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Liu Z, Zhang H, Xue F, Niu L, Qi C, Chen W, Zheng J, Wang C. RNA-Seq Insight into the Impact and Mechanisms of Methyl Donor and Glycine Betaine Osmoprotectant on Polyketide Secondary Metabolism in Monascus purpureus M1. J Fungi (Basel) 2025; 11:273. [PMID: 40278094 PMCID: PMC12028682 DOI: 10.3390/jof11040273] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2025] [Revised: 03/24/2025] [Accepted: 03/26/2025] [Indexed: 04/26/2025] Open
Abstract
Glycine betaine (GB) serves as both a methyl donor and osmoprotectant in microorganisms, facilitating growth and enhancing metabolic product yields. While the polyketide metabolites from Monascus purpureus, such as Monascus pigments (MPs) and monacolin K (MK), have been extensively studied, the effects of GB on their production and the underlying molecular mechanisms remain insufficiently explored. In this study, various concentrations of GB were added to Monascus purpureus M1 cultures, followed by RNA sequencing, RT-qPCR, differential gene expression analysis, and functional enrichment to investigate the regulatory impact of GB on polyketide metabolism. Protein-protein interaction network analysis identified key upregulated genes, including RPS15, RPS14, RPS5, NDK1, EGD2, and ATP9, particularly during the later growth phases. GB significantly upregulated genes involved in stress response, secondary metabolism, and polyketide biosynthesis. Scanning electron microscopy, HPLC, and UV-Vis spectrophotometry further confirmed that GB promoted both strain growth and polyketide production, with red pigment and MK production increasing by 120.08% and 93.4%, respectively. These results indicate that GB enhances growth and polyketide metabolism in Monascus purpureus by functioning as both a methyl donor and osmoprotectant, offering new insights into optimizing microbial polyketide production and revealing gene regulatory mechanisms by GB in Monascus purpureus.
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Affiliation(s)
- Zheng Liu
- Key Laboratory of Geriatric Nutrition and Health, Ministry of Education, Beijing Engineering and Technology Research Center of Food Additives, School of Food and Health, Beijing Technology & Business University (BTBU), Beijing 100048, China; (Z.L.); (H.Z.); (F.X.); (W.C.)
| | - Haijing Zhang
- Key Laboratory of Geriatric Nutrition and Health, Ministry of Education, Beijing Engineering and Technology Research Center of Food Additives, School of Food and Health, Beijing Technology & Business University (BTBU), Beijing 100048, China; (Z.L.); (H.Z.); (F.X.); (W.C.)
| | - Furong Xue
- Key Laboratory of Geriatric Nutrition and Health, Ministry of Education, Beijing Engineering and Technology Research Center of Food Additives, School of Food and Health, Beijing Technology & Business University (BTBU), Beijing 100048, China; (Z.L.); (H.Z.); (F.X.); (W.C.)
| | - Lidan Niu
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China;
- Key Laboratory of Condiment Supervision Technology for State Market Regulation, Chongqing Institute for Food and Drug Control, Chongqing 401121, China
| | - Chenchen Qi
- Xinjiang Xinkang Agricultural Development Co., Ltd., Urumqi 830032, China;
| | - Wei Chen
- Key Laboratory of Geriatric Nutrition and Health, Ministry of Education, Beijing Engineering and Technology Research Center of Food Additives, School of Food and Health, Beijing Technology & Business University (BTBU), Beijing 100048, China; (Z.L.); (H.Z.); (F.X.); (W.C.)
| | - Jie Zheng
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China;
| | - Chengtao Wang
- Key Laboratory of Geriatric Nutrition and Health, Ministry of Education, Beijing Engineering and Technology Research Center of Food Additives, School of Food and Health, Beijing Technology & Business University (BTBU), Beijing 100048, China; (Z.L.); (H.Z.); (F.X.); (W.C.)
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Wang Y, Lan T, Wu SH, Ma J, Zou X. A betaine-contained solution reduced cold ischemia damage through inhibiting vacuolar degeneration in livers. Transpl Immunol 2024; 87:102144. [PMID: 39491596 DOI: 10.1016/j.trim.2024.102144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2024] [Revised: 10/30/2024] [Accepted: 11/01/2024] [Indexed: 11/05/2024]
Abstract
A new osmoprotectant-containing multiple saccharide (MS) solution was formulated for this study. The primary objectives were to compare the effects of the MS solution with those of the University of Wisconsin (UW) solution and hypertonic citrate adenine (HCA) solution on liver cold preservation, as well as to investigate the mechanisms underlying osmolarity-induced injury. Rat livers were cold-stored for 18 h at 4 °C using the different solutions and subsequently subjected to 2 h of normothermic machine perfusion (NMP) for functional assessment. The livers were categorized into four groups: HCA, UW, MS, and a control group. Liver function and histological changes were evaluated using biochemical markers such as lactate dehydrogenase (LDH), alongside histopathological analysis. Additionally, the expression of aquaporin 9 (AQP9) and hydrogen peroxide (H2O2) in hepatocytes was examined. Liver damage was significantly reduced in the UW and MS groups (p < 0.05). Histopathological analysis revealed a decrease in hepatic apoptosis and injury scores in the MS group compared to the HCA group (p < 0.05). No significant differences in liver function changes were observed between the MS and UW groups. Furthermore, examination of liver tissue showed increased H2O2 fluorescence intensity and decreased AQP9 protein levels in livers exhibiting vacuolar degeneration. In conclusion, the MS solution demonstrated superior effectiveness in preserving the liver during cold storage by inhibiting vacuolar degeneration caused by intracellular H2O2 accumulation.
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Affiliation(s)
- Yu Wang
- Department of Chemistry, College of Chemistry, Nankai University, Tianjin 300071, China
| | - Tingting Lan
- Research Institute of Transplant Medicine, Tianjin First Central Hospital, School of Medicine, Nankai University, Tianjin 300190, China
| | - Shao-Hua Wu
- Clinical Laboratory, Tianjin First Central Hospital, School of Medicine, Nankai University, Tianjin 300192, China
| | - Jiangong Ma
- Department of Chemistry and Key Laboratory of Advanced Energy Materials Chemistry (MOE), College of Chemistry, Nankai University, Tianjin 300071, China
| | - Xunfeng Zou
- Department of General Surgery, Tianjin First Central Hospital, School of Medicine, Nankai University, Tianjin 300192, China.
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Raju R, Bryant SJ, Wilkinson BL, Bryant G. The need for novel cryoprotectants and cryopreservation protocols: Insights into the importance of biophysical investigation and cell permeability. Biochim Biophys Acta Gen Subj 2020; 1865:129749. [PMID: 32980500 DOI: 10.1016/j.bbagen.2020.129749] [Citation(s) in RCA: 59] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Revised: 09/16/2020] [Accepted: 09/22/2020] [Indexed: 12/31/2022]
Abstract
BACKGROUND Cryopreservation is a key method of preservation of biological material for both medical treatments and conservation of endangered species. In order to avoid cellular damage, cryopreservation relies on the addition of a suitable cryoprotective agent (CPA). However, the toxicity of CPAs is a serious concern and often requires rapid removal on thawing which is time consuming and expensive. SCOPE OF REVIEW The principles of Cryopreservation are reviewed and recent advances in cryopreservation methods and new CPAs are described. The importance of understanding key biophysical properties to assess the cryoprotective potential of new non-toxic compounds is discussed. MAJOR CONCLUSIONS Knowing the biophysical properties of a particular cell type is crucial for developing new cryopreservation protocols. Similarly, understanding how potential CPAs interact with cells is key for optimising protocols. For example, cells with a large osmotically inactive volume may require slower addition of CPAs. Similarly, a cell with low permeability may require a longer incubation time with the CPA to allow adequate penetration. Measuring these properties allows efficient optimisation of cryopreservation protocols. GENERAL SIGNIFICANCE Understanding the interplay between cells and biophysical properties is important not just for developing new, and better optimised, cryopreservation protocols, but also for broader research into topics such as dehydration and desiccation tolerance, chilling and heat stress, as well as membrane structure and function.
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Affiliation(s)
- Rekha Raju
- School of Science, RMIT University, Melbourne, Victoria 3001, Australia
| | - Saffron J Bryant
- School of Science, RMIT University, Melbourne, Victoria 3001, Australia.
| | - Brendan L Wilkinson
- School of Science and Technology, University of New England, Armidale, NSW 2351, Australia
| | - Gary Bryant
- School of Science, RMIT University, Melbourne, Victoria 3001, Australia.
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Betaine supplementation improved l-threonine fermentation of Escherichia coli THRD by upregulating zwf (glucose-6-phosphate dehydrogenase) expression. ELECTRON J BIOTECHN 2019. [DOI: 10.1016/j.ejbt.2019.03.004] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
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Li Y, He Q, Geng Z, Du S, Deng Z, Hasi E. NMR-based metabolomic profiling of Peganum harmala L. reveals dynamic variations between different growth stages. ROYAL SOCIETY OPEN SCIENCE 2018; 5:171722. [PMID: 30109044 PMCID: PMC6083650 DOI: 10.1098/rsos.171722] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2017] [Accepted: 06/20/2018] [Indexed: 05/19/2023]
Abstract
Xerophytes play an active role in preventing soil denudation and desertification in arid and semi-arid areas. Peganum harmala L. (Zygophyllaceae family), a seasonally growing, poisonous and drought-tolerant plant, is widely distributed in the Xinjiang Uygur Autonomous Region and used as a traditional herbal medicine as well as, in winter, a fodder source. Previous research has focused on the pharmacological activity of isolated compounds and stress responses to growth environments. However, the metabolic profile of P. harmala and variations in its metabolites, including medicinally active and stress resistance components, have not been illustrated during different growth stages. Here, we collected plant samples in May, August, October and December. We determined the metabolic composition of methanol extracts using NMR spectroscopy, and comparisons of four growth stages were accomplished by applying statistical analysis. The results showed that vasicine, choline and sucrose were significantly elevated in samples harvested in May. Significantly higher amounts of betaine, lysine, 4-hydroxyisoleucine and proline were found in samples collected in August than in samples collected in other months, and the concentrations of phosphorylcholine, glucose, acetic acid and vasicinone were highest in December. The relationships between differential biomarkers and plant physiological states affected by diverse growth environmental factors were discussed. Our result deepened the understanding of metabolic mechanisms in plant development and confirmed the advantage of using NMR-based metabolomic treatments in quality evaluation when P. harmala is used for different purposes.
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Affiliation(s)
- Yinping Li
- College of Chemistry, Beijing Normal University, Beijing 100875, China
- College of Chemistry and Chemical Engineering, Xinjiang Normal University, Xinjiang 830054, China
| | - Qing He
- School of Chemical Engineering and Technology, Tianjin University, Tianjin 300350, China
| | - Zhufeng Geng
- Analytic and Testing Center, Beijing Normal University, Beijing 100875, China
- State Key Laboratory of Earth Surface Processes and Resource Ecology, Beijing Normal University, Beijing 100875, China
| | - Shushan Du
- State Key Laboratory of Earth Surface Processes and Resource Ecology, Beijing Normal University, Beijing 100875, China
| | - Zhiwei Deng
- Analytic and Testing Center, Beijing Normal University, Beijing 100875, China
- Authors for correspondence: Zhiwei Deng e-mail:
| | - Eerdun Hasi
- College of Resources Science & Technology, Beijing Normal University, Beijing 100875, China
- Authors for correspondence: Eerdun Hasi e-mail:
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Sehata S, Nakagawa Y, Genjima R, Koumoto K. Quick Activation/Stabilization of a α-Glucosidase-catalyzed Hydrolysis Reaction by Addition of a Betaine-type Metabolite Analogue. CHEM LETT 2016. [DOI: 10.1246/cl.160567] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Zou H, Chen N, Shi M, Xian M, Song Y, Liu J. The metabolism and biotechnological application of betaine in microorganism. Appl Microbiol Biotechnol 2016; 100:3865-76. [PMID: 27005411 DOI: 10.1007/s00253-016-7462-3] [Citation(s) in RCA: 58] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2016] [Revised: 03/08/2016] [Accepted: 03/09/2016] [Indexed: 11/29/2022]
Abstract
Glycine betaine (betaine) is widely distributed in nature and can be found in many microorganisms, including bacteria, archaea, and fungi. Due to its particular functions, many microorganisms utilize betaine as a functional chemical and have evolved different metabolic pathways for the biosynthesis and catabolism of betaine. As in animals and plants, the principle role of betaine is to protect microbial cells against drought, osmotic stress, and temperature stress. In addition, the role of betaine in methyl group metabolism has been observed in a variety of microorganisms. Recent studies have shown that betaine supplementation can improve the performance of microbial strains used for the fermentation of lactate, ethanol, lysine, pyruvate, and vitamin B12, during which betaine can act as stress protectant or methyl donor for the biosynthesis of structurally complex compounds. In this review, we summarize the transport, synthesis, catabolism, and functions of betaine in microorganisms and discuss potential engineering strategies that employ betaine as a methyl donor for the biosynthesis of complex secondary metabolites such as a variety of vitamins, coenzymes, and antibiotics. In conclusion, the biocompatibility, C/N ratio, abundance, and comprehensive metabolic information of betaine collectively indicate that this molecule has great potential for broad applications in microbial biotechnology.
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Affiliation(s)
- Huibin Zou
- College of Chemical Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China. .,CAS Key Laboratory of Bio-based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China.
| | - Ningning Chen
- College of Chemical Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China
| | - Mengxun Shi
- College of Chemical Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China
| | - Mo Xian
- CAS Key Laboratory of Bio-based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China
| | - Yimin Song
- College of Chemical Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China
| | - Junhong Liu
- College of Chemical Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China
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