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Haider MN, O'Higgins L, O'Shea R, Archer L, Wall DM, Verma N, Rodero MDR, Mehmood MA, Murphy JD, Bose A. Selecting optimal algal strains for robust photosynthetic upgrading of biogas under temperate oceanic climates. Biotechnol Adv 2025; 82:108581. [PMID: 40258525 DOI: 10.1016/j.biotechadv.2025.108581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2024] [Revised: 03/20/2025] [Accepted: 04/14/2025] [Indexed: 04/23/2025]
Abstract
Biogas generated from anaerobic digestion can be upgraded to biomethane by photosynthetic biogas upgrading, using CO2 as a bioresource for algal (cyanobacteria and microalgae) cultivation. This allows the upgrading technology to offer economic and environmental benefits to conventional physiochemical upgrading techniques (which can be energy-intensive and costly) by co-generating biomethane with high-value biomass. However, a critical challenge in implementing this technology in temperate oceanic climatic conditions (as found in Japan, and the northwest coasts of Europe and of North America, with average temperatures ranging between 5 and 20 °C) is the selection of algal strains that must be capable of sustained growth under lower ambient temperatures. Accordingly, this paper investigated the selection of algae that met seven key criteria: optimal growth at high pH (9-11); at alkalinity of 1.5-2.5 g inorganic carbon per litre; operation at low temperature (5-20 °C); tolerance to high CO2 concentrations (above 20 %); capability for mixotrophic cultivation; ability to accumulate high-value metabolites such as photosynthetic pigments and bioactive fatty acids; and ease of harvesting. Of the twenty-six algal species assessed and ranked using a Pugh Matrix, Anabaena sp. and Phormidium sp. were assessed as the most favourable species, followed by Oscillatoria sp., Spirulina subsalsa, and Leptolyngbya sp. Adaptive laboratory evolution together with manipulation of abiotic factors could be effectively utilised to increase the efficiency and economic feasibility of the use of the selected strain in a photosynthetic biogas upgrading system, through improvement of growth and yield of high-value compounds.
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Affiliation(s)
- Muhammad Nabeel Haider
- MaREI Centre for energy, climate and marine, Environmental Research Institute, University College Cork, Cork T23 XE10, Ireland; School of Engineering and Architecture, University College Cork, Ireland
| | - Linda O'Higgins
- MaREI Centre for energy, climate and marine, Environmental Research Institute, University College Cork, Cork T23 XE10, Ireland
| | - Richard O'Shea
- MaREI Centre for energy, climate and marine, Environmental Research Institute, University College Cork, Cork T23 XE10, Ireland; School of Engineering and Architecture, University College Cork, Ireland
| | - Lorraine Archer
- Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, UK
| | - David M Wall
- MaREI Centre for energy, climate and marine, Environmental Research Institute, University College Cork, Cork T23 XE10, Ireland; School of Engineering and Architecture, University College Cork, Ireland
| | - Nikita Verma
- MaREI Centre for energy, climate and marine, Environmental Research Institute, University College Cork, Cork T23 XE10, Ireland; School of Engineering and Architecture, University College Cork, Ireland
| | - María Del Rosario Rodero
- Institute of Sustainable Processes, University of Valladolid, Dr. Mergelina s/n., Valladolid 47011, Spain
| | - Muhammad Aamer Mehmood
- Bioenergy Research Center, Department of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan
| | - Jerry D Murphy
- MaREI Centre for energy, climate and marine, Environmental Research Institute, University College Cork, Cork T23 XE10, Ireland; School of Engineering and Architecture, University College Cork, Ireland
| | - Archishman Bose
- MaREI Centre for energy, climate and marine, Environmental Research Institute, University College Cork, Cork T23 XE10, Ireland; School of Engineering and Architecture, University College Cork, Ireland.
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Paquette AJ, Vadlamani A, Demirkaya C, Strous M, De la Hoz Siegler H. Nutrient management and medium reuse for cultivation of a cyanobacterial consortium at high pH and alkalinity. Front Bioeng Biotechnol 2022; 10:942771. [PMID: 36032714 PMCID: PMC9402938 DOI: 10.3389/fbioe.2022.942771] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Accepted: 07/11/2022] [Indexed: 11/13/2022] Open
Abstract
Alkaliphilic cyanobacteria have gained significant interest due to their robustness, high productivity, and ability to convert CO2 into bioenergy and other high value products. Effective nutrient management, such as re-use of spent medium, will be essential to realize sustainable applications with minimal environmental impacts. In this study, we determined the solubility and uptake of nutrients by an alkaliphilic cyanobacterial consortium grown at high pH and alkalinity. Except for Mg, Ca, Co, and Fe, all nutrients are in fully soluble form. The cyanobacterial consortium grew well without any inhibition and an overall productivity of 0.15 g L−1 d−1 (AFDW) was achieved. Quantification of nutrient uptake during growth resulted in the empirical formula CH1.81N0.17O0.20P0.013S0.009 for the consortium biomass. We showed that spent medium can be reused for at least five growth/harvest cycles. After an adaptation period, the cyanobacterial consortium fully acclimatized to the spent medium, resulting in complete restoration of biomass productivity.
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Affiliation(s)
- Alexandre J. Paquette
- Department of Geoscience, University of Calgary, Calgary, AB, Canada
- *Correspondence: Alexandre J. Paquette,
| | | | - Cigdem Demirkaya
- Department of Chemical and Petroleum Engineering, University of Calgary, Calgary, AB, Canada
| | - Marc Strous
- Department of Geoscience, University of Calgary, Calgary, AB, Canada
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Shahid A, Usman M, Atta Z, Musharraf SG, Malik S, Elkamel A, Shahid M, Abdulhamid Alkhattabi N, Gull M, Mehmood MA. Impact of wastewater cultivation on pollutant removal, biomass production, metabolite biosynthesis, and carbon dioxide fixation of newly isolated cyanobacteria in a multiproduct biorefinery paradigm. BIORESOURCE TECHNOLOGY 2021; 333:125194. [PMID: 33910117 DOI: 10.1016/j.biortech.2021.125194] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 04/14/2021] [Accepted: 04/15/2021] [Indexed: 06/12/2023]
Abstract
The impact of wastewater cultivation was studied on pollutant removal, biomass production, and biosynthesis of high-value metabolites by newly isolated cyanobacteria namely Acaryochloris marina BERC03, Oscillatoria sp. BERC04, and Pleurocapsa sp. BERC06. During cultivation in urabn wastewater, its pH used to adjust from pH 8.0 to 11, offering contamination-free cultivation, and flotation-based easy harvesting. Besides, wastewater cultivation improved biomass production by 1.3-fold when compared to control along with 3.54-4.2 gL-1 of CO2 fixation, concomitantly removing suspended organic matter, total nitrogen, and phosphorus by 100%, 53%, and 88%, respectively. Biomass accumulated 26-36% carbohydrates, 15-28% proteins, 38-43% lipids, and 6.3-9.5% phycobilins, where phycobilin yield was improved by 1.6-fold when compared to control. Lipids extracted from the pigment-free biomass were trans-esterified to biodiesel where pigment extraction showed no negative impact on quality of the biodiesel. These strains demonstrated the potential to become feedstock of an integrated biorefinery using urban wastewater as low-cost growth media.
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Affiliation(s)
- Ayesha Shahid
- Bioenergy Research Center, Department of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan
| | - Muhammad Usman
- Bioenergy Research Center, Department of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan
| | - Zahida Atta
- Bioenergy Research Center, Department of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan
| | - Syed Ghulam Musharraf
- H.E.J. Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, Karachi 75270, Pakistan
| | - Sana Malik
- Bioenergy Research Center, Department of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan
| | - Ali Elkamel
- Department of Chemical Engineering, University of Waterloo, 200 University Avenue West Waterloo, ON, N2L 3G1, Canada
| | - Muhammad Shahid
- Bioenergy Research Center, Department of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan
| | | | - Munazza Gull
- Biochemistry Department, King Abdulaziz University, Jeddah 21551, Saudi Arabia
| | - Muhammad Aamer Mehmood
- School of Bioengineering, Sichuan University of Science and Engineering, Zigong, China; Bioenergy Research Center, Department of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan.
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Qu D, Miao X. Carbon flow conversion induces alkali resistance and lipid accumulation under alkaline conditions based on transcriptome analysis in Chlorella sp. BLD. CHEMOSPHERE 2021; 265:129046. [PMID: 33261840 DOI: 10.1016/j.chemosphere.2020.129046] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2020] [Revised: 11/12/2020] [Accepted: 11/17/2020] [Indexed: 06/12/2023]
Abstract
Alkaline environments are abundant globally and cause damage to most organisms, while some microalgae can grow well and accumulate lipids under those conditions. Here the mechanisms of alkali resistance and lipid accumulation in the alkaliphilic microalgae Chlorella sp. BLD were explored using physiological-biochemical and transcriptome analysis. When cultivated at alkaline pH, Chlorella sp. BLD exhibited good alkali-resistance ability and increased biomass (0.97 g L-1). The biochemical composition of Chlorella sp. BLD changed significantly (lipid content increased 39% and protein content decreased 19.5%) compared with pH 7.5. Through transcriptome analysis, we found that pathways related to carbon metabolism such as photosynthesis, glycolysis, and the TCA cycle were significantly regulated under alkaline conditions. Genes that encoding the key enzyme in carbon-related metabolism such as Rubisco, AMY, PK, ME, CS, ACAT, KAS, and DGAT were identified. Transcriptional regulation of these genes results in carbon flow switching from starch and protein to cell wall metabolism, organic acid synthetic and lipid accumulation in response to alkaline conditions. These results reveal the alkali resistance mechanism of Chlorella sp. BLD and provide a theoretical basis for microalgae oil production under alkaline conditions.
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Affiliation(s)
- Dehui Qu
- State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai, 200240, China; Joint International Research Laboratory of Metabolic & Developmental Sciences, Shanghai Jiao Tong University, Shanghai, 200240, China; Biomass Energy Research Center, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Xiaoling Miao
- State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai, 200240, China; Joint International Research Laboratory of Metabolic & Developmental Sciences, Shanghai Jiao Tong University, Shanghai, 200240, China; Biomass Energy Research Center, Shanghai Jiao Tong University, Shanghai, 200240, China.
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A Series of Data-Driven Hypotheses for Inferring Biogeochemical Conditions in Alkaline Lakes and Their Deposits Based on the Behavior of Mg and SiO2. MINERALS 2021. [DOI: 10.3390/min11020106] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Alkaline (pH > 8.5) lakes have been common features of Earth’s surface environments throughout its history and are currently among the most biologically productive environments on the planet. The chemistry of alkaline lakes favors the deposition of aluminum-poor magnesian clays (e.g., sepiolite, stevensite, and kerolite) whose chemistry and mineralogy may provide a useful record of the biogeochemistry of the lake waters from which they were precipitated. In this forward-looking review, we present six data-driven, testable hypotheses devoted to furthering our understanding of the biogeochemical conditions in paleolake waters based on the geochemical behavior of Mg and SiO2. In the development of these hypotheses, we bring together a compilation of modern lake water chemistry, recently published and new experimental data, and empirical, thermodynamic, and kinetic relationships developed from these data. We subdivide the hypotheses and supporting evidence into three categories: (1) interpreting paleolake chemistry from mineralogy; (2) interpreting the impact of diatoms on alkaline lake sedimentation; and (3) interpreting depositional mineralogy based on water chemistry. We demonstrate the need for further investigation by discussing evidence both for and against each hypothesis, which, in turn, highlights the gaps in our knowledge and the importance of furthering our understanding of the relevant geological and biological systems. The focused testing of these hypotheses against modern occurrences and the geologic record of alkaline lakes can have profound implications for the interpretation of the paleo-biogeochemistry and paleohabitability of these systems on Earth and beyond.
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Zhu C, Zhai X, Xi Y, Wang J, Kong F, Zhao Y, Chi Z. Efficient CO2 capture from the air for high microalgal biomass production by a bicarbonate Pool. J CO2 UTIL 2020. [DOI: 10.1016/j.jcou.2019.12.023] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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Carbon Mass Balance in Arthrospira platensis Culture with Medium Recycle and High CO2 Supply. APPLIED SCIENCES-BASEL 2019. [DOI: 10.3390/app10010228] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
Medium recycling combined with CO2 recovery helps sustainable use of the alkaline medium in Arthrospira culture. However, high CO2 supply may cause inorganic carbon accumulation and pH reduction, which could result in low CO2 recovery and reduced algal growth. This study aimed to elucidate the effect of medium recycling and high CO2 supply through carbon mass balance analysis in Arthrospira culture. In all CO2 supply conditions, carbon supply was higher than Arthrospira carbon assimilation, which accounted for 30–58% of supply. However, CO2 recovery of nearly 100% and 63% for lower (0.20 and 0.39 gC L−1 d−1) and higher (0.59 gC L−1 d−1) CO2 supply rates were achieved, respectively, because of the high concentration of the alkaline agent. The excess carbon accumulated in the medium and ultimately escaped from the system in a form of dissolved inorganic carbon (DIC). Dissolved organic carbon (DOC) contributed to 16–24% of the total photosynthetically assimilated carbon, and the final concentration reached 260–367 mgC L−1, but there was no significant growth reduction caused by DIC and DOC accumulation. This study demonstrated the stability of the medium-recycling process even at high CO2 supply rates although a balanced supply is recommended for longer operations.
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Bose A, Lin R, Rajendran K, O'Shea R, Xia A, Murphy JD. How to optimise photosynthetic biogas upgrading: a perspective on system design and microalgae selection. Biotechnol Adv 2019; 37:107444. [DOI: 10.1016/j.biotechadv.2019.107444] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2019] [Revised: 08/27/2019] [Accepted: 08/27/2019] [Indexed: 12/19/2022]
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Zorz JK, Sharp C, Kleiner M, Gordon PMK, Pon RT, Dong X, Strous M. A shared core microbiome in soda lakes separated by large distances. Nat Commun 2019; 10:4230. [PMID: 31530813 PMCID: PMC6748926 DOI: 10.1038/s41467-019-12195-5] [Citation(s) in RCA: 62] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2019] [Accepted: 08/16/2019] [Indexed: 11/25/2022] Open
Abstract
In alkaline soda lakes, concentrated dissolved carbonates establish productive phototrophic microbial mats. Here we show how microbial phototrophs and autotrophs contribute to this exceptional productivity. Amplicon and shotgun DNA sequencing data of microbial mats from four Canadian soda lakes indicate the presence of > 2,000 species of Bacteria and Eukaryotes. We recover metagenome-assembled-genomes for a core microbiome of < 100 abundant bacteria, present in all four lakes. Most of these are related to microbes previously detected in sediments of Asian alkaline lakes, showing that common selection principles drive community assembly from a globally distributed reservoir of alkaliphile biodiversity. Detection of > 7,000 proteins show how phototrophic populations allocate resources to specific processes and occupy complementary niches. Carbon fixation proceeds by the Calvin-Benson-Bassham cycle, in Cyanobacteria, Gammaproteobacteria, and, surprisingly, Gemmatimonadetes. Our study provides insight into soda lake ecology, as well as a template to guide efforts to engineer biotechnology for carbon dioxide conversion.
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Affiliation(s)
- Jackie K Zorz
- Department of Geoscience, University of Calgary, Calgary, AB, T2N 1N4, Canada.
| | - Christine Sharp
- Department of Geoscience, University of Calgary, Calgary, AB, T2N 1N4, Canada
| | - Manuel Kleiner
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, 27695, USA
| | - Paul M K Gordon
- Centre for Health Genomics and Informatics, University of Calgary, Calgary, AB, T2N 2T9, Canada
| | - Richard T Pon
- Centre for Health Genomics and Informatics, University of Calgary, Calgary, AB, T2N 2T9, Canada
| | - Xiaoli Dong
- Department of Geoscience, University of Calgary, Calgary, AB, T2N 1N4, Canada
| | - Marc Strous
- Department of Geoscience, University of Calgary, Calgary, AB, T2N 1N4, Canada
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Ataeian M, Liu Y, Canon-Rubio KA, Nightingale M, Strous M, Vadlamani A. Direct capture and conversion of CO 2 from air by growing a cyanobacterial consortium at pH up to 11.2. Biotechnol Bioeng 2019; 116:1604-1611. [PMID: 30906982 PMCID: PMC6593468 DOI: 10.1002/bit.26974] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2018] [Revised: 03/11/2019] [Accepted: 03/21/2019] [Indexed: 01/30/2023]
Abstract
Bioenergy with carbon capture and storage (BECCS) is recognized as a potential negative emission technology, needed to keep global warming within safe limits. With current technologies, large-scale implementation of BECCS would compromise food production. Bioenergy derived from phototrophic microorganisms, with direct capture of CO2 from air, could overcome this challenge and become a sustainable way to realize BECCS. Here we present an alkaline capture and conversion system that combines high atmospheric CO2 transfer rates with high and robust phototrophic biomass productivity (15.2 ± 1.0 g/m 2 /d). The system is based on a cyanobacterial consortium, that grows at high alkalinity (0.5 mol/L) and a pH swing between 10.4 and 11.2 during growth and harvest cycles.
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Affiliation(s)
- Maryam Ataeian
- Department of Geoscience, University of Calgary, Calgary, Alberta, Canada
| | - Yihua Liu
- Department of Geoscience, University of Calgary, Calgary, Alberta, Canada
| | | | | | - Marc Strous
- Department of Geoscience, University of Calgary, Calgary, Alberta, Canada
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Zheng Q, Xu X, Martin GJ, Kentish SE. Critical review of strategies for CO2 delivery to large-scale microalgae cultures. Chin J Chem Eng 2018. [DOI: 10.1016/j.cjche.2018.07.013] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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12
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Designer microbiomes for environmental, energy and health biotechnology. Curr Opin Microbiol 2018; 43:117-123. [DOI: 10.1016/j.mib.2017.12.007] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2017] [Revised: 12/08/2017] [Accepted: 12/20/2017] [Indexed: 01/19/2023]
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13
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Piiparinen J, Barth D, Eriksen NT, Teir S, Spilling K, Wiebe MG. Microalgal CO2 capture at extreme pH values. ALGAL RES 2018. [DOI: 10.1016/j.algal.2018.04.021] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Sharp CE, Urschel S, Dong X, Brady AL, Slater GF, Strous M. Robust, high-productivity phototrophic carbon capture at high pH and alkalinity using natural microbial communities. BIOTECHNOLOGY FOR BIOFUELS 2017; 10:84. [PMID: 28367229 PMCID: PMC5372337 DOI: 10.1186/s13068-017-0769-1] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/25/2016] [Accepted: 03/22/2017] [Indexed: 06/07/2023]
Abstract
BACKGROUND Bioenergy with carbon capture and storage (BECCS) has come to be seen as one of the most viable technologies to provide the negative carbon dioxide emissions needed to constrain global temperatures. In practice, algal biotechnology is the only form of BECCS that could be realized at scale without compromising food production. Current axenic algae cultivation systems lack robustness, are expensive and generally have marginal energy returns. RESULTS Here it is shown that microbial communities sampled from alkaline soda lakes, grown as biofilms at high pH (up to 10) and high alkalinity (up to 0.5 kmol m-3 NaHCO3 and NaCO3) display excellent (>1.0 kg m-3 day-1) and robust (>80 days) biomass productivity, at low projected overall costs. The most productive biofilms contained >100 different species and were dominated by a cyanobacterium closely related to Phormidium kuetzingianum (>60%). CONCLUSION Frequent harvesting and red light were the key factors that governed the assembly of a stable and productive microbial community.
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Affiliation(s)
- Christine E. Sharp
- Department of Geosciences, University of Calgary, 2500 University Drive NW, EEEL 509, Calgary, AB T2N 1N4 Canada
| | - Sydney Urschel
- Department of Geosciences, University of Calgary, 2500 University Drive NW, EEEL 509, Calgary, AB T2N 1N4 Canada
| | - Xiaoli Dong
- Department of Geosciences, University of Calgary, 2500 University Drive NW, EEEL 509, Calgary, AB T2N 1N4 Canada
| | - Allyson L. Brady
- School of Geography and Earth Science, McMaster University, Hamilton, ON Canada
| | - Greg F. Slater
- School of Geography and Earth Science, McMaster University, Hamilton, ON Canada
| | - Marc Strous
- Department of Geosciences, University of Calgary, 2500 University Drive NW, EEEL 509, Calgary, AB T2N 1N4 Canada
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