UPV/EHU, Manuel Lardizabal 3, 20018, San Sebastián, Spain
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19
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Construction of Isoxazolidin-5-ones with a Tetrasubstituted Carbon Center: Enantioselective Conjugate Addition Mediated by Phase-Transfer Catalysis. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201800009] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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20
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Yu J, Noda H, Shibasaki M. Quaternary β
2,2
‐Amino Acids: Catalytic Asymmetric Synthesis and Incorporation into Peptides by Fmoc‐Based Solid‐Phase Peptide Synthesis. Angew Chem Int Ed Engl 2017; 57:818-822. [DOI: 10.1002/anie.201711143] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2017] [Indexed: 11/09/2022]
Affiliation(s)
- Jin‐Sheng Yu
- Institute of Microbial Chemistry (BIKAKEN), Tokyo 3-14-23 Kamiosaki, Shinagawa-ku Tokyo 141-0021 Japan
| | - Hidetoshi Noda
- Institute of Microbial Chemistry (BIKAKEN), Tokyo 3-14-23 Kamiosaki, Shinagawa-ku Tokyo 141-0021 Japan
| | - Masakatsu Shibasaki
- Institute of Microbial Chemistry (BIKAKEN), Tokyo 3-14-23 Kamiosaki, Shinagawa-ku Tokyo 141-0021 Japan
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21
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Yu J, Noda H, Shibasaki M. Quaternary β
2,2
‐Amino Acids: Catalytic Asymmetric Synthesis and Incorporation into Peptides by Fmoc‐Based Solid‐Phase Peptide Synthesis. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201711143] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Jin‐Sheng Yu
- Institute of Microbial Chemistry (BIKAKEN), Tokyo 3-14-23 Kamiosaki, Shinagawa-ku Tokyo 141-0021 Japan
| | - Hidetoshi Noda
- Institute of Microbial Chemistry (BIKAKEN), Tokyo 3-14-23 Kamiosaki, Shinagawa-ku Tokyo 141-0021 Japan
| | - Masakatsu Shibasaki
- Institute of Microbial Chemistry (BIKAKEN), Tokyo 3-14-23 Kamiosaki, Shinagawa-ku Tokyo 141-0021 Japan
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22
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Luo Y, Xie KX, Yue DF, Zhang XM, Xu XY, Yuan WC. Organocatalytic asymmetric Michael addition of pyrazoleamides to β -phthalimidonitroethene. Tetrahedron 2017. [DOI: 10.1016/j.tet.2017.09.019] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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23
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Odriozola A, Oiarbide M, Palomo C. Enantioselective Synthesis of Quaternary Δ4
- and Δ5
-Dehydroprolines Based on a Two-Step Formal [3+2] Cycloaddition of α-Aryl and α-Alkyl Isocyano(thio)acetates with Vinyl Ketones. Chemistry 2017; 23:12758-12762. [DOI: 10.1002/chem.201703526] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2017] [Indexed: 01/14/2023]
Affiliation(s)
- Amaiur Odriozola
- Departamento de Química Orgánica I; Universidad del País Vasco UPV/EHU; Manuel Lardizabal 3 20018 San Sebastián Spain
| | - Mikel Oiarbide
- Departamento de Química Orgánica I; Universidad del País Vasco UPV/EHU; Manuel Lardizabal 3 20018 San Sebastián Spain
| | - Claudio Palomo
- Departamento de Química Orgánica I; Universidad del País Vasco UPV/EHU; Manuel Lardizabal 3 20018 San Sebastián Spain
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