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Yoshimori S, Jin RH. Chirooptical 2,2'-Dimethoxybiphenyl Crystals Generated From Suzuki-Miyaura Coupling Reaction Catalyzed by Pd-Loaded Chiral Silica. Chirality 2025; 37:e70026. [PMID: 39933902 DOI: 10.1002/chir.70026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2024] [Revised: 02/03/2025] [Accepted: 02/03/2025] [Indexed: 02/13/2025]
Abstract
In this work, we report a one-pot approach that combines crystal ripening with the Suzuki-Miyaura coupling reaction. We investigated the reaction between 2-methoxyphenyl bromide and 2-methoxyphenylboronic acid, catalyzed by a series of Pd-loaded chiral optical (D- or L-) and racemic (DL-) silica/polyethyleneimine (PEI) systems, which produced crystalline 2,2'-dimethoxybiphenyl (DMB). The silica used as a catalyst was prepared using our previously established method, in which chirality was imparted to the silica through catalytic templates composed of polyethyleneimine (PEI) and tartaric acid. Both enantiopure (D- or L-; 100% ee) and racemic (DL-; 0% ee) tartaric acid-mediated silica, after tartaric acid removal and palladium (Pd) loading, exhibited similar catalytic activities, leading to the quantitative precipitation of 2,2'-dimethoxybiphenyl in a water/ethanol (1:1 by volume) medium. Interestingly, the 2,2'-dimethoxybiphenyl crystals formed and ripened in the presence of Pd-loaded chiral D- and L-silica/PEI exhibited octahedral morphology and displayed remarkable chiroptical activity with a mirror-image relationship. This represents a novel example of using chiral Pd-loaded silica to synthesize axially chiral biphenyl in crystalline form.
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Affiliation(s)
- Shunpei Yoshimori
- Department of Applied Chemistry, Faculty of Chemistry and Biochemistry, Kanagawa University, Yokohama, Japan
| | - Ren-Hua Jin
- Department of Applied Chemistry, Faculty of Chemistry and Biochemistry, Kanagawa University, Yokohama, Japan
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2
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Quaranta C, d'Anciães Almeida Silva I, Moos S, Bartalucci E, Hendrickx L, Fahl BMD, Pasqualini C, Puccetti F, Zobel M, Bolm C, Wiegand T. Molecular Recognition in Mechanochemistry: Insights from Solid-State NMR Spectroscopy. Angew Chem Int Ed Engl 2024; 63:e202410801. [PMID: 39007361 DOI: 10.1002/anie.202410801] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2024] [Revised: 07/11/2024] [Accepted: 07/12/2024] [Indexed: 07/16/2024]
Abstract
Molecular-recognition events are highly relevant in biology and chemistry. In the present study, we investigated such processes in the solid state under mechanochemical conditions using the formation of racemic phases upon reacting enantiopure entities as example. As test systems, α-(trifluoromethyl)lactic acid (TFLA) and the amino acids serine and alanine were used. The effects of ball-milling and resonant acoustic mixing (RAM) on the formation of racemic phases were probed by using solid-state Nuclear Magnetic Resonance (NMR) spectroscopy. In a mixer mill, a highly efficient and fast racemic phase formation occurred for both TFLA and the two amino acids. RAM led to the racemic phase for TFLA also, and this process was facilitated upon employing pre-milled enantiopure entities. In contrast, under comparable conditions RAM did not result in the formation of racemic phases for serine and alanine.
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Affiliation(s)
- Calogero Quaranta
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany
| | | | - Sven Moos
- Max Planck Institute for Chemical Energy Conversion, Stiftstr. 34-36, 45470, Mülheim/Ruhr, Germany
- Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 2, 52074, Aachen, Germany
| | - Ettore Bartalucci
- Max Planck Institute for Chemical Energy Conversion, Stiftstr. 34-36, 45470, Mülheim/Ruhr, Germany
- Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 2, 52074, Aachen, Germany
| | - Leeroy Hendrickx
- Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 2, 52074, Aachen, Germany
| | - Benjamin M D Fahl
- Institute of Crystallography, RWTH Aachen University, Jägerstr. 17-19, 52066, Aachen, Germany
| | - Claudia Pasqualini
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany
- Department of Biotechnology, Chemistry and Pharmacy, University of Siena, via Aldo Moro, 2, I-53100, Siena, Italy
| | - Francesco Puccetti
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany
| | - Mirijam Zobel
- Institute of Crystallography, RWTH Aachen University, Jägerstr. 17-19, 52066, Aachen, Germany
| | - Carsten Bolm
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany
| | - Thomas Wiegand
- Max Planck Institute for Chemical Energy Conversion, Stiftstr. 34-36, 45470, Mülheim/Ruhr, Germany
- Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 2, 52074, Aachen, Germany
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3
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Duan Y, Che S. Chiral Mesostructured Inorganic Materials with Optical Chiral Response. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023; 35:e2205088. [PMID: 36245314 DOI: 10.1002/adma.202205088] [Citation(s) in RCA: 30] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2022] [Revised: 09/15/2022] [Indexed: 06/16/2023]
Abstract
Fabricating chiral inorganic materials and revealing their unique quantum confinement-determined optical chiral responses are crucial tasks in the multidisciplinary fields of chemistry, physics, and biology. The field of chiral mesostructured inorganic materials started from the synthesis of individual nanocrystals and evolved to include their assembly from metals, semiconductors, ceramics, and inorganic salts endowed with various chiral structures ranging from atomic to micron scales. This tutorial review highlights the recent research on chiral mesostructured inorganic materials, especially the novel expression of mesostructured chirality and endowed optical chiral response, and it may inspire us with new strategies for the design of chiral inorganic materials and new opportunities beyond the traditional applications of chirality. Fabrication methods for chiral mesostructured inorganic materials are classified according to chirality type, scale, and symmetry-breaking mechanism. Special attention is given to highlight systems with original discoveries, exceptional phenomena, or unique mechanisms of optical chiral response for left- and right-handedness.
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Affiliation(s)
- Yingying Duan
- School of Chemical Science and Engineering, Tongji University, 1239 Siping Road, Shanghai, 200092, P. R. China
| | - Shunai Che
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, State Key Laboratory of Matrix Composite, Shanghai Key Laboratory for Molecular Engineering of Chiral Drugs, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai, 200240, P. R. China
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4
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Arango-Restrepo A, Barragán D, Rubi JM. Variations in activation energy and nuclei size during nucleation explain chiral symmetry breaking. Phys Chem Chem Phys 2023; 25:29032-29041. [PMID: 37860883 DOI: 10.1039/d3cp03220e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2023]
Abstract
We show that variations in enantiomer nuclei size and activation energy during the nucleation stage of crystallization are responsible for the chiral symmetry breaking resulting in excess of one of the possible enantiomers with respect to the other. By understanding the crystallisation process as a non-equilibrium self-assembly process, we quantify the enantiomeric excess through the probability distribution of the nuclei size and activation energy variations which are obtained from the free energy involved in the nucleation stage of crystallisation. We validate our theory by comparing it to Kondepudi et al. previous experimental work on sodium chlorate crystallisation. The results demonstrate that the self-assembly of enantiomeric crystals provides an explanation for chiral symmetry breaking. These findings could have practical applications for improving the production of enantiopure drugs in the pharmaceutical industry, as well as for enhancing our understanding of the origins of life since enantiomeric amino acids and monosaccharides are the building blocks of life.
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Affiliation(s)
- A Arango-Restrepo
- Departament de Física de la Matèria Condensada, Universitat de Barcelona, Avinguda Diagonal 647, 08028 Barcelona, Spain.
| | - D Barragán
- Escuela de Química, Universidad Nacional de Colombia, Carrera 65 No 59A-110, Bloque 16, Núcleo El Volador, 050034 Medellín, Colombia
| | - J M Rubi
- Departament de Física de la Matèria Condensada, Universitat de Barcelona, Avinguda Diagonal 647, 08028 Barcelona, Spain.
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5
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Arango-Restrepo A, Arteaga O, Barragán D, Rubi JM. Chiral symmetry breaking induced by energy dissipation. Phys Chem Chem Phys 2023; 25:9238-9248. [PMID: 36919512 DOI: 10.1039/d2cp05939h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2023]
Abstract
Spontaneous chiral symmetry breaking is observed in a wide variety of systems on very different scales, from the subatomic to the cosmological. Despite its generality and importance for a large number of applications, its origin is still a matter of debate. It has been shown that the existence of a difference between the energies of the intermediate states of optical enantiomers leads to disparate production rates and thus to symmetry breaking. However, it is still unclear why this occurs. We measured for the first time the optical rotation angle of NaClO3 enantiomeric crystals in solution during their formation and found that the amount of energy needed to induce the enantiomeric excess is exactly the same as the energy dissipated per mole of solid salt calculated from the entropy production obtained from the proposed model. The irreversible nature of the process leading to entropy production thus explains the chiral symmetry breaking in the salt crystals studied. The proposed method could be used to explain the formation of self-organised structures generated by self-assembly of enantiomers arising from chiral symmetry breaking, such as those emerging in the production of advanced materials and synthetic biological tissues.
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Affiliation(s)
- A Arango-Restrepo
- Departament de Física de la Matèria Condensada, Universitat de Barcelona, Avinguda Diagonal 647, 08028 Barcelona, Spain.
| | - O Arteaga
- Departament de Física Aplicada, Universitat de Barcelona, Avinguda Diagonal 647, 08028 Barcelona, Spain
| | - D Barragán
- Escuela de Química, Universidad Nacional de Colombia, Carrera 65 No 59A-110, Bloque 16, Núcleo El Volador, 050034 Medellín, Colombia
| | - J M Rubi
- Departament de Física de la Matèria Condensada, Universitat de Barcelona, Avinguda Diagonal 647, 08028 Barcelona, Spain.
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6
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Saito T, Kajitani T, Yagai S. Amplification of Molecular Asymmetry during the Hierarchical Self-Assembly of Foldable Azobenzene Dyads into Nanotoroids and Nanotubes. J Am Chem Soc 2023; 145:443-454. [PMID: 36574732 DOI: 10.1021/jacs.2c10631] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
The amplification of molecular asymmetry through self-assembly is a phenomenon that not only comprehends the origin of homochirality in nature but also produces chiroptically active functional materials from molecules with minimal enantiomeric purity. Understanding how molecular asymmetry can be transferred and amplified into higher-order structures in a hierarchical self-assembly system is important but still unexplored. Herein, we present an intriguing example of the amplification of molecular asymmetry in hierarchically self-assembled nanotubes that feature discrete and isolatable toroidal intermediates. The hierarchical self-assembly is initiated via asymmetric intramolecular folding of scissor-shaped azobenzene dyads furnished with chiral side chains. When scalemic mixtures of the enantiomers are dissolved in a non-polar solvent and cooled to 20 °C, single-handed nanotoroids are formed, as confirmed using atomic force microscopy and circular dichroism analyses. A strong majority-rules effect at the nanotoroid level is observed and can be explained by a low mismatch penalty and a high helix-reversal penalty. The single-handed nanotoroids stack upon cooling to 0 °C to exclusively afford their respective single-handed nanotubes. Thus, the same degree of amplification of molecular asymmetry is realized at the nanotube level. The internal packing efficiency of molecules within nanotubes prepared from the pure enantiomers or their scalemic mixtures is likely different, as suggested by the absence of higher-order structure (supercoil) formation in the latter. X-ray diffraction analysis of the anisotropically oriented nanotube films revealed looser molecular packing within the scalemic nanotubes, which clearly reflects the lower enantiomeric purity of their internal chiral side chains.
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Affiliation(s)
- Takuho Saito
- Division of Advanced Science and Engineering, Graduate School of Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
| | - Takashi Kajitani
- Open Facility development office, Open Facility Center, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama 226-8503, Japan
| | - Shiki Yagai
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan.,Institute for Advanced Academic Research (IAAR), Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
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7
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Sallembien Q, Bouteiller L, Crassous J, Raynal M. Possible chemical and physical scenarios towards biological homochirality. Chem Soc Rev 2022; 51:3436-3476. [PMID: 35377372 DOI: 10.1039/d1cs01179k] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The single chirality of biological molecules in terrestrial biology raises more questions than certitudes about its origin. The emergence of biological homochirality (BH) and its connection with the appearance of life have elicited a large number of theories related to the generation, amplification and preservation of a chiral bias in molecules of life under prebiotically relevant conditions. However, a global scenario is still lacking. Here, the possibility of inducing a significant chiral bias "from scratch", i.e. in the absence of pre-existing enantiomerically-enriched chemical species, will be considered first. It includes phenomena that are inherent to the nature of matter itself, such as the infinitesimal energy difference between enantiomers as a result of violation of parity in certain fundamental interactions, and physicochemical processes related to interactions between chiral organic molecules and physical fields, polarized particles, polarized spins and chiral surfaces. The spontaneous emergence of chirality in the absence of detectable chiral physical and chemical sources has recently undergone significant advances thanks to the deracemization of conglomerates through Viedma ripening and asymmetric auto-catalysis with the Soai reaction. All these phenomena are commonly discussed as plausible sources of asymmetry under prebiotic conditions and are potentially accountable for the primeval chiral bias in molecules of life. Then, several scenarios will be discussed that are aimed to reflect the different debates about the emergence of BH: extra-terrestrial or terrestrial origin (where?), nature of the mechanisms leading to the propagation and enhancement of the primeval chiral bias (how?) and temporal sequence between chemical homochirality, BH and life emergence (when?). Intense and ongoing theories regarding the emergence of optically pure molecules at different moments of the evolution process towards life, i.e. at the levels of building blocks of Life, of the instructed or functional polymers, or even later at the stage of more elaborated chemical systems, will be critically discussed. The underlying principles and the experimental evidence will be commented for each scenario with particular attention on those leading to the induction and enhancement of enantiomeric excesses in proteinogenic amino acids, natural sugars, and their intermediates or derivatives. The aim of this review is to propose an updated and timely synopsis in order to stimulate new efforts in this interdisciplinary field.
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Affiliation(s)
- Quentin Sallembien
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
| | - Laurent Bouteiller
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
| | - Jeanne Crassous
- Univ Rennes, CNRS, Institut des Sciences Chimiques de Rennes, ISCR-UMR 6226, F-35000 Rennes, France.
| | - Matthieu Raynal
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
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8
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Joseph V, Levine M. Ronald C.D. Breslow (1931-2017): A career in review. Bioorg Chem 2021; 115:104868. [PMID: 34523507 DOI: 10.1016/j.bioorg.2021.104868] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 03/23/2021] [Indexed: 11/26/2022]
Abstract
Reviewed herein are key research accomplishments of Professor Ronald Charles D. Breslow (1931-2017) throughout his more than 60 year research career. These accomplishments span a wide range of topics, most notably physical organic chemistry, medicinal chemistry, and bioorganic chemistry. These topics are reviewed, as are topics of molecular electronics and origin of chirality, which combine to make up the bulk of this review. Also reviewed briefly are Breslow's contributions to the broader chemistry profession, including his work for the American Chemical Society and his work promoting gender equity. Throughout the article, efforts are made to put Breslow's accomplishments in the context of other work being done at the time, as well as to include subsequent iterations and elaborations of the research.
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Affiliation(s)
- Vincent Joseph
- Department of Chemical Sciences, Ariel University, Israel
| | - Mindy Levine
- Department of Chemical Sciences, Ariel University, Israel.
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9
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Malerz S, Mudryk K, Tomaník L, Stemer D, Hergenhahn U, Buttersack T, Trinter F, Seidel R, Quevedo W, Goy C, Wilkinson I, Thürmer S, Slavíček P, Winter B. Following in Emil Fischer's Footsteps: A Site-Selective Probe of Glucose Acid-Base Chemistry. J Phys Chem A 2021; 125:6881-6892. [PMID: 34328745 PMCID: PMC8381351 DOI: 10.1021/acs.jpca.1c04695] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2021] [Revised: 07/14/2021] [Indexed: 12/27/2022]
Abstract
Liquid-jet photoelectron spectroscopy was applied to determine the first acid dissociation constant (pKa) of aqueous-phase glucose while simultaneously identifying the spectroscopic signature of the respective deprotonation site. Valence spectra from solutions at pH values below and above the first pKa reveal a change in glucose's lowest ionization energy upon the deprotonation of neutral glucose and the subsequent emergence of its anionic counterpart. Site-specific insights into the solution-pH-dependent molecular structure changes are also shown to be accessible via C 1s photoelectron spectroscopy. The spectra reveal a considerably lower C 1s binding energy of the carbon site associated with the deprotonated hydroxyl group. The occurrence of photoelectron spectral fingerprints of cyclic and linear glucose prior to and upon deprotonation are also discussed. The experimental data are interpreted with the aid of electronic structure calculations. Our findings highlight the potential of liquid-jet photoelectron spectroscopy to act as a site-selective probe of the molecular structures that underpin the acid-base chemistry of polyprotic systems with relevance to environmental chemistry and biochemistry.
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Affiliation(s)
- Sebastian Malerz
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Karen Mudryk
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Lukáš Tomaník
- Department
of Physical Chemistry, University of Chemistry
and Technology, Technická 5, Prague 6 16628, Czech Republic
| | - Dominik Stemer
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Uwe Hergenhahn
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Tillmann Buttersack
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Florian Trinter
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
- Institut
für Kernphysik, Goethe-Universität, Max-von-Laue-Straße 1, 60438 Frankfurt am Main, Germany
| | - Robert Seidel
- Operando
Interfacial Photochemistry, Helmholtz-Zentrum
Berlin für Materialien und Energie, Albert-Einstein-Straße 15, 12489 Berlin, Germany
- Institut
für Chemie, Humboldt-Universität
zu Berlin, Brook-Taylor-Str.
2, 12489 Berlin, Germany
| | - Wilson Quevedo
- Operando
Interfacial Photochemistry, Helmholtz-Zentrum
Berlin für Materialien und Energie, Albert-Einstein-Straße 15, 12489 Berlin, Germany
| | - Claudia Goy
- Centre for
Molecular Water Science (CMWS), Photon Science, Deutsches Elektronen-Synchrotron (DESY), Notkestraße 85, 22607 Hamburg, Germany
| | - Iain Wilkinson
- Department
of Locally-Sensitive & Time-Resolved Spectroscopy, Helmholtz-Zentrum Berlin für Materialien und
Energie, Hahn-Meitner-Platz
1, 14109 Berlin, Germany
| | - Stephan Thürmer
- Department
of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto 606-8502, Japan
| | - Petr Slavíček
- Department
of Physical Chemistry, University of Chemistry
and Technology, Technická 5, Prague 6 16628, Czech Republic
| | - Bernd Winter
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
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11
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Dašková V, Buter J, Schoonen AK, Lutz M, de Vries F, Feringa BL. Chiral Amplification of Phosphoramidates of Amines and Amino Acids in Water. Angew Chem Int Ed Engl 2021; 60:11120-11126. [PMID: 33605523 PMCID: PMC8252365 DOI: 10.1002/anie.202014955] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Revised: 02/04/2021] [Indexed: 01/22/2023]
Abstract
The origin of biomolecular homochirality continues to be one of the most fascinating aspects of prebiotic chemistry. Various amplification strategies for chiral compounds to enhance a small chiral preference have been reported, but none of these involves phosphorylation, one of nature's essential chemical reactions. Here we present a simple and robust concept of phosphorylation-based chiral amplification of amines and amino acids in water. By exploiting the difference in solubility of a racemic phosphoramidate and its enantiopure form, we achieved enantioenrichment in solution. Starting with near racemic, phenylethylamine-based phosphoramidates, ee's of up to 95 % are reached in a single amplification step. Particularly noteworthy is the enantioenrichment of phosphorylated amino acids and their derivatives, which might point to a potential role of phosphorus en-route to prebiotic homochirality.
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Affiliation(s)
- Vanda Dašková
- Stratingh Institute for ChemistryUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Jeffrey Buter
- Stratingh Institute for ChemistryUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Anne K. Schoonen
- Stratingh Institute for ChemistryUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Martin Lutz
- Crystal and Structural ChemistryBijvoet Centre for Biomolecular ResearchUtrecht UniversityPadualaan 83584CHUtrechtThe Netherlands
| | - Folkert de Vries
- Stratingh Institute for ChemistryUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Ben L. Feringa
- Stratingh Institute for ChemistryUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
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12
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Han J, Wzorek A, Klika KD, Soloshonok VA. Recommended Tests for the Self-Disproportionation of Enantiomers (SDE) to Ensure Accurate Reporting of the Stereochemical Outcome of Enantioselective Reactions. MOLECULES (BASEL, SWITZERLAND) 2021; 26:molecules26092757. [PMID: 34067099 PMCID: PMC8124418 DOI: 10.3390/molecules26092757] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Revised: 05/04/2021] [Accepted: 05/04/2021] [Indexed: 12/14/2022]
Abstract
The purpose of this review is to highlight the necessity of conducting tests to gauge the magnitude of the self-disproportionation of enantiomers (SDE) phenomenon to ensure the veracity of reported enantiomeric excess (ee) values for scalemic samples obtained from enantioselective reactions, natural products isolation, etc. The SDE always occurs to some degree whenever any scalemic sample is subjected to physicochemical processes concomitant with the fractionation of the sample, thus leading to erroneous reporting of the true ee of the sample if due care is not taken to either preclude the effects of the SDE by measurement of the ee prior to the application of physicochemical processes, suppressing the SDE, or evaluating all obtained fractions of the sample. Or even avoiding fractionation altogether if possible. There is a clear necessity to conduct tests to assess the magnitude of the SDE for the processes applied to samples and the updated and improved recommendations described herein cover chromatography and processes involving gas-phase transformations such as evaporation or sublimation.
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Affiliation(s)
- Jianlin Han
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, International Innovation Center for Forest Chemicals and Materials, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, China;
| | - Alicja Wzorek
- Institute of Chemistry, Jan Kochanowski University in Kielce, Uniwersytecka 7, 25-406 Kielce, Poland;
| | - Karel D. Klika
- Molecular Structure Analysis, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, D-69120 Heidelberg, Germany
- Correspondence: (K.D.K.); (V.A.S.)
| | - Vadim A. Soloshonok
- Department of Organic Chemistry I, Faculty of Chemistry, University of the Basque Country UPV/EHU, Paseo Manuel Lardizábal 3, 20018 San Sebastián, Spain
- IKERBASQUE, Basque Foundation for Science, Alameda Urquijo 36-5, Plaza Bizkaia, 48011 Bilbao, Spain
- Correspondence: (K.D.K.); (V.A.S.)
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13
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Dašková V, Buter J, Schoonen AK, Lutz M, Vries F, Feringa BL. Chiral Amplification of Phosphoramidates of Amines and Amino Acids in Water. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202014955] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Vanda Dašková
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen The Netherlands
| | - Jeffrey Buter
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen The Netherlands
| | - Anne K. Schoonen
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen The Netherlands
| | - Martin Lutz
- Crystal and Structural Chemistry Bijvoet Centre for Biomolecular Research Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands
| | - Folkert Vries
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen The Netherlands
| | - Ben L. Feringa
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen The Netherlands
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14
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Mirror Symmetry Breaking in Liquids and Their Impact on the Development of Homochirality in Abiogenesis: Emerging Proto-RNA as Source of Biochirality? Symmetry (Basel) 2020. [DOI: 10.3390/sym12071098] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Recent progress in mirror symmetry breaking and chirality amplification in isotropic liquids and liquid crystalline cubic phases of achiral molecule is reviewed and discussed with respect to its implications for the hypothesis of emergence of biological chirality. It is shown that mirror symmetry breaking takes place in fluid systems where homochiral interactions are preferred over heterochiral and a dynamic network structure leads to chirality synchronization if the enantiomerization barrier is sufficiently low, i.e., that racemization drives the development of uniform chirality. Local mirror symmetry breaking leads to conglomerate formation. Total mirror symmetry breaking requires either a proper phase transitions kinetics or minor chiral fields, leading to stochastic and deterministic homochirality, respectively, associated with an extreme chirality amplification power close to the bifurcation point. These mirror symmetry broken liquids are thermodynamically stable states and considered as possible systems in which uniform biochirality could have emerged. A model is hypothesized, which assumes the emergence of uniform chirality by chirality synchronization in dynamic “helical network fluids” followed by polymerization, fixing the chirality and leading to proto-RNA formation in a single process.
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15
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Reppe T, Poppe S, Cai X, Cao Y, Liu F, Tschierske C. Spontaneous mirror symmetry breaking in benzil-based soft crystalline, cubic liquid crystalline and isotropic liquid phases. Chem Sci 2020; 11:5902-5908. [PMID: 32874512 PMCID: PMC7446726 DOI: 10.1039/d0sc01396j] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2020] [Accepted: 04/29/2020] [Indexed: 01/06/2023] Open
Abstract
Benzil (diphenylethane-1,2-dione), which is a long known example for an achiral molecule crystallizing in a chiral space group, can also show mirror symmetry breaking in the fluid state if it is suitably functionalized. For some of the new benzil derivatives even three different subsequent mirror symmetry broken soft matter states with a chiral conglomerate structure can be observed. One is an isotropic liquid, the second one a cubic liquid crystal with a complex network structure and the third is a soft crystalline solid. Chirality develops by helical self-assembly combined with dynamic network formation, thus allowing macroscopic chirality synchronization. These achiral molecules, combining a transiently chiral bent core with multiple alkyl chains, provide a unique link between the mirror symmetry breaking phenomena observed for polycatenar and bent-core mesogens. The homogeneously chiral networks are of interest for application as chiral materials, and as templates for chiral recognition, separation and enantioselective catalysis.
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Affiliation(s)
- Tino Reppe
- Institute of Chemistry , Martin Luther University Halle-Wittenberg , Kurt-Mothes-Straße 2 , 06120 Halle , Germany .
| | - Silvio Poppe
- Institute of Chemistry , Martin Luther University Halle-Wittenberg , Kurt-Mothes-Straße 2 , 06120 Halle , Germany .
| | - Xiaoqian Cai
- State Key Laboratory for Mechanical Behaviour of Materials , Shaanxi International Research Center for Soft Matter , Xi'an Jiaotong University , Xi'an 710049 , P. R. China .
| | - Yu Cao
- State Key Laboratory for Mechanical Behaviour of Materials , Shaanxi International Research Center for Soft Matter , Xi'an Jiaotong University , Xi'an 710049 , P. R. China .
| | - Feng Liu
- State Key Laboratory for Mechanical Behaviour of Materials , Shaanxi International Research Center for Soft Matter , Xi'an Jiaotong University , Xi'an 710049 , P. R. China .
| | - Carsten Tschierske
- Institute of Chemistry , Martin Luther University Halle-Wittenberg , Kurt-Mothes-Straße 2 , 06120 Halle , Germany .
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16
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False Chirality, Absolute Enantioselection and CP Violation: Pierre Curie’s Legacy. MAGNETOCHEMISTRY 2020. [DOI: 10.3390/magnetochemistry6010005] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The 1884 suggestion of Pierre Curie (1859–1906) that the type of dissymmetry shown by collinear electric and magnetic fields may induce an enantiomeric excess, in a chemical reaction that would otherwise produce a racemic mixture, is explored in the context of fundamental symmetry arguments. Curie’s arrangement exhibits false chirality (time-noninvariant enantiomorphism), and so it may not induce absolute enantioselection (ae) in a process that has reached thermodynamic equilibrium, since it does not lift the degeneracy of chiral enantiomers. However, it may do so in far-from-equilibrium processes via a breakdown in microscopic reversibility analogous to that observed in elementary particle processes under the influence of CP violation, the associated force possessing false chirality with respect to CP enantiomorphism. In contrast, an influence like circularly polarized light exhibiting true chirality (time-invariant enantiomorphism) lifts the degeneracy of enantiomers, and so may induce ae in all circumstances. Although to date, ae has not been observed under the influence of Curie’s arrangement of collinear electric and magnetic fields, it is argued that two different experiments have now demonstrated ae under a falsely chiral influence in systems far from equilibrium, namely in a spinning sample under a gravitational field, and in the separation of enantiomers at a ferromagnetic surface.
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17
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Madsen MM, Jensen F, Thøgersen J. The primary photo-dissociation dynamics of amino acids in aqueous solution: breaking the Cα-bond. Phys Chem Chem Phys 2020; 22:2307-2318. [DOI: 10.1039/c9cp05836b] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Photo-excitation of aqueous amino acids at 200 nm breaks the Cα-bond.
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Affiliation(s)
| | - Frank Jensen
- Dept. of Chemistry
- Aarhus University
- DK-8000 Aarhus C
- Denmark
| | - Jan Thøgersen
- Dept. of Chemistry
- Aarhus University
- DK-8000 Aarhus C
- Denmark
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18
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Nemati A, Shadpour S, Querciagrossa L, Mori T, Zannoni C, Hegmann T. Highly Sensitive, Tunable Chirality Amplification through Space Visualized for Gold Nanorods Capped with Axially Chiral Binaphthyl Derivatives. ACS NANO 2019; 13:10312-10326. [PMID: 31424907 DOI: 10.1021/acsnano.9b03787] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
The creation and transmission of chirality in molecular systems is a well-known, widely applied notion. Our understanding of how the chirality of nanomaterials can be controlled, measured, transmitted through space, and applied is less well understood. Dynamic assemblies for chiral sensing or metamaterials engineered from chiral nanomaterials require exact methods to determine transmission and amplification of nanomaterial chirality through space. We report the synthesis of a series of gold nanorods (GNRs) with a constant aspect ratio of ∼4.3 capped with C2-symmetric, axially chiral binaphthyl thiols, preparation of dispersions in the nematic liquid crystal 5CB, measurements of the helical pitch, and the determination of the helical twisting power as well as the average distance between the chiral nanomaterial additives. By comparison to the neat organic chiral derivatives, we demonstrate how the amplification of chirality facilitated by GNRs decorated with chiral molecules can be used to clearly distinguish the chiral induction strength of a homologous series of binaphthyl derivatives, differing only in the length of the nontethered aliphatic chain, in the induced chiral nematic liquid crystal phase. Considering systematic errors in sample preparation and optical measurements, these chiral molecules would otherwise be deemed identical with respect to chiral induction. Notably, we find some of the highest ever-reported values of the helical twisting power. We further support our experimentally derived arguments of a more comprehensive understanding of chirality transfer by calculations of a suitable pseudoscalar chirality indicator.
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Affiliation(s)
- Ahlam Nemati
- Advanced Materials and Liquid Crystal Institute, Chemical Physics Interdisciplinary Program , Kent State University , Kent , Ohio 44242 , United States
| | - Sasan Shadpour
- Advanced Materials and Liquid Crystal Institute, Chemical Physics Interdisciplinary Program , Kent State University , Kent , Ohio 44242 , United States
| | - Lara Querciagrossa
- Dipartimento di Chimica Industriale "Toso Montanari" and INSTM , Università di Bologna , Viale Risorgimento 4 , IT-40136 Bologna , Italy
| | - Taizo Mori
- Graduate School of Frontier Science , The University of Tokyo , 5-1-5, Kashiwanoha , Kashiwa 277-0827 , Japan
| | - Claudio Zannoni
- Dipartimento di Chimica Industriale "Toso Montanari" and INSTM , Università di Bologna , Viale Risorgimento 4 , IT-40136 Bologna , Italy
| | - Torsten Hegmann
- Advanced Materials and Liquid Crystal Institute, Chemical Physics Interdisciplinary Program , Kent State University , Kent , Ohio 44242 , United States
- Department of Chemistry and Biochemistry , Kent State University , Kent , Ohio 44242 , United States
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19
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Shen Z, Sang Y, Wang T, Jiang J, Meng Y, Jiang Y, Okuro K, Aida T, Liu M. Asymmetric catalysis mediated by a mirror symmetry-broken helical nanoribbon. Nat Commun 2019; 10:3976. [PMID: 31484928 PMCID: PMC6726595 DOI: 10.1038/s41467-019-11840-3] [Citation(s) in RCA: 68] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2019] [Accepted: 07/25/2019] [Indexed: 11/13/2022] Open
Abstract
Although chirality has been recognized as an essential entity for life, it still remains a big mystery how the homochirality in nature emerged in essential biomolecules. Certain achiral motifs are known to assemble into chiral nanostructures. In rare cases, their absolute geometries are enantiomerically biased by mirror symmetry breaking. Here we report the first example of asymmetric catalysis by using a mirror symmetry-broken helical nanoribbon as the ligand. We obtain this helical nanoribbon from a benzoic acid appended achiral benzene-1,3,5-tricarboxamide by its helical supramolecular assembly and employ it for the Cu2+-catalyzed Diels–Alder reaction. By thorough optimization of the reaction (conversion: > 99%, turnover number: ~90), the enantiomeric excess eventually reaches 46% (major/minor enantiomers = 73/27). We also confirm that the helical nanoribbon indeed carries helically twisted binding sites for Cu2+. Our achievement may provide the fundamental breakthrough for producing optically active molecules from a mixture of totally achiral motifs. If asymmetric catalysts were available by mirror symmetry breaking, an important insight may be given to how the biomolecular homochirality emerged in nature. Here, the authors report the first example of asymmetric catalysis by employing mirror symmetry-broken helical nanoribbons as the ligand.
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Affiliation(s)
- Zhaocun Shen
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Colloid, Interface and Chemical Thermodynamics, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China. .,Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan. .,University of Chinese Academy of Sciences, Beijing, 100049, P. R. China.
| | - Yutao Sang
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Colloid, Interface and Chemical Thermodynamics, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China.,University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Tianyu Wang
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Colloid, Interface and Chemical Thermodynamics, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
| | - Jian Jiang
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing, 100190, P. R. China
| | - Yan Meng
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Colloid, Interface and Chemical Thermodynamics, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China.,University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Yuqian Jiang
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing, 100190, P. R. China
| | - Kou Okuro
- Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan.
| | - Takuzo Aida
- Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan. .,RIKEN Center for Emergent Matter Science, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.
| | - Minghua Liu
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Colloid, Interface and Chemical Thermodynamics, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China. .,University of Chinese Academy of Sciences, Beijing, 100049, P. R. China. .,CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing, 100190, P. R. China. .,Collaborative Innovation Center of Chemical Science and Engineering, Tianjin, 300072, P. R. China.
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20
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Abstract
The origin of biological homochirality, e.g., life selects the L-amino acids and D-sugar as molecular component, still remains a big mystery. It is suggested that mirror symmetry breaking plays an important role. Recent researches show that symmetry breaking can also occur at a supramolecular level, where the non-covalent bond was crucial. In these systems, equal or unequal amount of the enantiomeric nanoassemblies could be formed from achiral molecules. In this paper, we presented a brief overview regarding the symmetry breaking from dispersed system to gels, solids, and at interfaces. Then we discuss the rational manipulation of supramolecular chirality on how to induce and control the homochirality in the self-assembly system. Those physical control methods, such as Viedma ripening, hydrodynamic macro- and micro-vortex, superchiral light, and the combination of these technologies, are specifically discussed. It is hoped that the symmetry breaking at a supramolecular level could provide useful insights into the understanding of natural homochirality and further designing as well as controlling of functional chiral materials.
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21
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Kartouzian A. Spectroscopy for model heterogeneous asymmetric catalysis. Chirality 2019; 31:641-657. [PMID: 31318108 DOI: 10.1002/chir.23113] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2019] [Accepted: 07/02/2019] [Indexed: 12/31/2022]
Abstract
Heterogeneous catalysis has vastly benefited from investigations performed on model systems under well-controlled conditions. The application of most of the techniques utilized for such studies is not feasible for asymmetric reactions as enantiomers possess identical physical and chemical properties unless while interacting with polarized light and other chiral entities. A thorough investigation of a heterogeneous asymmetric catalytic process should include probing the catalyst prior to, during, and after the reaction as well as the analysis of reaction products to evaluate the achieved enantiomeric excess. I present recent studies that demonstrate the strength of chiroptical spectroscopic methods to tackle the challenges in investigating model heterogeneous asymmetric catalysis covering all the abovementioned aspects.
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Affiliation(s)
- Aras Kartouzian
- Lehrstuhl für physikalische Chemie, Catalysis Research Center, Technische Universität München, Garching bei München, Germany
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22
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Hydration of serine–metal cation complexes: implication for the role of water in the origin of homochirality on the Earth. Amino Acids 2019; 51:1241-1246. [DOI: 10.1007/s00726-019-02753-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2019] [Accepted: 06/16/2019] [Indexed: 10/26/2022]
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23
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Сhiral and Racemic Fields Concept for Understanding of the Homochirality Origin, Asymmetric Catalysis, Chiral Superstructure Formation from Achiral Molecules, and B-Z DNA Conformational Transition. Symmetry (Basel) 2019. [DOI: 10.3390/sym11050649] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
The four most important and well-studied phenomena of mirror symmetry breaking of molecules were analyzed for the first time in terms of available common features and regularities. Mirror symmetry breaking of the primary origin of biological homochirality requires the involvement of an external chiral inductor (environmental chirality). All reviewed mirror symmetry breaking phenomena were considered from that standpoint. A concept of chiral and racemic fields was highly helpful in this analysis. A chiral gravitational field in combination with a static magnetic field (Earth’s environmental conditions) may be regarded as a hypothetical long-term chiral inductor. Experimental evidences suggest a possible effect of the environmental chiral inductor as a chiral trigger on the mirror symmetry breaking effect. Also, this effect explains a conformational transition of the right-handed double DNA helix to the left-handed double DNA helix (B-Z DNA transition) as possible DNA damage.
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24
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Electrochirogenesis: The Possible Role of Low-Energy Spin-Polarized Electrons in Creating Homochirality. Symmetry (Basel) 2019. [DOI: 10.3390/sym11040528] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
Electrochirogenesis deals with the induction of chirality by polarized electrons of which those with low energy (<15 eV) are seen to be the most effective. Possible sources of such electrons in the prebiotic universe are discussed and several examples where chiral induction by these electrons have been demonstrated are given. Finally, some possible scenarios where electrochirogenesis could have played a role in forming a chiral imbalance in a prebiotic setting have been speculated on and some possible future areas of research proposed.
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25
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Han J, Kitagawa O, Wzorek A, Klika KD, Soloshonok VA. The self-disproportionation of enantiomers (SDE): a menace or an opportunity? Chem Sci 2018; 9:1718-1739. [PMID: 29675218 PMCID: PMC5892310 DOI: 10.1039/c7sc05138g] [Citation(s) in RCA: 80] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2017] [Accepted: 01/12/2018] [Indexed: 01/05/2023] Open
Abstract
Herein we report on the well-documented, yet not widely known, phenomenon of the self-disproportionation of enantiomers (SDE): the spontaneous fractionation of scalemic material into enantioenriched and -depleted fractions when any physicochemical process is applied.
Herein we report on the well-documented, yet not widely known, phenomenon of the self-disproportionation of enantiomers (SDE): the spontaneous fractionation of scalemic material into enantioenriched and -depleted fractions when any physicochemical process is applied. The SDE has implications ranging from the origins of prebiotic homochirality to unconventional enantiopurification methods, though the risks of altering the enantiomeric excess (ee) unintentionally, regrettably, remain greatly unappreciated. While recrystallization is well known as an SDE process, occurrences of the SDE in other processes are much less recognized, e.g. sublimation and even distillation. But the most common process that many workers seem to be completely ignorant of is SDE via chromatography and reports have included all manner of structures, all types of interactions, and all forms of chromatography, including GC. The SDE can be either a blessing – as a means to obtain enantiopure samples from scalemates – or a curse, as unwitting alteration of the ee leads to errors in the reporting of results and/or misinterpretation of the system under study. Thus the ramifications of the SDE are relevant to any area involving chirality – natural products, asymmetric synthesis, etc. Moreover, there is grave concern regarding errors in the literature, in addition to the possible occurrence of valid results which may have been overlooked and thus remain unreported, as well as the potential for the SDE to alter the ee, particularly via chromatography, and the following concepts will be conveyed: (1) the SDE occurs under totally achiral conditions of (a) precipitation, (b) centrifugation, (c) evaporation, (d) distillation, (e) crystallization, (f) sublimation, and (g) achiral chromatography (e.g. column, flash, MPLC, HPLC, SEC, GC, etc.). (2) The SDE cannot be controlled simply by experimental accuracy and ignorance of the SDE unavoidably leads to mistakes in the recorded and reported stereochemical outcome of enantioselective transformations. (3) The magnitude of the SDE (the difference between the extremes of enantioenrichment and -depletion) can be controlled and used to: (a) minimize mistakes in the recorded experimental values and (b) to develop unconventional and preparatively superior methods for enantiopurification. (4) The magnitude of the SDE cannot be predicted but can be expected for compounds possessing SDE-phoric groups or which have a general tendency for strong hydrogen or halogen bonds or dipole–dipole or aromatic π–π interactions. (5) An SDE test and the rigorous reporting and description of applied physicochemical processes should become part of standard experimental practice to prevent the erroneous reporting of the stereochemical outcome of enantioselective catalytic reactions and the chirooptical properties of scalemates. New directions in the study of the SDE, including halogen bonding-based interactions and novel, unconventional enantiopurification methods such as pseudo-SDE (chiral selector-assisted SDE resolution of racemates), are also reported.
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Affiliation(s)
- Jianlin Han
- School of Chemistry and Chemical Engineering , State Key Laboratory of Coordination Chemistry , Jiangsu Key Laboratory of Advanced Organic Materials , Nanjing University , 210093 Nanjing , China .
| | - Osamu Kitagawa
- Department of Applied Chemistry , Shibaura Institute of Technology , 3-7-5 Toyosu, Kohto-ku , Tokyo 135-8548 , Japan
| | - Alicja Wzorek
- Institute of Chemistry , Jan Kochanowski University in Kielce , Świętokrzyska 15G , 25-406 Kielce , Poland.,Department of Organic Chemistry I , Faculty of Chemistry , University of the Basque Country UPV/EHU , Paseo Manuel Lardizábal 3 , 20018 San Sebastián , Spain .
| | - Karel D Klika
- Molecular Structure Analysis , German Cancer Research Center (DKFZ) , Im Neuenheimer Feld 280 , D-69009 Heidelberg , Germany .
| | - Vadim A Soloshonok
- Department of Organic Chemistry I , Faculty of Chemistry , University of the Basque Country UPV/EHU , Paseo Manuel Lardizábal 3 , 20018 San Sebastián , Spain . .,IKERBASQUE, Basque Foundation for Science , Alameda Urquijo 36-5, Plaza, Bizkaia , 48011 Bilbao , Spain
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26
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Dutta J, Wakdikar N, Tiwari S. Nonlinear effects at the soft interface of an emulsion in the List–Lerner–Barbas aldol reaction. Org Biomol Chem 2017; 15:6746-6752. [DOI: 10.1039/c7ob01576c] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
“Soft” yet promising: Nonlinear asymmetric induction of the List–Lerner–Barbas aldol reaction observed at the soft interface of an emulsion opens up hitherto unexplored possibilities which were previously restricted to solid–liquid phase equilibria.
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Affiliation(s)
- Jyoti Dutta
- Department of Chemistry
- Institute of Chemical Technology
- Mumbai-400019
- India
| | - Nutan Wakdikar
- Department of Chemistry and Biochemistry
- University of South Carolina
- USA
| | - Shraeddha Tiwari
- Department of Chemistry
- Institute of Chemical Technology
- Mumbai-400019
- India
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27
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Affiliation(s)
- Vadim A. Davankov
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 Moscow 119991 (Russia)
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28
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Desmarchelier A, Caumes X, Raynal M, Vidal-Ferran A, van Leeuwen PWNM, Bouteiller L. Correlation between the Selectivity and the Structure of an Asymmetric Catalyst Built on a Chirally Amplified Supramolecular Helical Scaffold. J Am Chem Soc 2016; 138:4908-16. [PMID: 26998637 DOI: 10.1021/jacs.6b01306] [Citation(s) in RCA: 86] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
For the first time, supramolecular helical rods composed of an achiral metal complex and a complementary enantiopure monomer provided a good level of enantioinduction in asymmetric catalysis. Mixtures containing an achiral ligand monomer (BTA(PPh2), 2 mol %) and an enantiopure ligand-free comonomer (ester BTA, 2.5 mol %), both possessing a complementary benzene-1,3,5-tricarboxamide (BTA) central unit, were investigated in combination with [Rh(cod)2]BArF (1 mol %) in the asymmetric hydrogenation of dimethyl itaconate. Notably, efficient chirality transfer occurs within the hydrogen-bonded coassemblies formed by BTA Ile and the intrinsically achiral catalytic rhodium catalyst, providing the hydrogenation product with up to 85% ee. The effect of the relative content of BTA Ile as compared to the ligand was investigated. The amount of chiral comonomer can be decreased down to one-fourth of that of the ligand without deteriorating the enantioselectivity of the reaction, while the enantioselectivity decreases for mixtures containing high amounts of BTA Ile. The nonlinear relationship between the amount of chiral comonomer and the enantioselectivity indicates that chirality amplification effects are at work in this catalytic system. Also, right-handed helical rods are formed upon co-assembly of the achiral rhodium complex of BTA(PPh2) and the enantiopure comonomer BTA Ile as confirmed by various spectroscopic and scattering techniques. Remarkably, the major enantiomer and the selectivity of the catalytic reaction are related to the handedness and the net helicity of the coassemblies, respectively. Further development of this class of catalysts built on chirally amplified helical scaffolds should contribute to the design of asymmetric catalysts operating with low amounts of chiral entities.
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Affiliation(s)
- Alaric Desmarchelier
- Sorbonne Universités, UPMC Univ Paris 06, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères , 4 Place Jussieu, F-75005 Paris, France
| | - Xavier Caumes
- Sorbonne Universités, UPMC Univ Paris 06, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères , 4 Place Jussieu, F-75005 Paris, France
| | - Matthieu Raynal
- Sorbonne Universités, UPMC Univ Paris 06, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères , 4 Place Jussieu, F-75005 Paris, France
| | - Anton Vidal-Ferran
- Institute of Chemical Research of Catalonia (ICIQ) , Avgda. Països Catalans 16, 43007 Tarragona, Spain.,Catalan Institution for Research and Advanced Studies (ICREA) , Passeig Lluís Companys 23, 08010 Barcelona, Spain
| | | | - Laurent Bouteiller
- Sorbonne Universités, UPMC Univ Paris 06, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères , 4 Place Jussieu, F-75005 Paris, France
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29
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Tschierske C, Ungar G. Mirror Symmetry Breaking by Chirality Synchronisation in Liquids and Liquid Crystals of Achiral Molecules. Chemphyschem 2015; 17:9-26. [DOI: 10.1002/cphc.201500601] [Citation(s) in RCA: 131] [Impact Index Per Article: 13.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2015] [Indexed: 01/05/2023]
Affiliation(s)
- Carsten Tschierske
- Institute of Chemistry, Organic Chemistry; Martin Luther University Halle-Wittenberg; Kurt-Mothes Str. 2 06120 Halle/Saale Germany
| | - Goran Ungar
- Department of Physics; Zhejiang Sci-Tech University; Xiasha College Park 310018 Hangzhou China
- Department of Materials Science and Engineering; University of Sheffield; Sheffield S1 3JD Sheffield UK
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30
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Rosenberg RA, Mishra D, Naaman R. Chiral Selective Chemistry Induced by Natural Selection of Spin-Polarized Electrons. Angew Chem Int Ed Engl 2015; 54:7295-8. [PMID: 25950284 DOI: 10.1002/anie.201501678] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2015] [Revised: 04/08/2015] [Indexed: 11/07/2022]
Abstract
The search to understand the origin of homochirality in nature has been ongoing since the time of Pasteur. Previous work has shown that DNA can act as a spin filter for low-energy electrons and that spin-polarized secondary electrons produced by X-ray irradiation of a magnetic substrate can induce chiral selective chemistry. In the present work it is demonstrated that secondary electrons from a substrate that are transmitted through a chiral overlayer cause enantiomeric selective chemistry in an adsorbed adlayer. We determine the quantum yields (QYs) for dissociation of (R)- or (S)-epichlorohydrin adsorbed on a chiral self-assembled layer of DNA on gold and on bare gold (for control). The results show that there is a significant difference in the QYs between the two enantiomers when adsorbed on DNA, but none when they are adsorbed on bare Au. We propose that the effect results from natural spin filtering effects cause by the chiral monolayer.
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Affiliation(s)
- Richard A Rosenberg
- Advanced Photon Source, Argonne National Laboratory, 9700 S. Cass Avenue, Argonne, IL 60439 (USA).
| | - Debabrata Mishra
- Department of Chemical Physics, Weizmann Institute, Rehovot 76100 (Israel)
| | - Ron Naaman
- Department of Chemical Physics, Weizmann Institute, Rehovot 76100 (Israel)
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Rosenberg RA, Mishra D, Naaman R. Chiral Selective Chemistry Induced by Natural Selection of Spin-Polarized Electrons. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201501678] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Myrgorodska I, Meinert C, Martins Z, Le Sergeant d'Hendecourt L, Meierhenrich UJ. Molekülchiralität in Meteoriten und interstellarem Eis und das Chiralitätsexperiment an Bord der Kometenmission Rosetta der ESA. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201409354] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Myrgorodska I, Meinert C, Martins Z, Le Sergeant d'Hendecourt L, Meierhenrich UJ. Molecular chirality in meteorites and interstellar ices, and the chirality experiment on board the ESA cometary Rosetta mission. Angew Chem Int Ed Engl 2014; 54:1402-12. [PMID: 25431250 DOI: 10.1002/anie.201409354] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2014] [Indexed: 11/12/2022]
Abstract
Life, as it is known to us, uses exclusively L-amino acid and D-sugar enantiomers for the molecular architecture of proteins and nucleic acids. This Minireview explores current models of the original symmetry-breaking influence that led to the exogenic delivery to Earth of prebiotic molecules with a slight enantiomeric excess. We provide a short overview of enantiomeric enhancements detected in bodies of extraterrestrial origin, such as meteorites, and interstellar ices simulated in the laboratory. Data are interpreted from different points of view, namely, photochirogenesis, parity violation in the weak nuclear interaction, and enantioenrichment through phase transitions. Photochemically induced enantiomeric imbalances are discussed more specifically in the topical context of the "chirality module" on board the cometary Rosetta spacecraft of the ESA. This device will perform the first enantioselective in situ analyses of samples taken from a cometary nucleus.
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Affiliation(s)
- Iuliia Myrgorodska
- Institut de Chimie de Nice ICN, UMR CNRS 7272, Université Nice Sophia Antipolis, Faculté des Sciences, Parc Valrose, 06108, Nice (France) http://www.unice.fr/meierhenrich/
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Mainprice D, Bachmann F, Hielscher R, Schaeben H, Lloyd GE. Calculating anisotropic piezoelectric properties from texture data using the MTEX open source package. ACTA ACUST UNITED AC 2014. [DOI: 10.1144/sp409.2] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
AbstractThis paper presents the background for the calculation of anisotropic piezoelectric properties of single crystals and the graphical display of the results in two or three dimensions, and the calculation of the aggregate properties from constituent crystals and the texture of the aggregate in a coherent manner. The texture data can be obtained from a wide range of sources, including pole figure diffraction and single orientation measurements (electron backscattered diffraction, electron channelling pattern, Laue Pattern, optical microscope universal-stage). We consider the elastic wave propagation in piezoelectric crystals as an example of the interaction of electrical (2nd rank tensor), piezoelectric (3rd rank tensor) and elastic properties (4th rank tensor). In particular, we give explicit formulae for the calculation of the Voigt averaged tensor from individual orientations or from an orientation distribution function. For the latter we consider numerical integration and an approach based on the expansion into spherical harmonics. We illustrate the methods using single crystals, polycrystalline quartz measured using electron channelling patterns and ideal Curie limiting groups applied to quartz aggregates. This paper also serves as a reference paper for the mathematical tensor capabilities of the texture analysis software MTEX.
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Affiliation(s)
- David Mainprice
- Geosciences Montpellier UMR CNRS 5243, Université Montpellier 2, 34095 Montpellier Cedex 05, France
| | - Florian Bachmann
- Mathematische Geologie und Geoinformatik, Institut für Geophysik und Geoinformatik, Technische Universität Freiberg, 09596 Freiberg, Germany
| | - Ralf Hielscher
- Fakultät für Mathematik, Technische Universität Chemnitz, 09126 Chemnitz, Germany
| | - Helmut Schaeben
- Mathematische Geologie und Geoinformatik, Institut für Geophysik und Geoinformatik, Technische Universität Freiberg, 09596 Freiberg, Germany
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Mendola D, Saleh N, Vanthuyne N, Roussel C, Toupet L, Castiglione F, Caronna T, Mele A, Crassous J. Aza[6]helicene Platinum Complexes: Chirality Control ofcis-transIsomerism. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201401004] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Mendola D, Saleh N, Vanthuyne N, Roussel C, Toupet L, Castiglione F, Caronna T, Mele A, Crassous J. Aza[6]helicene Platinum Complexes: Chirality Control ofcis-transIsomerism. Angew Chem Int Ed Engl 2014; 53:5786-90. [DOI: 10.1002/anie.201401004] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2014] [Revised: 03/03/2014] [Indexed: 11/06/2022]
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Ercolani G. Principles for designing an achiral receptor promoting asymmetric autocatalysis with amplification of chirality. ACTA ACUST UNITED AC 2014. [DOI: 10.1016/j.tetasy.2014.02.005] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Barron LD. True and false chirality and absolute enantioselection. RENDICONTI LINCEI-SCIENZE FISICHE E NATURALI 2013. [DOI: 10.1007/s12210-013-0224-6] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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