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Yetisir F, Poser BA, Grant PE, Adalsteinsson E, Wald LL, Guerin B. Parallel transmission 2D RARE imaging at 7T with transmit field inhomogeneity mitigation and local SAR control. Magn Reson Imaging 2022; 93:87-96. [PMID: 35940379 PMCID: PMC9789791 DOI: 10.1016/j.mri.2022.08.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2022] [Revised: 07/15/2022] [Accepted: 08/02/2022] [Indexed: 12/26/2022]
Abstract
PURPOSE We develop and test a parallel transmit (pTx) pulse design framework to mitigate transmit field inhomogeneity with control of local specific absorption rate (SAR) in 2D rapid acquisition with relaxation enhancement (RARE) imaging at 7T. METHODS We design large flip angle RF pulses with explicit local SAR constraints by numerical simulation of the Bloch equations. Parallel computation and analytical expressions for the Jacobian and the Hessian matrices are employed to reduce pulse design time. The refocusing-excitation "spokes" pulse pairs are designed to satisfy the Carr-Purcell-Meiboom-Gill (CPMG) condition using a combined magnitude least squares-least squares approach. RESULTS In a simulated dataset, the proposed approach reduced peak local SAR by up to 56% for the same level of refocusing uniformity error and reduced refocusing uniformity error by up to 59% (from 32% to 7%) for the same level of peak local SAR compared to the circularly polarized birdcage mode of the pTx array. Using explicit local SAR constraints also reduced peak local SAR by up to 46% compared to an RF peak power constrained design. The excitation and refocusing uniformity error were reduced from 20%-33% to 4%-6% in single slice phantom experiments. Phantom experiments demonstrated good agreement between the simulated excitation and refocusing uniformity profiles and experimental image shading. CONCLUSION PTx-designed excitation and refocusing CPMG pulse pairs can mitigate transmit field inhomogeneity in the 2D RARE sequence. Moreover, local SAR can be decreased significantly using pTx, potentially leading to better slice coverage, enabling larger flip angles or faster imaging.
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Affiliation(s)
- Filiz Yetisir
- Fetal-Neonatal Neuroimaging & Developmental Science Center, Boston Children's Hospital, Harvard Medical School, 300 Longwood Avenue, Boston, MA 02115, USA.
| | - Benedikt A Poser
- Department of Cognitive Neuroscience, Faculty of Psychology and Neuroscience, Maastricht University, Universiteitssingel 40, 6229 ER Maastricht, the Netherlands
| | - P Ellen Grant
- Fetal-Neonatal Neuroimaging & Developmental Science Center, Boston Children's Hospital, Harvard Medical School, 300 Longwood Avenue, Boston, MA 02115, USA; Department of Pediatrics, Harvard Medical School, 25 Shattuck Street, Boston, MA 02115, USA; Department of Radiology, Harvard Medical School, 25 Shattuck Street, Boston, MA 02115, USA
| | - Elfar Adalsteinsson
- Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, 77 MA Avenue, Cambridge, MA 02139, USA; Harvard-MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology, 77 MA Avenue, Cambridge, MA 02139, USA; Institute for Medical Engineering and Science, Massachusetts Institute of Technology, 77 MA Avenue, Cambridge, MA 02139, USA
| | - Lawrence L Wald
- Department of Radiology, Harvard Medical School, 25 Shattuck Street, Boston, MA 02115, USA; Harvard-MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology, 77 MA Avenue, Cambridge, MA 02139, USA; Athinoula A. Martinos Center for Biomedical Imaging, MA General Hospital, 149 13th Street, Charlestown, MA 02129, USA
| | - Bastien Guerin
- Department of Radiology, Harvard Medical School, 25 Shattuck Street, Boston, MA 02115, USA; Athinoula A. Martinos Center for Biomedical Imaging, MA General Hospital, 149 13th Street, Charlestown, MA 02129, USA
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He X, Auerbach EJ, Garwood M, Kobayashi N, Wu X, Metzger GJ. Parallel transmit optimized 3D composite adiabatic spectral-spatial pulse for spectroscopy. Magn Reson Med 2021; 86:17-32. [PMID: 33497006 PMCID: PMC8545499 DOI: 10.1002/mrm.28682] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Revised: 12/22/2020] [Accepted: 12/23/2020] [Indexed: 01/05/2023]
Abstract
PURPOSE To develop a 3D composite adiabatic spectral-spatial pulse for refocusing in spin-echo spectroscopy acquisitions and to compare its performance against standard acquisition methods. METHODS A 3D composite adiabatic pulse was designed by modulating a train of parallel transmit-optimized 2D subpulses with an adiabatic envelope. The spatial and spectral profiles were simulated and validated by experiments to demonstrate the feasibility of the design in both single and double spin-echo spectroscopy acquisitions. Phantom and in vivo studies were performed to evaluate the pulse performance and compared with semi-LASER with respect to localization performance, sequence timing, signal suppression, and specific absorption rate. RESULTS Simultaneous 2D spatial localization with water and lipid suppression was achieved with the designed refocusing pulse, allowing high-quality spectra to be acquired with shorter minimum TE/TR, reduced SAR, as well as adaptation to spatially varying B0 and B 1 + field inhomogeneities in both prostate and brain studies. CONCLUSION The proposed composite pulse can serve as a more SAR efficient alternative to conventional localization methods such as semi-LASER at ultrahigh field for spin echo-based spectroscopy studies. Subpulse parallel-transmit optimization provides the flexibility to manage the tradeoff among multiple design criteria to accommodate different field strengths and applications.
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Affiliation(s)
- Xiaoxuan He
- Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, Minnesota, United States
| | - Edward J. Auerbach
- Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, Minnesota, United States
| | - Michael Garwood
- Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, Minnesota, United States
| | - Naoharu Kobayashi
- Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, Minnesota, United States
| | - Xiaoping Wu
- Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, Minnesota, United States
| | - Gregory J. Metzger
- Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, Minnesota, United States
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Wenger KJ, Richter C, Burger MC, Urban H, Kaulfuss S, Harter PN, Sreeramulu S, Schwalbe H, Steinbach JP, Hattingen E, Bähr O, Pilatus U. Non-Invasive Measurement of Drug and 2-HG Signals Using 19F and 1H MR Spectroscopy in Brain Tumors Treated with the Mutant IDH1 Inhibitor BAY1436032. Cancers (Basel) 2020; 12:cancers12113175. [PMID: 33138036 PMCID: PMC7692790 DOI: 10.3390/cancers12113175] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2020] [Revised: 10/14/2020] [Accepted: 10/25/2020] [Indexed: 12/19/2022] Open
Abstract
Simple Summary Targeted therapies are of growing interest to physicians in cancer treatment. These drugs target specific genes and proteins involved in the growth and survival of cancer cells. Brain tumor therapy is complicated by the fact that not all drugs can penetrate the blood brain barrier and reach their target. We explored the non-invasive method, Magnetic Resonance Spectroscopy, for monitoring drug penetration and its effects in live animals bearing brain tumors. We were able to show the presence of the investigated drug in mouse brains and its on-target activity. Abstract Background: BAY1436032 is a fluorine-containing inhibitor of the R132X-mutant isocitrate dehydrogenase (mIDH1). It inhibits the mIDH1-mediated production of 2-hydroxyglutarate (2-HG) in glioma cells. We investigated brain penetration of BAY1436032 and its effects using 1H/19F-Magnetic Resonance Spectroscopy (MRS). Methods: 19F-Nuclear Magnetic Resonance (NMR) Spectroscopy was conducted on serum samples from patients treated with BAY1436032 (NCT02746081 trial) in order to analyze 19F spectroscopic signal patterns and concentration-time dynamics of protein-bound inhibitor to facilitate their identification in vivo MRS experiments. Hereafter, 30 mice were implanted with three glioma cell lines (LNT-229, LNT-229 IDH1-R132H, GL261). Mice bearing the IDH-mutated glioma cells received 5 days of treatment with BAY1436032 between baseline and follow-up 1H/19F-MRS scan. All other animals underwent a single scan after BAY1436032 administration. Mouse brains were analyzed by liquid chromatography-mass spectrometry (LC-MS/MS). Results: Evaluation of 1H-MRS data showed a decrease in 2-HG/total creatinine (tCr) ratios from the baseline to post-treatment scans in the mIDH1 murine model. Whole brain concentration of BAY1436032, as determined by 19F-MRS, was similar to total brain tissue concentration determined by Liquid Chromatography with tandem mass spectrometry (LC-MS/MS), with a signal loss due to protein binding. Intratumoral drug concentration, as determined by LC-MS/MS, was not statistically different in models with or without R132X-mutant IDH1 expression. Conclusions: Non-invasive monitoring of mIDH1 inhibition by BAY1436032 in mIDH1 gliomas is feasible.
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Affiliation(s)
- Katharina J. Wenger
- Institute of Neuroradiology, University Hospital Frankfurt, 60528 Frankfurt am Main, Germany; (E.H.); (U.P.)
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
- Correspondence: ; Tel.: +49-69-6301-80407
| | - Christian Richter
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
- Institute for Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance (BMRZ), Goethe University, 60438 Frankfurt am Main, Germany
| | - Michael C. Burger
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
- Department of Neurooncology, University Hospital Frankfurt, 60528 Frankfurt am Main, Germany
| | - Hans Urban
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
- Department of Neurooncology, University Hospital Frankfurt, 60528 Frankfurt am Main, Germany
| | - Stefan Kaulfuss
- Bayer AG, Research & Development, Pharmaceuticals, 13353 Berlin, Germany;
| | - Patrick N. Harter
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
- Neuropathological Institute (Edinger-Institute), University Hospital Frankfurt, 60528 Frankfurt am Main, Germany
- Frankfurt Cancer Institute (FCI), 60596 Frankfurt am Main, Germany
| | - Sridhar Sreeramulu
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
- Institute for Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance (BMRZ), Goethe University, 60438 Frankfurt am Main, Germany
| | - Harald Schwalbe
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
- Institute for Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance (BMRZ), Goethe University, 60438 Frankfurt am Main, Germany
| | - Joachim P. Steinbach
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
- Department of Neurooncology, University Hospital Frankfurt, 60528 Frankfurt am Main, Germany
| | - Elke Hattingen
- Institute of Neuroradiology, University Hospital Frankfurt, 60528 Frankfurt am Main, Germany; (E.H.); (U.P.)
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
| | - Oliver Bähr
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
- Department of Neurooncology, University Hospital Frankfurt, 60528 Frankfurt am Main, Germany
| | - Ulrich Pilatus
- Institute of Neuroradiology, University Hospital Frankfurt, 60528 Frankfurt am Main, Germany; (E.H.); (U.P.)
- German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, 60590 Frankfurt am Main, Germany; (C.R.); (M.C.B.); (H.U.); (P.N.H.); (S.S.); (H.S.); (J.P.S.); (O.B.)
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Froelich T, Mullen M, Garwood M. MRI exploiting frequency-modulated pulses and their nonlinear phase. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2020; 318:106779. [PMID: 32917297 DOI: 10.1016/j.jmr.2020.106779] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Revised: 06/15/2020] [Accepted: 06/24/2020] [Indexed: 06/11/2023]
Abstract
Frequency-modulated (FM) pulses can provide several advantages over conventional amplitude-modulated pulses in the field of MRI; however, the manner in which spins are manipulated imprints a quadratic phase on the resulting magnetization. Historically this was considered a hindrance and slowed the widespread adoption of FM pulses. This article seeks to provide a historical perspective of the different techniques that researchers have used to exploit the benefits of FM pulses and to compensate for the nonlinear phase created by this class of pulses in MRI. Expanding on existing techniques, a new method of phase compensation is presented that utilizes nonlinear gradients to mitigate the undesirable phase imparted by this class of pulses.
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Affiliation(s)
- Taylor Froelich
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN, USA.
| | - Michael Mullen
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN, USA.
| | - Michael Garwood
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN, USA.
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Green EM, Blunck Y, Tahayori B, Farrell PM, Korte JC, Johnston LA. Spin Lock Adiabatic Correction (SLAC) for B 1-insensitive pulse design at 7T. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2019; 308:106595. [PMID: 31542447 DOI: 10.1016/j.jmr.2019.106595] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Revised: 08/09/2019] [Accepted: 09/08/2019] [Indexed: 06/10/2023]
Abstract
A new framework for B1 insensitive adiabatic pulse design is proposed, denoted Spin Lock Adiabatic Correction (SLAC), which counteracts deviations from ideal behaviour through inclusion of an additional correction component during pulse design. SLAC pulses are theoretically derived, then applied to the design of enhanced BIR-4 and hyperbolic secant pulses to demonstrate practical utility of the new pulses. At 7T, SLAC pulses are shown to improve the flip angle homogeneity compared to a standard adiabatic pulse with validation in both simulations and phantom experiments, under SAR equivalent experimental conditions. The SLAC framework can be applied to any arbitrary adiabatic pulse to deliver excitation with increased B1 insensitivity.
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Affiliation(s)
- Edward M Green
- Melbourne Brain Centre Imaging Unit, The University of Melbourne, Melbourne, VIC, Australia; Department of Biomedical Engineering, The University of Melbourne, Melbourne, VIC, Australia.
| | - Yasmin Blunck
- Melbourne Brain Centre Imaging Unit, The University of Melbourne, Melbourne, VIC, Australia; Department of Biomedical Engineering, The University of Melbourne, Melbourne, VIC, Australia.
| | - Bahman Tahayori
- Department of Biomedical Engineering, The University of Melbourne, Melbourne, VIC, Australia; Department of Medical Physics and Biomedical Engineering, Shiraz University of Medical Sciences, Shiraz, Iran; Center for Neuromodulation and Pain, Shiraz, Iran.
| | - Peter M Farrell
- Department of Electrical and Electronic Engineering, The University of Melbourne, Melbourne, VIC, Australia.
| | - James C Korte
- Department of Biomedical Engineering, The University of Melbourne, Melbourne, VIC, Australia; Department of Physical Sciences, Peter MacCallum Cancer Centre, Melbourne, VIC, Australia.
| | - Leigh A Johnston
- Melbourne Brain Centre Imaging Unit, The University of Melbourne, Melbourne, VIC, Australia; Department of Biomedical Engineering, The University of Melbourne, Melbourne, VIC, Australia.
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Mullen M, Kobayashi N, Garwood M. Two-dimensional frequency-swept pulse with resilience to both B 1 and B 0 inhomogeneity. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2019; 299:93-100. [PMID: 30590352 PMCID: PMC6369020 DOI: 10.1016/j.jmr.2018.12.017] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2018] [Revised: 12/07/2018] [Accepted: 12/17/2018] [Indexed: 06/09/2023]
Abstract
Applications of multidimensional spatially-selective pulses are sometimes limited by their long pulse durations resulting from the need to execute a modulated gradient waveform in concert with RF transmission. Here, we introduce a method to design two-dimensional selective adiabatic pulses using a Cartesian k-space trajectory. The full pulse can be sampled using various undersampled segments to create a multidimensional pulse resilient to large off-resonances. Moreover, the pulse can be designed to be resilient to B1+ inhomogeneity. Experimental demonstrations of fully segmented and single-shot k-space sampling patterns are presented.
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Affiliation(s)
- Michael Mullen
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN, USA; School of Physics and Astronomy, University of Minnesota, Minneapolis, MN, USA
| | - Naoharu Kobayashi
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN, USA
| | - Michael Garwood
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN, USA.
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Garwood M, Uğurbil K. RF pulse methods for use with surface coils: Frequency-modulated pulses and parallel transmission. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2018; 291:84-93. [PMID: 29705035 PMCID: PMC5943143 DOI: 10.1016/j.jmr.2018.01.012] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/02/2018] [Accepted: 01/24/2018] [Indexed: 06/08/2023]
Abstract
The first use of a surface coil to obtain a 31P NMR spectrum from an intact rat by Ackerman and colleagues initiated a revolution in magnetic resonance imaging (MRI) and spectroscopy (MRS). Today, we take it for granted that one can detect signals in regions external to an RF coil; at the time, however, this concept was most unusual. In the approximately four decade long period since its introduction, this simple idea gave birth to an increasing number of innovations that has led to transformative changes in the way we collect data in an in vivo magnetic resonance experiment, particularly with MRI of humans. These innovations include spatial localization and/or encoding based on the non-uniform B1 field generated by the surface coil, leading to new spectroscopic localization methods, image acceleration, and unique RF pulses that deal with B1 inhomogeneities and even reduce power deposition. Without the surface coil, many of the major technological advances that define the extraordinary success of MRI in clinical diagnosis and in biomedical research, as exemplified by projects like the Human Connectome Project, would not have been possible.
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Affiliation(s)
- Michael Garwood
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN 55455 USA.
| | - Kamil Uğurbil
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN 55455 USA
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Jang A, Wu X, Auerbach EJ, Garwood M. Designing 3D selective adiabatic radiofrequency pulses with single and parallel transmission. Magn Reson Med 2018; 79:701-710. [PMID: 28497465 PMCID: PMC5682242 DOI: 10.1002/mrm.26720] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2016] [Revised: 03/23/2017] [Accepted: 03/24/2017] [Indexed: 11/11/2022]
Abstract
PURPOSE To introduce a method of designing single and parallel transmit (pTx) 3D adiabatic π pulses for inverting and refocusing spins that are insensitive to transmit B1 ( B1+) inhomogeneity. THEORY AND METHODS A 3D adiabatic pulse is created by replacing each piece-wise constant element (or sub-pulse) of an adiabatic full passage (AFP) by a 2D selective pulse. In this study, the parent AFP is an HS1 and each sub-pulse is a 2D pulse derived from a jinc function designed using a spiral k-trajectory. Spatial selectivity in the third direction is achieved by blipping the slab-selective gradient between sub-pulses, yielding a rectangular slab profile identical to that of the parent AFP. The slew-rate limited sub-pulse can be undersampled utilizing pTx, thus shortening the overall pulse width. Simulations and experiments demonstrate the quality of spatial selectivity and adiabaticity achievable. RESULTS The 3D adiabatic pulse inverts and refocus spins in a sharply demarcated cylindrical volume. When stepping RF amplitude, an adiabatic threshold is observed above which the flip angle remains π. Experimental results demonstrate that pTx is an effective means to significantly improve pulse performance. CONCLUSION A method of designing 3D adiabatic pulses insensitive to B1 inhomogeneity has been developed. pTx can shorten these pulses while retaining their adiabatic character. Magn Reson Med 79:701-710, 2018. © 2017 International Society for Magnetic Resonance in Medicine.
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Affiliation(s)
- Albert Jang
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minnesota, United States
- Department of Electrical and Computer Engineering, University of Minnesota, Minnesota, United States
- Department of Medicine, Cardiovascular Division, University of Minnesota, Minnesota, United States
| | - Xiaoping Wu
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minnesota, United States
| | - Edward J. Auerbach
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minnesota, United States
| | - Michael Garwood
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minnesota, United States
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Han PK, Ma C, Deng K, Hu S, Jee KW, Ying K, Chen YL, El Fakhri G. A minimum-phase Shinnar-Le Roux spectral-spatial excitation RF pulse for simultaneous water and lipid suppression in 1H-MRSI of body extremities. Magn Reson Imaging 2018; 45:18-25. [PMID: 28917812 PMCID: PMC5709164 DOI: 10.1016/j.mri.2017.09.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2017] [Revised: 09/11/2017] [Accepted: 09/12/2017] [Indexed: 02/05/2023]
Abstract
PURPOSE To develop a spectral-spatial (SPSP) excitation RF pulse for simultaneous water and lipid suppression in proton (1H) magnetic resonance spectroscopic imaging (MRSI) of body extremities. METHODS An SPSP excitation pulse is designed to excite Creatine (Cr) and Choline (Cho) metabolite signals while suppressing the overwhelming water and lipid signals. The SPSP pulse is designed using a recently proposed multidimensional Shinnar-Le Roux (SLR) RF pulse design method. A minimum-phase spectral selectivity profile is used to minimize signal loss from T2⁎ decay. RESULTS The performance of the SPSP pulse is evaluated via Bloch equation simulations and phantom experiments. The feasibility of the proposed method is demonstrated using three-dimensional, short repetition-time, free induction decay-based 1H-MRSI in the thigh muscle at 3T. CONCLUSION The proposed SPSP excitation pulse is useful for simultaneous water and lipid suppression. The proposed method enables new applications of high-resolution 1H-MRSI in body extremities.
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Affiliation(s)
- Paul Kyu Han
- Gordon Center for Medical Imaging, Department of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - Chao Ma
- Gordon Center for Medical Imaging, Department of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - Kexin Deng
- Biomedical Engineering, Tsinghua University, Beijing, People's Republic of China
| | - Shuang Hu
- Gordon Center for Medical Imaging, Department of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States; Department of Nuclear Medicine, West China Hospital, Sichuan University, Sichuan, People's Republic of China
| | - Kyung-Wook Jee
- Department of Radiation Oncology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - Kui Ying
- Engineering Physics, Tsinghua University, Beijing, People's Republic of China
| | - Yen-Lin Chen
- Gordon Center for Medical Imaging, Department of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States; Department of Radiation Oncology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - Georges El Fakhri
- Gordon Center for Medical Imaging, Department of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States.
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Liberman G, Frydman L. Reducing SAR requirements in multislice volumetric single-shot spatiotemporal MRI by two-dimensional RF pulses. Magn Reson Med 2017; 77:1959-1965. [PMID: 27203401 PMCID: PMC5184845 DOI: 10.1002/mrm.26270] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2015] [Revised: 04/17/2016] [Accepted: 04/17/2016] [Indexed: 12/15/2022]
Abstract
PURPOSE Spatiotemporal encoding (SPEN) can deliver single-scan MR images without folding complications and with increased robustness to chemical shift and susceptibility artifacts. Yet, it does so at the expense of relatively high specific absorption rates (SAR) owing to its reliance on frequency-swept pulses. This study describes SPEN implementations aimed at full three-dimensional (3D) multislice imaging, possessing reduced SAR thanks to an implementation based on new 2D radiofrequency (RF) pulses. METHODS Fully refocused spin- and stimulated-echo SPEN sequences incorporating 2D spatial/spatial swept RF pulses were implemented at 3 Tesla and compared to echo planar imaging. The use of effective 90-degree slice-selective excitation pulses enabled the scanning of 3D volumes with a low SAR. RESULTS Experiments validating the theoretical expectations were carried out on phantoms and on human volunteers, including zooming and diffusion measurements. The chosen sequences showed much smaller SARs than EPI, while delivering similar sensitivities when targeting human brain and fewer distortions when targeting human breast. CONCLUSION Two-dimensional RF pulses can exploit SPEN's advantages while fulfilling the SAR and multislice coverage demands required for clinical imaging. Magn Reson Med 77:1959-1965, 2017. © 2016 International Society for Magnetic Resonance in Medicine.
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Affiliation(s)
- Gilad Liberman
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Lucio Frydman
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot 76100, Israel
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Ma J, Wismans C, Cao Z, Klomp DWJ, Wijnen JP, Grissom WA. Tailored spiral in-out spectral-spatial water suppression pulses for magnetic resonance spectroscopic imaging. Magn Reson Med 2017; 79:31-40. [PMID: 28370494 DOI: 10.1002/mrm.26683] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2016] [Revised: 02/02/2017] [Accepted: 02/28/2017] [Indexed: 11/10/2022]
Abstract
PURPOSE To develop short water suppression sequences for 7 T magnetic resonance spectroscopic imaging, with mitigation of subject-specific transmit RF field ( B1+) inhomogeneity. METHODS Patient-tailored spiral in-out spectral-spatial saturation pulses were designed for a three-pulse WET water suppression sequence. The pulses' identical spatial subpulses were designed using patient-specific B1+ maps and a spiral in-out excitation k-space trajectory. The subpulse train was weighted by a spectral envelope that was root-flipped to minimize peak RF demand. The pulses were validated in in vivo experiments that acquired high resolution magnetic resonance spectroscopic imaging data, using a crusher coil for fast lipid suppression. Residual water signals and MR spectra were compared between the proposed tailored sequence and a conventional WET sequence. RESULTS Replacing conventional spectrally-selective pulses with tailored spiral in-out spectral-spatial pulses reduced mean water residual from 5.88 to 2.52% (57% improvement). Pulse design time was less then 0.4 s. The pulses' specific absorption rate were compatible with magnetic resonance spectroscopic imaging TRs under 300 ms, which enabled spectra of fine in plane spatial resolution (5 mm) with good quality to be measured in 7.5 min. CONCLUSION Tailored spiral in-out spectral-spatial water suppression enables efficient high resolution magnetic resonance spectroscopic imaging in the brain. Magn Reson Med 79:31-40, 2018. © 2017 International Society for Magnetic Resonance in Medicine.
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Affiliation(s)
- Jun Ma
- Vanderbilt University Institute of Imaging Science, Nashville, Tennessee, USA.,Department of Biomedical Engineering, Vanderbilt University, Nashville, Tennessee, USA
| | - Carrie Wismans
- Department of Radiology, University Medical Centre Utrecht, Utrecht, the Netherlands
| | - Zhipeng Cao
- Vanderbilt University Institute of Imaging Science, Nashville, Tennessee, USA.,Department of Biomedical Engineering, Vanderbilt University, Nashville, Tennessee, USA
| | - Dennis W J Klomp
- Department of Radiology, University Medical Centre Utrecht, Utrecht, the Netherlands
| | - Jannie P Wijnen
- Department of Radiology, University Medical Centre Utrecht, Utrecht, the Netherlands
| | - William A Grissom
- Vanderbilt University Institute of Imaging Science, Nashville, Tennessee, USA.,Department of Biomedical Engineering, Vanderbilt University, Nashville, Tennessee, USA
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12
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Farkash G, Dumez JN, Frydman L. Sculpting 3D spatial selectivity with pairs of 2D pulses: A comparison of methods. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2016; 273:9-18. [PMID: 27718460 DOI: 10.1016/j.jmr.2016.09.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2016] [Revised: 09/02/2016] [Accepted: 09/03/2016] [Indexed: 06/06/2023]
Abstract
Enhancing the specificity of the spins' excitation can improve the capabilities of magnetic resonance. Exciting voxels with tailored 3D shapes reduces partial volume effects and enhances contrast, particularly in cases where cubic voxels or other simple geometries do not provide an optimal localization. Spatial excitation profiles of arbitrary shapes can be implemented using so-called multidimensional RF pulses, which are often limited in practice to 2D implementations owing to their sensitivity to field inhomogeneities. Recent work has shown the potential of spatio-temporally encoded (SPEN) pulses towards alleviating these constraints. In particular, 2D pulses operating in a so-called hybrid scheme where the "low-bandwidth" spatial dimension is sculpted by a SPEN strategy while an orthogonal axis is shaped by regular k-space encoding, have been shown resilient to chemical shift and B0 field inhomogeneities. In this work we explore the use of pairs of 2D pulses, with one of these addressing geometries in the x-y plane and the other in the x-z dimension, to sculpt complex 3D volumes in phantoms and in vivo. To overcome limitations caused by the RF discretization demanded by these 2D pulses, a number of "unfolding" techniques yielding images from the centerband RF excitation while deleting sideband contributions - even in cases where center- and side-bands severely overlap - were developed. Thus it was possible to increase the gradient strengths applied along the low bandwidth dimensions, significantly improving the robustness of this kind of 3D sculpting pulses. Comparisons against conventional pulses designed on the basis of pure k-space trajectories, are presented.
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Affiliation(s)
- Gil Farkash
- Chemical Physics Department, Weizmann Institute of Science, 76100 Rehovot, Israel
| | - Jean-Nicolas Dumez
- Institut de Chimie des Substances Naturelles, CNRS, 91190 Gif-sur-Yvette, France
| | - Lucio Frydman
- Chemical Physics Department, Weizmann Institute of Science, 76100 Rehovot, Israel.
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13
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Feldman RE, Balchandani P. A semiadiabatic spectral-spatial spectroscopic imaging (SASSI) sequence for improved high-field MR spectroscopic imaging. Magn Reson Med 2015; 76:1071-82. [PMID: 26519948 DOI: 10.1002/mrm.26025] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2015] [Revised: 09/08/2015] [Accepted: 10/02/2015] [Indexed: 12/27/2022]
Abstract
PURPOSE MR spectroscopic imaging (MRSI) benefits from operation at 7T due to increased signal-to-noise ratio (SNR) and spectral separation. The 180° radiofrequency (RF) pulses used in the conventional MRSI sequences are particularly susceptible to the variation in the transmitted RF (B1 ) field and severe chemical shift localization errors at 7T. RF power deposition, as measured by specific absorption rate (SAR), also increases with field strength. Adiabatic 180° RF pulses may mitigate the effects of B1 variation. We designed and implemented a semiadiabatic spectral-spatial spectroscopic imaging (SASSI) pulse sequence to provide more uniform spectral data at 7T with reduced SAR. METHODS The adiabatic Shinnar-Le Roux algorithm was used to generate a high bandwidth 180° adiabatic spectral-spatial (SPSP) pulse that captured a spectral range containing the main metabolites of interest. A pair of 180° SPSP pulses was used to refocus the signal excited by a 90° SPSP pulse in order to select a 3D volume of interest in the SASSI sequence. RESULTS The SASSI pulse sequence produced spectra with more uniform brain metabolite SNR when compared with the conventional nonadiabatic MRSI sequence. CONCLUSION SASSI achieved comparable SNR to the current adiabatic alternative, semi-LASER, but with 1/3 of the SAR. Magn Reson Med 76:1071-1082, 2016. © 2015 Wiley Periodicals, Inc.
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Affiliation(s)
- Rebecca E Feldman
- Translational and Molecular Imaging Institution, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
| | - Priti Balchandani
- Translational and Molecular Imaging Institution, Icahn School of Medicine at Mount Sinai, New York, New York, USA
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14
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Guo J, Buxton RB, Wong EC. Wedge-shaped slice-selective adiabatic inversion pulse for controlling temporal width of bolus in pulsed arterial spin labeling. Magn Reson Med 2015; 76:838-47. [PMID: 26451521 DOI: 10.1002/mrm.25989] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2015] [Revised: 08/06/2015] [Accepted: 08/24/2015] [Indexed: 12/21/2022]
Abstract
PURPOSE In pulsed arterial spin labeling (PASL) methods, arterial blood is labeled by inverting a slab with uniform thickness, resulting in different temporal widths of boluses in vessels with different flow velocities. This limits the temporal resolution and signal-to-noise ratio (SNR) efficiency gains in PASL-based methods intended for high temporal resolution and SNR efficiency, such as turbo-ASL and turbo-QUASAR. THEORY AND METHODS A novel wedge-shaped (WS) adiabatic inversion pulse is developed by adding in-plane gradient pulses to a slice-selective (SS) adiabatic inversion pulse to linearly modulate the inversion thicknesses at different locations while maintaining the adiabatic properties of the original pulse. A hyperbolic secant (HS)-based WS inversion pulse was implemented. Its performance was tested in simulations and in phantom and human experiments and compared with an SS HS inversion pulse. RESULTS Compared with the SS inversion pulse, the WS inversion pulse was capable of inducing different inversion thicknesses at different locations. It could be adjusted to generate a uniform temporal width of boluses in arteries at locations with different flow velocities. CONCLUSION The WS inversion pulse can be used to control the temporal widths of labeled boluses in PASL experiments. This should benefit PASL experiments by maximizing labeling duty cycle and improving temporal resolution and SNR efficiency. Magn Reson Med 76:838-847, 2016. © 2015 Wiley Periodicals, Inc.
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Affiliation(s)
- Jia Guo
- Department of Radiology, University of California, San Diego, La Jolla, California, USA
| | - Richard B Buxton
- Department of Radiology, University of California, San Diego, La Jolla, California, USA
| | - Eric C Wong
- Department of Radiology, University of California, San Diego, La Jolla, California, USA.,Department of Psychiatry, University of California, San Diego, La Jolla, California, USA
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15
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Abstract
At ultra-high magnetic fields, such as 7T, MR imaging can noninvasively visualize the brain in unprecedented detail and through enhanced contrast mechanisms. The increased SNR and enhanced contrast available at 7T enable higher resolution anatomic and vascular imaging. Greater spectral separation improves detection and characterization of metabolites in spectroscopic imaging. Enhanced blood oxygen level-dependent contrast affords higher resolution functional MR imaging. Ultra-high-field MR imaging also facilitates imaging of nonproton nuclei such as sodium and phosphorus. These improved imaging methods may be applied to detect subtle anatomic, functional, and metabolic abnormalities associated with a wide range of neurologic disorders, including epilepsy, brain tumors, multiple sclerosis, Alzheimer disease, and psychiatric conditions. At 7T, however, physical and hardware limitations cause conventional MR imaging pulse sequences to generate artifacts, requiring specialized pulse sequences and new hardware solutions to maximize the high-field gain in signal and contrast. Practical considerations for ultra-high-field MR imaging include cost, siting, and patient experience.
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Affiliation(s)
- P Balchandani
- From the Translational and Molecular Imaging Institute (P.B.) Department of Radiology (P.B., T.P.N.), Icahn School of Medicine at Mount Sinai, New York, New York.
| | - T P Naidich
- Department of Radiology (P.B., T.P.N.), Icahn School of Medicine at Mount Sinai, New York, New York
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16
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Balchandani P, Glover G, Pauly J, Spielman D. Improved slice-selective adiabatic excitation. Magn Reson Med 2013; 71:75-82. [PMID: 23401184 DOI: 10.1002/mrm.24630] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2012] [Revised: 11/17/2012] [Accepted: 12/16/2012] [Indexed: 11/06/2022]
Abstract
PURPOSE The purpose of this work is to design an improved Slice-selective Tunable-flip AdiaBatic Low peak-power Excitation (STABLE) pulse with shorter duration and increased off-resonance immunity to make it suitable for use in a greater range of applications and at higher field strengths. An additional aim is to design a variant of this pulse to achieve B1 -insensitive, fat-suppressed excitation. METHODS The adiabatic SLR algorithm was used to generate a more uniform spectral pulse envelope for this improved radiofrequency pulse for adiabatic slice-selective excitation, called STABLE-2. Pulse parameters were adjusted to design a version of STABLE-2 with a spectral null centered on lipids. RESULTS In vivo images obtained of the human brain at 3 and 7 T demonstrate that STABLE-2 provides robust, uniform, slice-selective excitation over a range of B1 values. Phantom and in vivo knee images obtained at 3 T demonstrate the effectiveness of STABLE-2 for fat suppression. CONCLUSIONS STABLE-2 achieves B1 -insensitive slice-selective excitation while providing greater off-resonance immunity and a shorter pulse duration, when compared to the original STABLE pulse. In particular, the 9.8-ms STABLE-2 pulse provides slice selectivity over 120 Hz whereas the 21-ms STABLE pulse is limited to 80 Hz off-resonance. B1 -Insensitive fat-suppressed excitation may also be achieved by using a variant of this pulse.
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Affiliation(s)
- Priti Balchandani
- Department of Radiology, Stanford University, Stanford, California, USA
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17
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Haas M, Ullmann P, Schneider JT, Post H, Ruhm W, Hennig J, Zaitsev M. PexLoc-Parallel excitation using local encoding magnetic fields with nonlinear and nonbijective spatial profiles. Magn Reson Med 2012. [PMID: 23203228 DOI: 10.1002/mrm.24559] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
With the recent proposal of using magnetic fields that are nonlinear by design for spatial encoding, new flexibility has been introduced to MR imaging. The new degrees of freedom in shaping the spatially encoding magnetic fields (SEMs) can be used to locally adapt the imaging resolution to features of the imaged object, e.g., anatomical structures, to reduce peripheral nerve stimulation during in vivo experiments or to increase the gradient switching speed by reducing the inductance of the coils producing the SEMs and thus accelerate the imaging process. In this work, the potential of nonlinear and nonbijective SEMs for spatial encoding during transmission in multidimensional spatially selective excitation is explored. Methods for multidimensional spatially selective excitation radiofrequency pulse design based on nonlinear encoding fields are introduced, and it is shown how encoding ambiguities can be resolved using parallel transmission. In simulations and phantom experiments, the feasibility of selective excitation using nonlinear, nonbijective SEMs is demonstrated, and it is shown that the spatial resolution with which the target distribution of the transverse magnetization can be realized varies locally. Thus, the resolution of the target pattern can be increased in some regions compared with conventional linear encoding. Furthermore, experimental proof of principle of accelerated two-dimensional spatially selective excitation using nonlinear SEMs is provided in this study.
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Affiliation(s)
- M Haas
- Department of Radiology, Medical Physics, University Medical Center Freiburg, Freiburg, Germany
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18
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Sigmund EE, Suero GA, Hu C, McGorty K, Sodickson DK, Wiggins GC, Helpern JA. High-resolution human cervical spinal cord imaging at 7 T. NMR IN BIOMEDICINE 2012; 25:891-899. [PMID: 22183956 PMCID: PMC3377161 DOI: 10.1002/nbm.1809] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2011] [Revised: 09/30/2011] [Accepted: 10/03/2011] [Indexed: 05/31/2023]
Abstract
We present high-resolution anatomical imaging of the cervical spinal cord in healthy volunteers at the ultrahigh field of 7 T with a prototype four-channel radiofrequency coil array, in comparison with 3-T imaging of the same subjects. Signal-to-noise ratios at both field strengths were estimated using the rigorous Kellman method. Spinal cord cross-sectional area measurements were performed, including whole-cord measurements at both fields and gray matter segmentation at 7 T. The 7-T array coil showed reduced sagittal coverage, comparable axial coverage and the expected significantly higher signal-to-noise ratio compared with equivalent 3-T protocols. In the cervical spinal cord, the signal-to-noise ratio was found by the Kellman method to be higher by a factor of 3.5 with the 7-T coil than with standard 3-T coils. Cervical spine imaging in healthy volunteers at 7 T revealed not only detailed white/gray matter differentiation, but also structures not visualized at lower fields, such as denticulate ligaments, nerve roots and rostral-caudal blood vessels. Whole-cord cross-sectional area measurements showed good agreement at both field strengths. The measurable gray/white matter cross-sectional areas at 7 T were found to be comparable with reports from histology. These pilot data demonstrate the use of higher signal-to-noise ratios at the ultrahigh field of 7 T for significant improvement in anatomical resolution of the cervical spinal cord, allowing the visualization of structures not seen at lower field strength, particularly for axial imaging.
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Affiliation(s)
- E E Sigmund
- Department of Radiology, New York University Langone Medical Center, New York, NY, USA.
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19
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Larson PEZ, Kerr AB, Reed GD, Hurd RE, Kurhanewicz J, Pauly JM, Vigneron DB. Generating super stimulated-echoes in MRI and their application to hyperpolarized C-13 diffusion metabolic imaging. IEEE TRANSACTIONS ON MEDICAL IMAGING 2012; 31:265-275. [PMID: 22027366 PMCID: PMC3274664 DOI: 10.1109/tmi.2011.2168235] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Stimulated-echoes in MR can be used to provide high sensitivity to motion and flow, creating diffusion and perfusion weighting as well as T(1) contrast, but conventional approaches inherently suffer from a 50% signal loss. The super stimulated-echo, which uses a specialized radio-frequency (RF) pulse train, has been proposed in order to improve the signal while preserving motion and T(1) sensitivity. This paper presents a novel and straightforward method for designing the super stimulated-echo pulse train using inversion pulse design techniques. This method can also create adiabatic designs with an improved response to RF transmit field variations. The scheme was validated in phantom experiments and shown in vivo to improve signal-to-noise ratio (SNR). We have applied a super stimulated-echo to metabolic MRI with hyperpolarized (13)C-labeled molecules. For spectroscopic imaging of hyperpolarized agents, several repetition times are required but only a single stimulated-echo encoding is feasible, which can lead to unwanted motion blurring. To address this, a super stimulated-echo preparation scheme was used in which the diffusion weighting is terminated prior to the acquisition, and we observed a SNR increases of 60% in phantoms and 49% in vivo over a conventional stimulated-echo. Experiments following injection of hyperpolarized [1-(13)C] -pyruvate in murine transgenic cancer models have shown improved delineation for tumors since signals from metabolites within tumor tissues are retained while those from the vasculature are suppressed by the diffusion preparation scheme.
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Affiliation(s)
- Peder E Z Larson
- Department of Radiology and Biomedical Imaging, University of California—San Francisco, San Francisco, CA 94158, USA.
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20
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Grissom WA, Xu D, Kerr AB, Fessler JA, Noll DC. Fast large-tip-angle multidimensional and parallel RF pulse design in MRI. IEEE TRANSACTIONS ON MEDICAL IMAGING 2009; 28:1548-59. [PMID: 19447704 PMCID: PMC2763429 DOI: 10.1109/tmi.2009.2020064] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Large-tip-angle multidimensional radio-frequency (RF) pulse design is a difficult problem, due to the nonlinear response of magnetization to applied RF at large tip-angles. In parallel excitation, multidimensional RF pulse design is further complicated by the possibility for transmit field patterns to change between subjects, requiring pulses to be designed rapidly while a subject lies in the scanner. To accelerate pulse design, we introduce a fast version of the optimal control method for large-tip-angle parallel excitation. The new method is based on a novel approach to analytically linearizing the Bloch equation about a large-tip-angle RF pulse, which results in an approximate linear model for the perturbations created by adding a small-tip-angle pulse to a large-tip-angle pulse. The linear model can be evaluated rapidly using nonuniform fast Fourier transforms, and we apply it iteratively to produce a sequence of pulse updates that improve excitation accuracy. We achieve drastic reductions in design time and memory requirements compared to conventional optimal control, while producing pulses of similar accuracy. The new method can also compensate for nonidealities such as main field inhomogeneties.
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Affiliation(s)
- William A. Grissom
- W. A. Grissom and A. B. Kerr are with the Information Systems and Radiological Sciences Laboratories, Stanford University, Stanford, CA 94305 USA (, ). D. Xu is with the Global Applied Research Lab, GE Healthcare, Waukesha, Wisconsin USA (). J. A. Fessler is with the Department of Electrical Engineering and Computer Science, The University of Michigan, Ann Arbor, MI 48109-2122 USA (). D. C. Noll is with the Biomedical Engineering Department, The University of Michigan, Ann Arbor, MI 48109-2099 USA ()
| | - Dan Xu
- W. A. Grissom and A. B. Kerr are with the Information Systems and Radiological Sciences Laboratories, Stanford University, Stanford, CA 94305 USA (, ). D. Xu is with the Global Applied Research Lab, GE Healthcare, Waukesha, Wisconsin USA (). J. A. Fessler is with the Department of Electrical Engineering and Computer Science, The University of Michigan, Ann Arbor, MI 48109-2122 USA (). D. C. Noll is with the Biomedical Engineering Department, The University of Michigan, Ann Arbor, MI 48109-2099 USA ()
| | - Adam B. Kerr
- W. A. Grissom and A. B. Kerr are with the Information Systems and Radiological Sciences Laboratories, Stanford University, Stanford, CA 94305 USA (, ). D. Xu is with the Global Applied Research Lab, GE Healthcare, Waukesha, Wisconsin USA (). J. A. Fessler is with the Department of Electrical Engineering and Computer Science, The University of Michigan, Ann Arbor, MI 48109-2122 USA (). D. C. Noll is with the Biomedical Engineering Department, The University of Michigan, Ann Arbor, MI 48109-2099 USA ()
| | - Jeffrey A. Fessler
- W. A. Grissom and A. B. Kerr are with the Information Systems and Radiological Sciences Laboratories, Stanford University, Stanford, CA 94305 USA (, ). D. Xu is with the Global Applied Research Lab, GE Healthcare, Waukesha, Wisconsin USA (). J. A. Fessler is with the Department of Electrical Engineering and Computer Science, The University of Michigan, Ann Arbor, MI 48109-2122 USA (). D. C. Noll is with the Biomedical Engineering Department, The University of Michigan, Ann Arbor, MI 48109-2099 USA ()
| | - Douglas C. Noll
- W. A. Grissom and A. B. Kerr are with the Information Systems and Radiological Sciences Laboratories, Stanford University, Stanford, CA 94305 USA (, ). D. Xu is with the Global Applied Research Lab, GE Healthcare, Waukesha, Wisconsin USA (). J. A. Fessler is with the Department of Electrical Engineering and Computer Science, The University of Michigan, Ann Arbor, MI 48109-2122 USA (). D. C. Noll is with the Biomedical Engineering Department, The University of Michigan, Ann Arbor, MI 48109-2099 USA ()
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21
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Madhuranthakam AJ, Busse RF, Brittain JH, Rofsky NM, Alsop DC. B1-insensitive fast spin echo using adiabatic square wave enabling of the echo train (SWEET) excitation. Magn Reson Med 2008; 59:1386-93. [PMID: 18506787 DOI: 10.1002/mrm.21630] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Abdominal images at 3T acquired with fast spin echo (FSE) sequences often exhibit signal voids due to RF transmit field inhomogeneities. Theory suggests, however, that the repeated refocusing pulses of FSE are capable of maintaining signal even at reduced RF amplitudes if the magnetization is suitably prepared. Here we propose a modified excitation strategy for FSE that is more robust to transmit field inhomogeneities than conventional FSE. The new excitation approach replaces the standard 90 degrees excitation pulse with a discretely sampled hyperbolic secant pulse that creates a square wave longitudinal magnetization as a function of gradient and off-resonance induced phase shifts between the subsequent echoes of the FSE sequence. This pulse is followed by the conventional train of refocusing pulses except that the first few pulses increase from near zero to the desired refocusing amplitude. Simulations and in vivo results at 3T indicate preserved image quality and much greater robustness of this new sequence to nonuniform RF fields. This robustness comes at the cost of 20% reduction in signal when the RF field is uniform and increased motion sensitivity. This RF field-insensitive sequence may overcome challenges of body imaging at high field and in patients with ascites.
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22
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Balchandani P, Pauly J, Spielman D. Interleaved narrow-band PRESS sequence with adiabatic spatial-spectral refocusing pulses for 1H MRSI at 7T. Magn Reson Med 2008; 59:973-9. [PMID: 18429014 DOI: 10.1002/mrm.21539] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Proton magnetic resonance spectroscopic imaging ((1)H MRSI) is a useful technique for measuring metabolite levels in vivo, with Choline (Cho), Creatine (Cre), and N-Acetyl-Aspartate (NAA) being the most prominent MRS-detectable brain biochemicals. (1)H MRSI at very high fields, such as 7T, offers the advantages of higher SNR and improved spectral resolution. However, major technical challenges associated with high-field systems, such as increased B(1) and B(0) inhomogeneity as well as chemical shift localization (CSL) error, degrade the performance of conventional (1)H MRSI sequences. To address these problems, we have developed a Position Resolved Spectroscopy (PRESS) sequence with adiabatic spatial-spectral (SPSP) refocusing pulses, to acquire multiple narrow spectral bands in an interleaved fashion. The adiabatic SPSP pulses provide magnetization profiles that are largely invariant over the 40% B(1) variation measured across the brain at 7T. Additionally, there is negligible CSL error since the transmit frequency is separately adjusted for each spectral band. in vivo (1)H MRSI data were obtained from the brain of a normal volunteer using a standard PRESS sequence and the interleaved narrow-band PRESS sequence with adiabatic refocusing pulses. In comparison with conventional PRESS, this new approach generated high-quality spectra from an appreciably larger region of interest and achieved higher overall SNR.
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Affiliation(s)
- Priti Balchandani
- Department of Electrical Engineering, Stanford University, Stanford, CA 94305, USA.
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23
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Balchandani P, Spielman D. Fat suppression for 1H MRSI at 7T using spectrally selective adiabatic inversion recovery. Magn Reson Med 2008; 59:980-8. [PMID: 18429027 DOI: 10.1002/mrm.21537] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Proton magnetic resonance spectroscopic imaging ((1)H MRSI) at 7T offers many advantages, including increased SNR and spectral resolution. However, technical difficulties associated with operating at high fields, such as increased B(1) and B(0) inhomogeneity, severe chemical shift localization error, and converging T(1) values, make the suppression of the broad lipid peaks which can obscure targeted metabolite signals, particularly challenging. Conventional short tau inversion recovery can successfully suppress fat without restricting the selected volume, but only with significant metabolite signal loss. In this work, we have designed two new pulses for frequency-selective inversion recovery that achieve B(1)-insensitive fat suppression without degrading the signal from the major metabolites of interest. The first is a spectrally selective adiabatic pulse to be used in a volumetric (1)H MRSI sequence and the second is a spatial-spectral adiabatic pulse geared toward multi-slice (1)H MRSI. Partial interior volume selection may be used in addition to the pulses, to exclude areas with severe B(0) inhomogeneity. Some differences in the spectral profile as well as degree of suppression make each pulse valuable for different applications. 7T phantom and in vivo data show that both pulses significantly suppress fat, while leaving most of the metabolite signal intact.
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Affiliation(s)
- Priti Balchandani
- Department of Electrical Engineering, Stanford University, Stanford, CA 94305, USA.
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24
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Abstract
Over the past two decades, proton magnetic resonance spectroscopy (proton MRS) of the brain has made the transition from research tool to a clinically useful modality. In this review, we first describe the localization methods currently used in MRS studies of the brain and discuss the technical and practical factors that determine the applicability of the methods to particular clinical studies. We also describe each of the resonances detected by localized solvent-suppressed proton MRS of the brain and discuss the metabolic and biochemical information that can be derived from an analysis of their concentrations. We discuss spectral quantitation and summarize the reproducibility of both single-voxel and multivoxel methods at 1.5 and 3-4 T. We have selected three clinical neurologic applications in which there has been a consensus as to the diagnostic value of MRS and summarize the information relevant to clinical applications. Finally, we speculate about some of the potential technical developments, either in progress or in the future, that may lead to improvements in the performance of proton MRS.
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Affiliation(s)
- Yael Rosen
- Department of Radiology, Beth Israel Deaconess Medical Center, Harvard Medical School, 02215 Boston, Massachusetts
| | - Robert E. Lenkinski
- Department of Radiology, Beth Israel Deaconess Medical Center, Harvard Medical School, 02215 Boston, Massachusetts
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25
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Ibrahim TS. Ultrahigh-field MRI whole-slice and localized RF field excitations using the same RF transmit array. IEEE TRANSACTIONS ON MEDICAL IMAGING 2006; 25:1341-7. [PMID: 17024837 DOI: 10.1109/tmi.2006.880666] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
In this paper, a multiport driving mechanism is numerically implemented at ultra high-field (UHF) magnetic resonance imaging (MRI) to provide 1) homogenous whole-slice (axial, sagittal, or coronal) and 2) highly localized radio frequency (RF) field excitation within the same slices, all with the same RF transmit array (here chosen to be a standard transverse electromagnetic (TEM) resonator/coil). The method is numerically tested using a full-wave model of a TEM coil loaded with a high-resolution/18-tissue/anatomically detailed human head mesh. The proposed approach is solely based on electromagnetic and phased array antenna theories. The results demonstrate that both homogenous whole-slice as well as localized RF excitation can be achieved within any slice of the head at 7 T (298 MHz for proton imaging).
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Affiliation(s)
- Tamer S Ibrahim
- Department of Radiology, University of Pittsburgh, Pittsburgh, PA 15213, USA.
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Hargreaves BA, Cunningham CH, Nishimura DG, Conolly SM. Variable-rate selective excitation for rapid MRI sequences. Magn Reson Med 2004; 52:590-7. [PMID: 15334579 DOI: 10.1002/mrm.20168] [Citation(s) in RCA: 136] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Balanced steady-state free precession (SSFP) imaging sequences require short repetition times (TRs) to avoid off-resonance artifacts. The use of slab-selective excitations is common, as this can improve imaging speed by limiting the field of view (FOV). However, the necessarily short-duration excitations have poor slab profiles. This results in unusable slices at the slab edge due to significant flip-angle variations or aliasing in the slab direction. Variable-rate selective excitation (VERSE) is a technique by which a time-varying gradient waveform is combined with a modified RF waveform to provide the same excitation profile with different RF power and duration characteristics. With the use of VERSE, it is possible to design short-duration pulses with dramatically improved slab profiles. These pulses achieve high flip angles with only minor off-resonance sensitivity, while meeting SAR limits at 1.5 T. The improved slab profiles will enable more rapid 3D imaging of limited volumes, with more consistent image contrast across the excited slab.
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Affiliation(s)
- Brian A Hargreaves
- Magnetic Resonance Systems Research Laboratory, Department of Electrical Engineering, Stanford University, CA, USA.
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Yang GZ, Gatehouse PD, Keegan J, Mohiaddin RH, Firmin DN. Three-dimensional coronary MR angiography using zonal echo planar imaging. Magn Reson Med 1998; 39:833-42. [PMID: 9581615 DOI: 10.1002/mrm.1910390521] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Using an adapted two-dimensional spatially selective RF excitation scheme, a novel yet practical three-dimensional (3D) zonal echo-planar imaging technique for MR coronary angiography has been developed. The robustness of the technique compared with the two-dimensional (2D) segmented fast low angle shot (FLASH) method was evaluated using the right coronary artery images of 16 asymptomatic volunteers with a 0.5-T mobile scanner. Each 3D acquisition required multiple breath-holds, and real-time navigator echoes were used to ensure consistent breath-holding. Advantages of the technique include an improved signal-to-noise ratio, clearer depiction of tortuous coronary vessels due to decreased partial volume effects, and reduced motion blurring by the use of a short echo-planar readout.
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Affiliation(s)
- G Z Yang
- Magnetic Resonance Unit, Royal Brompton Hospital, London, United Kingdom
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Abstract
The echo-planar k-space trajectory can be used as the basis for any two-dimensional selective pulse. The main application is spectral-spatial pulses, which must be based on the echo-planar trajectory. In this paper we show how echo-planar spin-echo (EPSE) pulses may be designed.
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Affiliation(s)
- J Pauly
- Department of Electrical Engineering, Stanford University, California 94305
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