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Khatun D, Tanaka T, Aranishi F. Population structure and demographic history for year cohort dynamics of landlocked ayu Plecoglossus altivelis altivelis in dam reservoir of Japan. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:10896-10910. [PMID: 38214853 DOI: 10.1007/s11356-023-31743-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Accepted: 12/22/2023] [Indexed: 01/13/2024]
Abstract
Ayu Plecoglossus altivelis altivelis is a valuable osmeroid species for inland fishery in Japan. It is classified into two ecological forms of amphidromous migrating between rivers and sea and landlocked migrating between rivers and lakes or dam reservoirs. The number of dams and their reservoirs has remarkably increased in the twenty-first century under climate change, because of their respective roles in hydropower generation with negligible carbon emissions and in flood control. Dam reservoirs therefore become increasingly important as inland nursery grounds of ayu. In this study, we investigated the reproduction status of landlocked ayu migrating in the Haidzuka Dam reservoir and the Tabusa River in western Japan by molecular phylogenetic analysis based on population structure and demographic history for year cohort dynamics. A total of 849 individuals were collected monthly from October 2018 to September 2021 according to an annual life cycle of ayu. Nucleotide sequences of the partial mitochondrial DNA control region yielded 31 haplotypes, consisting of 4 shared haplotypes among the 2019, 2020 and 2021 cohorts and 27 unique haplotypes. The overall haplotype diversity and nucleotide diversity were calculated to be relatively low at 0.3503 ± 0.0206 and 0.0077 ± 0.0045, respectively, suggesting a founder event by dominant haplotypes. Star-shaped radiational haplotypes from dominant shared haplotypes on the median-joining network likely support a founder event. Although pairwise ФST values were determined to be very low among the year cohorts, only the 2019 cohort was found to have a significant difference from the 2020 and 2021 cohorts, for both of which Tajima's D values were also statistically significant. For the overall population, multimodal mismatch distribution and negative Tajima's D and Fu's Fs values in the neutrality test suggested population expansion or population subdivision. The native riverine population in the Tabusa River suffered habitat fragmentation and population bottleneck from dam construction, and therefore severe founder effect remained behind the artificially landlocked population with a low level of genetic diversity in the Haidzuka Dam reservoir.
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Affiliation(s)
- Dalia Khatun
- The United Graduate School of Agricultural Sciences, Tottori University, Tottori, 6808553, Japan
| | - Tomomi Tanaka
- Fisheries Ecosystem Project Center, Shimane University, Matsue, 6908504, Japan
| | - Futoshi Aranishi
- The United Graduate School of Agricultural Sciences, Tottori University, Tottori, 6808553, Japan.
- Fisheries Ecosystem Project Center, Shimane University, Matsue, 6908504, Japan.
- Institute of Agricultural and Life Sciences, Shimane University, Matsue, 6908504, Japan.
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Bubb DH, Birnie-Gauvin K, Tummers JS, Aarestrup K, Jepsen N, Lucas MC. Short-Term Effects of Low-Head Barrier Removals on Fish Communities and Habitats. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.697106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Barrier removal is increasingly being seen as the optimal solution to restore lotic habitat and fish communities, however, evidence of its efficacy is often limited to single sites or catchments. This study used a before–after methodology to examine the short-term (average, 541 days) effects of low-head (0.1–2.9 m) barrier removal at 22 sites distributed across Denmark and northern England on fish density, community, and river habitat responses. Following barrier removal, changes in the aquatic habitat were observed, such that the area immediately upstream of the former barrier location became shallower, with larger substrate and faster flow conditions. The reinstatement of this habitat was especially valuable in Danish streams, where these habitat features are rare, due to the naturally low gradients. Across all 22 sites fish species richness and diversity was similar before and after removal of barriers, likely because of the short study timescale (1–2 years). Across all sites combined, there was an increase in total fish density following barrier removal. A large increase in salmonid (Salmo trutta and Salmo salar) densities following barrier removal occurred at 7 out of 12 Danish sites. No similar response in salmonid density was observed at any of the UK sites which were mostly characterized by high channel gradients and short ponded zones. Two UK barrier removal sites showed marked increases in density of non-salmonid fish species. This study suggests that the removal of low-head barriers can be an effective method of restoring lotic habitats, and can lead to positive changes in fish density in the former ponded zone. The short-term effect of small barrier removal on the fish community is more variable and its effectiveness is likely to be determined by wider riverine processes.
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No decline of genetic diversity in elongate loach (Leptobotia elongata) with a tendency to form population structure in the upper Yangtze River. Glob Ecol Conserv 2020. [DOI: 10.1016/j.gecco.2020.e01072] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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Birnie-Gauvin K, Nielsen J, Frandsen SB, Olsen HM, Aarestrup K. Catchment-scale effects of river fragmentation: A case study on restoring connectivity. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2020; 264:110408. [PMID: 32217310 DOI: 10.1016/j.jenvman.2020.110408] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Revised: 02/03/2020] [Accepted: 03/05/2020] [Indexed: 06/10/2023]
Abstract
More than two thirds of large rivers worldwide are fragmented, threatening freshwater biodiversity, river integrity, and the services that freshwater ecosystems provide for human populations around the globe. In an effort to alleviate the impacts of barriers, engineered solutions have been developed, though with somewhat underwhelming results. River restoration, especially dam removal, is viewed as the optimal option though seldom the go-to approach. In this study, we evaluated the effects of a large restoration project (pseudo dam removal) in River Kolding, Southern Jutland, Denmark, via a before-after-control-impact (BACI) approach. Using a large dataset of electrofishing data from 74 sites (including downstream unaffected sites, reconnected sites and upstream regulated sites), we found that habitat connectivity was restored successfully, with a large increase in young-of-the-year brown trout (Salmo trutta) at reconnected sites, reaching similar densities to downstream (non-affected) sites. We further observed a decrease in length at reconnected sites, suggesting that natural spawning and rearing habitats were successfully restored too.
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Affiliation(s)
- Kim Birnie-Gauvin
- DTU Aqua, Section for Freshwater Fisheries and Ecology, Vejlsøvej 39, 8600, Silkeborg, Denmark.
| | - Jan Nielsen
- DTU Aqua, Section for Freshwater Fisheries and Ecology, Vejlsøvej 39, 8600, Silkeborg, Denmark
| | | | | | - Kim Aarestrup
- DTU Aqua, Section for Freshwater Fisheries and Ecology, Vejlsøvej 39, 8600, Silkeborg, Denmark
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Baumgartner MT, Piana PA, Baumgartner G, Gomes LC. Storage or Run-of-river Reservoirs: Exploring the Ecological Effects of Dam Operation on Stability and Species Interactions of Fish Assemblages. ENVIRONMENTAL MANAGEMENT 2020; 65:220-231. [PMID: 31853587 DOI: 10.1007/s00267-019-01243-x] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Accepted: 12/05/2019] [Indexed: 06/10/2023]
Abstract
Water level variation has an important role in the biology of fish species, driving behavior, feeding, and reproduction both in natural and modified environments. In reservoirs, different dam operation schemes result in alternative patterns of water level fluctuations. Storage (STR) reservoirs accumulate water and can vary the water level unpredictably, whereas this variation is more discrete in run-of-river (ROR) reservoirs. For this reason, ROR reservoirs are commonly presumed to be less environmentally harmful than STR reservoirs. We used multivariate autoregressive models (MAR) to compare the stability and species interactions of fish assemblages from two reservoirs under alternative operation schemes, using long-term data (15 years). We hypothesized that the lower variability of water level in the ROR reservoir would coincide with a more stable fish assemblage than in the STR reservoir. Contrary to our expectation, the MAR properties related to resilience and resistance indicated that the fish assemblage from the ROR was less stable than that from the STR reservoir. This suggests that the absence of water level variation limits the potential direct (movement and reproduction of fish) and indirect (primary production and nutrient input) benefits for fish that arise from the temporal environmental heterogeneity. Most importantly, this study highlights the need to reexamine the implications of ROR reservoirs on the health of aquatic communities. At least for fish, management actions should include varying the water level in a regime as similar as possible to the natural flow regime of the river, in order to improve the state of assemblages.
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Affiliation(s)
- Matheus T Baumgartner
- Programa de Pós-graduação em Ecologia de Ambientes Aquáticos Continentais, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Vila Esperança, CEP, Maringá, Paraná, 87020-900, Brazil.
| | - Pitágoras A Piana
- Grupo de Pesquisas em Recursos Pesqueiros e Limnologia (Gerpel), Universidade Estadual do Oeste do Paraná (Unioeste), Rua da Faculdade, 645, Jardim Santa Maria, CEP, Toledo, Paraná, 85903-000, Brazil
| | - Gilmar Baumgartner
- Grupo de Pesquisas em Recursos Pesqueiros e Limnologia (Gerpel), Universidade Estadual do Oeste do Paraná (Unioeste), Rua da Faculdade, 645, Jardim Santa Maria, CEP, Toledo, Paraná, 85903-000, Brazil
| | - Luiz C Gomes
- Programa de Pós-graduação em Ecologia de Ambientes Aquáticos Continentais, Universidade Estadual de Maringá (UEM), Av. Colombo, 5790, Vila Esperança, CEP, Maringá, Paraná, 87020-900, Brazil
- Departamento de Biologia, Núcleo de Pesquisas em Limnologia, Ictiologia e Aquicultura (Nupélia), Universidade Estadual de Maringá (UEM), Maringá, Paraná, Brazil
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Dam Removal Effects on Benthic Macroinvertebrate Dynamics: A New England Stream Case Study (Connecticut, USA). SUSTAINABILITY 2019. [DOI: 10.3390/su11102875] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Dam removal is an increasingly common stream restoration tool. Yet, removing dams from small streams also represents a major disturbance to rivers that can have varied impacts on environmental conditions and aquatic biota. We examined the effects of dam removal on the structure, function, and composition of benthic macroinvertebrate (BMI) communities in a temperate New England stream. We examined the effects of dam removal over the dam removal time-series using linear mixed effects models, autoregressive models, non-metric multidimensional scaling, and indicator and similarity analyses. The results indicated that the dam removal stimulated major shifts in BMI community structure and composition above and below the dam, and that the BMI communities are becoming more similar over time. The mixed model analysis revealed that BMI functional groups and diversity were significantly influenced by sample site and several BMI groups also experienced significant interactions between site and dam stage (P < 0.05), while the multivariate analyses revealed that community structure continues to differ among sites, even three years after dam removal. Our findings indicate that stream restoration through dam removal can have site-specific influences on BMI communities, that interactions among BMI taxa are important determinants of the post-dam removal community, and that the post-dam-removal BMI community continues to be in a state of reorganization.
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Effects of Sediment Released from a Check Dam on Sediment Deposits and Fish and Macroinvertebrate Communities in a Small Stream. WATER 2019. [DOI: 10.3390/w11040716] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Dam removal is typically intended for river restoration or as a countermeasure for aging dams. The influence of dam removal has mainly been studied in large rivers. This study is intended to investigate the influence of the sediment supplied after opening a check dam drain in a small steep stream to contribute to the establishment of sediment release technology form check dam by accumulating the basic knowledge about the influence of sediment release. Deposited sediment in the impoundment was rapidly discharged immediately after opening the drain outlet, and a moderate sediment discharge followed. The water course of the sediments deposited by repeated channel widening and riverbed degradation tended to stop longitudinal topographic changes from downstream. In addition, the turbidity during a flood was high in the first year and tended to decrease in the second year. As for the ecosystem response, changes in the benthic macroinvertebrate community were confirmed in downstream sites, and net-spinning species especially deceased immediately after the sediment supply began. Our monitoring results suggest that the increasing turbidity was suppressed during the flood because sediment release was conducted from the small-scale facility. As a result, a negative impact on the aquatic ecosystem seemed to be reduced.
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