Partial migration alters population ecology and food chain length: evidence from a salmonid fish

Will I stay or will I go? Eye morphology predicts individual migratory propensity in a partial migrant

Billions of animals undertake migratory journeys every year, with powerful consequences for ecosystem dynamics. Key behaviours that enable successful migration are often guided by the visual system. The amount and quality of information that animals can extract from visual scenes are directly related to structural eye size-larger eyes can house larger pupils, enhancing light-gathering capacity and vision by improving visual acuity and contrast sensitivity. Migration should exert strong demands on individual visual performance, for example via foraging, antipredator benefits or navigational requirements. Yet, it remains elusive whether variations in eye morphology and corresponding visual capabilities are associated with migratory propensity. Here, we capitalize upon intra-population variation in migratory propensity (also known as partial migration) in roach, a common freshwater fish, to directly test for migration-associated variation in image-forming eyes within a species. In a multi-year field study tracking the migration decisions of over 2000 individuals in two different lake systems, we found that relative pupil size was positively associated with individual migration propensity. Computational simulations of the visual ecology associated with the observed differences in pupil size show that migrants have an extended visual detection range and that the performance gain is most pronounced for viewing small targets (e.g. planktonic prey) under low-light conditions. These results suggest that the larger pupils of migrants represent an adaptation for increased foraging efficiency to aid in the accumulation of critical pre-migratory energy reserves. Together, our anatomical and functional findings provide new perspectives on visual system design in relation to individual-level migratory decision-making.

Anatomy of a range contraction: Flow-phenology mismatches threaten salmonid fishes near their trailing edge

Climate change is redistributing life on Earth, with profound impacts for ecosystems and human well-being. While repeat surveys separated by multidecadal intervals can determine whether observed shifts are in the expected direction (e.g., poleward or upslope due to climate change), they do not reveal their mechanisms or time scales: whether they were gradual responses to environmental trends or punctuated responses to disturbance events. Here, we document population reductions and temporary range contractions at multiple sites resulting from drought for three Pacific salmonids at their ranges' trailing edge. During California's 2012 to 2016 historic multiyear drought, the 2013 to 2014 winter stood apart because rainfall was both reduced and delayed. Extremely low river flows during the breeding season ("flow-phenology mismatch") reduced or precluded access to breeding habitat. While Chinook (Oncorhynchus tshawytscha) experienced a down-river range shift, entire cohorts failed in individual tributaries (steelhead trout, O. mykiss) and in entire watersheds (coho salmon, O. kisutch). Salmonids returned to impacted sites in subsequent years, rescued by reserves in the ocean, life history diversity, and, in one case, a conservation broodstock program. Large population losses can, however, leave trailing-edge populations vulnerable to extinction due to demographic stochasticity, making permanent range contraction more likely. When only a few large storms occur during high flow season, the timing of particular storms plays an outsized role in determining which migratory fish species are able to access their riverine breeding grounds and persist.

Migratory-derived resources induce elongated food chains through middle-up food web effects

BACKGROUND

Seasonal movements of animals often result in the transfer of large amounts of energy and nutrients across ecosystem boundaries, which may have large consequences on local food webs through various pathways. While this is known for both terrestrial- and aquatic organisms, quantitative estimates on its effects on food web structure and identification of key pathways are scarce, due to the difficulty in obtaining replication on ecosystem level with negative control, i.e. comparable systems without migration.

METHODS

In this study, we estimate the impact of Arctic charr (Salvelinus alpinus) migration on riverine ecosystem structure, by comparing multiple streams with strictly resident populations above natural migration barriers with streams below those barriers harboring partially migratory populations. We compared density estimates and size structure between above and below populations. Diet differences were examined through the analysis of stomach contents, changes in trophic position were examined by using stable isotopes. To infer growth rate of resident individuals, back-growth calculation was performed using otoliths.

RESULTS

We find higher densities of small juveniles in partially migratory populations, where juvenile Arctic charr show initially lower growth, likely due to higher intraspecific competition. After reaching a size, where they can start feeding on eggs and smaller juveniles, which are both more frequent in partially migratory populations, growth surpasses that of resident populations. Cannibalism induced by high juvenile densities occurred almost exclusively in populations with migration and represents an altered energy pathway to the food web. The presence of large cannibalistic charr feeding on smaller ones that have a similar trophic level as charr from strictly resident populations (based on stomach content) coupled with steeper δ15N-size regression slopes illustrate the general increase of food chain length in systems with migration.

CONCLUSIONS

Our results thus suggest that the consumption of migration-derived resources may result in longer food chains through middle-up rather than bottom-up effects. Furthermore, by occupying the apex of the food chain and feeding on juvenile conspecifics, resident individuals experience reduced competition with their young counterparts, which potentially balances their fitness with migratory individuals.

Genetic divergence and one-way gene flow influence contemporary evolution and ecology of a partially migratory fish

Recent work has revealed the importance of contemporary evolution in shaping ecological outcomes. In particular, rapid evolutionary divergence between populations has been shown to impact the ecology of populations, communities, and ecosystems. While studies have focused largely on the role of adaptive divergence in generating ecologically important variation among populations, much less is known about the role of gene flow in shaping ecological outcomes. After divergence, populations may continue to interact through gene flow, which may influence evolutionary and ecological processes. Here, we investigate the role of gene flow in shaping the contemporary evolution and ecology of recently diverged populations of anadromous steelhead and resident rainbow trout (Oncorhynchus mykiss). Results show that resident rainbow trout introduced above waterfalls have diverged evolutionarily from downstream anadromous steelhead, which were the source of introductions. However, the movement of fish from above to below the waterfalls has facilitated gene flow, which has reshaped genetic and phenotypic variation in the anadromous source population. In particular, gene flow has led to an increased frequency of residency, which in turn has altered population density, size structure, and sex ratio. This result establishes gene flow as a contemporary evolutionary process that can have important ecological outcomes. From a management perspective, anadromous steelhead are generally regarded as a higher conservation priority than resident rainbow trout, even when found within the same watershed. Our results show that anadromous and resident O. mykiss populations may be connected via gene flow, with important ecological consequences. Such eco-evolutionary processes should be considered when managing recently diverged populations connected by gene flow.

Seasonal ecosystem linkages contribute to the maintenance of migratory polymorphism in a salmonid population

The influence of resource subsidies on animal growth, survival and reproduction is well understood, but their ultimate effects on life history have been less explored. Some wild species have a partially migratory life history, wherein migration is dictated based upon threshold traits regulated in part by the seasonal availability of resources. We conducted a large-scale field manipulation experiment where we provided a terrestrial invertebrate subsidy to red-spotted masu salmon. Individuals in stream reaches that received a subsidy had, on average, a 53% increase in growth rate relative to those in control reaches. This increased growth resulted in a greater proportion of individuals reaching the threshold body size and smolting in the autumn. Consequently, 19-55% of females in subsidized reaches became migratory, whereas 0-14% became migratory in the control reaches. Our findings highlight seasonal ecosystem linkage as a key ecosystem property for maintaining migratory polymorphism in partially migratory animals.

Partial migration in diadromous fishes drives the allocation of subsidies across the freshwater-marine ecotone

Migratory animals can act as cross-boundary subsidies sustaining ecosystem functioning, such as diadromous fishes that migrate between fresh water and seawater and carry nutrients and energy across the freshwater-marine ecotone. Frequency and timing of migration are however highly variable within and among populations. We hypothesized that in catadromous fishes (i.e., diadromous fishes that grow in freshwater and spawn in the sea, such as eels), the import of subsidies by migratory juveniles could outweigh the export of subsidies by adults due to skipped spawning migration. We used the diamond mullet Planiliza ordensis, as a model species, and determined life-history traits using a combination of length-to-age data, acoustic telemetry and otolith (fish ear stone) microchemistry. We used a mass balance approach to model individual mass acquisition and allocation, and extended our model to other life-history strategies. Our results showed high intra-population variation of migratory behaviour in P. ordensis, with few individuals migrating every year to spawn. We estimated that an individual P. ordensis acted as a net 42.6g biomass subsidy in fresh water, representing a retention of more than 50% of the juvenile mass at freshwater entry. Our model predicts that skipped spawning is likely to alter the allocation of subsidies in diadromous species, highlighting the important effects of individual variation in migratory behaviour on fluxes of energy and nutrient at ecosystem scales. We encourage future studies to consider how variation in migratory behaviour is likely to affect the direction and magnitude of biomass fluxes across ecotone boundaries.

A methodological roadmap to quantify animal-vectored spatial ecosystem subsidies

Energy, nutrients and organisms move over landscapes, connecting ecosystems across space and time. Meta-ecosystem theory investigates the emerging properties of local ecosystems coupled spatially by these movements of organisms and matter, by explicitly tracking exchanges of multiple substances across ecosystem borders. To date, meta-ecosystem research has focused mostly on abiotic flows-neglecting biotic nutrient flows. However, recent work has indicated animals act as spatial nutrient vectors when they transport nutrients across landscapes in the form of excreta, egesta and their own bodies. Partly due to its high level of abstraction, there are few empirical tests of meta-ecosystem theory. Furthermore, while animals may be viewed as important mediators of ecosystem functions, better integration of tools is needed to develop predictive insights of their relative roles and impacts on diverse ecosystems. We present a methodological roadmap that explains how to do such integration by discussing how to combine insights from movement, foraging and ecosystem ecology to develop a coherent understanding of animal-vectored nutrient transport on meta-ecosystems processes. We discuss how the slate of newly developed technologies and methods-tracking devices, mechanistic movement models, diet reconstruction techniques and remote sensing-that when integrated have the potential to advance the quantification of animal-vectored nutrient flows and increase the predictive power of meta-ecosystem theory. We demonstrate that by integrating novel and established tools of animal ecology, ecosystem ecology and remote sensing, we can begin to identify and quantify animal-mediated nutrient translocation by large animals. We also provide conceptual examples that show how our proposed integration of methodologies can help investigate ecosystem impacts of large animal movement. We conclude by describing practical advancements to understanding cross-ecosystem contributions of animals on the move. Understanding the mechanisms by which animals shape ecosystem dynamics is important for ongoing conservation, rewilding and restoration initiatives around the world, and for developing more accurate models of ecosystem nutrient budgets. Our roadmap will enable ecologists to better qualify and quantify animal-mediated nutrient translocation for animals on the move.

Temporal dynamics of migration-linked genetic variation are driven by streamflows and riverscape permeability

Landscape permeability is often explored spatially, but may also vary temporally. Landscape permeability, including partial barriers, influences migratory animals that move across the landscape. Partial barriers are common in rivers where barrier passage varies with streamflow. We explore the influence of partial barriers on the spatial and temporal distribution of migration‐linked genotypes of Oncorhynchus mykiss, a salmonid fish with co‐occurring resident and migratory forms, in tributaries to the South Fork Eel River, California, USA, Elder and Fox Creeks. We genotyped >4,000 individuals using RAD‐capture and classified individuals as resident, heterozygous or migratory genotypes using life history‐associated loci. Across four years of study (2014–2017), the permeability of partial barriers varied across dry and wet years. In Elder Creek, the largest waterfall was passable for adults migrating up‐river 4–39 days each year. In this stream, the overall spatial pattern, with fewer migratory genotypes above the waterfall, remained true across dry and wet years (67%–76% of migratory alleles were downstream of the waterfall). We also observed a strong relationship between distance upstream and proportion of migratory alleles. In Fox Creek, the primary barrier is at the mouth, and we found that the migratory allele frequency varied with the annual timing of high flow events. In years when rain events occurred during the peak breeding season, migratory allele frequency was high (60%–68%), but otherwise it was low (30% in two years). We highlight that partial barriers and landscape permeability can be temporally dynamic, and this effect can be observed through changing genotype frequencies in migratory animals.