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Fan Y, Shi B. Endophytic Fungi from the Four Staple Crops and Their Secondary Metabolites. Int J Mol Sci 2024; 25:6057. [PMID: 38892244 PMCID: PMC11173346 DOI: 10.3390/ijms25116057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Revised: 05/28/2024] [Accepted: 05/29/2024] [Indexed: 06/21/2024] Open
Abstract
Endophytic fungi are present in every plant, and crops are no exception. There are more than 50,000 edible plant species on the planet, but only 15 crops provide 90 percent of the global energy intake, and "the big four"-wheat, rice, maize and potato-are staples for about 5 billion people. Not only do the four staple crops contribute to global food security, but the endophytic fungi within their plant tissues are complex ecosystems that have been under scrutiny. This review presents an outline of the endophytic fungi and their secondary metabolites in four staple crops: wheat, rice, maize and potato. A total of 292 endophytic fungi were identified from the four major crops, with wheat having the highest number of 157 endophytic fungi. Potato endophytic fungi had the highest number of secondary metabolites, totaling 204 compounds, compared with only 23 secondary metabolites from the other three crops containing endophytic fungi. Some of the compounds are those with specific structural and pharmacological activities, which may be beneficial to agrochemistry and medicinal chemistry.
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Affiliation(s)
| | - Baobao Shi
- School of Pharmaceutical Sciences, South-Central Minzu University, Wuhan 430074, China;
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de Menezes Souza J, de Menezes Fonseca D, Pinheiro de Souza J, Cordeiro do Nascimento L, Mendes Hughes F, Pereira Bezerra JD, Góes-Neto A, Ferreira-Silva A. Cactus Endophytic Fungi and Bioprospecting for their Enzymes and Bioactive Molecules: A Systematic Review. Chem Biodivers 2023; 20:e202301413. [PMID: 37934008 DOI: 10.1002/cbdv.202301413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Revised: 11/06/2023] [Accepted: 11/07/2023] [Indexed: 11/08/2023]
Abstract
Endophytic fungi are associated with plant health and represent a remarkable source of potential of enzymes and bioactive compounds, but the diversity of endophytes remains uncertain and poorly explored, especially in Cactaceae, one of the most species-rich families adapted to growing in arid and semi-arid regions. The aim of this study was to conduct a systematic review on the diversity and bioprospecting of endophytic fungi from Cactaceae. We analysed peer-reviewed articles from seven databases using PRISMA guidelines. The results showed that the Cactaceae family is a source of new taxa, but the diversity of endophytic fungi of Cactaceae is little explored, mainly the diversity among tissues and by metagenomics. Bioprospecting studies have shown that these microorganisms can be used in the production of enzymes and larvicidal and antifungal compounds. Our results are relevant as a starting point for researchers to develop studies that expand the knowledge of plant mycobiota in arid and semi-arid ecosystems, as well as comprising a remarkable source of fungal compounds with several biotechnological applications.
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Affiliation(s)
- Jeferson de Menezes Souza
- Graduate Program in Biotechnology, Universidade Estadual de Feira de Santana, Feira de Santana City, 44036-900, Bahia State, Brazil
| | | | - Jaciara Pinheiro de Souza
- Graduate Program in Pharmaceutical Sciences, Universidade Federal de Sergipe, Aracaju City, 41100-000, Sergipe State, Brazil
| | - Luciana Cordeiro do Nascimento
- Agricultural Sciences Center, Department of Phytotechnics and Environmental Sciences, Universidade Federal da Paraíba, Areia City, 58397-000, Paraíba State, Brazil
| | - Frederic Mendes Hughes
- Conselho de Curadores das Coleções Científicas and Graduate Program in Zoology, Universidade Estadual de Santa Cruz, Ilhéus City, 45662-900, Bahia State, Brazil
| | - Jadson Diogo Pereira Bezerra
- Departament of Biosciences and Technology, Institute of Tropical Pathology and Public Health, Universidade Federal de Goiás, Goiânia City, 74605-050, Goiás State, Brazil
| | - Aristóteles Góes-Neto
- Department of Microbiology, Institute of Biological Sciences, Universidade Federal de Minas Gerais, Belo Horizonte City, 31270-901, Minas Gerais State, Brazil
| | - Alice Ferreira-Silva
- Agricultural Sciences Center, Department of Phytotechnics and Environmental Sciences, Universidade Federal da Paraíba, Areia City, 58397-000, Paraíba State, Brazil
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Zhang X, Lv H, Tian M, Dong Z, Fu Q, Sun J, Huang Q, Wang J. Colonization characteristics of fungi in Polygonum hydropipe L. and Polygonum lapathifolium L. and its effect on the content of active ingredients. FRONTIERS IN PLANT SCIENCE 2022; 13:984483. [PMID: 36247635 PMCID: PMC9554492 DOI: 10.3389/fpls.2022.984483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/02/2022] [Accepted: 08/18/2022] [Indexed: 06/16/2023]
Abstract
Polygonum hydropiper, is a plant of the Persicaria genus, which is commonly used to treat various diseases, including gastrointestinal disorders, neurological disorders, inflammation, and diarrhea. However, because of different local standards of P. hydropiper, people often confuse it with Polygonum lapathifolium L. and other closely related plants. This poses a serious threat to the safety and efficacy of the clinical use of P. hydropiper. This study aims to determine the six active ingredients of P. hydropiper and P. lapathifolium. Then the endophytic fungi and rhizosphere soil of the two species were sequenced by Illumina Miseq PE300. The results show significant differences between the community composition of the leaves, stems, and roots of the P. hydropiper and the P. lapathifolium in the same soil environment. Of the six secondary metabolites detected, five had significant differences between P. hydropiper and P. lapathifolium. Then, we evaluated the composition of the significantly different communities between P. hydropiper and P. lapathifolium. In the P. hydropiper, the relative abundance of differential communities in the leaves was highest, of which Cercospora dominated the differential communities in the leaves and stem; in the P. lapathifolium, the relative abundance of differential community in the stem was highest, and Cladosporium dominated the differential communities in the three compartments. By constructing the interaction network of P. hydropiper and P. lapathifolium and analyzing the network nodes, we found that the core community in P. hydropiper accounted for 87.59% of the total community, dominated by Cercospora; the core community of P. lapathifolium accounted for 19.81% of the total community, dominated by Sarocladium. Of these core communities, 23 were significantly associated with active ingredient content. Therefore, we believe that the community from Cercospora significantly interferes with recruiting fungal communities in P. hydropiper and affects the accumulation of secondary metabolites in the host plant. These results provide an essential foundation for the large-scale production of P. hydropiper. They indicate that by colonizing specific fungal communities, secondary metabolic characteristics of host plants can be helped to be shaped, which is an essential means for developing new medicinal plants.
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Affiliation(s)
- Xiaorui Zhang
- State Key Laboratory of Characteristic Chinese Medicine Resources in Southwest China, Chengdu University of Traditional Chinese Medicine, Chengdu, China
- Pharmacy College, Chengdu University of Traditional Chinese Medicine, Chengdu, China
| | - Hongyang Lv
- State Key Laboratory of Characteristic Chinese Medicine Resources in Southwest China, Chengdu University of Traditional Chinese Medicine, Chengdu, China
- Pharmacy College, Chengdu University of Traditional Chinese Medicine, Chengdu, China
| | - Maoying Tian
- State Key Laboratory of Characteristic Chinese Medicine Resources in Southwest China, Chengdu University of Traditional Chinese Medicine, Chengdu, China
- Pharmacy College, Chengdu University of Traditional Chinese Medicine, Chengdu, China
| | - Zhaowei Dong
- State Key Laboratory of Characteristic Chinese Medicine Resources in Southwest China, Chengdu University of Traditional Chinese Medicine, Chengdu, China
- Pharmacy College, Chengdu University of Traditional Chinese Medicine, Chengdu, China
| | - Qinwen Fu
- State Key Laboratory of Characteristic Chinese Medicine Resources in Southwest China, Chengdu University of Traditional Chinese Medicine, Chengdu, China
- Pharmacy College, Chengdu University of Traditional Chinese Medicine, Chengdu, China
| | - Jilin Sun
- Sichuan Fuzheng Pharmaceutical Co., Ltd., Chengdu, China
| | - Qinwan Huang
- State Key Laboratory of Characteristic Chinese Medicine Resources in Southwest China, Chengdu University of Traditional Chinese Medicine, Chengdu, China
- Pharmacy College, Chengdu University of Traditional Chinese Medicine, Chengdu, China
| | - Jin Wang
- State Key Laboratory of Characteristic Chinese Medicine Resources in Southwest China, Chengdu University of Traditional Chinese Medicine, Chengdu, China
- Pharmacy College, Chengdu University of Traditional Chinese Medicine, Chengdu, China
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Wei PP, Ai HL, Shi BB, Ye K, Lv X, Pan XY, Ma XJ, Xiao D, Li ZH, Lei XX. Paecilins F–P, new dimeric chromanones isolated from the endophytic fungus Xylaria curta E10, and structural revision of paecilin A. Front Microbiol 2022; 13:922444. [PMID: 36118220 PMCID: PMC9478379 DOI: 10.3389/fmicb.2022.922444] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Accepted: 08/15/2022] [Indexed: 11/13/2022] Open
Abstract
A total of eleven new dimeric chromanones, paecilins F-P (2–12), were isolated from the endophytic fungus Xylaria curta E10, along with four known analogs (1, 13–15). Their structures and absolute configurations were determined by extensive experimental spectroscopic methods, single-crystal X-ray diffraction, and equivalent circulating density (ECD) calculations. In addition, the structure of paecilin A, which was reported to be a symmetric C8-C8′ dimeric pattern, was revised by analysis of the nuclear magnetic resonance (NMR) data, and single-crystal X-ray diffraction. Compound 1 showed antifungal activity against the human pathogenic fungus Candida albicans with a minimum inhibitory concentration of 16 μg/mL, and Compounds 8 and 10 showed antibacterial activity against the gram-negative bacterium Escherichia coli with the same minimum inhibitory concentration of 16 μg/mL.
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Byregowda R, Prasad SR, Oelmüller R, Nataraja KN, Prasanna Kumar MK. Is Endophytic Colonization of Host Plants a Method of Alleviating Drought Stress? Conceptualizing the Hidden World of Endophytes. Int J Mol Sci 2022; 23:ijms23169194. [PMID: 36012460 PMCID: PMC9408852 DOI: 10.3390/ijms23169194] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 08/12/2022] [Accepted: 08/13/2022] [Indexed: 11/16/2022] Open
Abstract
In the wake of changing climatic conditions, plants are frequently exposed to a wide range of biotic and abiotic stresses at various stages of their development, all of which negatively affect their growth, development, and productivity. Drought is one of the most devastating abiotic stresses for most cultivated crops, particularly in arid and semiarid environments. Conventional breeding and biotechnological approaches are used to generate drought-tolerant crop plants. However, these techniques are costly and time-consuming. Plant-colonizing microbes, notably, endophytic fungi, have received increasing attention in recent years since they can boost plant growth and yield and can strengthen plant responses to abiotic stress. In this review, we describe these microorganisms and their relationship with host plants, summarize the current knowledge on how they “reprogram” the plants to promote their growth, productivity, and drought tolerance, and explain why they are promising agents in modern agriculture.
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Affiliation(s)
- Roopashree Byregowda
- Department of Seed Science and Technology, University of Agricultural Sciences, Bangalore 560065, India
- Department of Plant Physiology, Matthias Schleiden Institute of Genetics, Bioinformatics and Molecular Botany, Friedrich-Schiller-University, 07743 Jena, Germany
| | | | - Ralf Oelmüller
- Department of Plant Physiology, Matthias Schleiden Institute of Genetics, Bioinformatics and Molecular Botany, Friedrich-Schiller-University, 07743 Jena, Germany
- Correspondence:
| | - Karaba N. Nataraja
- Department of Crop Physiology, University of Agricultural Sciences, Bangalore 560065, India
| | - M. K. Prasanna Kumar
- Department of Plant Pathology, University of Agricultural Sciences, Bangalore 560065, India
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Characterization and antimicrobial activity of fungal endophytes from Crocus caspius (Iridaceae). BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2022. [DOI: 10.1016/j.bcab.2022.102429] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Gusmão AS, Abreu LS, Tavares JF, de Freitas HF, Silva da Rocha Pita S, Dos Santos EG, Caldas IS, Vieira AA, Silva EO. Computer-Guided Trypanocidal Activity of Natural Lactones Produced by Endophytic Fungus of Euphorbia umbellata. Chem Biodivers 2021; 18:e2100493. [PMID: 34403573 DOI: 10.1002/cbdv.202100493] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Accepted: 08/17/2021] [Indexed: 11/11/2022]
Abstract
Hundreds of millions of people worldwide are affected by Chagas' disease caused by Trypanosoma cruzi. Since the current treatment lack efficacy, specificity, and suffers from several side-effects, novel therapeutics are mandatory. Natural products from endophytic fungi have been useful sources of lead compounds. In this study, three lactones isolated from an endophytic strain culture were in silico evaluated for rational guidance of their bioassay screening. All lactones displayed in vitro activity against T. cruzi epimastigote and trypomastigote forms. Notably, the IC50 values of (+)-phomolactone were lower than benznidazole (0.86 vs. 30.78 μM against epimastigotes and 0.41 vs. 4.88 μM against trypomastigotes). Target-based studies suggested that lactones displayed their trypanocidal activities due to T. cruzi glyceraldehyde-3-phosphate dehydrogenase (TcGAPDH) inhibition, and the binding free energy for all three TcGAPDH-lactone complexes suggested that (+)-phomolactone has a lower score value (-3.38), corroborating with IC50 assays. These results highlight the potential of these lactones for further anti-T. cruzi drug development.
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Affiliation(s)
- Amanda Santos Gusmão
- Organic Chemistry Department, Chemistry Institute, Federal University of Bahia, Barão de Jeremoabo 147, Salvador, 40170115, Bahia, Brazil
| | - Lucas Silva Abreu
- Institute for Research in Pharmaceuticals and Medications, Federal University of Paraíba, Campus I, João Pessoa, 58051900, Paraíba, Brazil
| | - Josean Fechine Tavares
- Institute for Research in Pharmaceuticals and Medications, Federal University of Paraíba, Campus I, João Pessoa, 58051900, Paraíba, Brazil
| | - Humberto Fonseca de Freitas
- Laboratory of Bioinformatics and Molecular Modeling (LaBiMM), Pharmacy College, Federal University of Bahia, Barão de Jeremoabo 147, Salvador, 40170115, Bahia, Brazil
| | - Samuel Silva da Rocha Pita
- Laboratory of Bioinformatics and Molecular Modeling (LaBiMM), Pharmacy College, Federal University of Bahia, Barão de Jeremoabo 147, Salvador, 40170115, Bahia, Brazil
| | - Elda Gonçalves Dos Santos
- Pathology and Parasitology Department, Institute of Biomedical Sciences, Federal University of Alfenas, Gabriel Monteiro da Silva 500, Alfenas, 37130001, Minas Gerais, Brazil
| | - Ivo Santana Caldas
- Pathology and Parasitology Department, Institute of Biomedical Sciences, Federal University of Alfenas, Gabriel Monteiro da Silva 500, Alfenas, 37130001, Minas Gerais, Brazil
| | - André Alexandre Vieira
- Organic Chemistry Department, Chemistry Institute, Federal University of Bahia, Barão de Jeremoabo 147, Salvador, 40170115, Bahia, Brazil
| | - Eliane Oliveira Silva
- Organic Chemistry Department, Chemistry Institute, Federal University of Bahia, Barão de Jeremoabo 147, Salvador, 40170115, Bahia, Brazil
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