Real-time biomechanics using the finite element method and machine learning: Review and perspective

Artificial intelligence for treatment planning and soft tissue outcome prediction of orthognathic treatment: A systematic review

BACKGROUND

The accuracy of artificial intelligence (AI) in treatment planning and outcome prediction in orthognathic treatment (OGT) has not been systematically reviewed.

OBJECTIVES

To determine the accuracy of AI in treatment planning and soft tissue outcome prediction in OGT.

DESIGN

Systematic review.

DATA SOURCES

Unrestricted search of indexed databases and reference lists of included studies.

DATA SELECTION

Clinical studies that addressed the focused question 'Is AI useful for treatment planning and soft tissue outcome prediction in OGT?' were included.

DATA EXTRACTION

Study screening, selection and data extraction were performed independently by two authors. The risk of bias (RoB) was assessed using the Cochrane Collaboration's RoB and ROBINS-I tools for randomised and non-randomised clinical studies, respectively.

DATA SYNTHESIS

Eight clinical studies (seven retrospective cohort studies and one randomised controlled study) were included. Four studies assessed the role of AI for treatment decision making; and four studies assessed the accuracy of AI in soft tissue outcome prediction after OGT. In four studies, the level of agreement between AI and non-AI decision making was found to be clinically acceptable (at least 90%). In four studies, it was shown that AI can be used for soft tissue outcome prediction after OGT; however, predictions were not clinically acceptable for the lip and chin areas. All studies had a low to moderate RoB.

LIMITATIONS

Due to high methodological inconsistencies among the included studies, it was not possible to conduct a meta-analysis and reporting biases assessment.

CONCLUSION

AI can be a useful aid to traditional treatment planning by facilitating clinical treatment decision making and providing a visualisation tool for soft tissue outcome prediction in OGT.

REGISTRATION

PROSPERO CRD42022366864.

Construction of multi-component finite element model to predict biomechanical behaviour of breasts during running and quantification of the stiffness impact of internal structure

This study aims to investigate the biomechanical behaviour and the stiffness impact of the breast internal components during running. To achieve this, a novel nonlinear multi-component dynamic finite element method (FEM) has been established, which uses experimental data obtained via 4D scanning technology and a motion capture system. The data are used to construct a geometric model that comprises the rigid body, layers of soft tissues, skin, pectoralis major muscle, fat, ligaments and glandular tissues. The traditional point-to-point method has a relative mean absolute error of less than 7.92% while the latest surface-to-surface method has an average Euclidean distance (d) of 7.05 mm, validating the simulated results. After simulating the motion of the different components of the breasts, the displacement analysis confirms that when the motion reaches the moment of largest displacement, the displacement of the breast components is proportional to their distance from the chest wall. A biomechanical analysis indicates that the stress sustained by the breast components in ascending order is the glandular tissues, pectoralis major muscle, adipose tissues, and ligaments. The ligaments provide the primary support during motion, followed by the pectoralis major muscle. In addition, specific stress points of the breast components are identified. The stiffness impact experiment indicates that compared with ligaments, the change of glandular tissue stiffness had a slightly more obvious effect on the breast surface. The findings serve as a valuable reference for the medical field and sports bra industry to enhance breast protection during motion.

Comparing regularized Kelvinlet functions and the finite element method for registration of medical images to sparse organ data

Image-guided surgery collocates patient-specific data with the physical environment to facilitate surgical decision making. Unfortunately, these guidance systems commonly become compromised by intraoperative soft-tissue deformations. Nonrigid image-to-physical registration methods have been proposed to compensate for deformations, but clinical utility requires compatibility of these techniques with data sparsity and temporal constraints in the operating room. While finite element models can be effective in sparse data scenarios, computation time remains a limitation to widespread deployment. This paper proposes a registration algorithm that uses regularized Kelvinlets, which are analytical solutions to linear elasticity in an infinite domain, to overcome these barriers. This algorithm is demonstrated and compared to finite element-based registration on two datasets: a phantom liver deformation dataset and an in vivo breast deformation dataset. The regularized Kelvinlets algorithm resulted in a significant reduction in computation time compared to the finite element method. Accuracy as evaluated by target registration error was comparable between methods. Average target registration errors were 4.6 ± 1.0 and 3.2 ± 0.8 mm on the liver dataset and 5.4 ± 1.4 and 6.4 ± 1.5 mm on the breast dataset for the regularized Kelvinlets and finite element method, respectively. Limitations of regularized Kelvinlets include the lack of organ-specific geometry and the assumptions of linear elasticity and infinitesimal strain. Despite limitations, this work demonstrates the generalizability of regularized Kelvinlets registration on two soft-tissue elastic organs. This method may improve and accelerate registration for image-guided surgery, and it shows the potential of using regularized Kelvinlets on medical imaging data.

Auxetics and FEA: Modern Materials Driven by Modern Simulation Methods

Auxetics are materials, metamaterials or structures which expand laterally in at least one cross-sectional plane when uniaxially stretched, that is, have a negative Poisson's ratio. Over these last decades, these systems have been studied through various methods, including simulations through finite elements analysis (FEA). This simulation tool is playing an increasingly significant role in the study of materials and structures as a result of the availability of more advanced and user-friendly commercially available software and higher computational power at more reachable costs. This review shows how, in the last three decades, FEA proved to be an essential key tool for studying auxetics, their properties, potential uses and applications. It focuses on the use of FEA in recent years for the design and optimisation of auxetic systems, for the simulation of how they behave when subjected to uniaxial stretching or compression, typically with a focus on identifying the deformation mechanism which leads to auxetic behaviour, and/or, for the simulation of their characteristics and behaviour under different circumstances such as impacts.

Pre-selection blade size choice for the microsurgical clipping of cerebral artery aneurysms: A numerical study

BACKGROUND

Brain strokes comprise the third leading cause of death worldwide. Microsurgical clipping is recognized as being one of the most effective approaches to the treatment of brain aneurysms. The incomplete closure of the distal-side aneurysm neck is the most common cause of the persistent filling of the dome. Since the diameter of the neck increases when the neck of the aneurysm is squeezed closed by the blades of the clip, the blades should be correspondingly longer. This study provided an assessment of whether the presurgical selection of clips using a 3D planning system is feasible in terms of selecting the most suitable clip for aneurysm occlusion.

METHODS

The computational model was created based on computer tomography data obtained from nine brain aneurysms. The closing of the aneurysm was provided in two steps. The first the length of the blades used for closing corresponded to the length of the aneurysm neck as confirmed by the radiological measurements. The second the length of the blades was adjusted according to stage one, so as to determine the minimum required for the closure of all the gaps in the interior space of the aneurysm neck.

RESULTS

No differences were detected between the radiological measurement of the aneurysm neck size and the measurements obtained from the reconstructed stereolithographic 3D models. It was observed that the size of the aneurysm neck increased following clipping by 40% to 60% of its original size. The larger the aneurysm neck, the greater the deformation of the aneurysm.

CONCLUSION

Firstly, the 3D reconstruction of CT/MRI data did not result in any loss of accuracy and the measurement of the neck of the aneurysm was the same for both of the methods employed. The second, and more important, outcome was that the deformation of the neck of the cerebral aneurysm is at least 1.4x greater than its original size. This information is essential in terms of the pre-selection of the size of the clip.

Estimation of the biomechanical mammographic deformation of the breast using machine learning models

BACKGROUND

A typical problem in the registration of MRI and X-ray mammography is the nonlinear deformation applied to the breast during mammography. We have developed a method for virtual deformation of the breast using a biomechanical model automatically constructed from MRI. The virtual deformation is applied in two steps: unloaded state estimation and compression simulation. The finite element method is used to solve the deformation process. However, the extensive computational cost prevents its usage in clinical routine.

METHODS

We propose three machine learning models to overcome this problem: an extremely randomized tree (first model), extreme gradient boosting (second model), and deep learning-based bidirectional long short-term memory with an attention layer (third model) to predict the deformation of a biomechanical model. We evaluated our methods with 516 breasts with realistic compression ratios up to 76%.

FINDINGS

We first applied one-fold validation, in which the second and third models performed better than the first model. We then applied ten-fold validation. For the unloaded state estimation, the median RMSE for the second and third models is 0.8 mm and 1.2 mm, respectively. For the compression, the median RMSE is 3.4 mm for both models. We evaluated correlations between model accuracy and characteristics of the clinical datasets such as compression ratio, breast volume, and tissue types.

INTERPRETATION

Using the proposed models, we achieved accurate results comparable to the finite element model, with a speedup of factor 240 using the extreme gradient boosting model. These proposed models can replace the finite element model simulation, enabling clinically relevant real-time application.

The Potential of Deep Learning to Advance Clinical Applications of Computational Biomechanics

When combined with patient information provided by advanced imaging techniques, computational biomechanics can provide detailed patient-specific information about stresses and strains acting on tissues that can be useful in diagnosing and assessing treatments for diseases and injuries. This approach is most advanced in cardiovascular applications but can be applied to other tissues. The challenges for advancing computational biomechanics for real-time patient diagnostics and treatment include errors and missing information in the patient data, the large computational requirements for the numerical solutions to multiscale biomechanical equations, and the uncertainty over boundary conditions and constitutive relations. This review summarizes current efforts to use deep learning to address these challenges and integrate large data sets and computational methods to enable real-time clinical information. Examples are drawn from cardiovascular fluid mechanics, soft-tissue mechanics, and bone biomechanics. The application of deep-learning convolutional neural networks can reduce the time taken to complete image segmentation, and meshing and solution of finite element models, as well as improving the accuracy of inlet and outlet conditions. Such advances are likely to facilitate the adoption of these models to aid in the assessment of the severity of cardiovascular disease and the development of new surgical treatments.

Prediction of subjective cognitive decline after corpus callosum infarction by an interpretable machine learning-derived early warning strategy

Background and purpose

Corpus callosum (CC) infarction is an extremely rare subtype of cerebral ischemic stroke, however, the symptoms of cognitive impairment often fail to attract early attention of patients, which seriously affects the long-term prognosis, such as high mortality, personality changes, mood disorders, psychotic reactions, financial burden and so on. This study seeks to develop and validate models for early predicting the risk of subjective cognitive decline (SCD) after CC infarction by machine learning (ML) algorithms.

Methods

This is a prospective study that enrolled 213 (only 3.7%) CC infarction patients from a nine-year cohort comprising 8,555 patients with acute ischemic stroke. Telephone follow-up surveys were carried out for the patients with definite diagnosis of CC infarction one-year after disease onset, and SCD was identified by Behavioral Risk Factor Surveillance System (BRFSS) questionnaire. Based on the significant features selected by the least absolute shrinkage and selection operator (LASSO), seven ML models including Extreme Gradient Boosting (XGBoost), Logistic Regression (LR), Light Gradient Boosting Machine (LightGBM), Adaptive Boosting (AdaBoost), Gaussian Naïve Bayes (GNB), Complement Naïve Bayes (CNB), and Support vector machine (SVM) were established and their predictive performances were compared by different metrics. Importantly, the SHapley Additive exPlanations (SHAP) was also utilized to examine internal behavior of the highest-performance ML classifier.

Results

The Logistic Regression (LR)-model performed better than other six ML-models in SCD predictability after the CC infarction, with the area under the receiver characteristic operator curve (AUC) of 77.1% in the validation set. Using LASSO and SHAP analysis, we found that infarction subregions of CC infarction, female, 3-month modified Rankin Scale (mRS) score, age, homocysteine, location of angiostenosis, neutrophil to lymphocyte ratio, pure CC infarction, and number of angiostenosis were the top-nine significant predictors in the order of importance for the output of LR-model. Meanwhile, we identified that infarction subregion of CC, female, 3-month mRS score and pure CC infarction were the factors which independently associated with the cognitive outcome.

Conclusion

Our study firstly demonstrated that the LR-model with 9 common variables has the best-performance to predict the risk of post-stroke SCD due to CC infarcton. Particularly, the combination of LR-model and SHAP-explainer could aid in achieving personalized risk prediction and be served as a decision-making tool for early intervention since its poor long-term outcome.

The Digital Twin: A Potential Solution for the Personalized Diagnosis and Treatment of Musculoskeletal System Diseases

Due to the high prevalence and rates of disability associated with musculoskeletal system diseases, more thorough research into diagnosis, pathogenesis, and treatments is required. One of the key contributors to the emergence of diseases of the musculoskeletal system is thought to be changes in the biomechanics of the human musculoskeletal system. However, there are some defects concerning personal analysis or dynamic responses in current biomechanical research methodologies. Digital twin (DT) was initially an engineering concept that reflected the mirror image of a physical entity. With the application of medical image analysis and artificial intelligence (AI), it entered our lives and showed its potential to be further applied in the medical field. Consequently, we believe that DT can take a step towards personalized healthcare by guiding the design of industrial personalized healthcare systems. In this perspective article, we discuss the limitations of traditional biomechanical methods and the initial exploration of DT in musculoskeletal system diseases. We provide a new opinion that DT could be an effective solution for musculoskeletal system diseases in the future, which will help us analyze the real-time biomechanical properties of the musculoskeletal system and achieve personalized medicine.

A review of numerical simulation in transcatheter aortic valve replacement decision optimization

BACKGROUND

Recent trials indicated a further expansion of clinical indication of transcatheter aortic valve replacement to younger and low-risk patients. Factors related to longer-term complications are becoming more important for use in these patients. Accumulating evidence indicates that numerical simulation plays a significant role in improving the outcome of transcatheter aortic valve replacement. Understanding mechanical features' magnitude, pattern, and duration is a topic of ongoing relevance.

METHODS

We searched the PubMed database using keywords such as "transcatheter aortic valve replacement" and "numerical simulation" and reviewed and summarized relevant literature.

FINDINGS

This review integrated recently published evidence into three subtopics: 1) prediction of transcatheter aortic valve replacement outcomes through numerical simulation, 2) implications for surgeons, and 3) trends in transcatheter aortic valve replacement numerical simulation.

INTERPRETATIONS

Our study offers a comprehensive overview of the utilization of numerical simulation in the context of transcatheter aortic valve replacement, and highlights the advantages, potential challenges from a clinical standpoint. The convergence of medicine and engineering plays a pivotal role in enhancing the outcomes of transcatheter aortic valve replacement. Numerical simulation has provided evidence of potential utility for tailored treatments.

Real-time simulation of viscoelastic tissue behavior with physics-guided deep learning

Finite element methods (FEM) are popular approaches for simulation of soft tissues with elastic or viscoelastic behavior. However, their usage in real-time applications, such as in virtual reality surgical training, is limited by computational cost. In this application scenario, which typically involves transportable simulators, the computing hardware severely constrains the size or the level of details of the simulated scene. To address this limitation, data-driven approaches have been suggested to simulate mechanical deformations by learning the mapping rules from FEM generated datasets. Prior data-driven approaches have ignored the physical laws of the underlying engineering problem and have consequently been restricted to simulation cases of simple hyperelastic materials where the temporal variations were effectively ignored. However, most surgical training scenarios require more complex hyperelastic models to deal with the viscoelastic properties of tissues. This type of material exhibits both viscous and elastic behaviors when subjected to external force, requiring the implementation of time-dependant state variables. Herein, we propose a deep learning method for predicting displacement fields of soft tissues with viscoelastic properties. The main contribution of this work is the use of a physics-guided loss function for the optimization of the deep learning model parameters. The proposed deep learning model is based on convolutional (CNN) and recurrent layers (LSTM) to predict spatiotemporal variations. It is augmented with a mass conservation law in the lost function to prevent the generation of physically inconsistent results. The deep learning model is trained on a set of FEM datasets that are generated from a commercially available state-of-the-art numerical neurosurgery simulator. The use of the physics-guided loss function in a deep learning model has led to a better generalization in the prediction of deformations in unseen simulation cases. Moreover, the proposed method achieves a better accuracy over the conventional CNN models, where improvements were observed in unseen tissue from 8% to 30% depending on the magnitude of external forces. It is hoped that the present investigation will help in filling the gap in applying deep learning in virtual reality simulators, hence improving their computational performance (compared to FEM simulations) and ultimately their usefulness.

Simulation of Postoperative Facial Appearances via Geometric Deep Learning for Efficient Orthognathic Surgical Planning

Orthognathic surgery corrects jaw deformities to improve aesthetics and functions. Due to the complexity of the craniomaxillofacial (CMF) anatomy, orthognathic surgery requires precise surgical planning, which involves predicting postoperative changes in facial appearance. To this end, most conventional methods involve simulation with biomechanical modeling methods, which are labor intensive and computationally expensive. Here we introduce a learning-based framework to speed up the simulation of postoperative facial appearances. Specifically, we introduce a facial shape change prediction network (FSC-Net) to learn the nonlinear mapping from bony shape changes to facial shape changes. FSC-Net is a point transform network weakly-supervised by paired preoperative and postoperative data without point-wise correspondence. In FSC-Net, a distance-guided shape loss places more emphasis on the jaw region. A local point constraint loss restricts point displacements to preserve the topology and smoothness of the surface mesh after point transformation. Evaluation results indicate that FSC-Net achieves 15× speedup with accuracy comparable to a state-of-the-art (SOTA) finite-element modeling (FEM) method.

Multi-fidelity surrogate modeling through hybrid machine learning for biomechanical and finite element analysis of soft tissues

Biomechanical simulation enables medical researchers to study complex mechano-biological conditions, although for soft tissue modeling, it may apply highly nonlinear multi-physics theories commonly implemented by expensive finite element (FE) solvers. This is a significantly time-consuming process on a regular computer and completely inefficient in urgent situations. One remedy is to first generate a dataset of the possible inputs and outputs of the solver in order to then train an efficient machine learning (ML) model, i.e., the supervised ML-based surrogate, replacing the expensive solver to speed up the simulation. But it still requires a large number of expensive numerical samples. In this regard, we propose a hybrid ML (HML) method that uses a reduced-order model defined by the simplification of the complex multi-physics equations to produce a dataset of the low-fidelity (LF) results. The surrogate then has this efficient numerical model and an ML model that should increase the fidelity of its outputs to the level of high-fidelity (HF) results. Based on our empirical tests via a group of diverse training and numerical modeling conditions, the proposed method can improve training convergence for very limited training samples. In particular, while considerable time gains comparing to the HF numerical models are observed, training of the HML models is also significantly more efficient than the purely ML-based surrogates. From this, we conclude that this non-destructive HML implementation may increase the accuracy and efficiency of surrogate modeling of soft tissues with complex multi-physics properties in small data regimes.

AI for Health-Related Data Modeling, DCN Application Analysis

Data modeling of health-related data from Data Center (DC) has positive effects for health monitoring, disease prevention, and healthcare research. However, health-related data has the characteristics of huge, high-dimensional, and non-normalized, which are not beneficial to direct analysis, so data needs to be preprocessed before data modeling. This paper focuses on the features of health-related data, and outlier detection during data preprocessing is studied. Meanwhile, we propose an improved algorithm for health-related data based outlier detection. The experimental results reveal that the proposed outlier detection algorithm has a smaller running time, and more outliers are detected compared to three baselines. In addition, local importance based random forest feature selection algorithm is proposed to measure the importance of each feature. The experimental results indicate that the proposed algorithm can select optimal feature subset to apply health-related data.

Medical Image-Based Computational Fluid Dynamics and Fluid-Structure Interaction Analysis in Vascular Diseases

Hemodynamic factors, induced by pulsatile blood flow, play a crucial role in vascular health and diseases, such as the initiation and progression of atherosclerosis. Computational fluid dynamics, finite element analysis, and fluid-structure interaction simulations have been widely used to quantify detailed hemodynamic forces based on vascular images commonly obtained from computed tomography angiography, magnetic resonance imaging, ultrasound, and optical coherence tomography. In this review, we focus on methods for obtaining accurate hemodynamic factors that regulate the structure and function of vascular endothelial and smooth muscle cells. We describe the multiple steps and recent advances in a typical patient-specific simulation pipeline, including medical imaging, image processing, spatial discretization to generate computational mesh, setting up boundary conditions and solver parameters, visualization and extraction of hemodynamic factors, and statistical analysis. These steps have not been standardized and thus have unavoidable uncertainties that should be thoroughly evaluated. We also discuss the recent development of combining patient-specific models with machine-learning methods to obtain hemodynamic factors faster and cheaper than conventional methods. These critical advances widen the use of biomechanical simulation tools in the research and potential personalized care of vascular diseases.

Deep learning for biomechanical modeling of facial tissue deformation in orthognathic surgical planning

PURPOSE

Orthognathic surgery requires an accurate surgical plan of how bony segments are moved and how the face passively responds to the bony movement. Currently, finite element method (FEM) is the standard for predicting facial deformation. Deep learning models have recently been used to approximate FEM because of their faster simulation speed. However, current solutions are not compatible with detailed facial meshes and often do not explicitly provide the network with known boundary type information. Therefore, the purpose of this proof-of-concept study is to develop a biomechanics-informed deep neural network that accepts point cloud data and explicit boundary types as inputs to the network for fast prediction of soft-tissue deformation.

METHODS

A deep learning network was developed based on the PointNet++ architecture. The network accepts the starting facial mesh, input displacement, and explicit boundary type information and predicts the final facial mesh deformation.

RESULTS

We trained and tested our deep learning model on datasets created from FEM simulations of facial meshes. Our model achieved a mean error between 0.159 and 0.642 mm on five subjects. Including explicit boundary types had mixed results, improving performance in simulations with large deformations but decreasing performance in simulations with small deformations. These results suggest that including explicit boundary types may not be necessary to improve network performance.

CONCLUSION

Our deep learning method can approximate FEM for facial change prediction in orthognathic surgical planning by accepting geometrically detailed meshes and explicit boundary types while significantly reducing simulation time.

A Review of Finite Element Models of Ligaments in the Foot and Considerations for Practical Application

PURPOSE

Finite element (FE) modeling has been used as a research tool for investigating underlying ligaments biomechanics and orthopedic applications. However, FE models of the ligament in the foot have been developed with various configurations, mainly due to their complex 3D geometry, material properties, and boundary conditions. Therefore, the purpose of this review was to summarize the current state of finite element modeling approaches that have been used in the ?eld of ligament biomechanics, to discuss their applicability to foot ligament modeling in a practical setting, and also to acknowledge current limitations and challenges.

METHODS

A comprehensive literature search was performed. Each article was analyzed in terms of the methods used for: (a) ligament geometry, (b) material property, (c) boundary and loading condition related to its application, and (d) model verification and validation.

RESULTS

Of the reviewed studies, 80% of the studies used simplified representations of ligament geometry, the non-linear mechanical behavior of ligaments was taken into account in only 19.2% of the studies, 33% of included studies did not include any kind of validation of the FE model.

CONCLUSION

Further refinement in the functional modeling of ligaments, the micro-structure level characteristics, nonlinearity, and time-dependent response, may be warranted to ensure the predictive ability of the models.

How Artificial Intelligence and Machine Learning Is Assisting Us to Extract Meaning from Data on Bone Mechanics?

Dramatic advancements in interdisciplinary research with the fourth paradigm of science, especially the implementation of computer science, nourish the potential for artificial intelligence (AI), machine learning (ML), and artificial neural network (ANN) algorithms to be applied to studies concerning mechanics of bones. Despite recent enormous advancement in techniques, gaining deep knowledge to find correlations between bone shape, material, mechanical, and physical responses as well as properties is a daunting task. This is due to both complexity of the material itself and the convoluted shapes that this complex material forms. Moreover, many uncertainties and ambiguities exist concerning the use of traditional computational techniques that hinders gaining a full comprehension of this advanced biological material. This book chapter offers a review of literature on the use of AI, ML, and ANN in the study of bone mechanics research. A main question as to why to implement AI and ML in the mechanics of bones is fully addressed and explained. This chapter also introduces AI and ML and elaborates on the main features of ML algorithms such as learning paradigms, subtypes, main ideas with examples, performance metrics, training algorithms, and training datasets. As a frequently employed ML algorithm in bone mechanics, feedforward ANNs are discussed to make their taxonomy and working principles more readily comprehensible to researchers. A summary as well as detailed review of papers that employed ANNs to learn from collected data on bone mechanics are presented. Reviewing literature on the use of these data-driven tools is essential since their wider application has the potential to: improve clinical assessments enabling real-time simulations; avoid and/or minimize injuries; and, encourage early detection of such injuries in the first place.

Displacement voxelization to resolve mesh-image mismatch: Application in deriving dense white matter fiber strains

BACKGROUND AND OBJECTIVE

It is common to combine biomechanical modeling and medical images for multimodal analyses. However, mesh-image mismatch may occur that prevents direct information exchange. To eliminate mesh-image mismatch, we develop a simple but elegant displacement voxelization technique based on image voxel corner nodes to achieve voxel-wise strain. We then apply the technique to derive dense white matter fiber strains along whole-brain tractography (∼35 k fiber tracts consisting of ∼3.3 million sampling points) resulting from head impact.

METHODS

Displacements at image voxel corner nodes are first obtained from model simulation via scattered interpolation. Each voxel is then scaled linearly to form a unit hexahedral element. This allows convenient and efficient voxel-wise strain tensor calculation and displacement interpolation at arbitrary fiber sampling points via shape functions. Fiber strains from displacement interpolation are then compared with those from the commonly used strain tensor projection using either voxel- or element-wise strain tensors.

RESULTS

Based on a synthetic displacement field, fiber strains interpolated from voxelized displacement are considerably more accurate than those from strain tensor projection relative to the prescribed ground-truth (determinant of coefficient (R²) of 1.00 and root mean squared error (RMSE) of 0.01 vs. 0.87 and 0.10, respectively). For a set of real-world reconstructed head impacts (N = 53), the strain tensor projection method performs similarly poorly (R² of 0.80-0.90 and RMSE of 0.03-0.07), with overestimation strongly correlated with strain magnitude (Pearson correlation coefficient >0.9). Up to ∼15% of the fiber strains are overestimated by more than the lower bound of a conservative injury threshold of 0.09. The percentage increases to ∼37% when halving the threshold. Voxel interpolation is also significantly more efficient (15 s vs. 40 s for element strain tensor projection, without parallelization).

CONCLUSIONS

Voxelized displacement interpolation is considerably more accurate and efficient in deriving dense white matter fiber strains than strain tensor projection. The latter generally overestimates with overestimation magnitude strongly correlating with fiber strain magnitude. Displacement voxelization is an effective technique to eliminate mesh-image mismatch and generates a convenient image representation of tissue deformation. This technique can be generalized to broadly facilitate a diverse range of image-related biomechanical problems for multimodal analyses. The convenient image format may also promote and facilitate biomechanical data sharing in the future.

Fracture Risk of Long Bone Metastases: A Review of Current and New Decision-Making Tools for Prophylactic Surgery

Simple Summary

Long bone metastases are frequently a pivotal point in the oncological history of patients. Weakening of the bone results in pathologic fractures that not only compromise patient function but also their survival. Therefore, the main issue for tumor boards remains timely assessment of the risk of fracture, as this is a key consideration in providing preventive surgery while also avoiding overtreatment. As the Mirels scoring system takes into account both the radiological and the clinical criteria, it has been used worldwide since the 1990s. However, due to increasing concern regarding the lack of accuracy, new thresholds have been defined for the identification of impending fractures that require prophylactic surgery, on the basis of axial cortical involvement and biomechanical models involving quantitative computed tomography. The aim of this review is to establish a state-of-the-art of the risk assessment of long bone metastases fractures, from simple radiologic scores to more complex multidimensional bone models, in order to define new decision-making tools.

Abstract

Long bone pathological fractures very much reflect bone metastases morbidity in many types of cancer. Bearing in mind that they not only compromise patient function but also survival, identifying impending fractures before the actual event is one of the main concerns for tumor boards. Indeed, timely prophylactic surgery has been demonstrated to increase patient quality of life as well as survival. However, early surgery for long bone metastases remains controversial as the current fracture risk assessment tools lack accuracy. This review first focuses on the gold standard Mirels rating system. It then explores other unique imaging thresholds such as axial or circumferential cortical involvement and the merits of nuclear imaging tools. To overcome the lack of specificity, other fracture prediction strategies have focused on biomechanical models based on quantitative computed tomography (CT): computed tomography rigidity analysis (CT-RA) and finite element analysis (CT-FEA). Despite their higher specificities in impending fracture assessment, their limited availability, along with a need for standardization, have limited their use in everyday practice. Currently, the prediction of long bone pathologic fractures is a multifactorial process. In this regard, machine learning could potentially be of value by taking into account clinical survival prediction as well as clinical and improved CT-RA/FEA data.

Artificial Intelligence and Precision Medicine: A Perspective

This article aims to present how the advanced solutions of artificial intelligence and precision medicine work together to refine medical management. Multi-omics seems the most suitable approach for biological analysis of data on precision medicine and artificial intelligence. We searched PubMed and Google Scholar databases to collect pertinent articles appearing up to 5 March 2021. Genetics, oncology, radiology, and the recent coronavirus disease (COVID-19) pandemic were chosen as representative fields addressing the cross-compliance of artificial intelligence (AI) and precision medicine based on the highest number of articles, topicality, and interconnectedness of the issue. Overall, we identified and perused 1572 articles. AI is a breakthrough that takes part in shaping the Fourth Industrial Revolution in medicine and health care, changing the long-time accepted diagnostic and treatment regimens and approaches. AI-based link prediction models may be outstandingly helpful in the literature search for drug repurposing or finding new therapeutical modalities in rapidly erupting wide-scale diseases such as the recent COVID-19.

Predicting cell behaviour parameters from glioblastoma on a chip images. A deep learning approach

The broad possibilities offered by microfluidic devices in relation to massive data monitoring and acquisition open the door to the use of deep learning technologies in a very promising field: cell culture monitoring. In this work, we develop a methodology for parameter identification in cell culture from fluorescence images using Convolutional Neural Networks (CNN). We apply this methodology to the in vitro study of glioblastoma (GBM), the most common, aggressive and lethal primary brain tumour. In particular, the aim is to predict the three parameters defining the go or grow GBM behaviour, which is determinant for the tumour prognosis and response to treatment. The data used to train the network are obtained from a mathematical model, previously validated with in vitro experimental results. The resulting CNN provides remarkably accurate predictions (Pearson's ρ > 0.99 for all the parameters). Besides, it proves to be sound, to filter noise and to generalise. After training and validation with synthetic data, we predict the parameters corresponding to a real image of a microfluidic experiment. The obtained results show good performance of the CNN. The proposed technique may set the first steps towards patient-specific tools, able to predict in real-time the tumour evolution for each particular patient, thanks to a combined in vitro-in silico approach.