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Xiong R, Liu S, Considine MJ, Siddique KHM, Lam HM, Chen Y. Root system architecture, physiological and transcriptional traits of soybean (Glycine max L.) in response to water deficit: A review. PHYSIOLOGIA PLANTARUM 2021; 172:405-418. [PMID: 32880966 DOI: 10.1111/ppl.13201] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Revised: 08/28/2020] [Accepted: 09/01/2020] [Indexed: 05/24/2023]
Abstract
Drought stress is the main limiting factor for global soybean growth and production. Genetic improvement for water and nutrient uptake efficiency is critical to advance tolerance and enable more sustainable and resilient production, underpinning yield growth. The identification of quantitative traits and genes related to water and nutrient uptake will enhance our understanding of the mechanisms of drought tolerance in soybean. This review summarizes drought stress in the context of the physiological traits that enable effective acclimation, with a particular focus on roots. Genes controlling root system architecture play an important role in water and nutrient availability, and therefore important targets for breeding strategies to improve drought tolerance. This review highlights the candidate genes that have been identified as regulators of important root traits and responses to water stress. Progress in our understanding of the function of particular genes, including GmACX1, GmMS and GmPEPCK are discussed in the context of developing a system-based platform for genetic improvement of drought tolerance in soybean.
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Affiliation(s)
- Rentao Xiong
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Northwest A&F University, and Chinese Academy of Sciences, Yangling, Shaanxi, China
| | - Shuo Liu
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Northwest A&F University, and Chinese Academy of Sciences, Yangling, Shaanxi, China
| | - Michael J Considine
- School of Molecular Sciences, The University of Western Australia, LB 5005, Perth, Western Australia, 6001, Australia
| | - Kadambot H M Siddique
- The UWA Institute of Agriculture, and UWA School of Agriculture and Environment, The University of Western Australia, LB 5005, Perth, Western Australia, 6001, Australia
| | - Hon-Ming Lam
- Center for Soybean Research of the State Key Laboratory of Agrobiotechnology, and School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
| | - Yinglong Chen
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Northwest A&F University, and Chinese Academy of Sciences, Yangling, Shaanxi, China
- The UWA Institute of Agriculture, and UWA School of Agriculture and Environment, The University of Western Australia, LB 5005, Perth, Western Australia, 6001, Australia
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Balázs HE, Schmid CAO, Cruzeiro C, Podar D, Szatmari PM, Buegger F, Hufnagel G, Radl V, Schröder P. Post-reclamation microbial diversity and functions in hexachlorocyclohexane (HCH) contaminated soil in relation to spontaneous HCH tolerant vegetation. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 767:144653. [PMID: 33550064 DOI: 10.1016/j.scitotenv.2020.144653] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2020] [Revised: 11/24/2020] [Accepted: 12/16/2020] [Indexed: 06/12/2023]
Abstract
The toxicity, volatility and persistence of the obsolete organochlorine pesticide hexachlorocyclohexane (HCH), makes reclamation of contaminated areas a priority for the health and welfare of neighboring human communities. Microbial diversity and functions and their relation to spontaneous vegetation in post-excavation situations, are essential indicators to consider in bioaugmentation or microbe-assisted phytoremediation strategies at field scale. Our study aimed to evaluate the effects of long-term HCH contamination on soil and plant-associated microbial communities, and whether contaminated soil has the potential to act as a bacterial inoculum in post-excavation bioremediation strategies. To scrutinize the role of vegetation, the potential nitrogen fixation of free-living and symbiotic diazotrophs of the legume Lotus tenuis was assessed as a measure of nutrient cycling functions in soil under HCH contamination. Potential nitrogen fixation was generally not affected by HCH, with the exception of lower nifH gene counts in excavated contaminated rhizospheres, most probably a short-term HCH effect on early bacterial succession in this compartment. HCH shaped microbial communities in long-term contaminated bulk soil, where we identified possible HCH tolerants such as Sphingomonas and Altererythrobacter. In L. tenuis rhizosphere, microbial community composition was additionally influenced by plant growth stage. Sphingobium and Massilia were the bacterial genera characteristic for HCH contaminated rhizospheres. Long-term HCH contamination negatively affected L. tenuis growth and development. However, root-associated bacterial community composition was driven solely by plant age, with negligible HCH effect. Results showed that L. tenuis acquired possible HCH tolerant bacteria such as the Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium clade, Sphingomonas, Massilia or Pantoea which could simultaneously offer plant growth promoting (PGP) benefits for the host. Finally, we identified an inoculum with possibly HCH tolerant, PGP bacteria transferred from the contaminated bulk soil to L. tenuis roots through the rhizosphere compartment, consisting of Mesorhizobium loti, Neorhizobium galegae, Novosphingobium lindaniclasticum, Pantoea agglomerans and Lysobacter bugurensis.
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Affiliation(s)
- Helga E Balázs
- Helmholtz Zentrum München GmbH, Research Unit for Comparative Microbiome Analysis, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany; Babeş-Bolyai University, Department of Taxonomy and Ecology, 1 Kogălniceanu St., 400084 Cluj-Napoca, Romania
| | - Christoph A O Schmid
- Helmholtz Zentrum München GmbH, Research Unit for Comparative Microbiome Analysis, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany
| | - Catarina Cruzeiro
- Helmholtz Zentrum München GmbH, Research Unit for Comparative Microbiome Analysis, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany.
| | - Dorina Podar
- Babeş-Bolyai University, Department of Molecular Biology and Biotechnology, 1 Kogălniceanu St., 400084 Cluj-Napoca, Romania.
| | - Paul-Marian Szatmari
- Babeş-Bolyai University, Department of Taxonomy and Ecology, 1 Kogălniceanu St., 400084 Cluj-Napoca, Romania; Biological Research Center, Botanical Garden "Vasile Fati", 16 Wesselényi Miklós St., 455200 Jibou, Romania
| | - Franz Buegger
- Helmholtz Zentrum München GmbH, Research Unit for Biochemical Plant Pathology, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany.
| | - Gudrun Hufnagel
- Helmholtz Zentrum München GmbH, Research Unit for Comparative Microbiome Analysis, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany.
| | - Viviane Radl
- Helmholtz Zentrum München GmbH, Research Unit for Comparative Microbiome Analysis, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany.
| | - Peter Schröder
- Helmholtz Zentrum München GmbH, Research Unit for Comparative Microbiome Analysis, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany.
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The Fungicide Tetramethylthiuram Disulfide Negatively Affects Plant Cell Walls, Infection Thread Walls, and Symbiosomes in Pea ( Pisum sativum L.) Symbiotic Nodules. PLANTS 2020; 9:plants9111488. [PMID: 33158267 PMCID: PMC7694270 DOI: 10.3390/plants9111488] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/29/2020] [Revised: 10/21/2020] [Accepted: 11/03/2020] [Indexed: 12/26/2022]
Abstract
In Russia, tetramethylthiuram disulfide (TMTD) is a fungicide widely used in the cultivation of legumes, including the pea (Pisum sativum). Application of TMTD can negatively affect nodulation; nevertheless, its effect on the histological and ultrastructural organization of nodules has not previously been investigated. In this study, the effect of TMTD at three concentrations (0.4, 4, and 8 g/kg) on nodule development in three pea genotypes (laboratory lines Sprint-2 and SGE, and cultivar 'Finale') was examined. In SGE, TMTD at 0.4 g/kg reduced the nodule number and shoot and root fresh weights. Treatment with TMTD at 8 g/kg changed the nodule color from pink to green, indicative of nodule senescence. Light and transmission electron microscopy analyses revealed negative effects of TMTD on nodule structure in each genotype. 'Finale' was the most sensitive cultivar to TMTD and Sprint-2 was the most tolerant. The negative effects of TMTD on nodules included the appearance of a senescence zone, starch accumulation, swelling of cell walls accompanied by a loss of electron density, thickening of the infection thread walls, symbiosome fusion, and bacteroid degradation. These results demonstrate how TMTD adversely affects nodules in the pea and will be useful for developing strategies to optimize fungicide use on legume crops.
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Rathjen JR, Ryder MH, Riley IT, Lai TV, Denton MD. Impact of seed-applied pesticides on rhizobial survival and legume nodulation. J Appl Microbiol 2020; 129:389-399. [PMID: 32011051 DOI: 10.1111/jam.14602] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2019] [Revised: 01/29/2020] [Accepted: 01/30/2020] [Indexed: 11/29/2022]
Abstract
AIMS Compatibility of seed-applied pesticides and rhizobial inoculants is an important consideration for farmers when sowing legumes. Some of the seed-applied pesticides may influence rhizobial growth and nodulation, but there is currently little available information on the potential inhibitory effects. Therefore, common seed fungicidal and insecticidal treatments were assessed to determine adverse impacts on rhizobial inoculants both in vitro, on treated seed, and in the field. METHODS AND RESULTS Initially, the in vitro toxicity of the seed-applied fungicides Thiram 600, P-Pickel T (PPT), their active ingredients (thiram and thiabendazole) and the insecticide Gaucho to rhizobia was measured with filter discs containing varying concentrations of the pesticides. Pea and chickpea seed was then coated with the same pesticides and inoculated with rhizobia in different inoculant substrates to determine bacterial survival and nodulation. Finally, a field trial using the fungicide PPT and commercial inoculants was conducted. Some seed fungicide treatments were found to be inhibitory to rhizobia and reduce nodulation under monoxenic conditions and in the field. SIGNIFICANCE AND IMPACT OF THE STUDY These data provide more detailed information on the compatibility of specific rhizobial inoculants with common seed-applied pesticides. This research will provide information on the compatibility of rhizobia and seed-applied pesticides, and assist farmers to select sowing practices which reduce the risk of crop nodulation failures.
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Affiliation(s)
- J R Rathjen
- School of Agriculture Food and Wine, The University of Adelaide, Glen Osmond, SA, Australia
| | - M H Ryder
- School of Agriculture Food and Wine, The University of Adelaide, Glen Osmond, SA, Australia
| | - I T Riley
- School of Agriculture Food and Wine, The University of Adelaide, Glen Osmond, SA, Australia.,Faculty of Agricultural Sciences and Technologies, Niğde Ömer Halisdemir University, Niğde, Turkey
| | - T V Lai
- School of Agriculture Food and Wine, The University of Adelaide, Glen Osmond, SA, Australia
| | - M D Denton
- School of Agriculture Food and Wine, The University of Adelaide, Glen Osmond, SA, Australia
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Goring CAI, Laskowski DA. The Effects of Pesticides on Nitrogen Transformations in Soils. NITROGEN IN AGRICULTURAL SOILS 2015. [DOI: 10.2134/agronmonogr22.c18] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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Ghosh S, Sadhukhan P, Ghosh D, Mandal A, Chaudhuri J, Mandal A. Studies on the effect of mercury and organomercurial on the growth and nitrogen fixation by mercury-resistantAzotobacterstrains. ACTA ACUST UNITED AC 2008. [DOI: 10.1111/j.1365-2672.1996.tb03226.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Revellin C, De Canson B, Catroux G. Effect of a Mixture of Chlorpyrifos and Lindane on the Symbiosis ofBradyrhizobium japonicumand Soybean (Glycine max.(L.) Merril). ACTA ACUST UNITED AC 2006. [DOI: 10.1002/ps.2780360111] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Tesfai K, Mallik MA. Effect of fungicide application on soybean-rhizobia symbiosis and isolation of fungicide-resistant strains of Rhizobia japonicum. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 1986; 36:819-26. [PMID: 3719119 DOI: 10.1007/bf01623589] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2023]
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Malik MA, Tesfai K. Compatibility of Rhizobium japonicum with commercial pesticides in vitro. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 1983; 31:432-437. [PMID: 6640140 DOI: 10.1007/bf01622274] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
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Lal R. Accumulation, metabolism, and effects of organophosphorus insecticides on microorganisms. ADVANCES IN APPLIED MICROBIOLOGY 1982; 28:149-200. [PMID: 6765017 DOI: 10.1016/s0065-2164(08)70235-1] [Citation(s) in RCA: 55] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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Tu CM. Effect of fungicides on growth of Rhizobium japonicum in vitro. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 1980; 25:364-368. [PMID: 7426785 DOI: 10.1007/bf01985539] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
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