1
|
Xu Y, Ghori N, Hussain S, Xu X, Su Z, Zhang D, Zhao L, Liu X, Chen MS, Bai G. Evaluating a worldwide wheat collection for resistance to Hessian fly biotype 'Great Plains'. FRONTIERS IN PLANT SCIENCE 2024; 15:1402218. [PMID: 38845847 PMCID: PMC11155297 DOI: 10.3389/fpls.2024.1402218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Accepted: 05/03/2024] [Indexed: 06/09/2024]
Abstract
Hessian fly (HF), Mayetiola destructor, is a major insect pest that causes severe losses in grain yield and quality of wheat (Triticum aestivum). Growing resistant cultivars is the most cost-effective approach to minimize wheat yield losses caused by HF. In this study, 2,496 wheat accessions were screened for resistance to the HF biotype 'Great Plains' (GP) in the greenhouse experiments. To purify seeds from heterogeneous resistant accessions, we recovered single resistant plants from 331 accessions that had at least one resistant plant after HF infestation of a global collection of 1,595 accessions and confirmed 27 accessions with high resistance (HR), and 91 accessions with moderate resistance (MR) to the GP biotype using purified seeds. Screening of 203 U.S. winter wheat accessions in three experiments identified 63 HR and 28 MR accessions; and screening of three additional Asian panels identified 4 HR and 25 MR accessions. Together, this study identified 96 HR accessions and 144 MR accessions. Analysis of the geographic distribution of these HR and MR accessions revealed that these countries with HF as a major wheat pest usually showed higher frequencies of resistant accessions, with the highest frequency of HR (81.3%) and MR (30.6%) accessions identified from the U.S. In addition, phenotyping of 39 wheat accessions that carry known HF resistance genes showed that all the accessions except H1H2 remain effective against GP biotype. Some of these newly identified resistant accessions may contain new HF resistance genes and can be valuable sources for developing HF resistant wheat cultivars.
Collapse
Affiliation(s)
- Yunfeng Xu
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
- Agricultural Genomics Institute at Shenzhen (AGIS), Chinese Academy of Agricultural Sciences (CAAS), Shenzhen, China
| | - Nida Ghori
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
| | - Shabbir Hussain
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
| | - Xiaoting Xu
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
| | - Zhenqi Su
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
| | - Dadong Zhang
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
| | - Lanfei Zhao
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
| | - Xuming Liu
- Hard Winter Wheat Genetics Research Unit, Agricultural Research Service, US Department of Agriculture (USDA-ARS), Manhattan, KS, United States
| | - Ming-Shun Chen
- Hard Winter Wheat Genetics Research Unit, Agricultural Research Service, US Department of Agriculture (USDA-ARS), Manhattan, KS, United States
| | - Guihua Bai
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
- Hard Winter Wheat Genetics Research Unit, Agricultural Research Service, US Department of Agriculture (USDA-ARS), Manhattan, KS, United States
| |
Collapse
|
2
|
Xu Y, La G, Fatima N, Liu Z, Zhang L, Zhao L, Chen MS, Bai G. Precise mapping of QTL for Hessian fly resistance in the hard winter wheat cultivar 'Overland'. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2021; 134:3951-3962. [PMID: 34471944 DOI: 10.1007/s00122-021-03940-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Accepted: 08/17/2021] [Indexed: 05/25/2023]
Abstract
A major QTL for Hessian fly resistance was precisely mapped to a 2.32 Mb region on chromosome 3B of the US hard winter wheat cultivar 'Overland'. The Hessian fly (HF, Mayetiola destructor) is a destructive insect pest of wheat in the USA and worldwide. Deploying HF-resistant cultivars is the most effective and economical approach to control this insect pest. A population of 186 recombinant inbred lines (RILs) was developed from 'Overland' × 'Overley' and phenotyped for responses to HF attack using the HF biotype 'Great Plains'. A high-density genetic linkage map was constructed using 1,576 single nucleotide polymorphism (SNP) markers generated by genotyping-by-sequencing (GBS). Two quantitative trait loci (QTLs) with a significant epistatic effect on HF resistance were mapped to chromosomes 3B (QHf.hwwg-3B) and 7A (QHf.hwwg-7A) in Overland, which are located in similar chromosome regions as found for H35 and H36 in the cultivar 'SD06165', respectively. QHf.hwwg-3B showed a much larger effect on HF resistance than QHf.hwwg-7A. Five and four GBS-SNPs, respectively, in the QHf.hwwg-3B and QHf.hwwg-7A QTL intervals were converted into Kompetitive allele specific polymerase chain reaction (KASP) markers. QHf.hwwg-3B was precisely mapped to a 2.32 Mb interval (2,479,314-4,799,538 bp) using near-isogenic lines (NILs) and RILs that have recombination within the QTL interval. The US winter wheat accessions carrying contrasting alleles at KASP markers KASP-3B4525164, KASP-7A47772047 and KASP-7A65090410 showed significant difference in HF resistance. The combination of the two KASP markers KASP-3B3797431 and KASP-3B4525164 is near-diagnostic for the detection of QHf.hwwg-3B in a US winter wheat panel and can be potentially used for screening the QTL in breeding programs.
Collapse
Affiliation(s)
- Yunfeng Xu
- Department of Agronomy, Kansas State University, Manhattan, KS, 66506, USA.
| | - Guixiao La
- Department of Agronomy, Kansas State University, Manhattan, KS, 66506, USA
- Industrial Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, Henan, China
| | - Nosheen Fatima
- Department of Agronomy, Kansas State University, Manhattan, KS, 66506, USA
| | - Zihui Liu
- Department of Agronomy, Kansas State University, Manhattan, KS, 66506, USA
- Institute of Genetics and Physiology, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang, 050051, Hebei, China
| | - Lirong Zhang
- Department of Agronomy, Kansas State University, Manhattan, KS, 66506, USA
- Department of Plant Pathology, Hebei Agricultural University, Baoding, 071001, Hebei, China
| | - Lanfei Zhao
- Department of Agronomy, Kansas State University, Manhattan, KS, 66506, USA
| | - Ming-Shun Chen
- Hard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, 66506, USA
| | - Guihua Bai
- Department of Agronomy, Kansas State University, Manhattan, KS, 66506, USA.
- Hard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, 66506, USA.
| |
Collapse
|
3
|
Khan MK, Pandey A, Hamurcu M, Avsaroglu ZZ, Ozbek M, Omay AH, Elbasan F, Omay MR, Gokmen F, Topal A, Gezgin S. Variability in Physiological Traits Reveals Boron Toxicity Tolerance in Aegilops Species. FRONTIERS IN PLANT SCIENCE 2021; 12:736614. [PMID: 34777419 PMCID: PMC8585849 DOI: 10.3389/fpls.2021.736614] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Accepted: 09/30/2021] [Indexed: 05/31/2023]
Abstract
Boron (B) is an important micronutrient required for the normal growth and development of plants. However, its excess in the soil causes severe damage to plant tissues, which affects the final yield. Wheat, one of the main staple crops, has been reported to be largely affected by B toxicity stress in arid and semi-arid regions of the world. The prevalence of B toxicity stress can be addressed by utilizing wild wheat genotypes with a variant level of stress tolerance. Wild wheat relatives have been identified as a prominent source of several abiotic stress-tolerant genes. However, Aegilops species in the tertiary gene pool of wheat have not been well exploited as a source of B toxicity tolerance. This study explores the root and shoot growth, proline induction, and extent of lipid peroxidation in 19 Aegilops accessions comprising 6 different species and the B-tolerant check wheat cultivar Bolal 2973 grown under Control (3.1 μM B), toxic (1 mM B), and highly toxic (10 mM B) B stress treatment. B toxicity stress had a more decisive impact on growth parameters as compared to the malondialdehyde (MDA) and proline content. The obtained results suggested that even the genotypes with high shoot B (SB) accumulation can be tolerant to B toxicity stress, and the mechanism of B redistribution in leaves should be studied in detail. It has been proposed that the studied Aegilops accessions can be potentially used for genetically improving the B toxicity-tolerance trait due to a high level of variation in the response toward high B toxicity. Though a number of accessions showed suppression in the root and shoot growth, very few accessions with stress adaptive plasticity to B toxicity stress leading to an improvement of shoot growth parameters could be determined. The two accessions, Aegilops biuncialis accession TGB 026219 and Aegilops columnaris accession TGB 000107, were identified as the potential genotypes with B toxicity stress tolerance and can be utilized for developing a pre-breeding material in B tolerance-based breeding programs.
Collapse
Affiliation(s)
- Mohd. Kamran Khan
- Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Turkey
| | - Anamika Pandey
- Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Turkey
| | - Mehmet Hamurcu
- Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Turkey
| | - Zuhal Zeynep Avsaroglu
- Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Turkey
| | - Merve Ozbek
- Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Turkey
| | - Ayse Humeyra Omay
- Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Turkey
| | - Fevzi Elbasan
- Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Turkey
| | - Makbule Rumeysa Omay
- Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Turkey
| | - Fatma Gokmen
- Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Turkey
| | - Ali Topal
- Department of Field Crops, Faculty of Agriculture, Selcuk University, Konya, Turkey
| | - Sait Gezgin
- Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Turkey
| |
Collapse
|
4
|
Herden T, Bönisch M, Friesen N. Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany, a Crop Wild Relative of celery. Ecol Evol 2020; 10:875-890. [PMID: 32015851 PMCID: PMC6988547 DOI: 10.1002/ece3.5947] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2019] [Revised: 11/25/2019] [Accepted: 12/03/2019] [Indexed: 11/19/2022] Open
Abstract
Helosciadium repens (Jacq.) W.D.J. Koch is threatened by genetic erosion. It is a Crop Wild Relative (CWR) of celery and celeriac and a potentially valuable genetic resource for plant breeding. The objective of this study was the analysis of distribution of genetic diversity with a set of selected populations in Germany. The results of the genetic analysis and data obtained during the site visits were used to identify a subset which was chosen to best represent the genetic diversity of H. repens in Germany. The chance of long-term conservation by securing the identified populations in genetic reserves is distinctly possible.Seven hundred and fifteen individuals from 27 sites were assessed using six simple sequence repeat markers. Discriminant analysis of principal components was used to identify six clusters of genetically similar individuals. The complementary compositional genetic differentiation Δj was calculated to designate a subset of populations chosen to best represent the overall genetic diversity. Entry 18R (Δ18R = 0.2498) represented its pooled remainder the best, while entry 22R (Δ22R = 0.4902) differed the most from its complement.Based on the results of the genetic analysis and information regarding the current conservation status, 14 most appropriate wild populations for potential genetic reserve were identified. The used markers display a low level of genetic variation between the analyzed populations, and a split between Northern and Southern populations was observed.CWR species are essential genetic resources for plant breeding and food security. However, 11.5% of the European CWRs are threatened. Therefore, it is of utmost importance to determine their genetic compositions. These insights will provide the fundamental basis for making crucial decisions concerning future conservation strategies for H. repens.
Collapse
Affiliation(s)
- Tobias Herden
- Botanical Garden of the Osnabrueck UniversityOsnabrueckGermany
| | - Maria Bönisch
- Federal Research Center for Cultivated PlantsJulius Kühn‐InstituteQuedlinburgGermany
| | - Nikolai Friesen
- Botanical Garden of the Osnabrueck UniversityOsnabrueckGermany
- Department of Pharmaceutical and Natural SciencesMinistry of Health of the Russian FederationI. M. Sechenov First Moscow State Medical UniversityMoscowRussia
| |
Collapse
|
5
|
Kishii M. An Update of Recent Use of Aegilops Species in Wheat Breeding. FRONTIERS IN PLANT SCIENCE 2019; 10:585. [PMID: 31143197 PMCID: PMC6521781 DOI: 10.3389/fpls.2019.00585] [Citation(s) in RCA: 62] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2019] [Accepted: 04/18/2019] [Indexed: 05/16/2023]
Abstract
Aegilops species have significantly contributed to wheat breeding despite the difficulties involved in the handling of wild species, such as crossability and incompatibility. A number of biotic resistance genes have been identified and incorporated into wheat varieties from Aegilops species, and this genus is also contributing toward improvement of complex traits such as yield and abiotic tolerance for drought and heat. The D genome diploid species of Aegilops tauschii has been utilized most often in wheat breeding programs. Other Aegilops species are more difficult to utilize in the breeding because of lower meiotic recombination frequencies; generally they can be utilized only after extensive and time-consuming procedures in the form of translocation/introgression lines. After the emergence of Ug99 stem rust and wheat blast threats, Aegilops species gathered more attention as a form of new resistance sources. This article aims to update recent progress on Aegilops species, as well as to cover new topics around their use in wheat breeding.
Collapse
Affiliation(s)
- Masahiro Kishii
- Global Wheat Program, International Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico
| |
Collapse
|
6
|
Raza MA, Yu N, Wang D, Cao L, Gan S, Chen L. Differential DNA methylation and gene expression in reciprocal hybrids between Solanum lycopersicum and S. pimpinellifolium. DNA Res 2018; 24:597-607. [PMID: 28679169 PMCID: PMC5726463 DOI: 10.1093/dnares/dsx028] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2017] [Accepted: 05/27/2017] [Indexed: 12/22/2022] Open
Abstract
Wide hybridization is a common and efficient breeding strategy for enhancing crop yield and quality. An interesting phenomenon is that the reciprocal hybrids usually show different phenotypes, and its underlying mechanism is not well understood. Here, we reported our comparative analysis of the DNA methylation patterns in Solanum lycopersicum, Solanum pimpinellifolium and their reciprocal hybrids by methylated DNA immunoprecipitation sequencing. The reciprocal hybrids had lower levels of DNA methylation in CpG islands and LTR retroelements when compared with those of their parents. Importantly, remarkable differences in DNA methylation patterns, mainly in introns and CDS regions, were revealed between the reciprocal hybrids. These different methylated regions were mapped to 79 genes, 14 of which were selected for analysis of gene expression levels. While there was an inverse correlation between DNA methylation and gene expression in promoter regions, the relationship was complicated in gene body regions. Further association analysis revealed that there were 15 differentially methylated genes associated with siRNAs, and that the methylation levels of these genes were inversely correlated with respective siRNAs. All these data raised the possibility that the direction of hybridization induced the divergent epigenomes leading to changes in the transcription levels of reciprocal hybrids.
Collapse
Affiliation(s)
- Muhammad Ammar Raza
- Department of Horticulture, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, P. R. China
| | - Ningning Yu
- Department of Horticulture, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, P. R. China
| | - Dan Wang
- Department of Horticulture, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, P. R. China
| | - Liwen Cao
- Department of Horticulture, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, P. R. China
| | - Susheng Gan
- Department of Horticulture, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, P. R. China.,Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, USA
| | - Liping Chen
- Department of Horticulture, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, P. R. China
| |
Collapse
|
7
|
Tan MK, El-Bouhssini M, Wildman O, Tadesse W, Chambers G, Luo S, Emebiri L. Development of SNP assays for hessian fly response genes, Hfr-1 and Hfr-2, for marker-assisted selection in wheat breeding. BMC Genet 2018; 19:50. [PMID: 30064355 PMCID: PMC6066933 DOI: 10.1186/s12863-018-0659-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2018] [Accepted: 07/23/2018] [Indexed: 11/25/2022] Open
Abstract
Background The Hessian fly response genes, Hfr-1 and Hfr-2, have been reported to be significantly induced in a Hessian fly attack. Nothing is known about the allelic variants of these two genes in susceptible (S) and resistant (R) wheat cultivars. Results Basic local alignment search tool (BLAST) analysis of Hessian fly response genes have identified three alleles of Hessian fly response gene 1 (Hfr-1) on chromosome 4AL and 7DS, and 10 alleles of Hessian fly response gene 2 (Hfr-2) on chromosome 2BS, 2DL, 4BS, 4BL, 5AL and 5BL. Resequencing exons of Hfr-1 and Hfr-2 have identified a single nucleotide polymorphism (SNP) in the lectin domain of each gene that segregates some R sources from S cultivars. Two SNP assays have been developed. The SNP883_Hfr-1 assay characterizes a ‘G/A’ SNP in Hfr-1, which differentiates 14 Hessian fly R cultivars from S ones. The SNP1294_Hfr-2 assay differentiates 12 R cultivars from S ones. Each of the two SNPs identified in Hfr-1 and Hfr-2 is ‘G/A’ and resulted in an amino acid change from isoleucine to valine in the lectin domain of the proteins of the alleles in the R cultivars. In addition to the genotype profiles of Hfr-1 and Hfr-2, generated for a set of 249 wheat cultivars which included a set of 39 R cultivars, this study has genotyped the Hessian fly response gene, HfrDrd, and the H32 gene for the wheat germplasm. Resistant cultivars from different origins with one, two, three or four resistance (R) genes in various combinations/permutations have been identified. Conclusion This study has identified allelic differences in two Hessian fly response genes, Hfr-1 and Hfr-2, between S and R cultivars and developed one SNP assay for each of the genes. These two SNP assays for Hfr-1 and Hfr-2, together with the published assays for HfrDrd and the H32 gene, can be used for the selection and incorporation of one or more of these 4 R genes identified in the different R sources in wheat breeding programs. Electronic supplementary material The online version of this article (10.1186/s12863-018-0659-y) contains supplementary material, which is available to authorized users.
Collapse
Affiliation(s)
- Mui-Keng Tan
- NSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Woodbridge Road, Menangle, NSW, 2568, Australia.
| | - Mustapha El-Bouhssini
- The International Center for Agricultural Research in the Dry Areas (ICARDA), Rabat Instituts, P.O. Box 6299, Rabat, Morocco
| | - Ossie Wildman
- NSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Woodbridge Road, Menangle, NSW, 2568, Australia
| | - Wuletaw Tadesse
- The International Center for Agricultural Research in the Dry Areas (ICARDA), Rabat Instituts, P.O. Box 6299, Rabat, Morocco
| | - Grant Chambers
- NSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Woodbridge Road, Menangle, NSW, 2568, Australia
| | - Shuming Luo
- NSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Woodbridge Road, Menangle, NSW, 2568, Australia
| | - Livinus Emebiri
- NSW Department of Primary Industries, Wagga Wagga Agricultural Research Institute, Pine Gully Road, Wagga Wagga, NSW, 2650, Australia.,Graham Centre for Agricultural Innovation (NSW Department of Primary Industries and Charles Sturt University), Wagga Wagga, NSW, 2650, Australia
| |
Collapse
|
8
|
Tan CT, Yu H, Yang Y, Xu X, Chen M, Rudd JC, Xue Q, Ibrahim AMH, Garza L, Wang S, Sorrells ME, Liu S. Development and validation of KASP markers for the greenbug resistance gene Gb7 and the Hessian fly resistance gene H32 in wheat. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2017; 130:1867-1884. [PMID: 28624908 DOI: 10.1007/s00122-017-2930-4] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2017] [Accepted: 05/30/2017] [Indexed: 05/19/2023]
Abstract
Greenbug and Hessian fly are important pests that decrease wheat production worldwide. We developed and validated breeder-friendly KASP markers for marker-assisted breeding to increase selection efficiency. Greenbug (Schizaphis graminum Rondani) and Hessian fly [Mayetiola destructor (Say)] are two major destructive insect pests of wheat (Triticum aestivum L.) throughout wheat production regions in the USA and worldwide. Greenbug and Hessian fly infestation can significantly reduce grain yield and quality. Breeding for resistance to these two pests using marker-assisted selection (MAS) is the most economical strategy to minimize losses. In this study, doubled haploid lines from the Synthetic W7984 × Opata M85 wheat reference population were used to construct linkage maps for the greenbug resistance gene Gb7 and the Hessian fly resistance gene H32 with genotyping-by-sequencing (GBS) and 90K array-based single nucleotide polymorphism (SNP) marker data. Flanking markers were closely linked to Gb7 and H32 and were located on chromosome 7DL and 3DL, respectively. Gb7-linked markers (synopGBS773 and synopGBS1141) and H32-linked markers (synopGBS901 and IWB65911) were converted into Kompetitive Allele Specific PCR (KASP) assays for MAS in wheat breeding. In addition, comparative mapping identified syntenic regions in Brachypodium distachyon, rice (Oryza sativa), and sorghum (Sorghum bicolor) for Gb7 and H32 that can be used for fine mapping and map-based cloning of the genes. The KASP markers developed in this study are the first set of SNPs tightly linked to Gb7 and H32 and will be very useful for MAS in wheat breeding programs and future genetic studies of greenbug and Hessian fly resistance.
Collapse
Affiliation(s)
- Chor-Tee Tan
- Texas A&M AgriLife Research, Amarillo, TX, 79106, USA
| | - Hangjin Yu
- Texas A&M AgriLife Research, Amarillo, TX, 79106, USA
| | - Yan Yang
- Texas A&M AgriLife Research, Amarillo, TX, 79106, USA
- Department of Soil and Crop Science, Texas A&M University, College Station, TX, 77843, USA
| | - Xiangyang Xu
- USDA-ARS Wheat, Peanut and Other Field Crop Research Unit, Stillwater, OK, 74075, USA
| | - Mingshun Chen
- USDA-ARS and Department of Entomology, Kansas State University, Manhattan, KS, 66506, USA
| | - Jackie C Rudd
- Texas A&M AgriLife Research, Amarillo, TX, 79106, USA
| | - Qingwu Xue
- Texas A&M AgriLife Research, Amarillo, TX, 79106, USA
| | - Amir M H Ibrahim
- Department of Soil and Crop Science, Texas A&M University, College Station, TX, 77843, USA
| | - Lisa Garza
- Texas A&M AgriLife Research, Amarillo, TX, 79106, USA
| | - Shichen Wang
- Genomic and Bioinformatics Services, Texas A&M AgriLife Research, College Station, TX, 77845, USA
| | - Mark E Sorrells
- Department of Plant Breeding and Genetics, Cornell University, Ithaca, NY, 14853, USA
| | - Shuyu Liu
- Texas A&M AgriLife Research, Amarillo, TX, 79106, USA.
| |
Collapse
|
9
|
Niranjana M. Gametocidal genes of Aegilops: segregation distorters in wheat-Aegilops wide hybridization. Genome 2017; 60:639-647. [PMID: 28654760 DOI: 10.1139/gen-2017-0023] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Aegilops is a genus belonging to the family Poaceace, which have played an indispensible role in the evolution of bread wheat and continues to do so by transferring genes by wide hybridization. Being the secondary gene pool of wheat, gene transfer from Aegilops poses difficulties and segregation distortion is common. Gametocidal genes are the most well characterized class of segregation distorters reported in interspecific crosses of wheat with Aegilops. These "selfish" genetic elements ensure their preferential transmission to progeny at the cost of gametes lacking them without providing any phenotypic benefits to the plant, thereby causing a proportional reduction in fertility. Gametocidal genes (Gc) have been reported in different species of Aegilops belonging to the sections Aegilops (Ae. geniculata and Ae. triuncialis), Cylindropyrum (Ae. caudata and Ae. cylindrica), and Sitopsis (Ae. longissima, Ae. sharonensis, and Ae. speltoides). Gametocidal activity is mostly confined to 2, 3, and 4 homeologous groups of C, S, S1, Ssh, and Mg genomes. Removal of such genes is necessary for successful alien gene introgression and can be achieved by mutagenesis or allosyndetic pairing. However, there are some instances where Gc genes are constructively utilized for development of deletion stocks in wheat, improving genetic variability and chromosome engineering.
Collapse
Affiliation(s)
- M Niranjana
- Indian Agricultural Research Institute, New Delhi, India.,Indian Agricultural Research Institute, New Delhi, India
| |
Collapse
|
10
|
Gong W, Han R, Li H, Song J, Yan H, Li G, Liu A, Cao X, Guo J, Zhai S, Cheng D, Zhao Z, Liu C, Liu J. Agronomic Traits and Molecular Marker Identification of Wheat- Aegilops caudata Addition Lines. FRONTIERS IN PLANT SCIENCE 2017; 8:1743. [PMID: 29075275 PMCID: PMC5644244 DOI: 10.3389/fpls.2017.01743] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2017] [Accepted: 09/25/2017] [Indexed: 05/05/2023]
Abstract
Aegilops caudata is an important gene source for wheat breeding. Intensive evaluation of its utilization value is an essential first step prior to its application in breeding. In this research, the agronomical and quality traits of Triticum aestivum-Ae. caudata additions B-G (homoeologous groups not identified) were analyzed and evaluated. Disease resistance tests showed that chromosome D of Ae. caudata might possess leaf rust resistance, and chromosome E might carry stem rust and powdery mildew resistance genes. Investigations into agronomical traits suggested that the introduction of the Ae. caudata chromosome in addition line F could reduce plant height. Grain quality tests showed that the introduction of chromosomes E or F into wheat could increase its protein and wet gluten content. Therefore, wheat-Ae. caudata additions D-F are all potentially useful candidates for chromosome engineering activities to create useful wheat-alien chromosome introgressions. A total of 55 EST-based molecular markers were developed and then used to identify the chromosome homoeologous group of each of the Ae. caudata B-G chromosomes. Marker analysis indicated that the Ae. caudata chromosomes in addition lines B to G were structurally altered, therefore, a large population combined with intensive screening pressure should be taken into consideration when inducing and screening for wheat-Ae. caudata compensating translocations. Marker data also indicated that the Ae. caudata chromosomes in addition lines C-F were 5C, 6C, 7C, and 3C, respectively, while the homoeologous group of chromosomes B and G of Ae. caudata are as yet undetermined and need further research.
Collapse
Affiliation(s)
- Wenping Gong
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Ran Han
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Haosheng Li
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Jianmin Song
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Hongfei Yan
- College of Plant Protection, Agricultural University of Hebei, Baoding, China
| | - Genying Li
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
- College of Life Science, Shandong Normal University, Jinan, China
| | - Aifeng Liu
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Xinyou Cao
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
- College of Life Science, Shandong Normal University, Jinan, China
| | - Jun Guo
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Shengnan Zhai
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Dungong Cheng
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Zhendong Zhao
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
| | - Cheng Liu
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
- College of Life Science, Shandong Normal University, Jinan, China
- *Correspondence: Cheng Liu
| | - Jianjun Liu
- Crop Research Institute, Shandong Academy of Agricultural Sciences/Key Laboratory of Wheat Biology and Genetic Improvement in the Northern Yellow-Huai Rivers Valley of Ministry of Agriculture/National Engineering Laboratory for Wheat and Maize, Jinan, China
- Jianjun Liu
| |
Collapse
|
11
|
Shukle RH, Cambron SE, Moniem HA, Schemerhorn BJ, Redding J, David Buntin G, Flanders KL, Reisig DD, Mohammadi M. Effectiveness of Genes for Hessian Fly (Diptera: Cecidomyiidae) Resistance in the Southeastern United States. JOURNAL OF ECONOMIC ENTOMOLOGY 2016; 109:399-405. [PMID: 26468515 DOI: 10.1093/jee/tov292] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2015] [Accepted: 09/09/2015] [Indexed: 06/05/2023]
Abstract
The Hessian fly, Mayetiola destructor (Say) (Diptera: Cecidomyiidae), is the most important insect pest of wheat (Triticum aestivum L. subsp. aestivum) in the southeastern United States, and the deployment of genetically resistant wheat is the most effective control. However, the use of resistant wheat results in the selection of pest genotypes that can overcome formerly resistant wheat. We have evaluated the effectiveness of 16 resistance genes for protection of wheat from Hessian fly infestation in the southeastern United States. Results documented that while 10 of the genes evaluated could provide protection of wheat, the most highly effective genes were H12, H18, H24, H25, H26, and H33. However, H12 and H18 have been reported to be only partially effective in field evaluations, and H24, H25, and H26 may be associated with undesirable effects on agronomic traits when introgressed into elite wheat lines. Thus, the most promising new gene for Hessian fly resistance appears to be H33. These results indicate that identified highly effective resistance in wheat to the Hessian fly is a limited resource and emphasize the need to identify novel sources of resistance. Also, we recommend that the deployment of resistance in gene pyramids and the development of novel strategies for engineered resistance be considered.
Collapse
Affiliation(s)
- Richard H Shukle
- Crop Production and Pest Control Research Unit, USDA-ARS, West Lafayette, IN 47907 (; ; ; ; ), Department of Entomology, Purdue University, West Lafayette, IN 47907 , These authors contributed equally to this manuscript,
| | - Sue E Cambron
- Crop Production and Pest Control Research Unit, USDA-ARS, West Lafayette, IN 47907 (; ; ; ; ), Department of Entomology, Purdue University, West Lafayette, IN 47907 , These authors contributed equally to this manuscript
| | - Hossam Abdel Moniem
- Department of Entomology, Purdue University, West Lafayette, IN 47907 , Department of Zoology, Faculty of Science, Suez Canal University, Ismailia 41522, Egypt
| | - Brandon J Schemerhorn
- Crop Production and Pest Control Research Unit, USDA-ARS, West Lafayette, IN 47907 (; ; ; ; ), Department of Entomology, Purdue University, West Lafayette, IN 47907
| | - Julie Redding
- Crop Production and Pest Control Research Unit, USDA-ARS, West Lafayette, IN 47907 (; ; ; ; )
| | - G David Buntin
- Department of Entomology, University of Georgia College of Agriculture Experiment Stations, Georgia Station, Griffin, GA 30223
| | - Kathy L Flanders
- Department of Entomology and Plant Pathology, Auburn University, Auburn, AL 36849
| | - Dominic D Reisig
- Department of Entomology, North Carolina State University, The Vernon James Research & Extension Center, 207 Research Station Road, Plymouth, NC 27962 , and
| | - Mohsen Mohammadi
- Department of Agronomy, Purdue University, West Lafayette, IN 47907
| |
Collapse
|
12
|
Molnár I, Vrána J, Farkas A, Kubaláková M, Cseh A, Molnár-Láng M, Doležel J. Flow sorting of C-genome chromosomes from wild relatives of wheat Aegilops markgrafii, Ae. triuncialis and Ae. cylindrica, and their molecular organization. ANNALS OF BOTANY 2015; 116:189-200. [PMID: 26043745 PMCID: PMC4512188 DOI: 10.1093/aob/mcv073] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2015] [Revised: 03/27/2015] [Accepted: 04/15/2015] [Indexed: 05/18/2023]
Abstract
BACKGROUND AND AIMS Aegilops markgrafii (CC) and its natural hybrids Ae. triuncialis (U(t)U(t)C(t)C(t)) and Ae. cylindrica (D(c)D(c)C(c)C(c)) represent a rich reservoir of useful genes for improvement of bread wheat (Triticum aestivum), but the limited information available on their genome structure and the shortage of molecular (cyto-) genetic tools hamper the utilization of the extant genetic diversity. This study provides the complete karyotypes in the three species obtained after fluorescent in situ hybridization (FISH) with repetitive DNA probes, and evaluates the potential of flow cytometric chromosome sorting. METHODS The flow karyotypes obtained after the analysis of 4',6-diamidino-2-phenylindole (DAPI)-stained chromosomes were characterized and the chromosome content of the peaks on the flow karyotypes was determined by FISH. Twenty-nine conserved orthologous set (COS) markers covering all seven wheat homoeologous chromosome groups were used for PCR with DNA amplified from flow-sorted chromosomes and genomic DNA. KEY RESULTS FISH with repetitive DNA probes revealed that chromosomes 4C, 5C, 7C(t), T6U(t)S.6U(t)L-5C(t)L, 1C(c) and 5D(c) could be sorted with purities ranging from 66 to 91 %, while the remaining chromosomes could be sorted in groups of 2-5. This identified a partial wheat-C-genome homology for group 4 and 5 chromosomes. In addition, 1C chromosomes were homologous with group 1 of wheat; a small segment from group 2 indicated 1C-2C rearrangement. An extensively rearranged structure of chromosome 7C relative to wheat was also detected. CONCLUSIONS The possibility of purifying Aegilops chromosomes provides an attractive opportunity to investigate the structure and evolution of the Aegilops C genome and to develop molecular tools to facilitate the identification of alien chromatin and support alien introgression breeding in bread wheat.
Collapse
Affiliation(s)
- István Molnár
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, Brunszvik u. 2, H-2462 Martonvásár, Hungary and
| | - Jan Vrána
- Centre of the Region Hana for Biotechnological and Agricultural Research, Institute of Experimental Botany, Šlechtitelů 31, CZ-78371 Olomouc, Czech Republic
| | - András Farkas
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, Brunszvik u. 2, H-2462 Martonvásár, Hungary and
| | - Marie Kubaláková
- Centre of the Region Hana for Biotechnological and Agricultural Research, Institute of Experimental Botany, Šlechtitelů 31, CZ-78371 Olomouc, Czech Republic
| | - András Cseh
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, Brunszvik u. 2, H-2462 Martonvásár, Hungary and
| | - Márta Molnár-Láng
- Agricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, Brunszvik u. 2, H-2462 Martonvásár, Hungary and
| | - Jaroslav Doležel
- Centre of the Region Hana for Biotechnological and Agricultural Research, Institute of Experimental Botany, Šlechtitelů 31, CZ-78371 Olomouc, Czech Republic
| |
Collapse
|
13
|
Mirzaghaderi G, Houben A, Badaeva ED. Molecular-cytogenetic analysis of Aegilops triuncialis and identification of its chromosomes in the background of wheat. Mol Cytogenet 2014; 7:91. [PMID: 25505933 PMCID: PMC4263106 DOI: 10.1186/s13039-014-0091-6] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2014] [Accepted: 11/20/2014] [Indexed: 12/02/2022] Open
Abstract
Background Species belonging to the genus Aegilops L. are an important source of genetic material for expanding genetic variability of wheat. Ae. triuncialis is an allotetraploid in this genus which was originated from hybridization of Ae. umbellulata and Ae. markgrafii (Greuter) Hammer. Although the Ae. triuncialis karyotype was thoroughly examined by conventional chromosome staining and Giemsa C-banding, it is still poorly characterized using FISH markers. The objective of this study was to test the fluorescence in situ hybridization (FISH) patterns of Ae. triuncialis (2n = 4x = 28, CtCtUtUt) chromosomes using different repetitive sequences and to compare the produced patterns to the chromosomes of its diploid ancestors, with the aim of establishing a generalized Ae. triuncialis idiogram and detection of Aegilops chromosomes in the background of wheat. Results The probes pSc119.2-1, pTa535-1, pAs1-1, (CTT)10 and the 45S rDNA clone from wheat (pTa71) were hybridized to chromosomes of Ae. triuncialis and compared with its diploid progenitors (Ae. umbellulata Zhuk., 2n = 2x = 14, UU and Ae. markgrafii (Greuter) Hammer, 2n = 2x = 14, CC) and Ae. cylindrica Host. (2n = 4x = 28, DcDcCcCc), another tetraploid species containing the C-genome. Ae. cylindrica was further analyzed by genomic in situ hybridization (GISH) using C genome probe in order to identify any possible translocation. Conclusions In general, FISH patterns of the Ut- and Ct-genome chromosomes of Ae. triuncialis were similar to those of U- and C-genome chromosomes of the diploid progenitor species Ae. umbellulata and Ae. markgrafii respectively, although some differences were observed. Two major 45S rDNA loci were revealed in the short arm of chromosomes A and C, of the Ct genome which correspond to homoeologous groups 1 and 5 respectively. Minor 45S rDNA loci were mapped on the short arm of chromosomes 1Ut and 5Ut. GISH analysis revealed three different non-reciprocal homologous or heterologous translocations between Cc and Dc chromosomes in all studied accessions of Ae. cylindrica. Electronic supplementary material The online version of this article (doi:10.1186/s13039-014-0091-6) contains supplementary material, which is available to authorized users.
Collapse
Affiliation(s)
- Ghader Mirzaghaderi
- Department of Agronomy and Plant Breeding, Faculty of Agriculture, University of Kurdistan, P. O. Box 66177-15175, Sanandaj, Iran
| | - Andreas Houben
- Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK) Gatersleben, Corrensstraße 3, 06466 Stadt Seeland, Germany
| | - Ekaterina D Badaeva
- N.I. Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia
| |
Collapse
|
14
|
Li J, Sun Q, Yu N, Zhu J, Zou X, Qi Z, Ghani MA, Chen L. The role of small RNAs on phenotypes in reciprocal hybrids between Solanum lycopersicum and S. pimpinellifolium. BMC PLANT BIOLOGY 2014; 14:296. [PMID: 25367629 PMCID: PMC4232637 DOI: 10.1186/s12870-014-0296-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2014] [Accepted: 10/20/2014] [Indexed: 05/30/2023]
Abstract
BACKGROUND Reciprocal hybrids showing different phenotypes have been well documented in previous studies, and many factors accounting for different phenotypes have been extensively investigated. However, less is known about whether the profiles of small RNAs differ between reciprocal hybrids and how these small RNAs affect gene expression and phenotypes. To better understand this mechanism, the role of small RNAs on phenotypes in reciprocal hybrids was analysed. RESULTS Reciprocal hybrids between Solanum lycopersicum cv. Micro-Tom and S. pimpinellifolium line WVa700 were generated. Significantly different phenotypes between the reciprocal hybrids were observed, including fruit shape index, single fruit weight and plant height. Then, through the high-throughput sequencing of small RNAs, we found that the expression levels of 76 known miRNAs were highly variable between the reciprocal hybrids. Subsequently, a total of 410 target genes were predicted to correspond with these differentially expressed miRNAs. Furthermore, gene ontology (GO) annotation indicated that those target genes are primarily involved in metabolic processes. Finally, differentially expressed miRNAs, such as miR156f and 171a, and their target genes were analysed by qRT-PCR, and their expression levels were well correlated with the different phenotypes. CONCLUSIONS This study showed that the profiles of small RNAs differed between the reciprocal hybrids, and differentially expressed genes were also observed based on the different phenotypes. The qRT-PCR results of target genes showed that differentially expressed miRNAs negatively regulated their target genes. Moreover, the expression of target genes was well correlated with the observations of different phenotypes. These findings may aid in elucidating small RNAs contribute significantly to different phenotypes through epigenetic modification during reciprocal crossing.
Collapse
Affiliation(s)
- Junxing Li
- />Institute of Vegetable Science, Zhejiang University, 866 Yuhangtang Road, Hangzhou, Zhejiang Province P.R. China
- />Key Laboratory of Horticultural Plants Growth, Development and Biotechnology, Agricultural Ministry of China, Hangzhou, 310058 P.R. China
| | - Qian Sun
- />Institute of Vegetable Science, Zhejiang University, 866 Yuhangtang Road, Hangzhou, Zhejiang Province P.R. China
- />Key Laboratory of Horticultural Plants Growth, Development and Biotechnology, Agricultural Ministry of China, Hangzhou, 310058 P.R. China
| | - Ningning Yu
- />Institute of Vegetable Science, Zhejiang University, 866 Yuhangtang Road, Hangzhou, Zhejiang Province P.R. China
- />Key Laboratory of Horticultural Plants Growth, Development and Biotechnology, Agricultural Ministry of China, Hangzhou, 310058 P.R. China
| | - Jiajin Zhu
- />Fuli Institute for Food Science, College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, 310058 P.R. China
| | - Xiaoxia Zou
- />Institute of Vegetable Science, Zhejiang University, 866 Yuhangtang Road, Hangzhou, Zhejiang Province P.R. China
- />Key Laboratory of Horticultural Plants Growth, Development and Biotechnology, Agricultural Ministry of China, Hangzhou, 310058 P.R. China
| | - Zhenyu Qi
- />Institute of Vegetable Science, Zhejiang University, 866 Yuhangtang Road, Hangzhou, Zhejiang Province P.R. China
- />Key Laboratory of Horticultural Plants Growth, Development and Biotechnology, Agricultural Ministry of China, Hangzhou, 310058 P.R. China
| | - Muhammad Awais Ghani
- />Institute of Vegetable Science, Zhejiang University, 866 Yuhangtang Road, Hangzhou, Zhejiang Province P.R. China
- />Key Laboratory of Horticultural Plants Growth, Development and Biotechnology, Agricultural Ministry of China, Hangzhou, 310058 P.R. China
| | - Liping Chen
- />Institute of Vegetable Science, Zhejiang University, 866 Yuhangtang Road, Hangzhou, Zhejiang Province P.R. China
- />Key Laboratory of Horticultural Plants Growth, Development and Biotechnology, Agricultural Ministry of China, Hangzhou, 310058 P.R. China
| |
Collapse
|
15
|
Scott JC, Manisterski J, Sela H, Ben-Yehuda P, Steffenson BJ. Resistance of Aegilops Species from Israel to Widely Virulent African and Israeli Races of the Wheat Stem Rust Pathogen. PLANT DISEASE 2014; 98:1309-1320. [PMID: 30703930 DOI: 10.1094/pdis-01-14-0062-re] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Widely virulent races of the stem rust pathogen (Puccinia graminis f. sp. tritici) such as those isolated from Africa (e.g., TTKSK, isolate synonym Ug99) threaten wheat production worldwide. To identify Aegilops accessions with effective resistance to such virulent stem rust races, up to 10 different species from Israel were evaluated against African races TTKSK, TTKST, and TTTSK and the Israeli race TTTTC as seedlings in the greenhouse. A wide diversity of stem rust reactions was observed across the Aegilops spp. and ranged from highly resistant (i.e., infection type 0) to highly susceptible (infection type 4). The frequency of resistance within a species to races TTTTC and TTKSK ranged from 7 and 14%, respectively, in Aegilops searsii to 98 and 100% in AE. speltoides. In all, 346 accessions were found resistant to the three African races and 138 accessions were resistant (or heterogeneous with a resistant component) to all four races. The species with broadly resistant accessions included Ae. longissima (59 accessions), Ae. peregrina (47 accessions), Ae. sharonensis (15 accessions), Ae. geniculata (9 accessions), Ae. kotschyi (5 accessions), and Ae. bicornis (3 accessions). Few geographical trends or correlations with climatic variables were observed with respect to stem rust resistance in the Aegilops spp. The exception was Ae. longissima infected with race TTTTC, where a high frequency of resistance was found in central and northern Israel and a very low frequency in southern Israel (Negev desert region). This geographical trend followed a pattern of annual precipitation in Israel, and a significant correlation was found between this variable and resistance in Ae. longissima. Although difficult, it is feasible to transfer resistance genes from Aegilops spp. into wheat through conventional wide-crossing schemes or, alternatively, a cloning and transformation approach. The broadly resistant accessions identified in this study will be valuable in these research programs.
Collapse
Affiliation(s)
- Jeness C Scott
- Department of Plant Pathology, University of Minnesota, St. Paul 55108
| | - Jacob Manisterski
- Institute for Cereal Crops Improvement, Tel Aviv University, Ramat Aviv 69978, Israel
| | - Hanan Sela
- Institute for Cereal Crops Improvement, Tel Aviv University, Ramat Aviv 69978, Israel
| | - Pnina Ben-Yehuda
- Institute for Cereal Crops Improvement, Tel Aviv University, Ramat Aviv 69978, Israel
| | | |
Collapse
|
16
|
Li C, Chen M, Chao S, Yu J, Bai G. Identification of a novel gene, H34, in wheat using recombinant inbred lines and single nucleotide polymorphism markers. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2013; 126:2065-71. [PMID: 23689741 DOI: 10.1007/s00122-013-2118-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2012] [Accepted: 05/08/2013] [Indexed: 05/03/2023]
Abstract
Hessian fly (HF), Mayetiola destructor, is an important pest of wheat (Triticum aestivum L.) worldwide. Because it has multiple biotypes that are virulent to different wheat HF resistance genes, pyramiding multiple resistance genes in a cultivar can improve resistance durability, and finding DNA markers tightly linked to these genes is essential to this process. This study identified quantitative trait loci (QTLs) for Hessian fly resistance (HFR) in the wheat cultivar 'Clark' and tightly linked DNA markers for the QTLs. A linkage map was constructed with single nucleotide polymorphism and simple sequence repeat markers using a population of recombinant inbred lines (RILs) derived from the cross 'Ning7840' × 'Clark' by single-seed descent. Two QTLs associated with resistance to fly biotype GP were identified on chromosomes 6B and 1A, with the resistance alleles contributed from 'Clark'. The QTL on 6B flanked by loci Xsnp921 and Xsnp2745 explained about 37.2 % of the phenotypic variation, and the QTL on 1A was flanked by Xgwm33 and Xsnp5150 and accounted for 13.3 % of phenotypic variation for HFR. The QTL on 6B has not been reported before and represents a novel wheat gene with resistance to HF, thus, it is designated H34. A significant positive epistasis was detected between the two QTLs that accounted for about 9.5 % of the mean phenotypic variation and increased HFR by 0.16. Our results indicated that different QTLs may contribute different degrees of resistance in a cultivar and that epistasis may play an important role in HFR.
Collapse
Affiliation(s)
- Chunlian Li
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi, China
| | | | | | | | | |
Collapse
|
17
|
Tan CT, Carver BF, Chen MS, Gu YQ, Yan L. Genetic association of OPR genes with resistance to Hessian fly in hexaploid wheat. BMC Genomics 2013; 14:369. [PMID: 23724909 PMCID: PMC3674912 DOI: 10.1186/1471-2164-14-369] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2013] [Accepted: 05/17/2013] [Indexed: 01/19/2023] Open
Abstract
BACKGROUND Hessian fly (Mayetiola destructor) is one of the most destructive pests of wheat. The genes encoding 12-oxo-phytodienoic acid reductase (OPR) and lipoxygenase (LOX) play critical roles in insect resistance pathways in higher plants, but little is known about genes controlling resistance to Hessian fly in wheat. RESULTS In this study, 154 F6:8 recombinant inbred lines (RILs) generated from a cross between two cultivars, 'Jagger' and '2174' of hexaploid wheat (2n = 6 × =42; AABBDD), were used to map genes associated with resistance to Hessian fly. Two QTLs were identified. The first one was a major QTL on chromosome 1A (QHf.osu-1A), which explained 70% of the total phenotypic variation. The resistant allele at this locus in cultivar 2174 could be orthologous to one or more of the previously mapped resistance genes (H9, H10, H11, H16, and H17) in tetraploid wheat. The second QTL was a minor QTL on chromosome 2A (QHf.osu-2A), which accounted for 18% of the total phenotypic variation. The resistant allele at this locus in 2174 is collinear to an Yr17-containing-fragment translocated from chromosome 2N of Triticum ventricosum (2n = 4 × =28; DDNN) in Jagger. Genetic mapping results showed that two OPR genes, TaOPR1-A and TaOPR2-A, were tightly associated with QHf.osu-1A and QHf.osu-2A, respectively. Another OPR gene and three LOX genes were mapped but not associated with Hessian fly resistance in the segregating population. CONCLUSIONS This study has located two major QTLs/genes in bread wheat that can be directly used in wheat breeding programs and has also provided insights for the genetic association and disassociation of Hessian fly resistance with OPR and LOX genes in wheat.
Collapse
Affiliation(s)
- Chor Tee Tan
- Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK 74078, USA
| | | | | | | | | |
Collapse
|
18
|
Population structure and the colonization route of one of the oldest North American invasive insects: stories from the worn road of the Hessian fly, Mayetiola destructor (Say). PLoS One 2013; 8:e59833. [PMID: 23544103 PMCID: PMC3609732 DOI: 10.1371/journal.pone.0059833] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2012] [Accepted: 02/21/2013] [Indexed: 01/31/2023] Open
Abstract
An integral part to understanding the biology of an invasive species is determining its origin, particularly in pest species. As one of the oldest known invasive species, the goals of this study were to evaluate the evidence of a westward expansion of Hessian fly into North America, from a potential singular introduction event, and the population genetic structure of current populations. Levels of genetic diversity and population structure in the Hessian fly were compared across North America, Europe, North Africa, Western Asia, and New Zealand. Furthermore, Old World populations were evaluated as possible sources of introduction. We tested diversity and population structure by examining 18 microsatellite loci with coverage across all four Hessian fly chromosomes. Neither genetic diversity nor population genetic structure provided evidence of a westward movement from a single introduction in North America. Introduced populations in North America did not show identity or assignment to any Old World population, likely indicating a multiple introduction scenario with subsequent gene flow between populations. Diversity and selection were assessed on a chromosomal level, with no differences in diversity or selection between chromosomes or between native and introduced populations.
Collapse
|
19
|
Hao Y, Cambron SE, Chen Z, Wang Y, Bland DE, Buntin GD, Johnson JW. Characterization of new loci for Hessian fly resistance in common wheat. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2013; 126:1067-76. [PMID: 23296492 DOI: 10.1007/s00122-012-2037-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2012] [Accepted: 12/16/2012] [Indexed: 05/19/2023]
Abstract
The discovery of several new loci for resistance to Hessian fly was reported here. QHf.uga-6AL, the late HR61 was recognized from wheat cultivar 26R61 on the distal end of 6AL with resistance to both biotypes E and vH13. It is the first gene or QTL found on this particular chromosome. QHf.uga-3DL and QHf.uga-1AL, physically assigned to the deletion bins 3DL2-0.27-0.81 and 1AL1-0.17-0.61, respectively, were detected for resistance to biotype vH13. Both QTL should represent new loci for Hessian fly resistance and the latter was detectable only in the late seedling stage when tolerance was evident. In addition, QHf.uga-6DS-C and QHf.uga-1AS had minor effect and were identified from the susceptible parent AGS 2000 for resistance to biotype E and vH13, respectively. QHf.uga-6DS-C is different from the known gene H13 on 6DS and QHf.uga-1AS is different from H9 gene cluster on 1AS. These loci also might be new components of Hessian fly resistance, although their LOD values were not highly significant. The QTL detections were all conducted on a RIL mapping population of 26R61/AGS 2000 with good genome coverage of molecular markers. The strategy used in the current study will serve as a good starting point for the discovery and mapping of resistance genes including tolerance to the pest and the closely linked markers will certainly be useful in selecting or pyramiding of these loci in breeding programs.
Collapse
Affiliation(s)
- Yuanfeng Hao
- Department of Crop and Soil Sciences, University of Georgia, Griffin Campus, Griffin, GA 30223, USA.
| | | | | | | | | | | | | |
Collapse
|
20
|
Johnson AJ, Weintraub PG, Katoch R, Schemerhorn BJ, Shukle RH. Biological and molecular characterization of Hessian fly (Diptera: Cecidomyiidae) from Israel. BULLETIN OF ENTOMOLOGICAL RESEARCH 2012; 102:632-643. [PMID: 22564785 DOI: 10.1017/s0007485312000235] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Samples of a dipteran pest of wheat were tested to confirm identity, describe local populations and suggest the use of deploying resistance (R) genes in wheat cultivars for control of Mayetiola destructor, Hessian fly (HF). Morphological evaluation of adults and a free-choice oviposition preference test documenting that females overwhelmingly preferred to oviposit on wheat instead of barley supported they were HF. Using the cytochrome c oxidase subunit I (coxI), the Barcoding Region, nine haplotypes were revealed. Two were found only in the Israeli collections and averaged 3% sequence divergence compared to the other seven haplotypes found in the United States, Israel and Syria. In evaluations of virulence, the Israeli HF in culture was virulent to 11 of the 19 (R) genes tested, and complementation analysis documented that, for four of the R genes tested, the Israeli HF shared loci for virulence with HF from the United States. Levels of HF infestation at seven Israeli fields were at least at the 5-8% level, which historically has indicated a significant yield loss. Microsatellite genotyping of the five HF collections from Israel revealed mixed populations in Israel that are distinctly separate from the single population in Syria.
Collapse
Affiliation(s)
- A J Johnson
- USDA-ARS, Crop Production and Pest Control Unit, West Lafayette, IN 47907, USA
| | | | | | | | | |
Collapse
|
21
|
Shukle RH, Subramanyam S, Williams CE. Effects of antinutrient proteins on Hessian fly (Diptera: Cecidomyiidae) larvae. JOURNAL OF INSECT PHYSIOLOGY 2012; 58:41-8. [PMID: 21983260 DOI: 10.1016/j.jinsphys.2011.09.012] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2011] [Revised: 09/19/2011] [Accepted: 09/21/2011] [Indexed: 05/03/2023]
Abstract
One strategy to enhance the durability of Hessian fly resistance (R) genes in wheat is to combine them with transgenes for resistance. To identify potential transgenes for resistance a protocol for rapidly screening the proteins they encode for efficacy toward resistance is required. However, the Hessian fly is an obligate parasite of wheat and related grasses. Consequently, no protocol for in vitro delivery of antinutrient or toxic proteins to feeding larvae is available. We report here the development of a Hessian fly in plantatranslocation (HIT) feeding assay and the evaluation of eight lectins and the Bowman-Birk serine proteinase inhibitor for potential in transgenic resistance. Of the antinutrient proteins evaluated, Galanthus nivalis L. agglutinin (GNA), commonly termed snowdrop lectin, was the most efficacious. Ingestion of GNA caused a significant reduction in growth of Hessian fly larvae, disruption of midgut microvilli, and changes in transcript level of genes involved in carbohydrate metabolism, digestion, detoxification, and stress response. These effects of GNA are discussed from the perspective of larval Hessian fly physiology.
Collapse
Affiliation(s)
- Richard H Shukle
- USDA-ARS Crop Production and Pest Control Research Unit, West Lafayette, IN 47907, USA.
| | | | | |
Collapse
|
22
|
Stuart JJ, Chen MS, Shukle R, Harris MO. Gall midges (Hessian flies) as plant pathogens. ANNUAL REVIEW OF PHYTOPATHOLOGY 2012; 50:339-57. [PMID: 22656645 DOI: 10.1146/annurev-phyto-072910-095255] [Citation(s) in RCA: 82] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Gall midges constitute an important group of plant-parasitic insects. The Hessian fly (HF; Mayetiola destructor), the most investigated gall midge, was the first insect hypothesized to have a gene-for-gene interaction with its host plant, wheat (Triticum spp.). Recent investigations support that hypothesis. The minute larval mandibles appear to act in a manner that is analogous to nematode stylets and the haustoria of filamentous plant pathogens. Putative effector proteins are encoded by hundreds of genes and expressed in the HF larval salivary gland. Cultivar-specific resistance (R) genes mediate a highly localized plant reaction that prevents the survival of avirulent HF larvae. Fine-scale mapping of HF avirulence (Avr) genes provides further evidence of effector-triggered immunity (ETI) against HF in wheat. Taken together, these discoveries suggest that the HF, and other gall midges, may be considered biotrophic, or hemibiotrophic, plant pathogens, and they demonstrate the potential that the wheat-HF interaction has in the study of insect-induced plant gall formation.
Collapse
Affiliation(s)
- Jeff J Stuart
- Department of Entomology, Purdue University, West Lafayette, Indiana 47907-2089, USA.
| | | | | | | |
Collapse
|
23
|
Shukle RH, Subramanyam S, Saltzmann KA, Williams CE. Ultrastructural changes in the midguts of Hessian fly larvae feeding on resistant wheat. JOURNAL OF INSECT PHYSIOLOGY 2010; 56:754-60. [PMID: 20116382 DOI: 10.1016/j.jinsphys.2010.01.005] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2009] [Revised: 01/19/2010] [Accepted: 01/19/2010] [Indexed: 05/03/2023]
Abstract
The focus of the present study was to compare ultrastructure in the midguts of larvae of the Hessian fly, Mayetiola destructor (Say), under different feeding regimens. Larvae were either fed on Hessian fly-resistant or -susceptible wheat, and each group was compared to starved larvae. Within 3h of larval Hessian fly feeding on resistant wheat, midgut microvilli were disrupted, and after 6h, microvilli were absent. The disruption in microvilli in larvae feeding on resistant wheat were similar to those reported for midgut microvilli of European corn borer, Ostrinia nubilasis (Hubner), larvae fed a diet containing wheat germ agglutinin. Results from the present ultrastructural study, coupled with previous studies documenting expression of genes encoding lectin and lectin-like proteins is rapidly up-regulated in resistant wheat to larval Hessian fly, are indications that the midgut is a target of plant resistance compounds. In addition, the midgut of the larval Hessian fly is apparently unique among other dipterans in that no peritrophic membrane was observed. Ultrastructural changes in the midgut are discussed from the prospective of their potential affects on the gut physiology of Hessian fly larvae and the mechanism of antibiosis in the resistance of wheat to Hessian fly attack.
Collapse
Affiliation(s)
- Richard H Shukle
- USDA-ARS Crop Production and Pest Control Research Unit, West Lafayette, IN 47907, USA.
| | | | | | | |
Collapse
|
24
|
Shukle RH, Mittapalli O, Morton PK, Chen MS. Characterization and expression analysis of a gene encoding a secreted lipase-like protein expressed in the salivary glands of the larval Hessian fly, Mayetiola destructor (Say). JOURNAL OF INSECT PHYSIOLOGY 2009; 55:104-111. [PMID: 19026654 DOI: 10.1016/j.jinsphys.2008.10.008] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2008] [Revised: 10/17/2008] [Accepted: 10/20/2008] [Indexed: 05/27/2023]
Abstract
In a salivary gland transcriptomics study we identified a cDNA with a full-length open reading frame for a gene (MdesL1) encoding a lipase-like protein expressed in the salivary glands of the larval Hessian fly, Mayetiola destructor (Say). Fluorescent in situ hybridization on salivary polytenes positioned MdesL1 on the long arm of Autosome 1. BLASTp and conserved domain searches revealed the deduced amino acid sequence contained a lipase superfamily domain with similarity to lipases and phospholipases from other insects. A secretion signal peptide was identified at the amino terminus of the deduced amino acid sequence. Analysis of the transcript of MdesL1 in larval Hessian fly tissues by quantitative real-time PCR (qPCR) revealed the greatest abundance was in salivary glands. Analysis of transcript levels during development showed the greatest level was detected in feeding 1st-instar and early 2nd-instar larvae. Transcript levels increased dramatically over time in larvae feeding on susceptible wheat but were detected at low levels in larvae feeding on resistant wheat. These data suggest the protein encoded by MdesL1 is likely secreted into host-plant cells during larval feeding and could be involved in extra-oral digestion and changes in host-cell permeability or in generating a second messenger in a host-cell-signaling cascade.
Collapse
Affiliation(s)
- Richard H Shukle
- Crop Production and Pest Control Research Unit, USDA-ARS, Department of Entomology, Purdue University, West Lafayette, IN 47907, USA.
| | | | | | | |
Collapse
|
25
|
Montes MJ, Andrés MF, Sin E, López-Braña I, Martín-Sánchez JA, Romero MD, Delibes A. Cereal cyst nematode resistance conferred by the Cre7 gene from Aegilops triuncialis and its relationship with Cre genes from Australian wheat cultivars. Genome 2008; 51:315-9. [PMID: 18438434 DOI: 10.1139/g08-015] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Cereal cyst nematode (CCN; Heterodera avenae Woll.) is a root pathogen of cereal crops that can cause severe yield losses in wheat (Triticum aestivum). Differential host-nematode interactions occur in wheat cultivars carrying different CCN resistance (Cre) genes. The objective of this study was to determine the CCN resistance conferred by the Cre7 gene from Aegilops triuncialis in a 42-chromosome introgression line and to assess the effects of the Cre1, Cre3, Cre4, and Cre8 genes present in Australian wheat lines on Spanish pathotype Ha71. Inhibition of nematode reproduction was rank-ordered as Cre1 >or = Cre4 > or = Cre7 >> Cre8 > Cre3. Lines carrying Cre1, Cre4, or Cre7 exhibited a significantly higher level of resistance than those carrying Cre8 or Cre3. Allelism tests indicated that Cre7 segregated independently of Cre1 on chromosome 2BL and Cre4 on chromosome 2DL, and these genes could consistently be combined in the same genotype, inducing a more durable resistance. Tests to determine the chromosomal location of Cre7 using addition lines were inconclusive.
Collapse
Affiliation(s)
- M J Montes
- Departamento de Biotecnologia, ETS Ingenieros Agronomos, UPM, Madrid, Spain
| | | | | | | | | | | | | |
Collapse
|
26
|
Chen HF, Wang H, Li ZY. Production and genetic analysis of partial hybrids in intertribal crosses between Brassica species (B. rapa, B. napus) and Capsella bursa-pastoris. PLANT CELL REPORTS 2007; 26:1791-800. [PMID: 17569050 DOI: 10.1007/s00299-007-0392-x] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2007] [Revised: 05/21/2007] [Accepted: 05/23/2007] [Indexed: 05/15/2023]
Abstract
Capsella bursa-pastoris (L.) Medic (2n = 4x = 32) is a natural double-low (erucic acid < 1%, glucosinolates < 30 micromol/g) germplasm and shows high degree of resistance to Sclerotinia sclerotiorum. Hybridizations were carried out between two Brassica species viz. B. rapa (2n = 20) and B. napus (2n = 38) as female and C. bursa-pastoris as male parent to introduce these desirable traits into cultivated Brassica species. Majority of F(1) plants resembled female parents in morphology and only a few expressed some characters of male parent, including the white petals. Based on cytological observation of somatic cells, the F(1) plants were classified into five types: two types from the cross with B. rapa, type I had 2n = 27-29; type II had 2n = 20; three types from the crosses with B. napus, type III was haploids with 2n = 19; type IV had 2n = 29; type V had 2n = 38. One to two chromosomes of C. bursa-pastoris were detected in pollen mother cells (PMCs) of type I plant by genomic in situ hybridization (GISH), together with chromosomal segments in ovary cells and PMCs of some F1 plants. Amplified fragment length polymorphism (AFLP) bands specific for the male parent, novel for two parents and absent bands in Brassica parents were generated in majority of F1 plants, even in Brassica-types and haploids, indicating the introgressions at various levels from C. bursa-pastoris and genomic alterations following hybridization. Some Brassica-type progeny plants had reduced contents of erucic acid and glucosinolates associated with improved resistance to S. sclerotiorum. The cytological and molecular mechanisms behind these results are discussed.
Collapse
Affiliation(s)
- Hai-Feng Chen
- National Key Lab of Crop Genetic Improvement, National Center of Crop Molecular Breeding Technology, National Center of Oil Crop Improvement (Wuhan), Huazhong Agricultural University, Wuhan 430070, China
| | | | | |
Collapse
|
27
|
Zhao HX, Liu XM, Chen MS. H22, a major resistance gene to the Hessian fly (Mayetiola destructor), is mapped to the distal region of wheat chromosome 1DS. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2006; 113:1491-6. [PMID: 16972061 DOI: 10.1007/s00122-006-0396-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2006] [Accepted: 08/14/2006] [Indexed: 05/11/2023]
Abstract
H22 is a major resistance gene conferring high-level of antibiosis to Hessian fly [Mayetiola destructor (Say)] larvae. It was previously assigned to wheat chromosome 1D through monosomic analysis (Raupp et al. in J Hered 84:142-145, 1993). The objective of this study was to identify molecular markers that can be used for marker-assisted selection for wheat breeding, and to further map this gene toward map-based cloning. Forty-five simple sequence repeat (SSR) and sequence-tagged site (STS) markers specific to chromosome 1D were evaluated for linkage to H22 using a segregating population consisting of 192 F(2:3) families, which were derived from the cross Tugela-Dn1 x KS85WGRC01(H22). The STS Xhor2kv and SSR Xgdm33 are two flanking markers that are tightly linked to H22 at genetic distances of 0.3 and 1.0 cM, respectively. Five other SSR markers including Xgpw7082, Xwmc147, Xcfd15, Xwmc432 and Xwmc336 were also linked to H22 at the distance from 0.8 to 20.8 cM. Analysis of Chinese Spring (CS) deletion lines revealed that all the H22-linked markers are located distal to the breakpoint of del 1DS-5, indicating that the H22 gene is located at the distal 30% region on the short arm of wheat chromosome 1D. Genomic comparison suggested that the H22 gene is located in the same or similar chromosomal region as the leaf rust resistance genes Lr21 and Lr40 on 1DS, and orthologous to the H9 gene cluster of 1AS.
Collapse
Affiliation(s)
- H X Zhao
- Department of Entomology, Kansas State University, Manhattan, KS 66506, USA
| | | | | |
Collapse
|
28
|
Li JZ, Huang XQ, Heinrichs F, Ganal MW, Röder MS. Analysis of QTLs for yield components, agronomic traits, and disease resistance in an advanced backcross population of spring barley. Genome 2006; 49:454-66. [PMID: 16767170 DOI: 10.1139/g05-128] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Hordeum vulgare subsp. spontaneum, the wild progenitor of barley, is a potential source of useful genetic variation for barley breeding programs. The objective of this study was to map quantitative trait loci (QTLs) in an advanced backcross population of barley. A total of 207 BC3 lines were developed using the 2-rowed German spring cultivar Hordeum vulgare subsp. vulgare 'Brenda' as a recurrent parent and the H. vulgare subsp. spontaneum accession HS584 as a donor parent. The lines were genotyped by 108 simple-sequence repeat (SSR) markers and evaluated in field tests for the measurement of grain yield and its components, such as ear length, spikelet number per spike, grain number per spike, spike number, and 1000-grain mass, as well as heading date and plant height. A total of 100 QTLs were detected. Ten QTLs with increasing effects were found for ear length, spikelet number, and grain number per spike. Three QTLs contributed by HS584 were found to significantly decrease days to heading across all years at 2 locations. In addition, 2 QTLs from HS584 on chromosomes 2H and 3H were associated with resistance to leaf rust. Based on genotypic data obtained from this population, 55 introgression lines carrying 1 or 2 donor segments were selected to develop a set of doubled-haploid lines, which will be used to reconfirm and investigate the effects of 100 QTLs for future genetic studies.
Collapse
Affiliation(s)
- J Z Li
- Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany
| | | | | | | | | |
Collapse
|
29
|
Chen MS, Fellers JP, Zhu YC, Stuart JJ, Hulbert S, El-Bouhssini M, Liu X. A super-family of genes coding for secreted salivary gland proteins from the Hessian fly, Mayetiola destructor. JOURNAL OF INSECT SCIENCE (ONLINE) 2006; 6:1-13. [PMID: 19537963 PMCID: PMC2990301 DOI: 10.1673/2006.06.12.1] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2005] [Accepted: 12/07/2005] [Indexed: 05/11/2023]
Abstract
We have previously characterized a gene coding for the secreted-salivary-gland-protein 11A1 (SSGP-11A1) from the Hessian fly, Mayetiola destructor (Say) (Diptera Cecidomyiidae). Here we report the cloning and characterization of three new genes coding for proteins designated SSGP-11B1, SSGP-11C1, and SSGP-11C2, and their relationship with the SSGP-11A1-encoding gene. Based on their structural conservation, similar regulation, and clustered genomic organization, we conclude that the four genes represent a gene superfamily, designated SSGP-11, which originated from a common ancestor. Cloning, Southern blot and in situ hybridization data suggest that each of theSSGP-11 families has multiple members that cluster within short chromosome regions. The presence of a secretion signal peptide, the exclusive expression in the larval stage, and the clustered genomic organization indicate that this superfamily might be important for Hessian fly virulence/avirulence.
Collapse
Affiliation(s)
- Ming-Shun Chen
- USDA-ARS, Plant Science and Entomology Research Unit, 4007 Throckmorton Hall, Manhattan, KS 66506
- Department of Entomology, 123 Waters Hall, Kansas State University, Manhattan, KS 66506
| | - John P. Fellers
- USDA-ARS, Plant Science and Entomology Research Unit, 4007 Throckmorton Hall, Manhattan, KS 66506
- Department of Plant Pathology, 4027 Throckmorton Hall, Kansas State University, Manhattan, KS 66506
| | - Yu Cheng Zhu
- USDA-ARS-JWDSRC, PO Box 346/141 Exp Stn Rd, Stoneville, MS 38776
| | - Jeffrey J. Stuart
- Department of Entomology, Purdue University, West Lafayette, Indiana 47907
| | - Scot Hulbert
- Department of Plant Pathology, 4027 Throckmorton Hall, Kansas State University, Manhattan, KS 66506
| | | | - Xiang Liu
- Department of Entomology, 123 Waters Hall, Kansas State University, Manhattan, KS 66506
| |
Collapse
|
30
|
Liu XM, Brown-Guedira GL, Hatchett JH, Owuoche JO, Chen MS. Genetic characterization and molecular mapping of a Hessian fly-resistance gene transferred from T. turgidum ssp. dicoccum to common wheat. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2005; 111:1308-15. [PMID: 16136351 DOI: 10.1007/s00122-005-0059-3] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2004] [Accepted: 07/14/2005] [Indexed: 05/03/2023]
Abstract
A gene (temporarily designated Hdic) conferring resistance to the Hessian fly (Hf) [Mayetiola destructor (Say)] was previously identified from an accession of German cultivated emmer wheat [Triticum turgidum ssp. dicoccum (Schrank ex Schübler) Thell] PI 94641, and was transferred to the Hf-resistant wheat germplasm KS99WGRC42. The inheritance of Hdic resistance exhibited incomplete penetrance because phenotypes of some heterozygous progenies are fully resistant and the others are fully susceptible. Five simple sequence repeat (SSR) markers (Xgwm136,Xcfa2153, Xpsp2999,Xgwm33, and Xbarc263) were linked to the Hdic gene on the short arm of wheat chromosome 1A in the same region as the H9, H10, and H11 loci. Flanking markers Xgwm33 and Xcfa2153 were mapped at distances 0.6 cM proximal and 1.4 cM distal, respectively. Marker analysis revealed that a very small intercalary chromosomal segment containing Hdic was transferred from emmer wheat to KS99WGRC42. This is the first emmer-derived Hf-resistance gene that has been mapped and characterized. The Hdic gene confers a high level of antibiosis to biotypes GP and L, as well as to strains vH9 and vH13 of the Hf, which is different from the biotype reaction patterns of the known Hf-resistance genes on chromosome 1A (H5 and H11 susceptible to biotype L, H9 and H10 susceptible to strain vH9). These results suggested that Hdic is either a new gene or a novel allele of a known H gene on chromosome 1A. The broad spectrum of resistance conferred by the Hdic gene makes it valuable for developing Hf resistant wheat cultivars.
Collapse
Affiliation(s)
- X M Liu
- Department of Entomology, Kansas State University, Manhattan, KS 66506, USA
| | | | | | | | | |
Collapse
|
31
|
Mittapalli O, Neal JJ, Shukle RH. Differential expression of two cytochrome P450 genes in compatible and incompatible Hessian fly/wheat interactions. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY 2005; 35:981-9. [PMID: 15978999 DOI: 10.1016/j.ibmb.2005.03.011] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2005] [Revised: 03/31/2005] [Accepted: 03/31/2005] [Indexed: 05/03/2023]
Abstract
We have recovered two Hessian fly cytochrome P450 cDNAs from an ongoing midgut EST project. CYP6AZ1 and CYP6BA1 represent two new subfamilies within the CYP6 family. The deduced amino acid sequences for CYP6AZ1 and CYP6BA1 show conserved structural and functional domains of insect P450s. Expression analysis with reverse transcription-polymerase chain reaction (RT-PCR) indicated that CYP6AZ1 is midgut specific and induced during active larval feeding, whereas CYP6BA1 was expressed in all tissues and developmental stages examined. Further expression analysis of CYP6AZ1 with RT-PCR in compatible and incompatible Hessian fly/wheat interactions suggested that CYP6AZ1 may be required for larval feeding in compatible interactions. These results should lead to a better understanding of the Hessian fly/wheat interaction with emphasis on the larval midgut as a critical interface with its host plant.
Collapse
|
32
|
Weissmann S, Feldman M, Gressel J. Sequence evidence for sporadic intergeneric DNA introgression from wheat into a wild Aegilops species. Mol Biol Evol 2005; 22:2055-62. [PMID: 15972848 DOI: 10.1093/molbev/msi196] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Introgressive hybridization has played a crucial role in the evolution of many plant species, especially polyploids. The duplicated genetic material and wide geographical distribution facilitate hybridization and introgression among polyploid species having either homologous or homoeologous genomes. Such introgression may lead to the production of recombinant genomes that are more difficult to form at the diploid level. Crop genes that have introgressed into wild relatives can increase the capability of the wild relatives to adapt to agricultural environments and compete with crops or to compete with other wild species. Although the transfer of genes from crops into their conspecific immediate wild progenitors has been reported, little is known about spontaneous gene movement from crops to more distantly related species. We describe recent spontaneous DNA introgression from domesticated polyploid wheat into distantly related, wild tetraploid Aegilops peregrina (syn. Aegilops variabilis) and the stabilization of this sequence in wild populations despite not having homologous chromosomes. Our results show that DNA can spontaneously introgress between homoeologous genomes of species of the tribe Triticeae and, in the case of crop-wild relatives, possibly enrich the wild population. These results also emphasize the need for fail-safe mechanisms in transgenic crops to prevent gene flow where there may be ecological risks.
Collapse
Affiliation(s)
- Sarit Weissmann
- Department of Plant Sciences, The Weizmann Institute of Science, Rehovot, Israel
| | | | | |
Collapse
|
33
|
Mittapalli O, Stuart JJ, Shukle RH. Molecular cloning and characterization of two digestive serine proteases from the Hessian fly, Mayetiola destructor. INSECT MOLECULAR BIOLOGY 2005; 14:309-18. [PMID: 15926900 DOI: 10.1111/j.1365-2583.2005.00561.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Full-length cDNA and genomic sequences for two genes (designated mdesprot-I and mdesprot-II) encoding digestive serine proteases in Hessian fly, Mayetiola destructor, have been cloned and characterized. The deduced amino acid sequences revealed similarity with trypsin-like digestive serine proteases from other Dipterans. Both mdesprot-I and mdesprot-II encoded proteins with secretion signal peptides at the N-terminals, indicating the proteins are secreted proteases that should function as midgut digestive proteases. A cytological analysis with fluorescent in situ hybridization revealed the cytological localization of mdesprot-I and mdesprot-II on the long arm of Autosome 2. Results are discussed in the context of the efficacy of potential protease inhibitors to develop Hessian fly resistant wheat through genetic engineering approaches.
Collapse
Affiliation(s)
- O Mittapalli
- Department of Entomology, Purdue University, West Lafayette, IN 47906, USA
| | | | | |
Collapse
|
34
|
Behura SK, Valicente FH, Rider SD, Shun-Chen M, Jackson S, Stuart JJ. A physically anchored genetic map and linkage to avirulence reveals recombination suppression over the proximal region of Hessian fly chromosome A2. Genetics 2005; 167:343-55. [PMID: 15166159 PMCID: PMC1470865 DOI: 10.1534/genetics.167.1.343] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Resistance in wheat (Triticum aestivum) to the Hessian fly (Mayetiola destructor), a major insect pest of wheat, is based on a gene-for-gene interaction. Close linkage (3 +/- 2 cM) was discovered between Hessian fly avirulence genes vH3 and vH5. Bulked segregant analysis revealed two DNA markers (28-178 and 23-201) within 10 cM of these loci and only 3 +/- 2 cM apart. However, 28-178 was located in the middle of the short arm of Hessian fly chromosome A2 whereas 23-201 was located in the middle of the long arm of chromosome A2, suggesting the presence of severe recombination suppression over its proximal region. To further test that possibility, an AFLP-based genetic map of the Hessian fly genome was constructed. Fluorescence in situ hybridization of 20 markers on the genetic map to the polytene chromosomes of the Hessian fly indicated good correspondence between the linkage groups and the four Hessian fly chromosomes. The physically anchored genetic map is the first of any gall midge species. The proximal region of mitotic chromosome A2 makes up 30% of its length but corresponded to <3% of the chromosome A2 genetic map.
Collapse
Affiliation(s)
- Susanta K Behura
- Department of Entomology, Purdue University, West Lafayette, Indiana 47907, USA
| | | | | | | | | | | |
Collapse
|
35
|
Montes MJ, López-Braña I, Delibes A. Root enzyme activities associated with resistance to Heterodera avenae conferred by gene Cre7 in a wheat/Aegilops triuncialis introgression line. JOURNAL OF PLANT PHYSIOLOGY 2004; 161:493-495. [PMID: 15128038 DOI: 10.1078/0176-1617-01165] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
The effect of Cereal cyst nematode (Heterodera avenae) infection on the expression of putative root defence-related enzymes, peroxidase (PER), esterase (EST) and superoxide dismutase (SOD), was studied in roots of a wheat/Aegilops triuncialis introgression line TR-3531 carrying the Cre7 resistance gene. We analysed detoxificant isozyme changes within roots of the resistant line and their susceptible parent (H-10-15) as a control, during the early interaction with the pathotype Ha71 of H. avenae. Isoelectrofocusing (IEF) isozyme analysis, four and seven days after infection, revealed that PER, EST and SOD activities increased in the resistant line TR-3531 in comparison with the susceptible control. Moreover, four and seven days after infection, the TR-3531 line showed the expression of new PER isozymes, with pIs of 9.7, 9.0, 8.5, 6.5 and 5.0, and an increased activity of some constitutive isoforms. The intensity of some EST and SOD constitutive bands increased in the resistant line after infection. However, no new isoforms were detected for EST and SOD systems. Nematode-induced enzyme activity was minor (PER) or did not occur (EST and SOD) in the compatible interaction with H-10-15. The enhanced peroxidase and esterase activities may play a role in the lignification of cell walls, which assists in the resistance to penetration by the nematode.
Collapse
Affiliation(s)
- María Jesús Montes
- Departamento de Biotecnología, ETS Ing Agrónomos, UPM, Ciudad Universitaria s/n, Madrid, E-28040, Spain
| | | | | |
Collapse
|
36
|
Liu X, Fellers JP, Wilde GE, Stuart JJ, Chen MS. Characterization of two genes expressed in the salivary glands of the Hessian fly, Mayetiola destructor (Say). INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY 2004; 34:229-237. [PMID: 14871619 DOI: 10.1016/j.ibmb.2003.10.008] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2003] [Revised: 10/28/2003] [Accepted: 10/28/2003] [Indexed: 05/24/2023]
Abstract
Two genes, SSGP-11A1 and SSGP-12A1, have been isolated that encodes proteins with a secretion signal peptide at theN-terminals from the Hessian fly (Mayetiola destructor (Say)). The SSGP-11A1 gene contains one small intron (89 bp) and encodes a putative protein with 79 amino acids. The first 18 amino acids constitute a putative secretion signal peptide. The SSGP-12A1 gene contains three small introns and encodes a putative protein with 234 amino acids. The first 19 amino acids constitute a putative secretion signal peptide. Northern blot analysis revealed that both of the genes are primarily expressed in the salivary glands of Hessian fly larvae, the feeding stage of the insect. These observations are consistent with the possibility that the proteins encoded by them are secreted into host plants during feeding. Even though both genes are exclusively expressed in Hessian fly larvae, the expression profiles between them were quite different in insects at different instars. The SSGP-11A1 gene was expressed in all instars of larvae while the SSGP-12A1 gene was almost exclusively expressed in the first instar larvae. The differential expression suggests that the proteins encoded by these two genes may perform different functions. In situ hybridization revealed that the SSGP-11A1 gene is located on the short arm of chromosome A1 while SSGP-12A1 gene is on the long arm of chromosome A2.
Collapse
Affiliation(s)
- Xuming Liu
- Department of Entomology, Kansas State University, 123 Waters Hall, Manhattan, KS 66506, USA
| | | | | | | | | |
Collapse
|