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Hinton B, Stockin KA, Bury SJ, Peters KJ, Betty EL. Isotopic Niche Analysis of Long-Finned Pilot Whales (Globicephala melas edwardii) in Aotearoa New Zealand Waters. BIOLOGY 2022; 11:biology11101414. [PMID: 36290319 PMCID: PMC9598128 DOI: 10.3390/biology11101414] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Revised: 07/26/2022] [Accepted: 08/31/2022] [Indexed: 11/25/2022]
Abstract
Simple Summary Isotopic niche analyses can elucidate a species’ foraging ecology. Using isotopic values of δ13C, δ15N and δ34S, the isotopic niche of long-finned pilot whales (Globicephala melas edwardii) in Aotearoa New Zealand was investigated for animals that stranded in six different events across two locations between 2009 and 2017. Generalised additive models revealed that stranding event was a stronger predictor for δ13C and δ15N values than body length, sex, or reproductive status, indicating that spatiotemporal differences explained isotopic variation of G. m. edwardii in New Zealand waters better than ontogenetic factors. Abstract The quantification of a species’ trophic niche is important to understand the species ecology and its interactions with the ecosystem it resides in. Despite the high frequency of long-finned pilot whale (Globicephala melas edwardii) strandings on the Aotearoa New Zealand coast, their trophic niche remains poorly understood. To assess the isotopic niche of G. m. edwardii within New Zealand, ontogenetic (sex, total body length, age, maturity status, reproductive group) and spatiotemporal (stranding location, stranding event, and stranding year) variation were investigated. Stable isotopes of carbon (δ13C) and nitrogen (δ15N) were examined from skin samples of 125 G. m. edwardii (67 females and 58 males) collected at mass-stranding events at Onetahua Farewell Spit in 2009 (n = 20), 2011 (n = 20), 2014 (n = 27) and 2017 (n = 20) and at Rakiura Stewart Island in 2010 (n = 19) and 2011 (n = 19). Variations in δ34S values were examined for a subset of 36 individuals. General additive models revealed that stranding event was the strongest predictor for δ13C and δ15N values, whilst sex was the strongest predictor of δ34S isotopic values. Although similar within years, δ13C values were lower in 2014 and 2017 compared to all other years. Furthermore, δ15N values were higher within Farewell Spit 2017 compared to any other stranding event. This suggests that the individuals stranded in Farewell Spit in 2017 may have been feeding at a higher trophic level, or that the nitrogen baseline may have been higher in 2017 than in other years. Spatiotemporal differences explained isotopic variation of G. m. edwardii in New Zealand waters better than ontogenetic factors.
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Affiliation(s)
- Bethany Hinton
- Cetacean Ecology Research Group, School of Natural Sciences, Massey University, Auckland 0745, New Zealand
- Correspondence: (B.H.); (E.L.B.)
| | - Karen A. Stockin
- Cetacean Ecology Research Group, School of Natural Sciences, Massey University, Auckland 0745, New Zealand
| | - Sarah J. Bury
- Environmental Isotopes and Molecular Biology Group, National Institute of Water and Atmospheric Research, Wellington 6021, New Zealand
| | - Katharina J. Peters
- Cetacean Ecology Research Group, School of Natural Sciences, Massey University, Auckland 0745, New Zealand
- School of Earth and Environment, University of Canterbury, Christchurch 8041, New Zealand
- Evolutionary Genetics Group, Department of Anthropology, University of Zurich, 8057 Zurich, Switzerland
- Global Ecology, College of Science and Engineering, Flinders University, Adelaide, SA 5001, Australia
| | - Emma L. Betty
- Cetacean Ecology Research Group, School of Natural Sciences, Massey University, Auckland 0745, New Zealand
- Correspondence: (B.H.); (E.L.B.)
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2
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Servheen C, Gunther KA. Conservation and management of the culture of bears. Ecol Evol 2022; 12:e8840. [PMID: 35462976 PMCID: PMC9019140 DOI: 10.1002/ece3.8840] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2021] [Revised: 03/29/2022] [Accepted: 03/31/2022] [Indexed: 11/10/2022] Open
Abstract
Culture is widely accepted as an important social factor present across a wide range of species. Bears have a culture as defined as behavioral traditions inherited through social learning usually from mothers to offspring. Successful bear cultures can enhance fitness and resource exploitation benefits. In contrast, some bear cultures related to response to humans and human‐related foods can be maladaptive and result in reduced fitness and direct mortality. In environments with minimal human influence most bear culture has evolved over generations to be beneficial and well adapted to enhance fitness. However, most bears across the world do not live in areas with minimal human influence and in these areas, bear culture is often changed by bear interactions with humans, usually to the detriment of bear survival. We highlight the importance of identifying unique bear cultural traits that allow efficient use of local resources and the value of careful management to preserve these adaptive cultural behaviors. It is also important to select against maladaptive cultural behaviors that are usually related to humans in order to reduce human–bear conflicts and high bear mortality. We use examples from Yellowstone National Park to demonstrate how long‐term management to reduce maladaptive bear cultures related to humans has resulted in healthy bear populations and a low level of human–bear conflict in spite of a high number of Yellowstone National Park visitors in close association with bears.
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Affiliation(s)
- Christopher Servheen
- W.A. Franke College of Forestry and Conservation University of Montana Missoula Montana USA
| | - Kerry A. Gunther
- Bear Management Office Yellowstone Center for Resources Yellowstone National Park Wyoming USA
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3
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Abstract
Culture can be defined as all that is learned from others and is repeatedly transmitted in this way, forming traditions that may be inherited by successive generations. This cultural form of inheritance was once thought specific to humans, but research over the past 70 years has instead revealed it to be widespread in nature, permeating the lives of a diversity of animals, including all major classes of vertebrates. Recent studies suggest that culture's reach may extend also to invertebrates-notably, insects. In the present century, the reach of animal culture has been found to extend across many different behavioral domains and to rest on a suite of social learning processes facilitated by a variety of selective biases that enhance the efficiency and adaptiveness of learning. Far-reaching implications, for disciplines from evolutionary biology to anthropology and conservation policies, are increasingly being explored.
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Affiliation(s)
- Andrew Whiten
- School of Psychology and Neuroscience, University of St Andrews, St Andrews KY16 9JP, UK.
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4
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Sarano F, Girardet J, Sarano V, Vitry H, Preud'homme A, Heuzey R, Garcia-Cegarra AM, Madon B, Delfour F, Glotin H, Adam O, Jung JL. Kin relationships in cultural species of the marine realm: case study of a matrilineal social group of sperm whales off Mauritius island, Indian Ocean. ROYAL SOCIETY OPEN SCIENCE 2021; 8:201794. [PMID: 33972866 PMCID: PMC8074673 DOI: 10.1098/rsos.201794] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2020] [Accepted: 01/11/2021] [Indexed: 05/14/2023]
Abstract
Understanding the organization and dynamics of social groups of marine mammals through the study of kin relationships is particularly challenging. Here, we studied a stable social group of sperm whales off Mauritius, using underwater observations, individual-specific identification, non-invasive sampling and genetic analyses based on mitochondrial sequencing and microsatellite profiling. Twenty-four sperm whales were sampled between 2017 and 2019. All individuals except one adult female shared the same mitochondrial DNA (mtDNA) haplotype-one that is rare in the western Indian Ocean-thus confirming with near certainty the matrilineality of the group. All probable first- and second-degree kin relationships were depicted in the sperm whale social group: 13 first-degree and 27 second-degree relationships were identified. Notably, we highlight the likely case of an unrelated female having been integrated into a social unit, in that she presented a distinct mtDNA haplotype and no close relationships with any members of the group. Investigating the possible matrilineality of sperm whale cultural units (i.e. vocal clans) is the next step in our research programme to elucidate and better apprehend the complex organization of sperm whale social groups.
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Affiliation(s)
| | - Justine Girardet
- Université de Brest, Muséum National d'Histoire Naturelle, CNRS, Sorbonne Université, ISYEB, Brest, France
| | | | - Hugues Vitry
- Marine Megafauna Conservation Organisation, Mauritius
| | | | | | - Ana M. Garcia-Cegarra
- Centro de Investigación de Fauna Marina y Avistamiento de Cetáceos, CIFAMAC, Mejillones, Chile
- Departamento de Ciencias Básicas, Facultad de Ciencias, Universidad Santo Tomás, Antofagasta, Chile
| | - Bénédicte Madon
- Université de Brest, AMURE - Aménagement des Usages des Ressources et des Espaces marins et littoraux - Centre de droit et d'économie de la mer, Plouzané, France
| | - Fabienne Delfour
- Laboratoire d'Ethologie Expérimentale et Comparée EA 4443, Université Paris 13, Sorbonne Paris Cité, Villetaneuse, France
| | - Hervé Glotin
- Toulon University, Aix Marseille Université, CNRS, LIS, DYNI Team, Marseille, France
| | - Olivier Adam
- Sorbonne Université, CNRS, Institut Jean Le Rond d'Alembert, UMR 7190, Paris, France
- Institute of Neurosciences Paris-Saclay, Bioacoustics Team, CNRS UMR 9197, Université Paris Sud, Orsay, France
| | - Jean-Luc Jung
- Université de Brest, Muséum National d'Histoire Naturelle, CNRS, Sorbonne Université, ISYEB, Brest, France
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5
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Kraft S, Pérez-Álvarez MJ, Olavarría C, Poulin E. Global phylogeography and genetic diversity of the long-finned pilot whale Globicephala melas, with new data from the southeastern Pacific. Sci Rep 2020; 10:1769. [PMID: 32019997 PMCID: PMC7000830 DOI: 10.1038/s41598-020-58532-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2019] [Accepted: 01/06/2020] [Indexed: 11/24/2022] Open
Abstract
The matrilineal long-finned pilot whale presents an antitropical distribution and is divided into two subspecies, one in the temperate seas of the Southern Hemisphere and the other restricted to the North Atlantic and Mediterranean. Until now, population genetic and phylogeographic studies have included localities of most of its Northern Hemisphere distribution, while only the southwestern Pacific has been sampled in the Southern Hemisphere. We add new genetic data from the southeastern Pacific to the published sequences. Low mitochondrial and nuclear diversity was encountered in this new area, as previously reported for other localities. Four haplotypes were found with only one new for the species. Fifteen haplotypes were detected in the global dataset, underlining the species’ low diversity. As previously reported, the subspecies shared two haplotypes and presented a strong phylogeographic structure. The extant distribution of this species has been related to dispersal events during the Last Glacial Maximum. Using the genetic data and Approximate Bayesian Calculations, this study supports this historical biogeographic scenario. From a taxonomic perspective, even if genetic analyses do not support the subspecies category, this study endorses the incipient divergence process between hemispheres, thus maintaining their status and addressing them as Demographically Independent Populations is recommended.
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Affiliation(s)
- Sebastián Kraft
- Instituto de Ecología y Biodiversidad, Laboratorio de Ecología Molecular, Departamento de Ciencias Ecológicas, Facultad de Ciencias, Universidad de Chile, Santiago, Chile
| | - MJosé Pérez-Álvarez
- Instituto de Ecología y Biodiversidad, Laboratorio de Ecología Molecular, Departamento de Ciencias Ecológicas, Facultad de Ciencias, Universidad de Chile, Santiago, Chile. .,Centro de Investigación Eutropia, Santiago, Chile. .,Escuela de Medicina Veterinaria, Facultad de Ciencias, Universidad Mayor, Santiago, Chile.
| | - Carlos Olavarría
- Centro de Investigación Eutropia, Santiago, Chile.,Centro de Estudios Avanzados en Zonas Áridas (CEAZA), La Serena, Chile
| | - Elie Poulin
- Instituto de Ecología y Biodiversidad, Laboratorio de Ecología Molecular, Departamento de Ciencias Ecológicas, Facultad de Ciencias, Universidad de Chile, Santiago, Chile
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6
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Whitehead H. Cultural specialization and genetic diversity: Killer whales and beyond. J Theor Biol 2020; 490:110164. [PMID: 31954108 DOI: 10.1016/j.jtbi.2020.110164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2019] [Revised: 01/10/2020] [Accepted: 01/14/2020] [Indexed: 10/25/2022]
Abstract
Culturally-transmitted ecological specialization can reduce niche breadths with demographic and ecological consequences. I use agent-based models, grounded in killer whale biology, to investigate the potential consequences of cultural specialization for genetic diversity. In these models, cultural specialization typically reduces the number of mitochondrial haplotypes, mitochondrial haplotype diversity, mitochondrial nucleotide diversity, and heterozygosity at nuclear loci. The causal route of this decline is mostly indirect, being ascribed to a reduction in absolute population size resulting from cultural specialization. However, small group size exacerbates the decline in genetic diversity, presumably because of increased founder effects at the initiation of each cultural ecotype. These results are concordant with measures of low genetic diversity in the killer whale, although culturally-transmitted ecological specialization alone might not be sufficient to fully account for the species' very low mitochondrial diversity. The process may also operate in other species.
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Affiliation(s)
- Hal Whitehead
- Department of Biology, Dalhousie University, 1355 Oxford St, Halifax, Nova Scotia B3H4R2, Canada.
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7
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Feyrer LJ, Bentzen P, Whitehead H, Paterson IG, Einfeldt A. Evolutionary impacts differ between two exploited populations of northern bottlenose whale ( Hyperoodon ampullatus). Ecol Evol 2019; 9:13567-13584. [PMID: 31871667 PMCID: PMC6912904 DOI: 10.1002/ece3.5813] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Revised: 10/05/2019] [Accepted: 10/10/2019] [Indexed: 01/10/2023] Open
Abstract
Interpretation of conservation status should be informed by an appreciation of genetic diversity, past demography, and overall trends in population size, which contribute to a species' evolutionary potential and resilience to genetic risks. Low genetic diversity can be symptomatic of rapid demographic declines and impose genetic risks to populations, but can also be maintained by natural processes. The northern bottlenose whale Hyperoodon ampullatus has the lowest known mitochondrial diversity of any cetacean and was intensely whaled in the Northwest Atlantic over the last century, but whether exploitation imposed genetic risks that could limit recovery is unknown. We sequenced full mitogenomes and genotyped 37 novel microsatellites for 128 individuals from known areas of abundance in the Scotian Shelf, Northern and Southern Labrador, Davis Strait, and Iceland, and a newly discovered group off Newfoundland. Despite low diversity and shared haplotypes across all regions, both markers supported the Endangered Scotian Shelf population as distinct from the combined northern regions. The genetic affinity of Newfoundland was uncertain, suggesting an area of mixing with no clear population distinction for the region. Demographic reconstruction using mitogenomes suggests that the northern region underwent population expansion following the last glacial maximum, but for the peripheral Scotian Shelf population, a stable demographic trend was followed by a drastic decline over a temporal scale consistent with increasing human activity in the Northwest Atlantic. Low connectivity between the Scotian Shelf and the rest of the Atlantic likely compounded the impact of intensive whaling for this species, potentially imposing genetic risks affecting recovery of this population. We highlight how the combination of historical environmental conditions and modern exploitation of this species has had very different evolutionary impacts on structured populations of northern bottlenose whales across the western North Atlantic.
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Affiliation(s)
| | - Paul Bentzen
- Biology DepartmentDalhousie UniversityHalifaxNSCanada
| | - Hal Whitehead
- Biology DepartmentDalhousie UniversityHalifaxNSCanada
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8
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Rendell L, Cantor M, Gero S, Whitehead H, Mann J. Causes and consequences of female centrality in cetacean societies. Philos Trans R Soc Lond B Biol Sci 2019; 374:20180066. [PMID: 31303160 DOI: 10.1098/rstb.2018.0066] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Cetaceans are fully aquatic predatory mammals that have successfully colonized virtually all marine habitats. Their adaptation to these habitats, so radically different from those of their terrestrial ancestors, can give us comparative insights into the evolution of female roles and kinship in mammalian societies. We provide a review of the diversity of such roles across the Cetacea, which are unified by some key and apparently invariable life-history features. Mothers are uniparous, while paternal care is completely absent as far as we currently know. Maternal input is extensive, lasting months to many years. Hence, female reproductive rates are low, every cetacean calf is a significant investment, and offspring care is central to female fitness. Here strategies diverge, especially between toothed and baleen whales, in terms of mother-calf association and related social structures, which range from ephemeral grouping patterns to stable, multi-level, societies in which social groups are strongly organized around female kinship. Some species exhibit social and/or spatial philopatry in both sexes, a rare phenomenon in vertebrates. Communal care can be vital, especially among deep-diving species, and can be supported by female kinship. Female-based sociality, in its diverse forms, is therefore a prevailing feature of cetacean societies. Beyond the key role in offspring survival, it provides the substrate for significant vertical and horizontal cultural transmission, as well as the only definitive non-human examples of menopause. This article is part of the theme issue 'The evolution of female-biased kinship in humans and other mammals'.
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Affiliation(s)
- Luke Rendell
- 1 Sea Mammal Research Unit, School of Biology, University of St Andrews , St Andrews KY16 9TH , UK
| | - Mauricio Cantor
- 2 Departamento de Ecologia e Zoologia, Universidade Federal de Santa Catarina , Florianópolis 88040-970 , Brazil.,3 Centro de Estudos do Mar, Universidade Federal do Paraná , Pontal do Paraná 83255-000 , Brazil.,4 School of Animal, Plant and Environmental Sciences, University of the Witwatersrand , Johannesburg-Braamfontein , South Africa
| | - Shane Gero
- 5 Department of Zoophysiology, Institute for Bioscience, Aarhus University , Aarhus 8000 , Denmark
| | - Hal Whitehead
- 6 Department of Biology, Dalhousie University , Halifax , Canada B3H 4J1
| | - Janet Mann
- 7 Department of Biology, Georgetown University , Washington, DC 20057 , USA
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9
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Whitehead H, Laland KN, Rendell L, Thorogood R, Whiten A. The reach of gene-culture coevolution in animals. Nat Commun 2019; 10:2405. [PMID: 31160560 PMCID: PMC6546714 DOI: 10.1038/s41467-019-10293-y] [Citation(s) in RCA: 52] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2018] [Accepted: 05/02/2019] [Indexed: 12/26/2022] Open
Abstract
Culture (behaviour based on socially transmitted information) is present in diverse animal species, yet how it interacts with genetic evolution remains largely unexplored. Here, we review the evidence for gene-culture coevolution in animals, especially birds, cetaceans and primates. We describe how culture can relax or intensify selection under different circumstances, create new selection pressures by changing ecology or behaviour, and favour adaptations, including in other species. Finally, we illustrate how, through culturally mediated migration and assortative mating, culture can shape population genetic structure and diversity. This evidence suggests strongly that animal culture plays an important evolutionary role, and we encourage explicit analyses of gene-culture coevolution in nature.
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Affiliation(s)
- Hal Whitehead
- Department of Biology, Dalhousie University, Halifax, B3H 4R2, Canada.
| | - Kevin N Laland
- Centre for Social Learning and Cognitive Evolution, School of Biology, University of St Andrews, St Andrews, KY16 9TF, United Kingdom
| | - Luke Rendell
- Centre for Social Learning and Cognitive Evolution, School of Biology, University of St Andrews, St Andrews, KY16 9TF, United Kingdom
| | - Rose Thorogood
- Department of Zoology, University of Cambridge, Cambridge, CB2 3EJ, United Kingdom
- Helsinki Institute of Life Science, University of Helsinki, Helsinki, 00014, Finland
- Faculty of Biological and Environmental Sciences (Research Program in Organismal & Evolutionary Biology), University of Helsinki, Helsinki, 00014, Finland
| | - Andrew Whiten
- Centre for Social Learning and Cognitive Evolution, School of Psychology and Neuroscience, University of St Andrews, St Andrews, KY16 9JP, United Kingdom
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10
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Richerson PJ. An integrated bayesian theory of phenotypic flexibility. Behav Processes 2019; 161:54-64. [DOI: 10.1016/j.beproc.2018.02.002] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2017] [Revised: 02/02/2018] [Accepted: 02/02/2018] [Indexed: 12/28/2022]
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11
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Filatova OA, Borisova EA, Meschersky IG, Logacheva MD, Kuzkina NV, Shpak OV, Morin PA, Hoyt E. Colonizing the Wild West: Low Diversity of Complete Mitochondrial Genomes in Western North Pacific Killer Whales Suggests a Founder Effect. J Hered 2018; 109:735-743. [PMID: 30053000 DOI: 10.1093/jhered/esy037] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2018] [Accepted: 07/17/2018] [Indexed: 11/13/2022] Open
Abstract
In the North Pacific, fish-eating R-type "resident" and mammal-eating T-type "transient" killer whales do not interbreed and differ in ecology and behavior. Full-length mitochondrial genomes (about 16.4 kbp) were sequenced and assembled for 12 R-type and 14 T-type killer whale samples from different areas of the western North Pacific. All R-type individuals had the same haplotype, previously described for R-type killer whales from both eastern and western North Pacific. However, haplotype diversity of R-type killer whales was much lower in the western North Pacific than in the Aleutian Islands and the eastern North Pacific. T-type whales had 3 different haplotypes, including one previously undescribed. Haplotype diversity of T-type killer whales in the Okhotsk Sea was also much lower than in the Aleutian Islands and the eastern North Pacific. The highest haplotype diversity for both R- and T-type killer whales was observed in the Aleutian Islands. We discuss how the environmental conditions during the last glacial period might have shaped the history of killer whale populations in the North Pacific. Our results suggest the recent colonization or re-colonization of the western North Pacific by small groups of killer whales originating from the central or eastern North Pacific, possibly due to favorable environmental changes after the Last Glacial Maximum.
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Affiliation(s)
- Olga A Filatova
- Department of Vertebrate Zoology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia
| | - Ekaterina A Borisova
- Department of Vertebrate Zoology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia
| | - Ilya G Meschersky
- Molecular Diagnostic Center, A.N. Severtsov Institute of Ecology and Evolution RAS, Moscow, Russia
| | - Maria D Logacheva
- Department of Evolutionary Biochemistry, A.N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia
| | - Nataliia V Kuzkina
- Laboratory of Translational Research and Personalized Medicine, Moscow Institute of Physics and Technology, Dolgoprudny, Moscow Region, Russia
| | - Olga V Shpak
- Laboratory of Behavior and Behavioral Ecology, A.N. Severtsov Institute of Ecology and Evolution RAS, Moscow, Russia
| | - Phillip A Morin
- Southwest Fisheries Science Center, National Marine Fisheries Service, NOAA, La Jolla, CA
| | - Erich Hoyt
- Global Critical Habitat Marine Protected Areas Programme, Whale and Dolphin Conservation, UK
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12
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Zeng TC, Aw AJ, Feldman MW. Cultural hitchhiking and competition between patrilineal kin groups explain the post-Neolithic Y-chromosome bottleneck. Nat Commun 2018; 9:2077. [PMID: 29802241 PMCID: PMC5970157 DOI: 10.1038/s41467-018-04375-6] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2017] [Accepted: 04/24/2018] [Indexed: 01/18/2023] Open
Abstract
In human populations, changes in genetic variation are driven not only by genetic processes, but can also arise from cultural or social changes. An abrupt population bottleneck specific to human males has been inferred across several Old World (Africa, Europe, Asia) populations 5000–7000 BP. Here, bringing together anthropological theory, recent population genomic studies and mathematical models, we propose a sociocultural hypothesis, involving the formation of patrilineal kin groups and intergroup competition among these groups. Our analysis shows that this sociocultural hypothesis can explain the inference of a population bottleneck. We also show that our hypothesis is consistent with current findings from the archaeogenetics of Old World Eurasia, and is important for conceptions of cultural and social evolution in prehistory. A population bottleneck 5000-7000 years ago in human males, but not females, has been inferred across several African, European and Asian populations. Here, Zeng and colleagues synthesize theory and data to suggest that competition among patrilineal kin groups produced the bottleneck pattern.
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Affiliation(s)
- Tian Chen Zeng
- Department of Sociology, Stanford University, Stanford, CA, 94305, USA.,Mathematical and Computational Science Program, Stanford University, Stanford, CA, 94305, USA
| | - Alan J Aw
- Mathematical and Computational Science Program, Stanford University, Stanford, CA, 94305, USA.,Department of Biology, Stanford University, Stanford, CA, USA
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13
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Morin PA, Foote AD, Baker CS, Hancock‐Hanser BL, Kaschner K, Mate BR, Mesnick SL, Pease VL, Rosel PE, Alexander A. Demography or selection on linked cultural traits or genes? Investigating the driver of low mtDNA diversity in the sperm whale using complementary mitochondrial and nuclear genome analyses. Mol Ecol 2018; 27:2604-2619. [DOI: 10.1111/mec.14698] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2018] [Accepted: 03/26/2018] [Indexed: 01/01/2023]
Affiliation(s)
- Phillip A. Morin
- Southwest Fisheries Science Center National Marine Fisheries Service National Oceanic and Atmospheric Administration La Jolla California
| | - Andrew D. Foote
- Molecular Ecology and Fisheries Genetics Laboratory School of Biological Sciences Bangor University Bangor Gwynedd UK
| | - Charles Scott Baker
- Marine Mammal Institute Hatfield Marine Science Center Oregon State University Newport Oregon
- Department of Fisheries and Wildlife College of Agricultural Sciences Corvallis Oregon
| | - Brittany L. Hancock‐Hanser
- Southwest Fisheries Science Center National Marine Fisheries Service National Oceanic and Atmospheric Administration La Jolla California
| | - Kristin Kaschner
- Department of Biometry and Environmental System Analysis Albert‐Ludwigs‐University of Freiburg Freiburg Germany
| | - Bruce R. Mate
- Marine Mammal Institute Hatfield Marine Science Center Oregon State University Newport Oregon
- Department of Fisheries and Wildlife College of Agricultural Sciences Corvallis Oregon
| | - Sarah L. Mesnick
- Southwest Fisheries Science Center National Marine Fisheries Service National Oceanic and Atmospheric Administration La Jolla California
| | - Victoria L. Pease
- Southwest Fisheries Science Center National Marine Fisheries Service National Oceanic and Atmospheric Administration La Jolla California
| | - Patricia E. Rosel
- Southeast Fisheries Science Center National Marine Fisheries Service National Oceanic and Atmospheric Administration Lafayette Louisiana
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14
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Vachon F, Whitehead H, Frasier TR. What factors shape genetic diversity in cetaceans? Ecol Evol 2018; 8:1554-1572. [PMID: 29435232 PMCID: PMC5792597 DOI: 10.1002/ece3.3727] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2017] [Revised: 11/07/2017] [Accepted: 11/20/2017] [Indexed: 01/01/2023] Open
Abstract
Understanding what factors drive patterns of genetic diversity is a central aspect of many biological questions, ranging from the inference of historical demography to assessing the evolutionary potential of a species. However, as a larger number of datasets have become available, it is becoming clear that the relationship between the characteristics of a species and its genetic diversity is more complex than previously assumed. This may be particularly true for cetaceans, due to their relatively long lifespans, long generation times, complex social structures, and extensive ranges. In this study, we used microsatellite and mitochondrial DNA data from a systematic literature review to produce estimates of diversity for both markers across 42 cetacean species. Factors relating to demography, distribution, classification, biology, and behavior were then tested using phylogenetic methods and linear models to assess their relative influence on the genetic diversity of both marker types. The results show that while relative nuclear diversity is correlated with population size, mitochondrial diversity is not. This is particularly relevant given the widespread use of mitochondrial DNA to infer historical demography. Instead, mitochondrial diversity was mostly influenced by the range and social structure of the species. In addition to population size, habitat type (neritic vs. oceanic) had a significant correlation with relative nuclear diversity. Combined, these results show that many often-unconsidered factors are likely influencing patterns of genetic diversity in cetaceans, with implications regarding how to interpret, and what can be inferred from, existing patterns of diversity.
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Affiliation(s)
- Felicia Vachon
- Department of BiologyDalhousie UniversityHalifaxNSCanada
| | - Hal Whitehead
- Department of BiologyDalhousie UniversityHalifaxNSCanada
| | - Timothy R. Frasier
- Department of Biology and Forensic Sciences ProgrammeSaint Mary's UniversityHalifaxNSCanada
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Abstract
Whales and dolphins (Cetacea) have excellent social learning skills as well as a long and strong mother-calf bond. These features produce stable cultures, and, in some species, sympatric groups with different cultures. There is evidence and speculation that this cultural transmission of behavior has affected gene distributions. Culture seems to have driven killer whales into distinct ecotypes, which may be incipient species or subspecies. There are ecotype-specific signals of selection in functional genes that correspond to cultural foraging behavior and habitat use by the different ecotypes. The five species of whale with matrilineal social systems have remarkably low diversity of mtDNA. Cultural hitchhiking, the transmission of functionally neutral genes in parallel with selective cultural traits, is a plausible hypothesis for this low diversity, especially in sperm whales. In killer whales the ecotype divisions, together with founding bottlenecks, selection, and cultural hitchhiking, likely explain the low mtDNA diversity. Several cetacean species show habitat-specific distributions of mtDNA haplotypes, probably the result of mother-offspring cultural transmission of migration routes or destinations. In bottlenose dolphins, remarkable small-scale differences in haplotype distribution result from maternal cultural transmission of foraging methods, and large-scale redistributions of sperm whale cultural clans in the Pacific have likely changed mitochondrial genetic geography. With the acceleration of genomics new results should come fast, but understanding gene-culture coevolution will be hampered by the measured pace of research on the socio-cultural side of cetacean biology.
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Affiliation(s)
- Hal Whitehead
- Department of Biology, Dalhousie University, Halifax, NS, Canada B3H 4R2
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