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Pereira C, Di Sansebastiano GP. Mechanisms of membrane traffic in plant cells. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 169:102-111. [PMID: 34775176 DOI: 10.1016/j.plaphy.2021.11.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2021] [Revised: 10/31/2021] [Accepted: 11/02/2021] [Indexed: 06/13/2023]
Abstract
The organelles of the secretory pathway are characterized by specific organization and function but they communicate in different ways with intense functional crosstalk. The best known membrane-bound transport carriers are known as protein-coated vesicles. Other traffic mechanisms, despite the intense investigations, still show incongruences. The review intends to provide a general view of the mechanisms involved in membrane traffic. We evidence that organelles' biogenesis involves mechanisms that actively operate during the entire cell cycle and the persistent interconnections between the Endoplasmic reticulum (ER), Golgi apparatus, trans-Golgi network (TGN) and endosomes, the vacuolar complex and the plasma membrane (PM) may be seen as a very dynamic membrane network in which vesicular traffic is part of a general maturation process.
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Affiliation(s)
- Cláudia Pereira
- GreenUPorto-Sustainable Agrifood Production Research Centre & Department of Biology, Faculty of Sciences, University of Porto, Rua Do Campo Alegre, S/nº, 4169-007, Porto, Portugal.
| | - Gian Pietro Di Sansebastiano
- Department of Biological and Environmental Sciences and Technologies (DISTEBA), University of Salento, Campus ECOTEKNE, 73100, Lecce, Italy.
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Zhu Y, Wang Q, Guo W, Gao Z, Wang Y, Xu Y, Liu Y, Ma Z, Yan F, Li J. Screening and identification of salt-tolerance genes in Sophora alopecuroides and functional verification of SaAQP. PLANTA 2021; 254:77. [PMID: 34535825 DOI: 10.1007/s00425-021-03726-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2021] [Accepted: 09/06/2021] [Indexed: 06/13/2023]
Abstract
Overexpression of SaAQP can improve the salt tolerance of transgenic soybean hairy roots and A. thaliana. Salt stress severely affects crop yield and food security. There is a need to improve the salt tolerance of crops, but the discovery and utilization of salt-tolerance genes remains limited. Owing to its strong stress tolerance, Sophora alopecuroides is ideal for the identification of salt-tolerance genes. Therefore, we aimed to screen and identify the salt-tolerance genes in S. alopecuroides. With a yeast expression library of seedlings, salt-tolerant genes were screened using a salt-containing medium to simulate salt stress. By combining salt-treatment screening and transcriptome sequencing, 11 candidate genes related to salt tolerance were identified, including genes for peroxidase, inositol methyltransferase, aquaporin, cysteine synthase, pectinesterase, and WRKY. The expression dynamics of candidate genes were analyzed after salt treatment of S. alopecuroides, and salt tolerance was verified in yeast BY4743. The candidate genes participated in the salt-stress response in S. alopecuroides, and their overexpression significantly improved the salt tolerance of yeast. Salt tolerance mediated by SaAQP was further verified in soybean hairy roots and Arabidopsis thaliana, and it was found that SaAQP might enhance the salt tolerance of A. thaliana by participating in a reactive oxygen species scavenging mechanism. This result provides new genetic resources in plant breeding for salt resistance.
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Affiliation(s)
- Youcheng Zhu
- College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, China
| | - Qingyu Wang
- College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, China
| | - Wenyun Guo
- College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, China
| | - Ziwei Gao
- College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, China
| | - Ying Wang
- College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, China
| | - Yang Xu
- College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, China
| | - Yajing Liu
- College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, China
| | - Zhipeng Ma
- College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, China
| | - Fan Yan
- College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, China.
| | - Jingwen Li
- College of Plant Science, Jilin University, 5333 Xi'an Road, Changchun City, China.
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Comparative shotgun proteomic analysis of wild and domesticated Opuntia spp. species shows a metabolic adaptation through domestication. J Proteomics 2016; 143:353-364. [PMID: 27072113 DOI: 10.1016/j.jprot.2016.04.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2015] [Revised: 04/01/2016] [Accepted: 04/04/2016] [Indexed: 01/01/2023]
Abstract
UNLABELLED The Opuntia genus is widely distributed in America, but the highest richness of wild species are found in Mexico, as well as the most domesticated Opuntia ficus-indica, which is the most domesticated species and an important crop in agricultural economies of arid and semiarid areas worldwide. During domestication process, the Opuntia morphological characteristics were favored, such as less and smaller spines in cladodes and less seeds in fruits, but changes at molecular level are almost unknown. To obtain more insights about the Opuntia molecular changes through domestication, a shotgun proteomic analysis and database-dependent searches by homology was carried out. >1000 protein species were identified and by using a label-free quantitation method, the Opuntia proteomes were compared in order to identify differentially accumulated proteins among wild and domesticated species. Most of the changes were observed in glucose, secondary, and 1C metabolism, which correlate with the observed protein, fiber and phenolic compounds accumulation in Opuntia cladodes. Regulatory proteins, ribosomal proteins, and proteins related with response to stress were also observed in differential accumulation. These results provide new valuable data that will help to the understanding of the molecular changes of Opuntia species through domestication. BIOLOGICAL SIGNIFICANCE Opuntia species are well adapted to dry and warm conditions in arid and semiarid regions worldwide, and they are highly productive plants showing considerable promises as an alternative food source. However, there is a gap regarding Opuntia molecular mechanisms that enable them to grow in extreme environmental conditions and how the domestication processes has changed them. In the present study, a shotgun analysis was carried out to characterize the proteomes of five Opuntia species selected by its domestication degree. Our results will help to a better understanding of proteomic features underlying the selection and specialization under evolution and domestication of Opuntia and will provide a platform for basic biology research and gene discovery.
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Piro A, Marín-Guirao L, Serra IA, Spadafora A, Sandoval-Gil JM, Bernardeau-Esteller J, Fernandez JMR, Mazzuca S. The modulation of leaf metabolism plays a role in salt tolerance of Cymodocea nodosa exposed to hypersaline stress in mesocosms. FRONTIERS IN PLANT SCIENCE 2015; 6:464. [PMID: 26167167 PMCID: PMC4482034 DOI: 10.3389/fpls.2015.00464] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2015] [Accepted: 06/11/2015] [Indexed: 05/03/2023]
Abstract
Applying proteomics, we tested the physiological responses of the euryhaline seagrass Cymodocea nodosa to deliberate manipulation of salinity in a mesocosm system. Plants were subjected to a chronic hypersaline condition (43 psu) to compare protein expression and plant photochemistry responses after 15 and 30 days of exposure with those of plants cultured under normal/ambient saline conditions (37 psu). Results showed a general decline in the expression level of leaf proteins in hypersaline stressed plants, with more intense reductions after long-lasting exposure. Specifically, the carbon-fixing enzyme RuBisCo displayed a lower accumulation level in stressed plants relative to controls. In contrast, the key enzymes involved in the regulation of glycolysis, cytosolic glyceraldehyde-3-phosphate dehydrogenase, enolase 2 and triose-phosphate isomerase, showed significantly higher accumulation levels. These responses suggested a shift in carbon metabolism in stressed plants. Hypersaline stress also induced a significant alteration of the photosynthetic physiology of C. nodosa by means of a down-regulation in structural proteins and enzymes of both PSII and PSI. However we found an over-expression of the cytochrome b559 alpha subunit of the PSII initial complex, which is a receptor for the PSII core proteins involved in biogenesis or repair processes and therefore potentially involved in the absence of effects at the photochemical level of stressed plants. As expected hypersalinity also affects vacuolar metabolism by increasing the leaf cell turgor pressure and enhancing the up-take of Na(+) by over-accumulating the tonoplast specific intrinsic protein pyrophosphate-energized inorganic pyrophosphatase (H(+)-PPase) coupled to the Na(+)/H(+)-antiporter. The modulation of carbon metabolism and the enhancement of vacuole capacity in Na(+) sequestration and osmolarity changes are discussed in relation to salt tolerance of C. nodosa.
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Affiliation(s)
- Amalia Piro
- Laboratorio di Biologia e Proteomica Vegetale, Dipartimento di Chimica e Tecnologie Chimiche, Università della CalabriaRende, Italy
| | - Lázaro Marín-Guirao
- Spanish Institute of Oceanography, Oceanographic Centre of MurciaMurcia, Spain
| | - Ilia A. Serra
- Laboratorio di Biologia e Proteomica Vegetale, Dipartimento di Chimica e Tecnologie Chimiche, Università della CalabriaRende, Italy
| | - Antonia Spadafora
- Laboratorio di Biologia e Proteomica Vegetale, Dipartimento di Chimica e Tecnologie Chimiche, Università della CalabriaRende, Italy
| | | | | | | | - Silvia Mazzuca
- Laboratorio di Biologia e Proteomica Vegetale, Dipartimento di Chimica e Tecnologie Chimiche, Università della CalabriaRende, Italy
- *Correspondence: Silvia Mazzuca, Laboratorio di Biologia e Proteomica Vegetale, Dipartimento di Chimica e Tecnologie Chimiche, Università della Calabria, Ponte Bucci 12C, 87036 Rende, Italy,
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Proteomic analysis of Mesembryanthemum crystallinum leaf microsomal fractions finds an imbalance in V-ATPase stoichiometry during the salt-induced transition from C3 to CAM. Biochem J 2013; 450:407-15. [PMID: 23252380 DOI: 10.1042/bj20121087] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
The halophyte Mesembryanthemum crystallinum adapts to salt stress by salt uptake and switching from C3 photosynthesis to CAM (crassulacean acid metabolism). An important role in this process is played by transport proteins in the tonoplast of the central vacuole. In the present study we examine dynamic changes in the protein composition during salt-stress adaptation in microsomes from M. crystallinum leaves. Plants challenged with 400 mM NaCl accumulate salt by day 4 of treatment and malic acid only at day 12; a switching to CAM hence follows any initial steps of salt adaptation with a delay. Using a label-free and semiquantitative approach, we identified the most dramatic changes between the proteome of control plants and plants harvested after 12 days of the treatment; the abundance of 14 proteins was significantly affected. The proteomic data revealed that the majority of the subunits of V-ATPase (vacuolar H(+)-ATPase) holoenzyme. The salt treatment somewhat decreased the abundance of all subunits in the short term (4 days). Long-term adaptation, including the switching to CAM, goes together with a strong increase in the representation of all detectable subunits. Because this increase is subunit-specific, with the highest rise occurring for subunits E and c, the data suggest that long-term adaptation to salt stress correlates with a change in V-ATPase subunit stoichiometry and highlight the structural plasticity of this holoenzyme.
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Jou Y, Wang YL, Yen HE. Vacuolar acidity, protein profile, and crystal composition of epidermal bladder cells of the halophyte Mesembryanthemum crystallinum. FUNCTIONAL PLANT BIOLOGY : FPB 2007; 34:353-359. [PMID: 32689362 DOI: 10.1071/fp06269] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2006] [Accepted: 01/10/2007] [Indexed: 06/11/2023]
Abstract
The halophyte Mesembryanthemum crytallinum L. (ice plant) is marked by giant epidermal bladder cells (EBC). The differentiation of pavement cells into EBC occurs at an early developmental stage. EBC occupy most of the surface area in the aerial parts of salt-stressed mature ice plants. A large vacuolar reservoir for ion and water storage plays an important role in salinity adaptation. To monitor the acidity of the vacuole at different developmental stages of EBC, peels from the abaxial surface were stained with a pH-sensitive dye, neutral red (NR). Presence of both NR-stained (acidic) and NR-unstained (neutral) EBC were found at the juvenile stage in ice plants. Continuous exposure to illumination decreased the acidity of the NR-stained cells. The EBC protein profile illustrated the prominent co-existence of highly acidic and basic proteins in these specialised cells. Major proteins that accumulate in EBC are involved in photosynthesis, sodium compartmentalisation, and defence. Numerous raphide crystals were found in well fertilised ice plants. Salt-stressed cells exhibited changes in the surface charge and element composition of raphide crystals. A disappearance of potassium in the high-salt grown crystals suggests that these crystals might serve as a potassium reservoir to maintain the Na+/K+ homeostasis in this halophyte.
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Affiliation(s)
- Yingtzy Jou
- Department of Life Sciences, National Chung Hsing University, Taichung 40227, Taiwan
| | - Ya-Ling Wang
- Department of Life Sciences, National Chung Hsing University, Taichung 40227, Taiwan
| | - Hungchen Emilie Yen
- Department of Life Sciences, National Chung Hsing University, Taichung 40227, Taiwan
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Winter K, Holtum JAM. Environment or development? Lifetime net CO2 exchange and control of the expression of Crassulacean acid metabolism in Mesembryanthemum crystallinum. PLANT PHYSIOLOGY 2007; 143:98-107. [PMID: 17056756 PMCID: PMC1761986 DOI: 10.1104/pp.106.088922] [Citation(s) in RCA: 60] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2006] [Accepted: 10/09/2006] [Indexed: 05/12/2023]
Abstract
The relative influence of plant age and environmental stress signals in triggering a shift from C(3) photosynthesis to Crassulacean acid metabolism (CAM) in the annual halophytic C(3)-CAM species Mesembryanthemum crystallinum was explored by continuously monitoring net CO(2) exchange of whole shoots from the seedling stage until seed set. Plants exposed to high salinity (400 mm NaCl) in hydroponic culture solution or grown in saline-droughted soil acquired between 11% and 24% of their carbon via net dark CO(2) uptake involving CAM. In contrast, plants grown under nonsaline, well-watered conditions were capable of completing their life cycle by operating in the C(3) mode without ever exhibiting net CO(2) uptake at night. These observations are not consistent with the widely expressed view that the induction of CAM by high salinity in M. crystallinum represents an acceleration of preprogrammed developmental processes. Rather, our study demonstrates that the induction of the CAM pathway for carbon acquisition in M. crystallinum is under environmental control.
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Affiliation(s)
- Klaus Winter
- Smithsonian Tropical Research Institute, Balboa, Ancon, Republic of Panama.
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