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Guo Z, Zhang X, Zhou L, Huang Q, Kang Q, Bai L. Nonglycosidic C-O bond formation catalyzed by a bifunctional pseudoglycosyltransferase ValL. Synth Syst Biotechnol 2025; 10:846-857. [PMID: 40308293 PMCID: PMC12041759 DOI: 10.1016/j.synbio.2025.04.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2025] [Revised: 04/10/2025] [Accepted: 04/15/2025] [Indexed: 05/02/2025] Open
Abstract
The C7N antibiotic validamycin A is an antifungal agent widely used as a crop protectant. It comprises a validoxylamine A unit linked to a glucose moiety, which is formed through a nonglycosidic C - N bond connecting a valienol moiety and a validamine moiety, a reaction catalyzed by the pseudoglycosyltransferase ValL. In this study, we analyzed the chemical composition of validamycins in Streptomyces hygroscopicus var. jinggangensis TL01. A series of novel oxygen-bridged analogues, namely, validenomycin, validomycin, and 1,1'-bis-valienol, were identified in the culture supernatants, and their chemical structures were elucidated using a combination of one- and two-dimensional nuclear magnetic resonance and mass spectrometry. Gene disruption and complementation experiments revealed that valL is essential for the biosynthesis of these new oxygen-bridged analogues of validamycins. Biochemical assays further demonstrated that ValL catalyzed the C-O bond formation between GDP-valienol and valienol-7-phosphate, producing 1,1'-bis-valienol-7-phosphate, which was subsequently dephosphorylated by ValO and glycosylated by ValG to yield validenomycin. Collectively, our findings revealed the unique ability of ValL to catalyze nonglycosidic C-O coupling, potentially enabling the generation of various chemical scaffolds for C7N family antibiotics.
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Affiliation(s)
- Ziyue Guo
- State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Xin Zhang
- State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Lin Zhou
- State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Qungang Huang
- State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Qianjin Kang
- State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China
- College of Life Science and Technology, Tarim University, Alar, 843300, Xinjiang, China
| | - Linquan Bai
- State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China
- College of Life Science and Technology, Tarim University, Alar, 843300, Xinjiang, China
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2
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Jeong HC, Lee HJ, Maruoka K. Chemoselective Cleavage and Transamidation of Tertiary p-Methoxybenzyl Amides under Metal-Free Photoredox Catalysis. Org Lett 2024; 26:9513-9518. [PMID: 39431889 DOI: 10.1021/acs.orglett.4c03485] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2024]
Abstract
A metal-free and mild cleavage of tertiary p-methoxybenzyl amides (PMB tert-amide) under photoredox conditions is developed using Mes-Acr-Ph+BF4- and Selectfluor to activate the electron-rich benzylic C-H bond of the PMB moiety. The resulting acyl fluoride intermediate is versatile and facilitates a one-pot transamidation of the PMB tert-amide. The value of this protocol is highlighted by performing the chemoselective activation of the PMB tert-amide in bifunctional molecules containing more reactive functionalities than the amide.
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Affiliation(s)
- Hee-Chan Jeong
- School of Advanced Science and Technology, Kunsan National University, Gunsan 54150, Republic of Korea
| | - Hyo-Jun Lee
- School of Advanced Science and Technology, Kunsan National University, Gunsan 54150, Republic of Korea
| | - Keiji Maruoka
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo, Kyoto 606-8501, Japan
- School of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou 510006, China
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3
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Wang Y, Guo M, Xu X. Nanoproteases: Alternatives to Natural Protease for Biotechnological Applications. Chemistry 2024; 30:e202401178. [PMID: 38705854 DOI: 10.1002/chem.202401178] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2024] [Revised: 04/26/2024] [Accepted: 04/29/2024] [Indexed: 05/07/2024]
Abstract
Some nanomaterials with intrinsic protease-like activity have the advantages of good stability, biosafety, low price, large-scale preparation and unique property of nanomaterials, which are promising alternatives for natural proteases in various applications. An especial term, "nanoprotease", has been coined to stress the intrinsic proteolytic property of these nanomaterials. As a new generation of artificial proteases, they have become a burgeoning field, attracting many researchers to design and synthesize high performance nanoproteases. In this review, we summarize recent progress on all types of nanoproteases with regard of their activity, mechanism and application and introduce a new and effective strategy for engineering high-performance nanoproteases. In addition, we discuss the challenges and opportunities of nanoprotease research in the future.
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Affiliation(s)
- Yaru Wang
- Department of Chemistry, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, P. R. China
| | - Mingxiu Guo
- Department of Chemistry, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, P. R. China
| | - Xiaolong Xu
- Department of Chemistry, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, P. R. China
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Jia J, Kato T, Maruoka K. p-Methoxybenzyl-Radical-Promoted Chemoselective Protection of sec-Alkylamides. J Org Chem 2023; 88:2575-2582. [PMID: 36731133 DOI: 10.1021/acs.joc.2c02582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
The hitherto difficult site-selective p-methoxybenzylation of secondary amides using p-methoxybenzylated alkylsilyl peroxides as a novel p-methoxybenzylation agent under copper catalysis is reported. The reaction proceeds under mild reaction conditions in a highly chemoselective manner. This approach was successfully applied to the site-selective p-methoxybenzylation of peptides.
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Affiliation(s)
- JingWen Jia
- Laboratory of Organocatalytic Chemistry, Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo, Kyoto 606-8501, Japan
| | - Terumasa Kato
- School of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou 510006, China
| | - Keiji Maruoka
- Laboratory of Organocatalytic Chemistry, Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo, Kyoto 606-8501, Japan.,School of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou 510006, China
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Wu T, Zhan W, Jia X, Li H, Sui G, Yang X. Solvent-free rapid degradation of epoxy composites and recycling application of high performance carbon fibers through the synergic catalysis effect of molten salts and titanium dioxide. Polym Degrad Stab 2022. [DOI: 10.1016/j.polymdegradstab.2022.109849] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Wang T, Wang Y, Xu K, Zhang Y, Guo J, Liu L. Transition‐Metal‐Free DMAP‐Mediated Aromatic Esterification of Amides with Organoboronic Acids. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100478] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Tao Wang
- School of Chemistry and Chemical Engineering Henan Engineering Laboratory of Green Synthesis for Pharmaceuticals Shangqiu Normal University Shangqiu Henan 476000 China
- School of Chemistry and Chemical Engineering Henan Key Laboratory of Biomolecular Recognition and Sensing Shangqiu Normal University Shangqiu Henan 476000 China
| | - Yanqing Wang
- School of Chemistry and Chemical Engineering Henan Engineering Laboratory of Green Synthesis for Pharmaceuticals Shangqiu Normal University Shangqiu Henan 476000 China
| | - Kai Xu
- School of Chemistry and Chemical Engineering Henan Engineering Laboratory of Green Synthesis for Pharmaceuticals Shangqiu Normal University Shangqiu Henan 476000 China
- School of Chemistry and Chemical Engineering Henan Key Laboratory of Biomolecular Recognition and Sensing Shangqiu Normal University Shangqiu Henan 476000 China
| | - Yuheng Zhang
- School of Chemistry and Chemical Engineering Henan Engineering Laboratory of Green Synthesis for Pharmaceuticals Shangqiu Normal University Shangqiu Henan 476000 China
- School of Chemistry and Chemical Engineering Henan Key Laboratory of Biomolecular Recognition and Sensing Shangqiu Normal University Shangqiu Henan 476000 China
| | - Jiarui Guo
- School of Chemistry and Chemical Engineering Henan Engineering Laboratory of Green Synthesis for Pharmaceuticals Shangqiu Normal University Shangqiu Henan 476000 China
- School of Chemistry and Chemical Engineering Henan Key Laboratory of Biomolecular Recognition and Sensing Shangqiu Normal University Shangqiu Henan 476000 China
| | - Lantao Liu
- School of Chemistry and Chemical Engineering Henan Engineering Laboratory of Green Synthesis for Pharmaceuticals Shangqiu Normal University Shangqiu Henan 476000 China
- School of Chemistry and Chemical Engineering Henan Key Laboratory of Biomolecular Recognition and Sensing Shangqiu Normal University Shangqiu Henan 476000 China
- College of Chemistry Zhengzhou University Zhengzhou Henan 450001 China
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Siddiki SMAH, Rashed MN, Touchy AS, Jamil MAR, Jing Y, Toyao T, Maeno Z, Shimizu KI. Hydrolysis of amides to carboxylic acids catalyzed by Nb 2O 5. Catal Sci Technol 2021. [DOI: 10.1039/d0cy02230f] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
An efficient heterogeneous Nb2O5 catalytic system has been developed for industrially important and challenging amide hydrolysis reaction to carboxylic acid through cleavage of resonance stabilized amidic C–N bond.
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Affiliation(s)
| | | | | | - Md. A. R. Jamil
- Institute for Catalysis
- Hokkaido University
- Sapporo 001-0021
- Japan
| | - Yuan Jing
- Institute for Catalysis
- Hokkaido University
- Sapporo 001-0021
- Japan
| | - Takashi Toyao
- Institute for Catalysis
- Hokkaido University
- Sapporo 001-0021
- Japan
- Elements Strategy Initiative for Catalysts and Batteries
| | - Zen Maeno
- Institute for Catalysis
- Hokkaido University
- Sapporo 001-0021
- Japan
| | - Ken-ichi Shimizu
- Institute for Catalysis
- Hokkaido University
- Sapporo 001-0021
- Japan
- Elements Strategy Initiative for Catalysts and Batteries
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8
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Huang C, Li J, Wang J, Zheng Q, Li Z, Tu T. Hydrogen-bond-assisted transition-metal-free catalytic transformation of amides to esters. Sci China Chem 2020. [DOI: 10.1007/s11426-020-9883-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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Wang Z, Matsumoto A, Maruoka K. Efficient cleavage of tertiary amide bonds via radical-polar crossover using a copper(ii) bromide/Selectfluor hybrid system. Chem Sci 2020; 11:12323-12328. [PMID: 34094440 PMCID: PMC8163011 DOI: 10.1039/d0sc05137c] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Accepted: 10/13/2020] [Indexed: 02/06/2023] Open
Abstract
A novel approach for the efficient cleavage of the amide bonds in tertiary amides is reported. Based on the selective radical abstraction of a benzylic hydrogen atom by a CuBr2/Selectfluor hybrid system followed by a selective cleavage of an N-C bond, an acyl fluoride intermediate is formed. This intermediate may then be derivatized in a one-pot fashion. The reaction proceeds under mild conditions and exhibits a broad substrate scope with respect to the tertiary amide moiety as well as to nitrogen, oxygen, and carbon nucleophiles for the subsequent derivatization. Mechanistic studies suggest that the present reaction proceeds via a radical-polar crossover process that involves benzylic carbon radicals generated by the selective radical abstraction of a benzylic hydrogen atom by the CuBr2/Selectfluor hybrid system. Furthermore, a synthetic application of this method for the selective cleavage of peptides is described.
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Affiliation(s)
- Zhe Wang
- Graduate School of Pharmaceutical Sciences, Kyoto University Sakyo Kyoto 606-8501 Japan
| | - Akira Matsumoto
- Graduate School of Pharmaceutical Sciences, Kyoto University Sakyo Kyoto 606-8501 Japan
| | - Keiji Maruoka
- Graduate School of Pharmaceutical Sciences, Kyoto University Sakyo Kyoto 606-8501 Japan
- School of Chemical Engineering and Light Industry, Guangdong University of Technology Guangzhou 510006 China
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Hirai T, Kato D, Mai BK, Katayama S, Akiyama S, Nagae H, Himo F, Mashima K. Esterification of Tertiary Amides: Remarkable Additive Effects of Potassium Alkoxides for Generating Hetero Manganese-Potassium Dinuclear Active Species. Chemistry 2020; 26:10735-10742. [PMID: 32346933 PMCID: PMC7496701 DOI: 10.1002/chem.202001447] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2020] [Indexed: 02/03/2023]
Abstract
A catalyst system of mononuclear manganese precursor 3 combined with potassium alkoxide served as a superior catalyst compared with our previously reported manganese homodinuclear catalyst 2 a for esterification of not only tertiary aryl amides, but also tertiary aliphatic amides. On the basis of stoichiometric reactions of 3 and potassium alkoxide salt, kinetic studies, and density functional theory (DFT) calculations, we clarified a plausible reaction mechanism in which in situ generated manganese-potassium heterodinuclear species cooperatively activates the carbonyl moiety of the amide and the OH moiety of the alcohols. We also revealed details of the reaction mechanism of our previous manganese homodinuclear system 2 a, and we found that the activation free energy (ΔG≠ ) for the manganese-potassium heterodinuclear complex catalyzed esterification of amides is lower than that for the manganese homodinuclear system, which was consistent with the experimental results. We further applied our catalyst system to deprotect the acetyl moiety of primary and secondary amines.
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Affiliation(s)
- Takahiro Hirai
- Department of ChemistryGraduate School of Engineering ScienceOsaka UniversityToyonakaOsaka560-8531Japan
| | - Daiki Kato
- Department of ChemistryGraduate School of Engineering ScienceOsaka UniversityToyonakaOsaka560-8531Japan
| | - Binh Khanh Mai
- Department of Organic ChemistryArrhenius LaboratoryStockholm UniversitySE-106 91StockholmSweden
| | - Shoichiro Katayama
- Department of ChemistryGraduate School of Engineering ScienceOsaka UniversityToyonakaOsaka560-8531Japan
| | - Shoko Akiyama
- Department of ChemistryGraduate School of Engineering ScienceOsaka UniversityToyonakaOsaka560-8531Japan
| | - Haruki Nagae
- Department of ChemistryGraduate School of Engineering ScienceOsaka UniversityToyonakaOsaka560-8531Japan
| | - Fahmi Himo
- Department of Organic ChemistryArrhenius LaboratoryStockholm UniversitySE-106 91StockholmSweden
| | - Kazushi Mashima
- Department of ChemistryGraduate School of Engineering ScienceOsaka UniversityToyonakaOsaka560-8531Japan
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