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Cabral TLG, Poggetto GD, Brussolo da Silva JP, Nilsson M, Tormena CF. Determining the Absolute Configuration of Small Molecules by Diffusion NMR Experiments. Angew Chem Int Ed Engl 2025; 64:e202418508. [PMID: 39377636 DOI: 10.1002/anie.202418508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2024] [Revised: 10/07/2024] [Accepted: 10/08/2024] [Indexed: 10/09/2024]
Abstract
Enantiomers are ubiquitous in many areas of science, such as pharmaceuticals, agriculture, and food. Nuclear magnetic resonance (NMR) alone is not able to differentiate enantiomers as their spectra are identical. However, these can be distinguished using chiral auxiliaries (such as chiral complexing agents) that form diastereomeric complexes, but absolute identification is still troublesome, usually requiring a chemical reaction with a chiral derivatizing agent. Here, we propose a new method that uses a hybrid mixture of solvating agents in a simple comparison of diffusion NMR experiments, which can discriminate enantiomers in both frequency and diffusion domains, dubbed CHIMERA (CHIral Micelle Enantiomer Resolving Agent). The new method was assessed for twenty-three small chiral molecules using a combination of BINOL and (-)-DMEB, a chiral surfactant, and initial results indicate that absolute configuration can be obtained from a simple experiment.
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Affiliation(s)
- Tadeu Luiz Gomes Cabral
- Chemistry Institute, University of Campinas - UNICAMP P.O. Box 6154, 13083-970, Campinas, SP, Brazil
| | - Guilherme Dal Poggetto
- Merck & Co. Inc, Analytical Research & Development, 126 Lincoln Ave, Rahway, NJ, 07065, USA
| | | | - Mathias Nilsson
- Department of Chemistry, University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Claudio F Tormena
- Chemistry Institute, University of Campinas - UNICAMP P.O. Box 6154, 13083-970, Campinas, SP, Brazil
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2
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Müller C, Scholten K, Engelage E, Merten C. Synthesis and VCD Spectroscopic Characterization of a Series of Azacryptands from a Chiral Valine-Based Derivative of Tris(2-aminoethyl)amine (TREN). Chemistry 2023; 29:e202302126. [PMID: 37556200 DOI: 10.1002/chem.202302126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 08/09/2023] [Accepted: 08/09/2023] [Indexed: 08/10/2023]
Abstract
Utilizing experimental and computational vibrational circular dichroism (VCD) spectroscopy, we explored the conformational preferences of a series of chiral C3 -symmetric octaazacryptands with tris(2-aminoethyl)-amine head groups derived from valine. While the spectra of the smallest azacryptand with p-phenyl linkers and its elongated derivative with p-biphenyls linker were found to match well with the computed spectra, the computed conformational preferences of the m-biphenyl-based azacryptand did not seem to reflect the conformations dominating in chloroform solution. A detailed analysis revealed that structural changes resulting in a collapsed cage structure gave a notably better match with the experiment. It could subsequently be concluded from the VCD analysis, that the octaazacryptands prefer a collapsed structure, which is not predicted by density functional theory (DFT) calculations as the global minimum structures. These findings are expected to have consequences also for future studies on inclusion complexes of such azacryptands.
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Affiliation(s)
- Clemens Müller
- Ruhr Universität Bochum, Fakultät für Chemie und Biochemie, Organische Chemie II, Universitätsstraße 150, 44801, Bochum, Germany
| | - Kevin Scholten
- Ruhr Universität Bochum, Fakultät für Chemie und Biochemie, Organische Chemie II, Universitätsstraße 150, 44801, Bochum, Germany
| | - Elric Engelage
- Ruhr Universität Bochum, Fakultät für Chemie und Biochemie, Organische Chemie II, Universitätsstraße 150, 44801, Bochum, Germany
| | - Christian Merten
- Ruhr Universität Bochum, Fakultät für Chemie und Biochemie, Organische Chemie II, Universitätsstraße 150, 44801, Bochum, Germany
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3
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Weirich L, Tusha G, Engelage E, Schäfer LV, Merten C. VCD spectroscopy reveals conformational changes of chiral crown ethers upon complexation of potassium and ammonium cations. Phys Chem Chem Phys 2022; 24:11721-11728. [PMID: 35506489 DOI: 10.1039/d2cp01309f] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two chiral derivatives of 18-crown-6, namely the host molecules 2,3-diphenyl- and 2-phenyl-18c6, serve as model systems to investigate whether VCD spectroscopy can be used to monitor conformational changes occurring upon complexation of guests. Host-guest complexes of both crown ethers were prepared by addition of KNO3. The more bulky 2,3-diphenyl-18c6 is found to undergo major conformational changes upon encapsulation of K+, which are revealed as characteristic changes of the VCD spectral signatures. In contrast, while 2-phenyl-18c6 also incorporates K+ into the macrocycle, strong conformational changes are not occurring and thus spectral changes are negligible. With an octyl ammonium cation as guest molecule, 2,3-diphenyl-18c6 shows the same conformational and spectral changes that were observed for K+-complexes. In addition, the asymmetric NH3-deformation modes are found to gain VCD intensity through an induced VCD process. An analysis of the vibrational spectra enables a differentiation of VCD active and inactive guest modes: There appears to be a correlation between the symmetry of the vibrational mode and the induced VCD intensity. While this finding makes the host-guest complexes interesting systems for future theoretical studies on the origin of induced VCD signatures, the observations described in this study demonstrate that VCD spectroscopy is indeed a suitable technique for the characterization of supramolecular host-guest complexes.
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Affiliation(s)
- Luisa Weirich
- Ruhr-Universität Bochum, Fakultät für Chemie und Biochemie, Organische Chemie II, Universitätsstraße 150, 44801 Bochum, Germany.
| | - Gers Tusha
- Ruhr-Universität Bochum, Fakultät für Chemie und Biochemie, Theoretische Chemie, Universitätsstraße 150, 44801 Bochum, Germany
| | - Elric Engelage
- Ruhr-Universität Bochum, Fakultät für Chemie und Biochemie, Organische Chemie II, Universitätsstraße 150, 44801 Bochum, Germany.
| | - Lars V Schäfer
- Ruhr-Universität Bochum, Fakultät für Chemie und Biochemie, Theoretische Chemie, Universitätsstraße 150, 44801 Bochum, Germany
| | - Christian Merten
- Ruhr-Universität Bochum, Fakultät für Chemie und Biochemie, Organische Chemie II, Universitätsstraße 150, 44801 Bochum, Germany.
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Weirich L, Merten C. Induced VCD and conformational chirality in host-guest complexes of a chiral ammonium salt with crown ethers. Phys Chem Chem Phys 2021; 23:18300-18307. [PMID: 34114592 DOI: 10.1039/d1cp01846a] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The hydrogen bonded complexes of the chiral ammonium salt α-methylbenzyl ammonium chloride (MBA-H+Cl-) and the achiral crown ethers 18c6 and 15c5 serve as model systems to investigate the effect of host-guest complex formation on the conformational preferences of the macrocycles. We demonstrate that the intermolecular interactions result in new VCD signatures, that can be assigned to vibrational modes of the crown ethers. Based on a detailed conformational analysis, we investigate the origin of these signatures and discuss induced VCD (iVCD) and conformational chirality as possible sources of VCD intensity. The macrocycle in the MBA-H+/18c6 complex prefers either an achiral D3d-symmetric conformation, which gives rise to iVCD, or chiral conformations, that feature individual contributions to the VCD spectrum. For the MBA-H+/15c5 complex, the contributions of the macrocycle to the VCD signatures are less pronounced and found to arise solely from conformational chirality. Therefore, analysis of the VCD signatures confirms that the small chiral guest molecule is able to affect the conformational preferences of a macrocyclic host. The study thus demonstrates the suitability of VCD spectroscopy for the characterization of analogous supramolecular host-guest complexes.
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Affiliation(s)
- Luisa Weirich
- Ruhr-Universität Bochum, Fakultät für Chemie und Biochemie, Organische Chemie II, Universitätsstraße 150, 44801 Bochum, Germany.
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Raghavan V, Polavarapu PL. Specific optical rotation is a versatile tool for the identification of critical micelle concentration and micellar growth of tartaric acid-based diastereomeric amphiphiles. Chirality 2017; 29:836-846. [PMID: 28991388 DOI: 10.1002/chir.22767] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Revised: 08/14/2017] [Accepted: 08/29/2017] [Indexed: 11/09/2022]
Abstract
Four novel tartaric acid-based diastereomeric chiral amphiphiles, two being enantiomers of the other two, have been synthesized and investigated using chiroptical spectroscopic methods, along with tensiometry and dynamic light scattering experiments. We found that an inflection point in specific optical rotation (SOR) values at ~0.32 mM corresponds to the critical micelle concentration (CMC). The increase in magnitude of SOR values beyond CMC corresponds to the growth of aggregates. For enantiomers, oppositely signed SOR values were observed, ruling out the possibility for the presence of aggregation size mediated artefacts. SOR values did not exhibit concentration dependence for a chiral tartaric acid based non-aggregating analogue further establishing the absence of artefacts or anomalous interaction of tartaric acid based head group with solvent. Electronic circular dichroism spectra showed no significant changes in band positions or intensities with concentration. Due to the requirement for higher concentrations (~200 mM) needed to obtain vibrational circular dichroism spectra, these measurements are not found to be useful for studying concentration dependent properties of chiral amphiphiles.
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Affiliation(s)
- Vijay Raghavan
- Department of Chemistry, Vanderbilt University, Nashville, Tennessee, USA
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6
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Merten C. Vibrational optical activity as probe for intermolecular interactions. Phys Chem Chem Phys 2017; 19:18803-18812. [DOI: 10.1039/c7cp02544k] [Citation(s) in RCA: 59] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
A detailed VCD spectroscopic analysis of well-selected chiral model systems can give valuable and unprecedented insights into intermolecular interactions such as solvation or reactant–substrate binding in catalysis.
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Bongiorno D, Ceraulo L, Indelicato S, Turco Liveri V, Indelicato S. Charged supramolecular assemblies of surfactant molecules in gas phase. MASS SPECTROMETRY REVIEWS 2016; 35:170-187. [PMID: 26113001 DOI: 10.1002/mas.21476] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2015] [Indexed: 06/04/2023]
Abstract
The aim of this review is to critically analyze recent literature on charged supramolecular assemblies formed by surfactant molecules in gas phase. Apart our specific interest on this research area, the stimuli to undertake the task arise from the widespread theoretical and applicative benefits emerging from a comprehensive view of this topic. In fact, the study of the formation, stability, and physicochemical peculiarities of non-covalent assemblies of surfactant molecules in gas phase allows to unveil interesting aspects such as the role of attractive, repulsive, and steric intermolecular interactions as driving force of supramolecular organization in absence of interactions with surrounding medium and the size and charge state dependence of aggregate structural and dynamical properties. Other interesting aspects worth to be investigated are joined to the ability of these assemblies to incorporate selected solubilizates molecules as well as to give rise to chemical reactions within a single organized structure. In particular, the incorporation of large molecules such as proteins has been of recent interest with the objective to protect their structure and functionality during the transition from solution to gas phase. Exciting fall-out of the study of gas phase surfactant aggregates includes mass and energy transport in the atmosphere, origin of life and simulation of supramolecular aggregation in the interstellar space. Moreover, supramolecular assemblies of amphiphilic molecules in gas phase could find remarkable applications as atmospheric cleaning agents, nanosolvents and nanoreactors for specialized chemical processes in confined space. Mass spectrometry techniques have proven to be particularly suitable to generate these assemblies and to furnish useful information on their size, size polydispersity, stability, and structural organization. On the other hand molecular dynamics simulations have been very useful to rationalize many experimental findings and to furnish a vivid picture of the structural and dynamic features of these aggregates. Thus, in this review, we will focus on the most important achievements gained in recent years by both these investigative tools.
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Affiliation(s)
- David Bongiorno
- Dipartimento di Scienze e Tecnologie Biologiche Chimiche Farmaceutiche (STEBICEF), Università degli Studi di Palermo, Via Archirafi 32, I-90123, Palermo, Italy
- Centro Grandi Apparecchiature-UniNetLab, Università degli Studi di Palermo, Via Marini 14, I-90128, Palermo, Italy
| | - Leopoldo Ceraulo
- Dipartimento di Scienze e Tecnologie Biologiche Chimiche Farmaceutiche (STEBICEF), Università degli Studi di Palermo, Via Archirafi 32, I-90123, Palermo, Italy
- Centro Grandi Apparecchiature-UniNetLab, Università degli Studi di Palermo, Via Marini 14, I-90128, Palermo, Italy
| | - Sergio Indelicato
- Core Laboratory of Quality control and Chemical Risk, Policlinico P. Giaccone, Università di Palermo, via del Vespro 129, I-90127, Palermo, Italy
| | - Vincenzo Turco Liveri
- Dipartimento di Scienze e Tecnologie Biologiche Chimiche Farmaceutiche (STEBICEF), Università degli Studi di Palermo, Via Archirafi 32, I-90123, Palermo, Italy
| | - Serena Indelicato
- Dipartimento di Scienze e Tecnologie Biologiche Chimiche Farmaceutiche (STEBICEF), Università degli Studi di Palermo, Via Archirafi 32, I-90123, Palermo, Italy
- Centro Grandi Apparecchiature-UniNetLab, Università degli Studi di Palermo, Via Marini 14, I-90128, Palermo, Italy
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Taniguchi T, Manai D, Shibata M, Itabashi Y, Monde K. Stereochemical analysis of glycerophospholipids by vibrational circular dichroism. J Am Chem Soc 2015; 137:12191-4. [PMID: 26379046 DOI: 10.1021/jacs.5b05832] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
The stereochemistry of glycerophospholipids (GPLs) has been of interest for its roles in the evolution of life and in their biological activity. However, because of their structural complexity, no convenient method to determine their configuration has been reported. In this work, through the first systematic application of vibrational circular dichroism (VCD) spectroscopy to various diacylated GPLs, we have revealed that their chirality can be assigned by the sign of a VCD exciton couplet generated by the interaction of two carbonyl groups. This paper also presents spectroscopic evidence for the stereochemistry of GPLs isolated from bacteria, eukaryotes, and mitochondria.
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Affiliation(s)
- Tohru Taniguchi
- Faculty of Advanced Life Science, Frontier Research Center for Post-Genome Science and Technology, Hokkaido University , Kita 21 Nishi 11, Sapporo 001-0021, Japan
| | - Daisuke Manai
- Faculty of Advanced Life Science, Frontier Research Center for Post-Genome Science and Technology, Hokkaido University , Kita 21 Nishi 11, Sapporo 001-0021, Japan
| | - Masataka Shibata
- Faculty of Advanced Life Science, Frontier Research Center for Post-Genome Science and Technology, Hokkaido University , Kita 21 Nishi 11, Sapporo 001-0021, Japan
| | - Yutaka Itabashi
- Graduate School of Fisheries Sciences, Hokkaido University , Hakodate 041-8611, Japan
| | - Kenji Monde
- Faculty of Advanced Life Science, Frontier Research Center for Post-Genome Science and Technology, Hokkaido University , Kita 21 Nishi 11, Sapporo 001-0021, Japan
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