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Awwadi FF, Alwahsh MI, Turnbull MM, Landee CP. Halogen bond and polymorphism in trans-bis(2-iodo-5-halopyridine)dihalocopper( ii) complexes: crystallographic, theoretical and magnetic studies. CrystEngComm 2023. [DOI: 10.1039/d2ce01711c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/30/2023]
Abstract
As the halogen atom on position 5 of the 2I5YP ligand gets heavier the probability of crystallizing the syn-conformer increases; 2I5Cl-Cl crystallizes as the anti-conformer whereas 2I5Br-Cl crystallizes as syn- and anti-conformers.
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Zaguzin AS, Sukhikh TS, Sakhapov IF, Fedin VP, Sokolov MN, Adonin SA. Zn(II) and Co(II) 3D Coordination Polymers Based on 2-Iodoterephtalic Acid and 1,2-bis(4-pyridyl)ethane: Structures and Sorption Properties. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27041305. [PMID: 35209092 PMCID: PMC8876937 DOI: 10.3390/molecules27041305] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Revised: 02/04/2022] [Accepted: 02/06/2022] [Indexed: 11/28/2022]
Abstract
Metal-organic frameworks [M2(2-I-bdc)2bpe] (M = Zn(II) (1), Co(II) (2), 2-I-bdc = 2-iodoterephtalic acid, and bpe = 1,2-bis(4-pyridyl)ethane) were prepared and characterized by X-ray diffractometry. Both compounds retain their 3D structure after the removal of guest DMF molecules. Selectivity of sorption of different organic substrates from the gas phase was investigated for both complexes.
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Affiliation(s)
- Alexander S. Zaguzin
- South Ural State University, Lenina St. 76, 454080 Chelyabinsk, Russia; (A.S.Z.); (I.F.S.)
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Taisiya S. Sukhikh
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Ilyas F. Sakhapov
- South Ural State University, Lenina St. 76, 454080 Chelyabinsk, Russia; (A.S.Z.); (I.F.S.)
- Arbuzov Institute of Organic and Physical Chemistry, RAS, Arbuzov St. 8, 420088 Kazan, Russia
| | - Vladimir P. Fedin
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Maxim N. Sokolov
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Sergey A. Adonin
- South Ural State University, Lenina St. 76, 454080 Chelyabinsk, Russia; (A.S.Z.); (I.F.S.)
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
- Correspondence:
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Alwahsh MI, Awwadi FF, Kailani MH. Polymorphism and isomorphism in trans-bis(2,5-diiodopyridine)dihalocopper( ii) complexes: theoretical and crystallographic studies. NEW J CHEM 2022. [DOI: 10.1039/d2nj03373a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two conformational polymorphs of [Cu(25dIpy)2Cl2] have been prepared, the anti-polymorph crystallized from 2-propanol at room temperature (green) and the syn-polymorph crystallized from acetonitrile at 60 °C (brown).
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Affiliation(s)
- Manal I. Alwahsh
- Department of Chemistry, The University of Jordan, Amman 11942, Jordan
| | - Firas F. Awwadi
- Department of Chemistry, The University of Jordan, Amman 11942, Jordan
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Liu GN, Li MK, Xu RD, Zhang NN, Quan XJ, Qian BJ, Lu YH, Li C. A halogen bonding assembled hybrid copper halide framework as a promising hypotoxicity photodetector. Inorg Chem Front 2022. [DOI: 10.1039/d2qi01441f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
The first halogen bonding assembled three-dimensional hybrid copper iodide was obtained by a facile and sustainable “All-in-One” synthesis strategy and shows great application potential as a hypotoxicity photodetector.
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Affiliation(s)
- Guang-Ning Liu
- School of Chemistry and Chemical Engineering, University of Jinan, Jinan, Shandong 250022, PR China
| | - Ming-Kun Li
- School of Chemistry and Chemical Engineering, University of Jinan, Jinan, Shandong 250022, PR China
| | - Rang-Dong Xu
- School of Chemistry and Chemical Engineering, University of Jinan, Jinan, Shandong 250022, PR China
| | - Ning-Ning Zhang
- College of Chemistry and Chemical Engineering, Liaocheng University, Liaocheng 252059, PR China
| | - Xin-Jiao Quan
- School of Chemistry and Chemical Engineering, University of Jinan, Jinan, Shandong 250022, PR China
| | - Bing-Jing Qian
- School of Chemistry and Chemical Engineering, University of Jinan, Jinan, Shandong 250022, PR China
| | - Yi-Han Lu
- School of Chemistry and Chemical Engineering, University of Jinan, Jinan, Shandong 250022, PR China
| | - Cuncheng Li
- School of Chemistry and Chemical Engineering, University of Jinan, Jinan, Shandong 250022, PR China
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Zn(II) Heteroleptic Halide Complexes with 2-Halopyridines: Features of Halogen Bonding in Solid State. Molecules 2021; 26:molecules26113393. [PMID: 34205151 PMCID: PMC8199927 DOI: 10.3390/molecules26113393] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2021] [Revised: 05/28/2021] [Accepted: 06/02/2021] [Indexed: 12/29/2022] Open
Abstract
Reactions between Zn(II) dihalides and 2-halogen-substituted pyridines 2-XPy result in a series of heteroleptic molecular complexes [(2-XPy)2ZnY2] (Y = Cl, X = Cl (1), Br (2), I (3); Y = Br, X = Cl (4), Br (5), I (6), Y = I, X = Cl (7), Br (8), and I (9)). Moreover, 1-7 are isostructural (triclinic), while 8 and 9 are monoclinic. In all cases, halogen bonding plays an important role in formation of crystal packing. Moreover, 1-9 demonstrate luminescence in asolid state; for the best emitting complexes, quantum yield (QY) exceeds 21%.
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Vershinin MA, Adonin SA. CRYSTAL STRUCTURES OF CoCl2·6H2O REACTION PRODUCTS
WITH 2-METHYLPYRIDINE AND 2,6-DIMETHYLPYRIDINE. J STRUCT CHEM+ 2021. [DOI: 10.1134/s0022476621010108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Hydrogen and Halogen Bond Mediated Coordination Polymers of Chloro-Substituted Pyrazin-2-Amine Copper(I) Bromide Complexes. CHEMISTRY 2020. [DOI: 10.3390/chemistry2030045] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
Abstract
A new class of six mono- (1; 3-Cl-, 2; 5-Cl-, 3; 6-Cl-) and di-(4; 3,6-Cl, 5; 5,6-Cl-, 6; 3,5-Cl-) chloro-substituted pyrazin-2-amine ligands (1–6) form complexes with copper (I) bromide, to give 1D and 2D coordination polymers through a combination of halogen and hydrogen bonding that were characterized by X-ray diffraction analysis. These Cu(I) complexes were prepared indirectly from the ligands and CuBr2 via an in situ redox process in moderate to high yields. Four of the pyrazine ligands, 1, 4–6 were found to favor a monodentate mode of coordination to one CuI ion. The absence of a C6-chloro substituent in ligands 1, 2 and 6 supported N1–Cu coordination over the alternative N4–Cu coordination mode evidenced for ligands 4 and 5. These monodentate systems afforded predominantly hydrogen bond (HB) networks containing a catenated (μ3-bromo)-CuI ‘staircase’ motif, with a network of ‘cooperative’ halogen bonds (XB), leading to infinite polymeric structures. Alternatively, ligands 2 and 3 preferred a μ2-N,N’ bridging mode leading to three different polymeric structures. These adopt the (μ3-bromo)-CuI ‘staircase’ motif observed in the monodentate ligands, a unique single (μ2-bromo)-CuI chain, or a discrete Cu2Br2 rhomboid (μ2-bromo)-CuI dimer. Two main HB patterns afforded by self-complimentary dimerization of the amino pyrazines described by the graph set notation R22(8) and non-cyclic intermolecular N–H∙∙∙N’ or N–H∙∙∙Br–Cu leading to infinite polymeric structures are discussed. The cooperative halogen bonding between C–Cl∙∙∙Cl–C and the C–Cl∙∙∙Br–Cu XB contacts are less than the sum of the van der Waals radii of participating atoms, with the latter ranging from 3.4178(14) to 3.582(15) Å. In all cases, the mode of coordination and pyrazine ring substituents affect the pattern of HBs and XBs in these supramolecular structures.
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Abstract
Three complexes [Co(2-XPy)2Cl2] (X = Cl, Br, and I) were prepared and characterized, representing a rare case of isostructurality within the Cl-Br-I row. The nature of halogen bonding (XB) in a solid state was studied by DFT calculations, revealing a tendency of XB energy growth for heavier halogens.
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Adonin SA, Novikov AS, Chernova KV, Vinnik DA, Taskaev SV, Korolkov IV, Ilyina EV, Pavlov AA, Novikov VV, Sokolov MN, Fedin VP. Heteroleptic copper(II) complexes with 2-bromo-5-methylpyridine: Structures, features of non-covalent interactions and magnetic behavior. Inorganica Chim Acta 2020. [DOI: 10.1016/j.ica.2019.119333] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Halogen Bonds in 2,5-Dihalopyridine-Copper(I) Halide Coordination Polymers. MATERIALS 2019; 12:ma12203305. [PMID: 31614477 PMCID: PMC6829255 DOI: 10.3390/ma12203305] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Revised: 09/29/2019] [Accepted: 10/03/2019] [Indexed: 01/07/2023]
Abstract
Two series of 2,5-dihalopyridine-Cu(I)A (A = I, Br) complexes based on 2-X-5-iodopyridine and 2-X-5-bromopyridine (X = F, Cl, Br and I) are characterized by using single-crystal X-ray diffraction analysis to examine the nature of C2-X2···A-Cu and C5-X5···A-Cu halogen bonds. The reaction of the 2,5-dihalopyridines and Cu(I) salts allows the synthesis of eight 1-D coordination polymers and a discrete structure. The resulting Cu(I)-complexes are linked by C-X···A-Cu halogen bonds forming 3-D supramolecular networks. The C-X···A-Cu halogen bonds formed between halopyridine ligands and copper(I)-bound halide ions are stronger than C-X···X'-C interactions between two 2,5-dihalopyridine ligands. The C5-I5···I-Cu and C5-Br5···Br-Cu halogens bonds are shorter for C2-fluorine than C2-chlorine due to the greater electron-withdrawing power of fluorine. In 2,5-diiodopyridine-Cu(I)Br complex, the shorter C2-I2···Br-Cu [3.473(5) Å] distances are due to the combined polarization of C2-iodine by C2-I2···Cu interactions and para-electronic effects offered by the C5-iodine, whilst the long halogen bond contacts for C5-I5···Br-Cu [3.537(5) Å] are indicative that C2-iodine has a less para-electronic influence on the C5-iodine. In 2-fluoro-5-X-pyridine-Cu(I) complexes, the C2-fluorine is halogen bond passive, while the other C2-halogens in 2,5-dihalopyridine-Cu(I), including C2-chlorine, participate in halogen bonding interactions.
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Kryukova MA, Ivanov DM, Kinzhalov MA, Novikov AS, Smirnov AS, Bokach NA, Yu Kukushkin V. Four-Center Nodes: Supramolecular Synthons Based on Cyclic Halogen Bonding. Chemistry 2019; 25:13671-13675. [PMID: 31232494 DOI: 10.1002/chem.201902264] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2019] [Revised: 06/21/2019] [Indexed: 12/30/2022]
Abstract
The isocyanide trans-[PdBr2 (CNC6 H4 -4-X')2 ] (X'=Br, I) and nitrile trans-[PtX2 (NCC6 H4 -4-X')2 ] (X/X'=Cl/Cl, Cl/Br, Br/Cl, Br/Br) complexes exhibit similar structural motif in the solid state, which is determined by hitherto unreported four-center nodes formed by cyclic halogen bonding. Each node is built up by four Type II C-X'⋅⋅⋅X-M halogen-bonding contacts and include one Type I M-X⋅⋅⋅X-M interaction, thus giving the rhombic-like structure. These nodes serve as supramolecular synthons to form 2D layers or double chains of molecules linked by a halogen bond. Results of DFT calculations indicate that all contacts within the nodes are typical noncovalent interactions with the estimated strengths in the range 0.6-2.9 kcal mol-1 .
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Affiliation(s)
- Mariya A Kryukova
- Institute of Chemistry, Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Daniil M Ivanov
- Institute of Chemistry, Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Mikhail A Kinzhalov
- Institute of Chemistry, Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Alexander S Novikov
- Institute of Chemistry, Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Andrey S Smirnov
- Institute of Chemistry, Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Nadezhda A Bokach
- Institute of Chemistry, Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Vadim Yu Kukushkin
- Institute of Chemistry, Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
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Pike SJ, Hunter CA, Brammer L, Perutz RN. Benchmarking of Halogen Bond Strength in Solution with Nickel Fluorides: Bromine versus Iodine and Perfluoroaryl versus Perfluoroalkyl Donors. Chemistry 2019; 25:9237-9241. [PMID: 30985028 PMCID: PMC6771525 DOI: 10.1002/chem.201900924] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2019] [Indexed: 12/18/2022]
Abstract
The energetics of halogen bond formation in solution have been investigated for a series of nickel fluoride halogen bond acceptors; trans-[NiF(2-C5 NF4 )(PEt3 )2 ] (A1), trans-[NiF{2-C5 NF3 (4-H)}(PEt3 )2 ] (A2), trans-[NiF{2-C5 NF3 (4-NMe2 )}(PEt3 )2 ] (A3) and trans-[NiF{2-C5 NF2 H(4-CF3 )}(PCy3 )2 ] (A4) with neutral organic halogen bond donors, iodopentafluorobenzene (D1), 1-iodononafluorobutane (D2) and bromopentafluorobenzene (D3), in order to establish the significance of changes from perfluoroaryl to perfluoroalkyl donors and from iodine to bromine donors. 19 F NMR titration experiments have been employed to obtain the association constants, enthalpy, and entropy for the halogen bond formed between these donor-acceptor partners in protiotoluene. For A2-A4, association constants of the halogen bonds formed with iodoperfluoroalkane (D2) are consistently larger than those obtained for analogous complexes with the iodoperfluoroarene (D1). For complexes formed with A2-A4, the strength of the halogen bond is significantly lowered upon modification of the halogen donor atom from I (in D1) to Br (in D3) (for D1: 5≤K285 ≤12 m-1 , for D3: 1.0≤K193 ≤1.6 m-1 ). The presence of the electron donating NMe2 substituent on the pyridyl ring of acceptor A3 led to an increase in -ΔH, and the association constants of the halogen bond complexes formed with D1-D3, compared to those formed by A1, A2 and A4 with the same donors.
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Affiliation(s)
- Sarah J. Pike
- Department of ChemistryUniversity of York, HeslingtonYorkYO10 5DDUK
| | | | - Lee Brammer
- Department of ChemistryUniversity of Sheffield, Brook HillSheffieldS3 7HFUK
| | - Robin N. Perutz
- Department of ChemistryUniversity of York, HeslingtonYorkYO10 5DDUK
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