Local lateral connectivity of inhibitory clutch cells in layer 4 of cat visual cortex (area 17)

Self-organization of modular activity in immature cortical networks

During development, cortical activity is organized into distributed modular patterns that are a precursor of the mature columnar functional architecture. Theoretically, such structured neural activity can emerge dynamically from local synaptic interactions through a recurrent network with effective local excitation with lateral inhibition (LE/LI) connectivity. Utilizing simultaneous widefield calcium imaging and optogenetics in juvenile ferret cortex prior to eye opening, we directly test several critical predictions of an LE/LI mechanism. We show that cortical networks transform uniform stimulations into diverse modular patterns exhibiting a characteristic spatial wavelength. Moreover, patterned optogenetic stimulation matching this wavelength selectively biases evoked activity patterns, while stimulation with varying wavelengths transforms activity towards this characteristic wavelength, revealing a dynamic compromise between input drive and the network's intrinsic tendency to organize activity. Furthermore, the structure of early spontaneous cortical activity - which is reflected in the developing representations of visual orientation - strongly overlaps that of uniform opto-evoked activity, suggesting a common underlying mechanism as a basis for the formation of orderly columnar maps underlying sensory representations in the brain.

Activation and depression of neural and hemodynamic responses induced by the intracortical microstimulation and visual stimulation in the mouse visual cortex

Objective. Intracortical microstimulation (ICMS) can be an effective method for restoring sensory perception in contemporary brain-machine interfaces. However, the mechanisms underlying better control of neuronal responses remain poorly understood, as well as the relationship between neuronal activity and other concomitant phenomena occurring around the stimulation site.Approach. Different microstimulation frequencies were investigatedin vivoon Thy1-GCaMP6s mice using widefield and two-photon imaging to evaluate the evoked excitatory neural responses across multiple spatial scales as well as the induced hemodynamic responses. Specifically, we quantified stimulation-induced neuronal activation and depression in the mouse visual cortex and measured hemodynamic oxyhemoglobin and deoxyhemoglobin signals using mesoscopic-scale widefield imaging.Main results. Our calcium imaging findings revealed a preference for lower-frequency stimulation in driving stronger neuronal activation. A depressive response following the neural activation preferred a slightly higher frequency stimulation compared to the activation. Hemodynamic signals exhibited a comparable spatial spread to neural calcium signals. Oxyhemoglobin concentration around the stimulation site remained elevated during the post-activation (depression) period. Somatic and neuropil calcium responses measured by two-photon microscopy showed similar dependence on stimulation parameters, although the magnitudes measured in soma was greater than in neuropil. Furthermore, higher-frequency stimulation induced a more pronounced activation in soma compared to neuropil, while depression was predominantly induced in soma irrespective of stimulation frequencies.Significance. These results suggest that the mechanism underlying depression differs from activation, requiring ample oxygen supply, and affecting neurons. Our findings provide a novel understanding of evoked excitatory neuronal activity induced by ICMS and offer insights into neuro-devices that utilize both activation and depression phenomena to achieve desired neural responses.

Self-organization of modular activity in immature cortical networks

During development, cortical activity is organized into distributed modular patterns that are a precursor of the mature columnar functional architecture. Theoretically, such structured neural activity can emerge dynamically from local synaptic interactions through a recurrent network with effective local excitation with lateral inhibition (LE/LI) connectivity. Utilizing simultaneous widefield calcium imaging and optogenetics in juvenile ferret cortex prior to eye opening, we directly test several critical predictions of an LE/LI mechanism. We show that cortical networks transform uniform stimulations into diverse modular patterns exhibiting a characteristic spatial wavelength. Moreover, patterned optogenetic stimulation matching this wavelength selectively biases evoked activity patterns, while stimulation with varying wavelengths transforms activity towards this characteristic wavelength, revealing a dynamic compromise between input drive and the network's intrinsic tendency to organize activity. Furthermore, the structure of early spontaneous cortical activity - which is reflected in the developing representations of visual orientation - strongly overlaps that of uniform opto-evoked activity, suggesting a common underlying mechanism as a basis for the formation of orderly columnar maps underlying sensory representations in the brain.

Activation and depression of neural and hemodynamic responses induced by the intracortical microstimulation and visual stimulation in the mouse visual cortex

Objective . Intracortical microstimulation can be an effective method for restoring sensory perception in contemporary brain-machine interfaces. However, the mechanisms underlying better control of neuronal responses remain poorly understood, as well as the relationship between neuronal activity and other concomitant phenomena occurring around the stimulation site. Approach . Different microstimulation frequencies were investigated in vivo on Thy1-GCaMP6s mice using widefield and two-photon imaging to evaluate the evoked excitatory neural responses across multiple spatial scales as well as the induced hemodynamic responses. Specifically, we quantified stimulation-induced neuronal activation and depression in the mouse visual cortex and measured hemodynamic oxyhemoglobin and deoxyhemoglobin signals using mesoscopic-scale widefield imaging. Main results . Our calcium imaging findings revealed a preference for lower-frequency stimulation in driving stronger neuronal activation. A depressive response following the neural activation preferred a slightly higher frequency stimulation compared to the activation. Hemodynamic signals exhibited a comparable spatial spread to neural calcium signals. Oxyhemoglobin concentration around the stimulation site remained elevated during the post-activation (depression) period. Somatic and neuropil calcium responses measured by two-photon microscopy showed similar dependence on stimulation parameters, although the magnitudes measured in soma was greater than in neuropil. Furthermore, higher-frequency stimulation induced a more pronounced activation in soma compared to neuropil, while depression was predominantly induced in soma irrespective of stimulation frequencies. Significance . These results suggest that the mechanism underlying depression differs from activation, requiring ample oxygen supply, and affecting neurons. Our findings provide a novel understanding of evoked excitatory neuronal activity induced by intracortical microstimulation and offer insights into neuro-devices that utilize both activation and depression phenomena to achieve desired neural responses.

Computational Modeling of Information Propagation during the Sleep–Waking Cycle

Simple Summary

During the deep phases of sleep we do not normally wake up by a thunder, but we nevertheless notice it when awake. The exact same sound gets to our ears and cortex through the thalamus and still, it triggers two very different responses. There is growing experimental evidence that these two states of the brain—sleep and wakefulness—distribute sensory information in different ways across the cortex. In particular, during sleep, neuronal responses remain local and do not spread out across distant synaptically connected regions. On the contrary, during wakefulness, stimuli are able to elicit a wider spatial response. We have used a computational model of coupled cortical columns to study how these two propagation modes arise. Moreover, the transition from sleep-like to waking-like dynamics occurs in agreement with the synaptic homeostasis hypothesis and only requires the increase of excitatory conductances. We have found that, in order to reproduce the aforementioned observations, this parameter change has to be selectively applied: synaptic conductances between distinct columns have to be potentiated over local ones.

Abstract

Non-threatening familiar sounds can go unnoticed during sleep despite the fact that they enter our brain by exciting the auditory nerves. Extracellular cortical recordings in the primary auditory cortex of rodents show that an increase in firing rate in response to pure tones during deep phases of sleep is comparable to those evoked during wakefulness. This result challenges the hypothesis that during sleep cortical responses are weakened through thalamic gating. An alternative explanation comes from the observation that the spatiotemporal spread of the evoked activity by transcranial magnetic stimulation in humans is reduced during non-rapid eye movement (NREM) sleep as compared to the wider propagation to other cortical regions during wakefulness. Thus, cortical responses during NREM sleep remain local and the stimulus only reaches nearby neuronal populations. We aim at understanding how this behavior emerges in the brain as it spontaneously shifts between NREM sleep and wakefulness. To do so, we have used a computational neural-mass model to reproduce the dynamics of the sensory auditory cortex and corresponding local field potentials in these two brain states. Following the synaptic homeostasis hypothesis, an increase in a single parameter, namely the excitatory conductance g¯AMPA, allows us to place the model from NREM sleep into wakefulness. In agreement with the experimental results, the endogenous dynamics during NREM sleep produces a comparable, even higher, response to excitatory inputs to the ones during wakefulness. We have extended the model to two bidirectionally connected cortical columns and have quantified the propagation of an excitatory input as a function of their coupling. We have found that the general increase in all conductances of the cortical excitatory synapses that drive the system from NREM sleep to wakefulness does not boost the effective connectivity between cortical columns. Instead, it is the inter-/intra-conductance ratio of cortical excitatory synapses that should raise to facilitate information propagation across the brain.

Assessment of optogenetically-driven strategies for prosthetic restoration of cortical vision in large-scale neural simulation of V1

The neural encoding of visual features in primary visual cortex (V1) is well understood, with strong correlates to low-level perception, making V1 a strong candidate for vision restoration through neuroprosthetics. However, the functional relevance of neural dynamics evoked through external stimulation directly imposed at the cortical level is poorly understood. Furthermore, protocols for designing cortical stimulation patterns that would induce a naturalistic perception of the encoded stimuli have not yet been established. Here, we demonstrate a proof of concept by solving these issues through a computational model, combining (1) a large-scale spiking neural network model of cat V1 and (2) a virtual prosthetic system transcoding the visual input into tailored light-stimulation patterns which drive in situ the optogenetically modified cortical tissue. Using such virtual experiments, we design a protocol for translating simple Fourier contrasted stimuli (gratings) into activation patterns of the optogenetic matrix stimulator. We then quantify the relationship between spatial configuration of the imposed light pattern and the induced cortical activity. Our simulations in the absence of visual drive (simulated blindness) show that optogenetic stimulation with a spatial resolution as low as 100 [Formula: see text]m, and light intensity as weak as [Formula: see text] photons/s/cm[Formula: see text] is sufficient to evoke activity patterns in V1 close to those evoked by normal vision.

Independent Low-Rank Matrix Analysis-Based Automatic Artifact Reduction Technique Applied to Three BCI Paradigms

Electroencephalogram (EEG)-based brain-computer interfaces (BCIs) can potentially enable people to non-invasively and directly communicate with others using brain activities. Artifacts generated from body activities (e.g., eyeblinks and teeth clenches) often contaminate EEGs and make EEG-based classification/identification hard. Although independent component analysis (ICA) is the gold-standard technique for attenuating the effects of such contamination, the estimated independent components are still mixed with artifactual and neuronal information because ICA relies only on the independence assumption. The same problem occurs when using independent vector analysis (IVA), an extended ICA method. To solve this problem, we designed an independent low-rank matrix analysis (ILRMA)-based automatic artifact reduction technique that clearly models sources from observations under the independence assumption and a low-rank nature in the frequency domain. For automatic artifact reduction, we combined the signal separation technique with an independent component classifier for EEGs named ICLabel. To assess the comparative efficiency of the proposed method, the discriminabilities of artifact-reduced EEGs using ICA, IVA, and ILRMA were determined using an open-access EEG dataset named OpenBMI, which contains EEG data obtained through three BCI paradigms [motor-imagery (MI), event-related potential (ERP), and steady-state visual evoked potential (SSVEP)]. BCI performances were obtained using these three paradigms after applying artifact reduction techniques, and the results suggested that our proposed method has the potential to achieve higher discriminability than ICA and IVA for BCIs. In addition, artifact reduction using the ILRMA approach clearly improved (by over 70%) the averaged BCI performances using artifact-reduced data sufficiently for most needs of the BCI community. The extension of ICA families to supervised separation that leaves the discriminative ability would further improve the usability of BCIs for real-life environments in which artifacts frequently contaminate EEGs.

V4 shape features for contour representation and object detection

Cortical area V4 lies in the middle of the visual pathway involved with object recognition. Neurons in V4 selectively respond to different curve fragments along the object contour. In this paper, we propose a computational model that captures the shape features extracted by V4 neurons. The computational model emulated the information processing mechanism in the visual cortex. It extracted curve segments that V4 neurons respond to and quantitatively represented features of the curve segments. The proposed V4 shape features could describe object contours accurately and efficiently. With quantitative evaluation using the MPEG7 shape dataset, we showed that complex shapes could be represented with a very limited number of V4 shape features. Based on V4 features, we further developed a self-organizing map neural network to learn object shape models. The shape model was defined by a group of V4 features with constraints on their spatial relationships. The model was evaluated in object detection experiments using ETHZ objects and INRIA horses datasets. The proposed model could learn to recognize objects by shapes and accurately outline the object contour in the images. Thus, this model provides insight into the neural mechanisms of shape-based object recognition.

Rapid Long-Range Disynaptic Inhibition Explains the Formation of Cortical Orientation Maps

Competitive interactions are believed to underlie many types of cortical processing, ranging from memory formation, attention and development of cortical functional organization (e.g., development of orientation maps in primary visual cortex). In the latter case, the competitive interactions happen along the cortical surface, with local populations of neurons reinforcing each other, while competing with those displaced more distally. This specific configuration of lateral interactions is however in stark contrast with the known properties of the anatomical substrate, i.e., excitatory connections (mediating reinforcement) having longer reach than inhibitory ones (mediating competition). No satisfactory biologically plausible resolution of this conflict between anatomical measures, and assumed cortical function has been proposed. Recently a specific pattern of delays between different types of neurons in cat cortex has been discovered, where direct mono-synaptic excitation has approximately the same delay, as the combined delays of the disynaptic inhibitory interactions between excitatory neurons (i.e., the sum of delays from excitatory to inhibitory and from inhibitory to excitatory neurons). Here we show that this specific pattern of delays represents a biologically plausible explanation for how short-range inhibition can support competitive interactions that underlie the development of orientation maps in primary visual cortex. We demonstrate this statement analytically under simplifying conditions, and subsequently show using network simulations that development of orientation maps is preserved when long-range excitation, direct inhibitory to inhibitory interactions, and moderate inequality in the delays between excitatory and inhibitory pathways is added.

A modeler's view on the spatial structure of intrinsic horizontal connectivity in the neocortex

Most current computational models of neocortical networks assume a homogeneous and isotropic arrangement of local synaptic couplings between neurons. Sparse, recurrent connectivity is typically implemented with simple statistical wiring rules. For spatially extended networks, however, such random graph models are inadequate because they ignore the traits of neuron geometry, most notably various distance dependent features of horizontal connectivity. It is to be expected that such non-random structural attributes have a great impact, both on the spatio-temporal activity dynamics and on the biological function of neocortical networks. Here we review the neuroanatomical literature describing long-range horizontal connectivity in the neocortex over distances of up to eight millimeters, in various cortical areas and mammalian species. We extract the main common features from these data to allow for improved models of large-scale cortical networks. Such models include, next to short-range neighborhood coupling, also long-range patchy connections. We show that despite the large variability in published neuroanatomical data it is reasonable to design a generic model which generalizes over different cortical areas and mammalian species. Later on, we critically discuss this generalization, and we describe some examples of how to specify the model in order to adapt it to specific properties of particular cortical areas or species.

Receptive Field Self-Organization in a Model of the Fine Structure in V1 Cortical Columns

We study a dynamical model of processing and learning in the visual cortex, which reflects the anatomy of V1 cortical columns and properties of their neuronal receptive fields. Based on recent results on the fine-scale structure of columns in V1, we model the activity dynamics in subpopulations of excitatory neurons and their interaction with systems of inhibitory neurons. We find that a dynamical model based on these aspects of columnar anatomy can give rise to specific types of computations that result in self-organization of afferents to the column. For a given type of input, self-organization reliably extracts the basic input components represented by neuronal receptive fields. Self-organization is very noise tolerant and can robustly be applied to different types of input. To quantitatively analyze the system's component extraction capabilities, we use two standard benchmarks: the bars test and natural images. In the bars test, the system shows the highest noise robustness reported so far. If natural image patches are used as input, self-organization results in Gabor-like receptive fields. In quantitative comparison with in vivo measurements, we find that the obtained receptive fields capture statistical properties of V1 simple cells that algorithms such as independent component analysis or sparse coding do not reproduce.

Phase-dependent stimulation effects on bursting activity in a neural network cortical simulation

PURPOSE

A neural network simulation with realistic cortical architecture has been used to study synchronized bursting as a seizure representation. This model has the property that bursting epochs arise and cease spontaneously, and bursting epochs can be induced by external stimulation. We have used this simulation to study the time-frequency properties of the evolving bursting activity, as well as effects due to network stimulation.

METHODS

The model represents a cortical region of 1.6 mm x 1.6mm, and includes seven neuron classes organized by cortical layer, inhibitory or excitatory properties, and electrophysiological characteristics. There are a total of 65,536 modeled single compartment neurons that operate according to a version of Hodgkin-Huxley dynamics. The intercellular wiring is based on histological studies and our previous modeling efforts.

RESULTS

The bursting phase is characterized by a flat frequency spectrum. Stimulation pulses are applied to this modeled network, with an electric field provided by a 1mm radius circular electrode represented mathematically in the simulation. A phase dependence to the post-stimulation quiescence is demonstrated, with local relative maxima in efficacy occurring before or during the network depolarization phase in the underlying activity. Brief periods of network insensitivity to stimulation are also demonstrated. The phase dependence was irregular and did not reach statistical significance when averaged over the full 2.5s of simulated bursting investigated. This result provides comparison with previous in vivo studies which have also demonstrated increased efficacy of stimulation when pulses are applied at the peak of the local field potential during cortical after discharges. The network bursting is synchronous when comparing the different neuron classes represented up to an uncertainty of 10 ms. Studies performed with an excitatory chandelier cell component demonstrated increased synchronous bursting in the model, as predicted from experimental work.

CONCLUSIONS

This large-scale multi-neuron neural network simulation reproduces many aspects of evolving cortical bursting behavior as well as the timing-dependent effects of electrical stimulation on that bursting.

Electrocortical functional connectivity in infancy: response to body tilt

To test the hypothesis that infant cortical regions activated by a head-up tilt also exhibit increased functional electrocortical connectivity, prone sleeping newborn and 2- to 4-month-old infants were tilted head-up to 30 degrees. Electroencephalogram (EEG) data were collected with 128 electrodes and coherence calculated to quantify electrocortical synchrony. Local coherence, defined as the average of coherence measurements between the EEG at each electrode site and neighboring sites (approximately 1 cm electrode spacing), was found in activated cortical regions that had previously shown increased high-frequency power with tilt. Long-distance coherence was computed between the regions. Newborn infants had significant increases in local coherence in the activated left frontal, right frontal-temporal, and occipital cortical regions; long-distance coherence increased between the right frontal-temporal and occipital regions. In contrast, infants at 2 to 4 months old, the age of maximum risk for sudden infant death syndrome, had no significant changes in coherence. Newborn and 2- to 4-month-old infants thus have different electrocortical responses to a classic cardiovascular challenge.

Studies of stimulus parameters for seizure disruption using neural network simulations

A large scale neural network simulation with realistic cortical architecture has been undertaken to investigate the effects of external electrical stimulation on the propagation and evolution of ongoing seizure activity. This is an effort to explore the parameter space of stimulation variables to uncover promising avenues of research for this therapeutic modality. The model consists of an approximately 800 mum x 800 mum region of simulated cortex, and includes seven neuron classes organized by cortical layer, inhibitory or excitatory properties, and electrophysiological characteristics. The cell dynamics are governed by a modified version of the Hodgkin-Huxley equations in single compartment format. Axonal connections are patterned after histological data and published models of local cortical wiring. Stimulation induced action potentials take place at the axon initial segments, according to threshold requirements on the applied electric field distribution. Stimulation induced action potentials in horizontal axonal branches are also separately simulated. The calculations are performed on a 16 node distributed 32-bit processor system. Clear differences in seizure evolution are presented for stimulated versus the undisturbed rhythmic activity. Data is provided for frequency dependent stimulation effects demonstrating a plateau effect of stimulation efficacy as the applied frequency is increased from 60 to 200 Hz. Timing of the stimulation with respect to the underlying rhythmic activity demonstrates a phase dependent sensitivity. Electrode height and position effects are also presented. Using a dipole stimulation electrode arrangement, clear orientation effects of the dipole with respect to the model connectivity is also demonstrated. A sensitivity analysis of these results as a function of the stimulation threshold is also provided.

Anisotropy in the visual cortex investigated by neuronavigated transcranial magnetic stimulation

Responses to transcranial magnetic stimulation (TMS) of the motor cortex depend on the direction of the induced current with an optimum perpendicular to the orientation of the precentral gyrus. Little is known about anisotropy in other cortical regions. We measured phosphene thresholds in the visual cortex using a frameless neuronavigation system. Comparing horizontal and vertical current orientation as well as monophasic and biphasic pulses in 7 subjects, we found lower thresholds with biphasic pulses and a tendency for lower thresholds with horizontal currents. When varying current directions in steps of 45 degrees centered on a hot spot over the occipital cortex, in 10 out of 12 measurements optimal current orientation ran perpendicular to the underlying gyrus (mean deviation 14.6 degrees). Optimal current orientation was determined as the orientation of the second eigenvector from the covariance matrix of the stimulation sites that had been shifted along the respective current direction by the amount of the measured threshold. Individual cortical architecture was obtained by segmentation of a 3d anatomical MR scan, with large interindividual differences among the orientations of the stimulated gyrus. As with the motor system, the optimum threshold with biphasic pulses was flipped about 180 degrees compared to the optimum with monophasic pulses (p<.02) throughout subjects, suggesting both similar anisotropic properties of networks in the visual and motor cortices and the existence of anisotropic behaviour in any cortical region. As a consequence, optimal TMS application should always take into account the individual orientation of the gyrus to be stimulated.

Local potential connectivity in cat primary visual cortex

Time invariant description of synaptic connectivity in cortical circuits may be precluded by the ongoing growth and retraction of dendritic spines accompanied by the formation and elimination of synapses. On the other hand, the spatial arrangement of axonal and dendritic branches appears stable. This suggests that an invariant description of connectivity can be cast in terms of potential synapses, which are locations in the neuropil where an axon branch of one neuron is proximal to a dendritic branch of another neuron. In this paper, we attempt to reconstruct the potential connectivity in local cortical circuits of the cat primary visual cortex (V1). Based on multiple single-neuron reconstructions of axonal and dendritic arbors in 3 dimensions, we evaluate the expected number of potential synapses and the probability of potential connectivity among excitatory (pyramidal and spiny stellate) neurons and inhibitory basket cells. The results provide a quantitative description of structural organization of local cortical circuits. For excitatory neurons from different cortical layers, we compute local domains, which contain their potentially pre- and postsynaptic excitatory partners. These domains have columnar shapes with laminar specific radii and are roughly of the size of the ocular dominance column. Therefore, connections between most excitatory neurons in the ocular dominance column can be implemented by local synaptogenesis. Structural connectivity involving inhibitory basket cells is generally weaker than excitatory connectivity. Here, only nearby neurons are capable of establishing more than one potential synapse, implying that within the ocular dominance column these connections have more limited potential for circuit remodeling.

A Model for Perceptual Averaging and Stochastic Bistable Behavior and the Role of Voluntary Control

We combine population coding, winner-take-all competition, and differentiated inhibitory feedback to model the process by which information from different, continuously variable signals is integrated for perceptual awareness. We focus on “slant rivalry,” where binocular disparity is in conflict with monocular perspective in specifying surface slant. Using a robust single parameter set, our model successfully replicates three key experimental results: (1) transition from signal averaging to bistability with increasing signal conflict, (2) change in perceptual reversal rates as a function of signal conflict, and (3) a shift in the distribution of percept durations through voluntary control exertion. Voluntary control is implemented through the use of a single top-down bias input. The transition from signal averaging to bistability arises as a natural consequence of combining population coding and wide receptive fields, common to higher cortical areas. The model architecture does not contain any assumption that would limit it to this particular example of stimulus rivalry. An emergent physiological interpretation is that differentiated inhibitory feedback may play an important role for increasing percept stability without reducing sensitivity to large stimulus changes, which for bistable conditions leads to increased alternation rate as a function of signal conflict.

Imaging human EEG dynamics using independent component analysis

This review discusses the theory and practical application of independent component analysis (ICA) to multi-channel EEG data. We use examples from an audiovisual attention-shifting task performed by young and old subjects to illustrate the power of ICA to resolve subtle differences between evoked responses in the two age groups. Preliminary analysis of these data using ICA suggests a loss of task specificity in independent component (IC) processes in frontal and somatomotor cortex during post-response periods in older as compared to younger subjects, trends not detected during examination of scalp-channel event-related potential (ERP) averages. We discuss possible approaches to component clustering across subjects and new ways to visualize mean and trial-by-trial variations in the data, including ERP-image plots of dynamics within and across trials as well as plots of event-related spectral perturbations in component power, phase locking, and coherence. We believe that widespread application of these and related analysis methods should bring EEG once again to the forefront of brain imaging, merging its high time and frequency resolution with enhanced cm-scale spatial resolution of its cortical sources.

A Simple Hebbian/Anti-Hebbian Network Learns the Sparse, Independent Components of Natural Images

Slightly modified versions of an early Hebbian/anti-Hebbian neural network are shown to be capable of extracting the sparse, independent linear components of a prefiltered natural image set. An explanation for this capability in terms of a coupling between two hypothetical networks is presented. The simple networks presented here provide alternative, biologically plausible mechanisms for sparse, factorial coding in early primate vision.

Information-based modeling of event-related brain dynamics

We discuss the theory and practice of applying independent component analysis (ICA) to electroencephalographic (EEG) data. ICA blindly decomposes multi-channel EEG data into maximally independent component processes (ICs) that typically express either particularly brain generated EEG activities or some type of non-brain artifacts (line or other environmental noise, eye blinks and other eye movements, or scalp or heart muscle activity). Each brain and non-brain IC is identified with an activity time course (its 'activation') and a set of relative strengths of its projections (by volume conduction) to the recording electrodes (its 'scalp map'). Many non-articraft IC scalp maps strongly resemble the projection of a single dipole, allowing the location and orientation of the best-fitting equivalent dipole (or other source model) to be easily determined. In favorable circumstances, ICA decomposition of high-density scalp EEG data appears to allow concurrent monitoring, with high time resolution, of separate EEG activities in twenty or more separate cortical EEG source areas. We illustrate the differences between ICA and traditional approaches to EEG analysis by comparing time courses and mean event related spectral perturbations (ERSPs) of scalp channel and IC data. Comparing IC activities across subjects necessitates clustering of similar Ics based on common dynamic and/or spatial features. We discuss and illustrate such a component clustering strategy. In sum, continued application of ICA methods in EEG research should continue to yield new insights into the nature and role of the complex macroscopic cortical dynamics captured by scalp electrode recordings.

A phenomenological theory of spatially structured local synaptic connectivity

The structure of local synaptic circuits is the key to understanding cortical function and how neuronal functional modules such as cortical columns are formed. The central problem in deciphering cortical microcircuits is the quantification of synaptic connectivity between neuron pairs. I present a theoretical model that accounts for the axon and dendrite morphologies of pre- and postsynaptic cells and provides the average number of synaptic contacts formed between them as a function of their relative locations in three-dimensional space. An important aspect of the current approach is the representation of a complex structure of an axonal/dendritic arbor as a superposition of basic structures—synaptic clouds. Each cloud has three structural parameters that can be directly estimated from two-dimensional drawings of the underlying arbor. Using empirical data available in literature, I applied this theory to three morphologically different types of cell pairs. I found that, within a wide range of cell separations, the theory is in very good agreement with empirical data on (i) axonal–dendritic contacts of pyramidal cells and (ii) somatic synapses formed by the axons of inhibitory interneurons. Since for many types of neurons plane arborization drawings are available from literature, this theory can provide a practical means for quantitatively deriving local synaptic circuits based on the actual observed densities of specific types of neurons and their morphologies. It can also have significant implications for computational models of cortical networks by making it possible to wire up simulated neural networks in a realistic fashion.

Each neuron communicates signals via synaptic connections simultaneously to several hundreds of neighboring neurons forming a synaptic circuit. Determining the pattern of synaptic connections between local neurons is crucial for understanding a specific cortical function implemented by a synaptic circuit. The connectivity between a pair of neurons is affected by their axonal/dendritic morphologies and relative spatial locations. Although neuroscientists have precise tools to measure neuronal activity caused by the flow of signals between circuit neurons, there are still considerable difficulties in the direct experimental measurement of local synaptic connectivity, which actually determines the underlying activity. This paper presents a theoretical approach to synaptic connectivity accounting for the morphologies of pre- and postsynaptic neurons and providing the average number of synaptic contacts formed between them as a function of their relative locations. An important aspect is the decomposition of the complex structure of an axonal/dendritic arbor into a small number of basic structures. The theory is in very good agreement, within a wide range of cell separations, with empirical data on axonal–dendritic contacts of pyramidal cells and somatic synapses formed by the axons of inhibitory interneurons. The current approach can provide a practical means for quantitatively deriving local synaptic circuits based on the actual observed densities of specific types of neurons and their morphologies.

Controlling synaptic input patterns in vitro by dynamic photo stimulation

Recent experimental and theoretical work indicates that both the intensity and the temporal structure of synaptic activity strongly modulate the integrative properties of single neurons in the intact brain. However, studying these effects experimentally is complicated by the fact that, in experimental systems, network activity is either absent, as in the acute slice preparation, or difficult to monitor and to control, as in in vivo recordings. Here, we present a new implementation of neurotransmitter uncaging in acute brain slices that uses functional projections to generate tightly controlled, spatio-temporally structured synaptic input patterns in individual neurons. For that, a set of presynaptic neurons is activated in a precisely timed sequence through focal photolytic release of caged glutamate with the help of a fast laser scanning system. Integration of synaptic inputs can be studied in postsynaptic neurons that are not directly stimulated with the laser, but receive input from the targeted neurons through intact axonal projections. Our new approach of dynamic photo stimulation employs functional synapses, accounts for their spatial distribution on the dendrites, and thus allows study of the integrative properties of single neurons with physiologically realistic input. Data obtained with our new technique suggest that, not only the neuronal spike generator, but also synaptic transmission and dendritic integration in neocortical pyramidal cells, can be highly reliable.

Electrophysiological classes of neocortical neurons

Neocortical network behavior and neocortical function emerge from synaptic interactions among neurons with specific electrophysiological and morphological characteristics. The intrinsic electrophysiological properties of neurons define their firing patterns and their input-output functions with critical consequences for their functional properties within the network. Understanding the role played by the active non-linear properties caused by ionic conductances distributed in the soma and the dendrites is a critical step towards understanding cortical function. Here I present a brief description of electrophysiological and morphological characteristics of neocortical cells that allow their classification in categories. I review some examples of differences in functional properties among different electrophysiological cell classes in the visual cortex, as well as the role played by specific ionic conductances in defining firing and accommodation properties of neocortical neurons.

Rapid processing and unsupervised learning in a model of the cortical macrocolumn

We study a model of the cortical macrocolumn consisting of a collection of inhibitorily coupled minicolumns. The proposed system overcomes several severe deficits of systems based on single neurons as cerebral functional units, notably limited robustness to damage and unrealistically large computation time. Motivated by neuroanatomical and neurophysiological findings, the utilized dynamics is based on a simple model of a spiking neuron with refractory period, fixed random excitatory interconnection within minicolumns, and instantaneous inhibition within one macrocolumn. A stability analysis of the system's dynamical equations shows that minicolumns can act as monolithic functional units for purposes of critical, fast decisions and learning. Oscillating inhibition (in the gamma frequency range) leads to a phase-coupled population rate code and high sensitivity to small imbalances in minicolumn inputs. Minicolumns are shown to be able to organize their collective inputs without supervision by Hebbian plasticity into selective receptive field shapes, thereby becoming classifiers for input patterns. Using the bars test, we critically compare our system's performance with that of others and demonstrate its ability for distributed neural coding.

Disruption in the inhibitory architecture of the cell minicolumn: implications for autism

The modular arrangement of the neocortex is based on the cell minicolumn: a self-contained ecosystem of neurons and their afferent, efferent, and interneuronal connections. The authors' preliminary studies indicate that minicolumns in the brains of autistic patients are narrower, with an altered internal organization. More specifically, their minicolumns reveal less peripheral neuropil space and increased spacing among their constituent cells. The peripheral neuropil space of the minicolumn is the conduit, among other things, for inhibitory local circuit projections. A defect in these GABAergic fibers may correlate with the increased prevalence of seizures among autistic patients. This article expands on our initial findings by arguing for the specificity of GABAergic inhibition in the neocortex as being focused around its mini- and macrocolumnar organization. The authors conclude that GABAergic interneurons are vital to proper minicolumnar differentiation and signal processing (e.g., filtering capacity of the neocortex), thus providing a putative correlate to autistic symptomatology.

The minicolumn and evolution of the brain

The minicolumn is generally considered an elementary unit of the neocortex in all mammalian brains. This essential building block has been affected by changes in the circuitry of the cortex during evolution. Researchers believe that enlargement of the cortical surface occurs through the addition of minicolumns rather than of single neurons. Therefore, minicolumns integrate cortical encephalization with organization. Despite these insights, few studies have analyzed the morphometry of the minicolumn to detect subtle but important differences among the brains of diverse mammals. The notion that minicolumns are essentially unchanged across species is challenged by strong evidence to the contrary. Because they are subject to species-specific variation, they can be used as a way to study evolutionary changes. Unfortunately, comparative studies are marred by a lack of standardized techniques, tissue preparation, cortical regions, or anatomical feature studied. However, recent advances in methodology enable standardized, quantified comparisons of minicolumn morphology.

The minicolumn hypothesis in neuroscience

The minicolumn is a continuing source of research and debate more than half a century after it was identified as a component of brain organization. The minicolumn is a sophisticated local network that contains within it the elements for redundancy and plasticity. Although it is sometimes compared to subcortical nuclei, the design of the minicolumn is a distinctive form of module that has evolved specifically in the neocortex. It unites the horizontal and vertical components of cortex within the same cortical space. Minicolumns are often considered highly repetitive, even clone-like, units. However, they display considerable heterogeneity between areas and species, perhaps even within a given macrocolumn. Despite a growing recognition of the anatomical basis of the cortical minicolumn, as well as its physiological properties, the potential of the minicolumn has not been exploited in fields such as comparative neuroanatomy, abnormalities of the brain and mind, and evolution.