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Kumar A, Dadhwal M, Mukherjee G, Srivastava A, Gupta S, Ahuja V. Phytoremediation: Sustainable Approach for Heavy Metal Pollution. SCIENTIFICA 2024; 2024:3909400. [PMID: 39430119 PMCID: PMC11490348 DOI: 10.1155/2024/3909400] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 05/19/2024] [Accepted: 09/20/2024] [Indexed: 10/22/2024]
Abstract
Rapid industrialization, mining, and other anthropogenic activities have poisoned our environment with heavy metals, negatively impacting all forms of life. Heavy metal pollution causes physiological and neurological disorders, as heavy metals are endocrine disrupters, carcinogenic, and teratogenic. Therefore, it becomes mandatory to address the challenge of heavy metal contamination on a global scale. Physical and chemical approaches have been employed for pollutant removal and detoxification, but these methods cannot be adopted universally due to high cost, labor intensiveness, and possible negative impact on natural microflora. Phytoremediation is one of the preferred and safest approaches for environmental management due to its high efficiency and low cost of investment. The plant can uptake the pollutants and heavy metals from water and soil through an intense root network via rhizofiltration and process via phytostabilization, phytovolatilization, and accumulation. At a cellular level, the phytoremediation process relies on natural mechanisms of plant cells, e.g., absorption, transpiration, intracellular storage, and accumulation to counter the detrimental effects of pollutants. It is widely accepted because of its novelty, low cost, and high efficiency; however, the process is comparatively slower. In addition, plants can store pollutants for a long time but again become a challenge at the end of the life cycle. The current review summarizes phytoremediation as a potential cure for heavy metal pollutants, released from natural as well as anthropogenic sources. It will provide insight into the advancement and evolution of advanced techniques like nanoremediation that can improve the rate of phytoremediation, along with making it sustainable, cost-effective, and economically viable.
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Affiliation(s)
- Abhijit Kumar
- University Institute of Biotechnology, Chandigarh University, Gharuan, Punjab, India
| | - Mishika Dadhwal
- Department of Biotechnology, Himachal Pradesh University, Shimla 171005, Himachal Pradesh, India
| | - Gunjan Mukherjee
- University Institute of Biotechnology, Chandigarh University, Gharuan, Punjab, India
| | - Apeksha Srivastava
- University Institute of Biotechnology, Chandigarh University, Gharuan, Punjab, India
| | - Saurabh Gupta
- Department of Microbiology, Mata Gujri College (Affiliated to Punjabi University), Fatehgarh Sahib 140406, Punjab, India
| | - Vishal Ahuja
- University Institute of Biotechnology, Chandigarh University, Gharuan, Punjab, India
- University Centre for Research & Development, Chandigarh University, Gharuan, Punjab, India
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Morozova V, Babkin I, Mogileva A, Kozlova Y, Tikunov A, Bardasheva A, Fedorets V, Zhirakovskaya E, Ushakova T, Tikunova N. The First Pseudomonas Phage vB_PseuGesM_254 Active against Proteolytic Pseudomonas gessardii Strains. Viruses 2024; 16:1561. [PMID: 39459895 PMCID: PMC11512268 DOI: 10.3390/v16101561] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2024] [Revised: 09/24/2024] [Accepted: 09/27/2024] [Indexed: 10/28/2024] Open
Abstract
Bacteria of the Pseudomonas genus, including the Pseudomonas gessardii subgroup, play an important role in the environmental microbial communities. Psychrotolerant isolates of P. gessardii can produce thermostable proteases and lipases. When contaminating refrigerated raw milk, these bacteria spoil it by producing enzymes resistant to pasteurization. One possible way to prevent spoilage of raw milk is to use Pseudomonas lytic phages specific to undesirable P. gessardii isolates. The first phage, Pseudomonas vB_PseuGesM_254, was isolated and characterized, which is active against several proteolytic P. gessardii strains. This lytic myophage can infect and lyse its host strain at 24 °C and at low temperature (8 °C); so, it has the potential to prevent contamination of raw milk. The vB_PseuGesM_254 genome, 95,072 bp, shows a low level of intergenomic similarity with the genomes of known phages. Comparative proteomic ViPTree analysis indicated that vB_PseuGesM_254 is associated with a large group of Pseudomonas phages that are members of the Skurskavirinae and Gorskivirinae subfamilies and the Nankokuvirus genus. The alignment constructed using ViPTree shows that the vB_PseuGesM_254 genome has a large inversion between ~53,100 and ~70,700 bp, which is possibly a distinctive feature of a new taxonomic unit within this large group of Pseudomonas phages.
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Affiliation(s)
- Vera Morozova
- Institute of Chemical Biology and Fundamental Medicine Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia; (V.M.); (A.M.)
| | - Igor Babkin
- Institute of Chemical Biology and Fundamental Medicine Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia; (V.M.); (A.M.)
| | - Alina Mogileva
- Institute of Chemical Biology and Fundamental Medicine Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia; (V.M.); (A.M.)
- Faculty of Natural Sciences, Novosibirsk State University, Novosibirsk 630090, Russia
| | - Yuliya Kozlova
- Institute of Chemical Biology and Fundamental Medicine Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia; (V.M.); (A.M.)
| | - Artem Tikunov
- Institute of Chemical Biology and Fundamental Medicine Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia; (V.M.); (A.M.)
| | - Alevtina Bardasheva
- Institute of Chemical Biology and Fundamental Medicine Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia; (V.M.); (A.M.)
| | - Valeria Fedorets
- Institute of Chemical Biology and Fundamental Medicine Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia; (V.M.); (A.M.)
- Faculty of Natural Sciences, Novosibirsk State University, Novosibirsk 630090, Russia
| | - Elena Zhirakovskaya
- Institute of Chemical Biology and Fundamental Medicine Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia; (V.M.); (A.M.)
| | - Tatiana Ushakova
- Institute of Chemical Biology and Fundamental Medicine Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia; (V.M.); (A.M.)
| | - Nina Tikunova
- Institute of Chemical Biology and Fundamental Medicine Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia; (V.M.); (A.M.)
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Garmaroody ER, PahnehKolaei ND, Ramezani O, Hamedi S. Detoxification Approaches of Bagasse Pith Hydrolysate Affecting Xylitol Production by Rhodotorula mucilaginosa. Appl Biochem Biotechnol 2024; 196:129-144. [PMID: 37103733 DOI: 10.1007/s12010-023-04539-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/11/2023] [Indexed: 04/28/2023]
Abstract
In this study, the potential of bagasse pith (the waste of sugar and paper industry) was investigated for bio-xylitol production for the first time. Xylose-rich hydrolysate was prepared using 8% dilute sulfuric acid, at 120 °C for 90 min. Then, the acid-hydrolyzed solution was detoxified by individual overliming (OL), active carbon (AC), and their combination (OL+AC). The amounts of reducing sugars and inhibitors (furfural and hydroxyl methyl furfural) were measured after acid pre-treatment and detoxification process. Thereafter, xylitol was produced from detoxified hydrolysate by Rhodotorula mucilaginosa yeast. Results showed that after acid hydrolysis, the sugar yield was 20%. Detoxification by overliming and active carbon methods increased the reducing sugar content up to 65% and 36% and decreased the concentration of inhibitors to >90% and 16%, respectively. Also, combined detoxification caused an increase in the reducing sugar content (>73%) and a complete removal of inhibitors. The highest productivity of xylitol (0.366 g/g) by yeast was attained after the addition of 100 g/l non-detoxified xylose-rich hydrolysate into fermentation broth after 96 h, while the xylitol productivity enhanced to 0.496 g/g after adding the similar amount of xylose-rich hydrolysate detoxified by combined method (OL+AC2.5%).
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Affiliation(s)
- Esmaeil Rasooly Garmaroody
- Dept. of Bio-refinery, Faculty of New Technologies, Zirab Campus, Shahid Beheshti University, Savadkooh, Mazandaran, Iran
| | - Niloufar Davoodi PahnehKolaei
- Dept. of Bio-refinery, Faculty of New Technologies, Zirab Campus, Shahid Beheshti University, Savadkooh, Mazandaran, Iran
| | - Omid Ramezani
- Dept. of Bio-refinery, Faculty of New Technologies, Zirab Campus, Shahid Beheshti University, Savadkooh, Mazandaran, Iran.
| | - Sepideh Hamedi
- Dept. of Bio-refinery, Faculty of New Technologies, Zirab Campus, Shahid Beheshti University, Savadkooh, Mazandaran, Iran
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Alencar BRA, de Freitas RAA, Guimarães VEP, Silva RK, Elsztein C, da Silva SP, Dutra ED, de Morais Junior MA, de Souza RB. Meyerozyma caribbica Isolated from Vinasse-Irrigated Sugarcane Plantation Soil: A Promising Yeast for Ethanol and Xylitol Production in Biorefineries. J Fungi (Basel) 2023; 9:789. [PMID: 37623560 PMCID: PMC10455855 DOI: 10.3390/jof9080789] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 07/12/2023] [Accepted: 07/24/2023] [Indexed: 08/26/2023] Open
Abstract
The production of fuels and other industrial products from renewable sources has intensified the search for new substrates or for the expansion of the use of substrates already in use, as well as the search for microorganisms with different metabolic capacities. In the present work, we isolated and tested a yeast from the soil of sugarcane irrigated with vinasse, that is, with high mineral content and acidic pH. The strain of Meyerozyma caribbica URM 8365 was able to ferment glucose, but the use of xylose occurred when some oxygenation was provided. However, some fermentation of xylose to ethanol in oxygen limitation also occurs if glucose was present. This strain was able to produce ethanol from molasses substrate with 76% efficiency, showing its tolerance to possible inhibitors. High ethanol production efficiencies were also observed in acidic hydrolysates of each bagasse, sorghum, and cactus pear biomass. Mixtures of these substrates were tested and the best composition was found for the use of excess plant biomass in supplementation of primary substrates. It was also possible to verify the production of xylitol from xylose when the acetic acid concentration is reduced. Finally, the proposed metabolic model allowed calculating how much of the xylose carbon can be directed to the production of ethanol and/or xylitol in the presence of glucose. With this, it is possible to design an industrial plant that combines the production of ethanol and/or xylitol using combinations of primary substrates with hydrolysates of their biomass.
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Affiliation(s)
- Bárbara Ribeiro Alves Alencar
- Laboratory of Biomass Energy, Department of Nuclear Energy, Federal University of Pernambuco, Recife 50670-901, Brazil; (B.R.A.A.); (S.P.d.S.); (E.D.D.)
- Laboratory of Microbial Genetics, Department of Genetics, Federal University of Pernambuco, Recife 50670-901, Brazil; (R.A.A.d.F.); (R.K.S.); (C.E.)
| | - Renan Anderson Alves de Freitas
- Laboratory of Microbial Genetics, Department of Genetics, Federal University of Pernambuco, Recife 50670-901, Brazil; (R.A.A.d.F.); (R.K.S.); (C.E.)
| | | | - Rayssa Karla Silva
- Laboratory of Microbial Genetics, Department of Genetics, Federal University of Pernambuco, Recife 50670-901, Brazil; (R.A.A.d.F.); (R.K.S.); (C.E.)
- Laboratory of Microbial Metabolism, Institute of Biological Sciences, University of Pernambuco, Recife 50110-000, Brazil;
| | - Carolina Elsztein
- Laboratory of Microbial Genetics, Department of Genetics, Federal University of Pernambuco, Recife 50670-901, Brazil; (R.A.A.d.F.); (R.K.S.); (C.E.)
| | - Suzyanne Porfírio da Silva
- Laboratory of Biomass Energy, Department of Nuclear Energy, Federal University of Pernambuco, Recife 50670-901, Brazil; (B.R.A.A.); (S.P.d.S.); (E.D.D.)
| | - Emmanuel Damilano Dutra
- Laboratory of Biomass Energy, Department of Nuclear Energy, Federal University of Pernambuco, Recife 50670-901, Brazil; (B.R.A.A.); (S.P.d.S.); (E.D.D.)
| | - Marcos Antonio de Morais Junior
- Laboratory of Microbial Genetics, Department of Genetics, Federal University of Pernambuco, Recife 50670-901, Brazil; (R.A.A.d.F.); (R.K.S.); (C.E.)
| | - Rafael Barros de Souza
- Laboratory of Microbial Metabolism, Institute of Biological Sciences, University of Pernambuco, Recife 50110-000, Brazil;
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Ahuja V, Bhatt AK, Banu JR, Kumar V, Kumar G, Yang YH, Bhatia SK. Microbial Exopolysaccharide Composites in Biomedicine and Healthcare: Trends and Advances. Polymers (Basel) 2023; 15:polym15071801. [PMID: 37050415 PMCID: PMC10098801 DOI: 10.3390/polym15071801] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Revised: 03/27/2023] [Accepted: 04/03/2023] [Indexed: 04/08/2023] Open
Abstract
Microbial exopolysaccharides (EPSs), e.g., xanthan, dextran, gellan, curdlan, etc., have significant applications in several industries (pharma, food, textiles, petroleum, etc.) due to their biocompatibility, nontoxicity, and functional characteristics. However, biodegradability, poor cell adhesion, mineralization, and lower enzyme activity are some other factors that might hinder commercial applications in healthcare practices. Some EPSs lack biological activities that make them prone to degradation in ex vivo, as well as in vivo environments. The blending of EPSs with other natural and synthetic polymers can improve the structural, functional, and physiological characteristics, and make the composites suitable for a diverse range of applications. In comparison to EPS, composites have more mechanical strength, porosity, and stress-bearing capacity, along with a higher cell adhesion rate, and mineralization that is required for tissue engineering. Composites have a better possibility for biomedical and healthcare applications and are used for 2D and 3D scaffold fabrication, drug carrying and delivery, wound healing, tissue regeneration, and engineering. However, the commercialization of these products still needs in-depth research, considering commercial aspects such as stability within ex vivo and in vivo environments, the presence of biological fluids and enzymes, degradation profile, and interaction within living systems. The opportunities and potential applications are diverse, but more elaborative research is needed to address the challenges. In the current article, efforts have been made to summarize the recent advancements in applications of exopolysaccharide composites with natural and synthetic components, with special consideration of pharma and healthcare applications.
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Affiliation(s)
- Vishal Ahuja
- University Institute of Biotechnology, Chandigarh University, Mohali 140413, Punjab, India
- University Centre for Research & Development, Chandigarh University, Mohali 140413, Punjab, India
| | - Arvind Kumar Bhatt
- Department of Biotechnology, Himachal Pradesh University, Shimla 171005, Himachal Pradesh, India
| | - J. Rajesh Banu
- Department of Life Sciences, Central University of Tamil Nadu, Thiruvarur 610005, Tamil Nadu, India
| | - Vinod Kumar
- Centre for Climate and Environmental Protection, School of Water, Energy and Environment, Cranfield University, Cranfield MK43 0AL, UK
| | - Gopalakrishnan Kumar
- Institute of Chemistry, Bioscience and Environmental Engineering, Faculty of Science and Technology, University of Stavanger, P.O. Box 8600 Forus, 4036 Stavanger, Norway
| | - Yung-Hun Yang
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
- Institute for Ubiquitous Information Technology and Applications, Seoul 05029, Republic of Korea
| | - Shashi Kant Bhatia
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
- Institute for Ubiquitous Information Technology and Applications, Seoul 05029, Republic of Korea
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Dasgupta D, Ahuja V, Singh R, More S, Mudliar S, Kumar M. Food-grade xylitol production from corncob biomass with acute oral toxicity studies. World J Microbiol Biotechnol 2023; 39:102. [PMID: 36797527 DOI: 10.1007/s11274-023-03542-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Accepted: 02/05/2023] [Indexed: 02/18/2023]
Abstract
Xylitol, a sugar substitute, is widely used in various food formulations and finds a steady global market. In this study, xylitol crystals were produced from corncob by fermentation (as an alternative to the chemical catalytic process) by a GRAS yeast Pichia caribbica MTCC 5703 and characterized in detail for their purity and presence of any possible contaminant that may adversely affect mammalian cell growth and proliferation. The acute and chronic oral toxicity trials demonstrated no gross pathological changes with average weekly weight gain in female Wistar rats at high xylitol loading (LD50 > 10,000 mg/kg body weight). The clinical chemistry analysis supported the evidence of no dose-dependent effect by analyzing blood biochemical parameters. The finding suggests the possible application of the crystals (> 98% purity) as a food-grade ingredient for commercial manufacture pending human trials.
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Affiliation(s)
- Diptarka Dasgupta
- Biochemistry & Biotechnology Area, CSIR-Indian Institute of Petroleum (CSIR-IIP), Dehradun, Uttarakhand, 248005, India. .,Academy of Scientific & Industrial Research (AcSIR), CSIR-Indian Institute of Petroleum, Dehradun, Uttarakhand, 248005, India.
| | - Vishal Ahuja
- Biochemistry & Biotechnology Area, CSIR-Indian Institute of Petroleum (CSIR-IIP), Dehradun, Uttarakhand, 248005, India
| | - Raghuvir Singh
- Analytical Sciences Division, CSIR-Indian Institute of Petroleum, Dehradun, Uttarakhand, 248005, India
| | - Snehal More
- Biochemical Sciences Division, CSIR-National Chemical Laboratory (CSIR-NCL), Pune, Maharashtra, 411008, India
| | - Sandeep Mudliar
- Department Of Plant Cell Biotechnology, CSIR-Central Food Technology Research Institute, Mysore, 570001, India
| | - Madan Kumar
- Department of Biochemistry, CSIR-Central Food Technology Research Institute (CSIR-CFTRI), Mysore, 70001, India
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Biological production of xylitol by using nonconventional microbial strains. World J Microbiol Biotechnol 2022; 38:249. [DOI: 10.1007/s11274-022-03437-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Accepted: 10/07/2022] [Indexed: 10/31/2022]
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Kant Bhatia S, Ahuja V, Chandel N, Gurav R, Kant Bhatia R, Govarthanan M, Kumar Tyagi V, Kumar V, Pugazendhi A, Rajesh Banu J, Yang YH. Advances in algal biomass pretreatment and its valorisation into biochemical and bioenergy by the microbial processes. BIORESOURCE TECHNOLOGY 2022; 358:127437. [PMID: 35680087 DOI: 10.1016/j.biortech.2022.127437] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Revised: 06/03/2022] [Accepted: 06/04/2022] [Indexed: 06/15/2023]
Abstract
Urbanization and pollution are the major issues of the current time own to the exhaustive consumption of fossil fuels which have a detrimental effect on the nation's economies and air quality due to greenhouse gas (GHG) emissions and shortage of energy reserves. Algae, an autotrophic organism provides a green substitute for energy as well as commercial products. Algal extracts become an efficient source for bioactive compounds having anti-microbial, anti-oxidative, anti-inflammatory, and anti-cancerous potential. Besides the conventional approach, residual biomass from any algal-based process might act as a renewable substrate for fermentation. Likewise, lignocellulosic biomass, algal biomass can also be processed for sugar recovery by different pre-treatment strategies like acid and alkali hydrolysis, microwave, ionic liquid, and ammonia fiber explosion, etc. Residual algal biomass hydrolysate can be used as a feedstock to produce bioenergy (biohydrogen, biogas, methane) and biochemicals (organic acids, polyhydroxyalkanoates) via microbial fermentation.
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Affiliation(s)
- Shashi Kant Bhatia
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea; Institute for Ubiquitous Information Technology and Applications, Seoul 05029, Republic of Korea
| | - Vishal Ahuja
- Department of Biotechnology, Himachal Pradesh University, Shimla 171005, India
| | - Neha Chandel
- School of Medical and Allied Sciences, GD Goenka University, Gurugram 122103, Haryana, India
| | - Ranjit Gurav
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Ravi Kant Bhatia
- Department of Biotechnology, Himachal Pradesh University, Shimla 171005, India
| | - Muthusamy Govarthanan
- Department of Environmental Engineering, Kyungpook National University, Daegu 41566, Republic of Korea
| | - Vinay Kumar Tyagi
- Environmental Hydrology Division National Institute of Hydrology (NIH), Roorkee 247667, Uttarakhand, India
| | - Vinod Kumar
- Centre for Climate and Environmental Protection, School of Water, Energy and Environment, Cranfield University, Cranfield MK43 0AL, UK
| | - Arivalagan Pugazendhi
- Emerging Materials for Energy and Environmental Applications Research Group, School of Engineering and Technology, Van Lang University, Ho Chi Minh City, Vietnam
| | - J Rajesh Banu
- Department of Life Sciences, Central University of Tamil Nadu, Neelakudi, Thiruvarur 610005, India
| | - Yung-Hun Yang
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea; Institute for Ubiquitous Information Technology and Applications, Seoul 05029, Republic of Korea.
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