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For: Arce-Rodríguez A, Puente-Sánchez F, Avendaño R, Martínez-Cruz M, de Moor JM, Pieper DH, Chavarría M. Thermoplasmatales and sulfur-oxidizing bacteria dominate the microbial community at the surface water of a CO2-rich hydrothermal spring located in Tenorio Volcano National Park, Costa Rica. Extremophiles 2019;23:177-187. [PMID: 30600357 DOI: 10.1007/s00792-018-01072-6] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2018] [Accepted: 12/11/2018] [Indexed: 10/27/2022]
Number Cited by Other Article(s)
1
Geng L, Yang L, Liu T, Zhang S, Sun X, Wang W, Pan H, Yan L. Higher diversity of sulfur-oxidizing bacteria based on soxB gene sequencing in surface water than in spring in Wudalianchi volcanic group, NE China. Int Microbiol 2025;28:119-136. [PMID: 38740654 DOI: 10.1007/s10123-024-00526-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Revised: 04/26/2024] [Accepted: 05/03/2024] [Indexed: 05/16/2024]
2
Lipus D, Jia Z, Sondermann M, Bussert R, Bartholomäus A, Yang S, Wagner D, Kallmeyer J. Microbial diversity and biogeochemical interactions in the seismically active and CO2- rich Eger Rift ecosystem. ENVIRONMENTAL MICROBIOME 2024;19:113. [PMID: 39722025 DOI: 10.1186/s40793-024-00651-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Accepted: 12/01/2024] [Indexed: 12/28/2024]
3
Selci M, Correggia M, Cordone A, Guida M, Quero GM, Piredda R, Vetriani C, Ramirez C, Lloyd KG, de Moor JM, Barry PH, Schrenk MO, Giovannelli D. Recreational hot springs as environmental reservoir of potential multidrug-resistant pathogens. ENVIRONMENTAL RESEARCH 2024;262:119841. [PMID: 39182755 DOI: 10.1016/j.envres.2024.119841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2024] [Revised: 08/21/2024] [Accepted: 08/22/2024] [Indexed: 08/27/2024]
4
Basili M, Rogers TJ, Nakagawa M, Yücel M, de Moor JM, Barry PH, Schrenk MO, Jessen GL, Sánchez-Murillo R, Zahirovic S, Bekaert DV, Ramirez CJ, Bastoni D, Cordone A, Lloyd KG, Giovannelli D. Subsurface microbial community structure shifts along the geological features of the Central American Volcanic Arc. PLoS One 2024;19:e0308756. [PMID: 39536057 PMCID: PMC11560019 DOI: 10.1371/journal.pone.0308756] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Accepted: 07/30/2024] [Indexed: 11/16/2024]  Open
5
Liu Y, Macalady JL, Sánchez-España J, Burgos WD. Enrichment of acid-tolerant sulfide-producing microbes from an acidic pit lake. Front Microbiol 2024;15:1475137. [PMID: 39539707 PMCID: PMC11559266 DOI: 10.3389/fmicb.2024.1475137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2024] [Accepted: 09/30/2024] [Indexed: 11/16/2024]  Open
6
Rudenko TS, Trubitsina LI, Terentyev VV, Trubitsin IV, Borshchevskiy VI, Tishchenko SV, Gabdulkhakov AG, Leontievsky AA, Grabovich MY. Mechanism of Intracellular Elemental Sulfur Oxidation in Beggiatoa leptomitoformis, Where Persulfide Dioxygenase Plays a Key Role. Int J Mol Sci 2024;25:10962. [PMID: 39456744 PMCID: PMC11507549 DOI: 10.3390/ijms252010962] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2024] [Revised: 10/08/2024] [Accepted: 10/09/2024] [Indexed: 10/28/2024]  Open
7
Golyshina OV, Lunev EA, Distaso MA, Bargiela R, Gaines MC, Daum B, Ferrer M, Bale NJ, Koenen M, Damsté JSS, Yakimov MM, Golyshin PN. Oxyplasma meridianum gen. nov., sp. nov., an extremely acidophilic organotrophic member of the order Thermoplasmatales. Int J Syst Evol Microbiol 2024;74:006499. [PMID: 39190454 PMCID: PMC11349054 DOI: 10.1099/ijsem.0.006499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2024] [Accepted: 08/13/2024] [Indexed: 08/28/2024]  Open
8
Twible LE, Whaley-Martin K, Chen LX, Colenbrander Nelson T, Arrey JL, Jarolimek CV, King JJ, Ramilo L, Sonnenberg H, Banfield JF, Apte SC, Warren LA. pH and thiosulfate dependent microbial sulfur oxidation strategies across diverse environments. Front Microbiol 2024;15:1426584. [PMID: 39101034 PMCID: PMC11294248 DOI: 10.3389/fmicb.2024.1426584] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2024] [Accepted: 06/18/2024] [Indexed: 08/06/2024]  Open
9
Li W, Feng Q, Li Z, Jin T, Zhang Y, Southam G. Inhibition of iron oxidation in Acidithiobacillus ferrooxidans by low-molecular-weight organic acids: Evaluation of performance and elucidation of mechanisms. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;927:171919. [PMID: 38554963 DOI: 10.1016/j.scitotenv.2024.171919] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2023] [Revised: 03/20/2024] [Accepted: 03/21/2024] [Indexed: 04/02/2024]
10
De Castro O, Avino M, Carraturo F, Di Iorio E, Giovannelli D, Innangi M, Menale B, Mormile N, Troisi J, Guida M. Profiling microbial communities in an extremely acidic environment influenced by a cold natural carbon dioxide spring: A study of the Mefite in Ansanto Valley, Southern Italy. ENVIRONMENTAL MICROBIOLOGY REPORTS 2024;16:e13241. [PMID: 38407001 PMCID: PMC10895555 DOI: 10.1111/1758-2229.13241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Accepted: 01/30/2024] [Indexed: 02/27/2024]
11
Marín-Paredes R, Bolívar-Torres HH, Coronel-Gaytán A, Martínez-Romero E, Servín-Garcidueñas LE. A Metagenome from a Steam Vent in Los Azufres Geothermal Field Shows an Abundance of Thermoplasmatales archaea and Bacteria from the Phyla Actinomycetota and Pseudomonadota. Curr Issues Mol Biol 2023;45:5849-5864. [PMID: 37504286 PMCID: PMC10378326 DOI: 10.3390/cimb45070370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Revised: 07/09/2023] [Accepted: 07/10/2023] [Indexed: 07/29/2023]  Open
12
Arce-Rodríguez A, Libby E, Castellón E, Avendaño R, Cambronero JC, Vargas M, Pieper DH, Bertilsson S, Chavarría M, Puente-Sánchez F. Out of the blue: the independent activity of sulfur-oxidizers and diatoms mediate the sudden color shift of a tropical river. ENVIRONMENTAL MICROBIOME 2023;18:6. [PMID: 36658604 PMCID: PMC9854191 DOI: 10.1186/s40793-023-00464-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Accepted: 01/10/2023] [Indexed: 06/17/2023]
13
Phytochemistry Meets Geochemistry—Blumenol C Sulfate: A New Megastigmane Sulfate from Palicourea luxurians (Rubiaceae: Palicoureeae). Molecules 2022;27:molecules27217284. [PMID: 36364108 PMCID: PMC9658315 DOI: 10.3390/molecules27217284] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Revised: 10/14/2022] [Accepted: 10/21/2022] [Indexed: 11/17/2022]  Open
14
Zhou N, Keffer JL, Polson SW, Chan CS. Unraveling Fe(II)-Oxidizing Mechanisms in a Facultative Fe(II) Oxidizer, Sideroxydans lithotrophicus Strain ES-1, via Culturing, Transcriptomics, and Reverse Transcription-Quantitative PCR. Appl Environ Microbiol 2022;88:e0159521. [PMID: 34788064 PMCID: PMC8788666 DOI: 10.1128/aem.01595-21] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Accepted: 11/11/2021] [Indexed: 11/20/2022]  Open
15
Velázquez-Ríos IO, Rincón-Rosales R, Gutiérrez-Miceli FA, Alcántara-Hernández RJ, Ruíz-Valdiviezo VM. Prokaryotic diversity across a pH gradient in the “El Chichón” crater-lake: a naturally thermo-acidic environment. Extremophiles 2022;26:8. [DOI: 10.1007/s00792-022-01257-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Accepted: 01/04/2022] [Indexed: 12/17/2022]
16
Peña-Ocaña BA, Ovando-Ovando CI, Puente-Sánchez F, Tamames J, Servín-Garcidueñas LE, González-Toril E, Gutiérrez-Sarmiento W, Jasso-Chávez R, Ruíz-Valdiviezo VM. Metagenomic and metabolic analyses of poly-extreme microbiome from an active crater volcano lake. ENVIRONMENTAL RESEARCH 2022;203:111862. [PMID: 34400165 DOI: 10.1016/j.envres.2021.111862] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2021] [Revised: 08/02/2021] [Accepted: 08/05/2021] [Indexed: 06/13/2023]
17
Bergsten P, Vannier P, Klonowski AM, Knobloch S, Gudmundsson MT, Jackson MD, Marteinsson VT. Basalt-Hosted Microbial Communities in the Subsurface of the Young Volcanic Island of Surtsey, Iceland. Front Microbiol 2021;12:728977. [PMID: 34659155 PMCID: PMC8513691 DOI: 10.3389/fmicb.2021.728977] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Accepted: 08/30/2021] [Indexed: 01/04/2023]  Open
18
Sasso Pisano Geothermal Field Environment Harbours Diverse Ktedonobacteria Representatives and Illustrates Habitat-Specific Adaptations. Microorganisms 2021;9:microorganisms9071402. [PMID: 34209727 PMCID: PMC8306680 DOI: 10.3390/microorganisms9071402] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2021] [Revised: 06/24/2021] [Accepted: 06/24/2021] [Indexed: 12/26/2022]  Open
19
Kadnikov VV, Mardanov AV, Beletsky AV, Grigoriev MA, Karnachuk OV, Ravin NV. Thermophilic Chloroflexi Dominate in the Microbial Community Associated with Coal-Fire Gas Vents in the Kuznetsk Coal Basin, Russia. Microorganisms 2021;9:microorganisms9050948. [PMID: 33924824 PMCID: PMC8146126 DOI: 10.3390/microorganisms9050948] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 04/23/2021] [Accepted: 04/24/2021] [Indexed: 01/12/2023]  Open
20
Rojas-Gätjens D, Arce-Rodríguez A, Puente-Sánchez F, Avendaño R, Libby E, Mora-Amador R, Rojas-Jimenez K, Fuentes-Schweizer P, Pieper DH, Chavarría M. Temperature and elemental sulfur shape microbial communities in two extremely acidic aquatic volcanic environments. Extremophiles 2021;25:85-99. [PMID: 33416983 DOI: 10.1007/s00792-020-01213-w] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2020] [Accepted: 12/16/2020] [Indexed: 01/22/2023]
21
Arce-Rodríguez A, Puente-Sánchez F, Avendaño R, Libby E, Mora-Amador R, Rojas-Jimenez K, Martínez M, Pieper DH, Chavarría M. Microbial Community Structure Along a Horizontal Oxygen Gradient in a Costa Rican Volcanic Influenced Acid Rock Drainage System. MICROBIAL ECOLOGY 2020;80:793-808. [PMID: 32572534 DOI: 10.1007/s00248-020-01530-9] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Accepted: 05/17/2020] [Indexed: 06/11/2023]
22
Application of Firefly Luciferase (Luc) as a Reporter Gene for the Chemoautotrophic and Acidophilic Acidithiobacillus spp. Curr Microbiol 2020;77:3724-3730. [PMID: 32945904 DOI: 10.1007/s00284-020-02195-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Accepted: 09/03/2020] [Indexed: 10/23/2022]
23
Microbial Residents of the Atlantis Massif's Shallow Serpentinite Subsurface. Appl Environ Microbiol 2020;86:AEM.00356-20. [PMID: 32220840 PMCID: PMC7237769 DOI: 10.1128/aem.00356-20] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Accepted: 03/21/2020] [Indexed: 12/25/2022]  Open
24
Rameez MJ, Pyne P, Mandal S, Chatterjee S, Alam M, Bhattacharya S, Mondal N, Sarkar J, Ghosh W. Two pathways for thiosulfate oxidation in the alphaproteobacterial chemolithotroph Paracoccus thiocyanatus SST. Microbiol Res 2019;230:126345. [PMID: 31585234 DOI: 10.1016/j.micres.2019.126345] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2019] [Revised: 09/08/2019] [Accepted: 09/21/2019] [Indexed: 02/02/2023]
25
Dutta A, Sar P, Sarkar J, Dutta Gupta S, Gupta A, Bose H, Mukherjee A, Roy S. Archaeal Communities in Deep Terrestrial Subsurface Underneath the Deccan Traps, India. Front Microbiol 2019;10:1362. [PMID: 31379755 PMCID: PMC6646420 DOI: 10.3389/fmicb.2019.01362] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2018] [Accepted: 05/31/2019] [Indexed: 11/13/2022]  Open
26
Yang CL, Chen XK, Wang R, Lin JQ, Liu XM, Pang X, Zhang CJ, Lin JQ, Chen LX. Essential Role of σ Factor RpoF in Flagellar Biosynthesis and Flagella-Mediated Motility of Acidithiobacillus caldus. Front Microbiol 2019;10:1130. [PMID: 31178842 PMCID: PMC6543871 DOI: 10.3389/fmicb.2019.01130] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2019] [Accepted: 05/03/2019] [Indexed: 12/04/2022]  Open
27
Zheng Y, Saitou A, Wang CM, Toyoda A, Minakuchi Y, Sekiguchi Y, Ueda K, Takano H, Sakai Y, Abe K, Yokota A, Yabe S. Genome Features and Secondary Metabolites Biosynthetic Potential of the Class Ktedonobacteria. Front Microbiol 2019;10:893. [PMID: 31080444 PMCID: PMC6497799 DOI: 10.3389/fmicb.2019.00893] [Citation(s) in RCA: 47] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2019] [Accepted: 04/08/2019] [Indexed: 12/30/2022]  Open
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