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Garcia Cerqueira EM, de Medeiros RE, da Silva Fiorin F, de Arújo E Silva M, Hypolito Lima R, Azevedo Dantas AFO, Rodrigues AC, Delisle-Rodriguez D. Local field potential-based brain-machine interface to inhibit epileptic seizures by spinal cord electrical stimulation. Biomed Phys Eng Express 2024; 11:015016. [PMID: 39530641 DOI: 10.1088/2057-1976/ad9155] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 11/12/2024] [Indexed: 11/16/2024]
Abstract
Objective.This study proposes a closed-loop brain-machine interface (BMI) based on spinal cord stimulation to inhibit epileptic seizures, applying a semi-supervised machine learning approach that learns from Local Field Potential (LFP) patterns acquired on the pre-ictal (preceding the seizure) condition.Approach.LFP epochs from the hippocampus and motor cortex are band-pass filtered from 1 to 13 Hz, to obtain the time-frequency representation using the continuous Wavelet transform, and successively calculate the phase lock values (PLV). As a novelty, theZ-score-based PLV normalization using both modifiedk-means and Davies-Bouldin's measure for clustering is proposed here. Consequently, a generic seizure's detector is calibrated for detecting seizures on the normalized PLV, and enables the spinal cord stimulation for periods of 30 s in a closed-loop, while the BMI system detects seizure events. To calibrate the proposed BMI, a dataset with LFP signals recorded on five Wistar rats during basal state and epileptic crisis was used. The epileptic crisis was induced by injecting pentylenetetrazol (PTZ). Afterwards, two experiments without/with our BMI were carried out, inducing epileptic crisis by PTZ in Wistar rats.Main results.Stronger seizure events of high LFP amplitudes and long time periods were observed in the rat, when the BMI system was not used. In contrast, short-time seizure events of relative low intensity were observed in the rat, using the proposed BMI. The proposed system detected on unseen data the synchronized seizure activity in the hippocampus and motor cortex, provided stimulation appropriately, and consequently decreased seizure symptoms.Significance.Low-frequency LFP signals from the hippocampus and motor cortex, and cord spinal stimulation can be used to develop accurate closed-loop BMIs for early epileptic seizures inhibition, as an alternative treatment.
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Affiliation(s)
- Erika Maria Garcia Cerqueira
- Edmond and Lily Safra International Institute of Neurosciences, Santos Dumont Institute, 59288-899 Macaiba, Brazil
| | - Raquel Emanuela de Medeiros
- Edmond and Lily Safra International Institute of Neurosciences, Santos Dumont Institute, 59288-899 Macaiba, Brazil
| | - Fernando da Silva Fiorin
- Edmond and Lily Safra International Institute of Neurosciences, Santos Dumont Institute, 59288-899 Macaiba, Brazil
| | - Mariane de Arújo E Silva
- Edmond and Lily Safra International Institute of Neurosciences, Santos Dumont Institute, 59288-899 Macaiba, Brazil
| | - Ramón Hypolito Lima
- Edmond and Lily Safra International Institute of Neurosciences, Santos Dumont Institute, 59288-899 Macaiba, Brazil
| | | | - Abner Cardoso Rodrigues
- Edmond and Lily Safra International Institute of Neurosciences, Santos Dumont Institute, 59288-899 Macaiba, Brazil
| | - Denis Delisle-Rodriguez
- Edmond and Lily Safra International Institute of Neurosciences, Santos Dumont Institute, 59288-899 Macaiba, Brazil
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Kong G, Ma S, Zhao W, Wang H, Fu Q, Wang J. A novel method for optimizing epilepsy detection features through multi-domain feature fusion and selection. Front Comput Neurosci 2024; 18:1416838. [PMID: 39629143 PMCID: PMC11612629 DOI: 10.3389/fncom.2024.1416838] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2024] [Accepted: 10/28/2024] [Indexed: 12/07/2024] Open
Abstract
Background The methods used to detect epileptic seizures using electroencephalogram (EEG) signals suffer from poor accuracy in feature selection and high redundancy. This problem is addressed through the use of a novel multi-domain feature fusion and selection method (PMPSO). Method Discrete Wavelet Transforms (DWT) and Welch are used initially to extract features from different domains, including frequency domain, time-frequency domain, and non-linear domain. The first step in the detection process is to extract important features from different domains, such as frequency domain, time-frequency domain, and non-linear domain, using methods such as Discrete Wavelet Transform (DWT) and Welch. To extract features strongly correlated with epileptic classification detection, an improved particle swarm optimization (PSO) algorithm and Pearson correlation analysis are combined. Finally, Support Vector Machines (SVM), Artificial Neural Networks (ANN), Random Forest (RF) and XGBoost classifiers are used to construct epileptic seizure detection models based on the optimized detection features. Result According to experimental results, the proposed method achieves 99.32% accuracy, 99.64% specificity, 99.29% sensitivity, and 99.32% score, respectively. Conclusion The detection performance of the three classifiers is compared using 10-fold cross-validation. Surpassing other methods in detection accuracy. Consequently, this optimized method for epilepsy seizure detection enhances the diagnostic accuracy of epilepsy seizures.
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Affiliation(s)
- Guanqing Kong
- Health and Medical Big Data Laboratory, Linyi People's Hospital, Linyi, China
- Shandong Open Laboratory of Data Innovation Application, Linyi People's Hospital Health and Medical Big Data Center, Linyi, China
| | - Shuang Ma
- Shandong Open Laboratory of Data Innovation Application, Linyi People's Hospital Health and Medical Big Data Center, Linyi, China
- School of Information Science and Engineering, Linyi University, Linyi, China
| | - Wei Zhao
- Health and Medical Big Data Laboratory, Linyi People's Hospital, Linyi, China
- Shandong Open Laboratory of Data Innovation Application, Linyi People's Hospital Health and Medical Big Data Center, Linyi, China
| | - Haifeng Wang
- Shandong Open Laboratory of Data Innovation Application, Linyi People's Hospital Health and Medical Big Data Center, Linyi, China
- School of Information Science and Engineering, Linyi University, Linyi, China
| | - Qingxi Fu
- Health and Medical Big Data Laboratory, Linyi People's Hospital, Linyi, China
- Shandong Open Laboratory of Data Innovation Application, Linyi People's Hospital Health and Medical Big Data Center, Linyi, China
| | - Jiuru Wang
- School of Information Science and Engineering, Linyi University, Linyi, China
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3
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Shi Y, Tang S, Li Y, He Z, Tang S, Wang R, Zheng W, Chen Z, Zhou Y. Continual learning for seizure prediction via memory projection strategy. Comput Biol Med 2024; 181:109028. [PMID: 39173485 DOI: 10.1016/j.compbiomed.2024.109028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2024] [Revised: 06/30/2024] [Accepted: 08/12/2024] [Indexed: 08/24/2024]
Abstract
Despite extensive algorithms for epilepsy prediction via machine learning, most models are tailored for offline scenarios and cannot handle actual scenarios where data changes over time. Catastrophic forgetting(CF) for learned electroencephalogram(EEG) data occurs when EEG changes dynamically in the clinical setting. This paper implements a continual learning(CL) strategy Memory Projection(MP) for epilepsy prediction, which can be combined with other algorithms to avoid CF. Such a strategy enables the model to learn EEG data from each patient in dynamic subspaces with weak correlation layer by layer to minimize interference and promote knowledge transfer. Regularization Loss Reconstruction Algorithm and Matrix Dimensionality Reduction Algorithm are introduced into the core of MP. Experimental results show that MP exhibits excellent performance and low forgetting rates in sequential learning of seizure prediction. The forgetting rate of accuracy and sensitivity under multiple experiments are below 5%. When learning from multi-center datasets, the forgetting rates for accuracy and sensitivity decrease to 0.65% and 1.86%, making it comparable to state-of-the-art CL strategies. Through ablation experiments, we have analyzed that MP can operate with minimal storage and computational cost, which demonstrates practical potential for seizure prediction in clinical scenarios.
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Affiliation(s)
- Yufei Shi
- Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, 510080, Guangdong, China
| | - Shishi Tang
- Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, 510080, Guangdong, China
| | - Yuxuan Li
- Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, 510080, Guangdong, China
| | - Zhipeng He
- Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, 510080, Guangdong, China
| | - Shengsheng Tang
- Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, 510080, Guangdong, China
| | - Ruixuan Wang
- School of Computer Science and Engineering, Sun Yat-sen University, Guangzhou, 510006, Guangdong, China
| | - Weishi Zheng
- School of Computer Science and Engineering, Sun Yat-sen University, Guangzhou, 510006, Guangdong, China
| | - Ziyi Chen
- The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, Guangdong, China
| | - Yi Zhou
- Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, 510080, Guangdong, China.
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Sun C, Xu C, Li H, Bo H, Ma L, Li H. A novel multi-feature fusion attention neural network for the recognition of epileptic EEG signals. Front Comput Neurosci 2024; 18:1393122. [PMID: 38962654 PMCID: PMC11219577 DOI: 10.3389/fncom.2024.1393122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Accepted: 05/20/2024] [Indexed: 07/05/2024] Open
Abstract
Epilepsy is a common chronic brain disorder. Detecting epilepsy by observing electroencephalography (EEG) is the main method neurologists use, but this method is time-consuming. EEG signals are non-stationary, nonlinear, and often highly noisy, so it remains challenging to recognize epileptic EEG signals more accurately and automatically. This paper proposes a novel classification system of epileptic EEG signals for single-channel EEG based on the attention network that integrates time-frequency and nonlinear dynamic features. The proposed system has three novel modules. The first module constructs the Hilbert spectrum (HS) with high time-frequency resolution into a two-channel parallel convolutional network. The time-frequency features are fully extracted by complementing the high-dimensional features of the two branches. The second module constructs a grayscale recurrence plot (GRP) that contains more nonlinear dynamic features than traditional RP, fed into the residual-connected convolution module for effective learning of nonlinear dynamic features. The third module is the feature fusion module based on a self-attention mechanism to assign optimal weights to different types of features and further enhance the information extraction capability of the system. Therefore, the system is named HG-SANet. The results of several classification tasks on the Bonn EEG database and the Bern-Barcelona EEG database show that the HG-SANet can effectively capture the contribution degree of the extracted features from different domains, significantly enhance the expression ability of the model, and improve the accuracy of the recognition of epileptic EEG signals. The HG-SANet can improve the diagnosis and treatment efficiency of epilepsy and has broad application prospects in the fields of brain disease diagnosis.
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Affiliation(s)
- Congshan Sun
- Faculty of Computing, Harbin Institute of Technology, Harbin, China
| | - Cong Xu
- Faculty of Computing, Harbin Institute of Technology, Harbin, China
| | - Hongwei Li
- Faculty of Computing, Harbin Institute of Technology, Harbin, China
| | - Hongjian Bo
- Shenzhen Academy of Aerospace Technology, Shenzhen, China
| | - Lin Ma
- Faculty of Computing, Harbin Institute of Technology, Harbin, China
| | - Haifeng Li
- Faculty of Computing, Harbin Institute of Technology, Harbin, China
- Shenzhen Academy of Aerospace Technology, Shenzhen, China
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Jamil M, Aziz MZ, Yu X. Exploring the potential of pretrained CNNs and time-frequency methods for accurate epileptic EEG classification: a comparative study. Biomed Phys Eng Express 2024; 10:045023. [PMID: 38599183 DOI: 10.1088/2057-1976/ad3cde] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Accepted: 04/10/2024] [Indexed: 04/12/2024]
Abstract
Prompt diagnosis of epilepsy relies on accurate classification of automated electroencephalogram (EEG) signals. Several approaches have been developed to characterize epileptic EEG data; however, none of them have exploited time-frequency data to evaluate the effect of tweaking parameters in pretrained frameworks for EEG data classification. This study compares the performance of several pretrained convolutional neural networks (CNNs) namely, AlexNet, GoogLeNet, MobileNetV2, ResNet-18 and SqueezeNet for the localization of epilepsy EEG data using various time-frequency data representation algorithms. Continuous wavelet transform (CWT), empirical Fourier decomposition (EFD), empirical mode decomposition (EMD), empirical wavelet transform (EWT), and variational mode decomposition (VMD) were exploited for the acquisition of 2D scalograms from 1D data. The research evaluates the effect of multiple factors, including noisy versus denoised scalograms, different optimizers, learning rates, single versus dual channels, model size, and computational time consumption. The benchmark Bern-Barcelona EEG dataset is used for testing purpose. Results obtained show that the combination of MobileNetV2, Continuous Wavelet Transform (CWT) and Adam optimizer at a learning rate of 10-4, coupled with dual-data channels, provides the best performance metrics. Specifically, these parameters result in optimal sensitivity, specificity, f1-score, and classification accuracy, with respective values of 96.06%, 96.15%, 96.08%, and 96.10%. To further corroborate the efficacy of opted pretrained models on exploited Signal Decomposition (SD) algorithms, the classifiers are also being simulated on Temple University database at pinnacle modeling composition. A similar pattern in the outcome readily validate the findings of our study and robustness of deep learning models on epilepsy EEG scalograms.The conclusions drawn emphasize the potential of pretrained CNN-based models to create a robust, automated system for diagnosing epileptiform. Furthermore, the study offers insights into the effectiveness of varying time-frequency techniques and classifier parameters for classifying epileptic EEG data.
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Affiliation(s)
- Mudasir Jamil
- School of Automation, Northwestern Polytechnical University, Xi'an, 710000, People's Republic of China
| | - Muhammad Zulkifal Aziz
- School of Automation, Northwestern Polytechnical University, Xi'an, 710000, People's Republic of China
| | - Xiaojun Yu
- School of Automation, Northwestern Polytechnical University, Xi'an, 710000, People's Republic of China
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6
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Niazi M, Shankayi Z, Asadi MM, Hasanalifard M, Zahiri A, Bahrami F. Electrophysiological analysis of ENG signals in patients with Covid-19. IBRO Neurosci Rep 2023; 15:151-157. [PMID: 37664820 PMCID: PMC10470297 DOI: 10.1016/j.ibneur.2023.08.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Accepted: 08/09/2023] [Indexed: 09/05/2023] Open
Abstract
Background Currently, there is an increasing number of patients reporting dizziness, which has resulted in a positive COVID-19 PCR test. In this paper, we analyzed the ENG signals recorded from patients with a positive COVID-19 PCR test. Methods In this paper, both linear and nonlinear analyses of time series were employed to determine the regularity and complexity of a recorded ENG signal. Results The Wilcoxon rank-sum test indicated that the COVID-19 and non-COVID groups have significant differences based on different extracted features. Various machine learning methods including Linear Discriminant Analysis (LDA), Naïve Base (NB), K-nearest Neighbours (KNN), and Support Vector Machines (SVM) were used to classify COVID-19 and non-COVID groups. The best accuracy, precision and FCR achieved by SVM are 86%, 91% and 0.13. Conclusion In this study, ENG signals were recorded from COVID-19 and control groups. Linear and non-linear features were extracted from the recorded signals to identify significantly different features. Subjects were classified based on SVM and different classifiers. The SVM (polynomial kernel) classifier showed the best result. The proposed method had not been used for the classification of COVID-19 and non-COVID-19 subjects before. This work helps other researchers conduct more research on the development of machine learning methods to diagnose the COVID-19 virus using ENG and other physiological signals.
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Affiliation(s)
- Mehdi Niazi
- Neuroscience Research Centre, Baqiyatallah University of Medical Sciences, Tehran, Iran
- Department of Physiology and Medical Physics, School of Medicine, Baqiyatallah University of Medical Sciences, Tehran, Iran
| | - Zeinab Shankayi
- Neuroscience Research Centre, Baqiyatallah University of Medical Sciences, Tehran, Iran
- Department of Physiology and Medical Physics, School of Medicine, Baqiyatallah University of Medical Sciences, Tehran, Iran
| | - Mohammad Mahdi Asadi
- Baqiyatallah University of Medical Sciences, Students’ Research Committee, Tehran, Iran
| | - Mahdieh Hasanalifard
- New Hearing Technologies Research Center, Clinical Sciences Institute, Baqiyatallah University of Medical Sciences, Tehran, Iran
| | - Ali Zahiri
- Baqiyatallah University of Medical Sciences, Students’ Research Committee, Tehran, Iran
| | - Farideh Bahrami
- Neuroscience Research Centre, Baqiyatallah University of Medical Sciences, Tehran, Iran
- Department of Physiology and Medical Physics, School of Medicine, Baqiyatallah University of Medical Sciences, Tehran, Iran
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Effective Epileptic Seizure Detection by Classifying Focal and Non-focal EEG Signals using Human Learning Optimization-based Hidden Markov Model. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104682] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
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8
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Epileptic seizure focus detection from interictal electroencephalogram: a survey. Cogn Neurodyn 2023; 17:1-23. [PMID: 36704629 PMCID: PMC9871145 DOI: 10.1007/s11571-022-09816-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2021] [Revised: 04/15/2022] [Accepted: 04/21/2022] [Indexed: 01/29/2023] Open
Abstract
Electroencephalogram (EEG) is one of most effective clinical diagnosis modalities for the localization of epileptic focus. Most current AI solutions use this modality to analyze the EEG signals in an automated manner to identify the epileptic seizure focus. To develop AI system for identifying the epileptic focus, there are many recently-published AI solutions based on biomarkers or statistic features that utilize interictal EEGs. In this review, we survey these solutions and find that they can be divided into three main categories: (i) those that use of biomarkers in EEG signals, including high-frequency oscillation, phase-amplitude coupling, and interictal epileptiform discharges, (ii) others that utilize feature-extraction methods, and (iii) solutions based upon neural networks (an end-to-end approach). We provide a detailed description of seizure focus with clinical diagnosis methods, a summary of the public datasets that seek to reduce the research gap in epilepsy, recent novel performance evaluation criteria used to evaluate the AI systems, and guidelines on when and how to use them. This review also suggests a number of future research challenges that must be overcome in order to design more efficient computer-aided solutions to epilepsy focus detection.
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9
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Amiri M, Aghaeinia H, Amindavar HR. Automatic epileptic seizure detection in EEG signals using sparse common spatial pattern and adaptive short-time Fourier transform-based synchrosqueezing transform. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2022.104022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
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10
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Comparisons of deep learning and machine learning while using text mining methods to identify suicide attempts of patients with mood disorders. J Affect Disord 2022; 317:107-113. [PMID: 36029873 DOI: 10.1016/j.jad.2022.08.054] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Revised: 08/05/2022] [Accepted: 08/20/2022] [Indexed: 11/23/2022]
Abstract
BACKGROUND Suicide attempt is one of the most severe consequences for patients with mood disorders. This study aimed to perform deep learning and machine learning while using text mining to identify patients with suicide attempts and to compare their effectiveness. METHODS A total of 13,100 patients with mood disorders were selected. Two traditional text mining methods, logistic regression and Support vector machine (SVM), and one deep learning model (Convolutional neural network, CNN) were adopted to perform overall analysis and gender-specific subgroup analysis of patients to identify suicide attempts. The classification effectiveness of these models was evaluated by accuracy, F1-value, precision, recall, and the area under Receiver operator characteristic curve (ROC). RESULTS CNN's results were greater than the other two for all indicators except recall which was slightly smaller than SVM in male subgroup analysis. The accuracy values of the CNN were 98.4 %, 98.2 %, and 98.5 % in the overall analysis and the subgroup analysis for males and females, respectively. The results of McNemar's test showed that CNN and SVM models' predictions were statistically different from the logistic regression model's predictions in the overall analysis and the subgroup analysis for females (P < 0.050). LIMITATIONS A fixed number of features were selected based on document frequency to train models; this was a single-site study. CONCLUSIONS CNN model was a better way to detect suicide attempts in patients with mood disorders prior to hospital admission, saving time and resources in recognizing high-risk patients and preventing suicide.
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11
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Wang Y, Li Z, Zhang Y, Long Y, Xie X, Wu T. Classification of partial seizures based on functional connectivity: A MEG study with support vector machine. Front Neuroinform 2022; 16:934480. [PMID: 36059865 PMCID: PMC9435583 DOI: 10.3389/fninf.2022.934480] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Accepted: 06/27/2022] [Indexed: 11/22/2022] Open
Abstract
Temporal lobe epilepsy (TLE) is a chronic neurological disorder that is divided into two subtypes, complex partial seizures (CPS) and simple partial seizures (SPS), based on clinical phenotypes. Revealing differences among the functional networks of different types of TLE can lead to a better understanding of the symbology of epilepsy. Whereas Although most studies had focused on differences between epileptic patients and healthy controls, the neural mechanisms behind the differences in clinical representations of CPS and SPS were unclear. In the context of the era of precision, medicine makes precise classification of CPS and SPS, which is crucial. To address the above issues, we aimed to investigate the functional network differences between CPS and SPS by constructing support vector machine (SVM) models. They mainly include magnetoencephalography (MEG) data acquisition and processing, construction of functional connectivity matrix of the brain network, and the use of SVM to identify differences in the resting state functional connectivity (RSFC). The obtained results showed that classification was effective and accuracy could be up to 82.69% (training) and 81.37% (test). The differences in functional connectivity between CPS and SPS were smaller in temporal and insula. The differences between the two groups were concentrated in the parietal, occipital, frontal, and limbic systems. Loss of consciousness and behavioral disturbances in patients with CPS might be caused by abnormal functional connectivity in extratemporal regions produced by post-epileptic discharges. This study not only contributed to the understanding of the cognitive-behavioral comorbidity of epilepsy but also improved the accuracy of epilepsy classification.
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Affiliation(s)
- Yingwei Wang
- Department of Radiology, Affiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, China
| | - Zhongjie Li
- College of Intelligence and Computing, Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin University, Tianjin, China
| | - Yujin Zhang
- National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, Beijing, China
- Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing, China
| | - Yingming Long
- Department of Radiology, Affiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, China
| | - Xinyan Xie
- Department of Radiology, Affiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, China
| | - Ting Wu
- Department of Radiology, Affiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, China
- Department of Magnetoencephalography, Nanjing Brain Hospital, Affiliated to Nanjing Medical University, Nanjing, China
- *Correspondence: Ting Wu
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12
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Yi H. Efficient machine learning algorithm for electroencephalogram modeling in brain–computer interfaces. Neural Comput Appl 2022. [DOI: 10.1007/s00521-020-04861-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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13
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Zhou J, Liu L, Leng Y, Yang Y, Gao B, Jiang Z, Nie W, Yuan Q. Both Cross-Patient and Patient-Specific Seizure Detection Based on Self-Organizing Fuzzy Logic. Int J Neural Syst 2022; 32:2250017. [DOI: 10.1142/s0129065722500174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Automatic epilepsy detection is of great significance for the diagnosis and treatment of patients. Most detection methods are based on patient-specific models and have achieved good results. However, in practice, new patients do not have their own previous EEG data and therefore cannot be initially diagnosed. If the EEG data of other patients can be used to achieve cross-patient detection, and cross-patient and patient-specific experiments can be combined at the same time, this method will be more widely used. In this work, an EEG classification model based on a self-organizing fuzzy logic (SOF) classifier is proposed for both cross-patient and patient-specific seizure detection. After preprocessing, the features of the original EEG signal are extracted and sent to the SOF classifier. This classification model is free from predefined parameters or a prior assumption regarding the EEG data generation model and only stores the key meta-parameters in memory. Therefore, it is very suitable for large-scale EEG signals in cross-patient detection. Selecting different granularity and classification distance in two different experiments after post-processing will achieve the best results. Experiments were conducted using a long-term continuous scalp EEG database and the [Formula: see text]-mean of cross-patient and patient-specific detection reached 83.35% and 92.04%, respectively. A comparison with other methods shows that there is greater performance and generalizability with this method.
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Affiliation(s)
- Jiazheng Zhou
- Shandong Province Key Laboratory of Medical, Physics and Image Processing Technology, School of Physics and Electronics, Shandong, Normal University, Jinan 250358, P. R. China
| | - Li Liu
- Shandong Province Key Laboratory of Medical, Physics and Image Processing Technology, School of Physics and Electronics, Shandong, Normal University, Jinan 250358, P. R. China
| | - Yan Leng
- Shandong Province Key Laboratory of Medical, Physics and Image Processing Technology, School of Physics and Electronics, Shandong, Normal University, Jinan 250358, P. R. China
| | - Yuying Yang
- Shandong Province Key Laboratory of Medical, Physics and Image Processing Technology, School of Physics and Electronics, Shandong, Normal University, Jinan 250358, P. R. China
| | - Bin Gao
- Shandong Province Key Laboratory of Medical, Physics and Image Processing Technology, School of Physics and Electronics, Shandong, Normal University, Jinan 250358, P. R. China
| | - Zonghong Jiang
- College of Resources and Environment Engineering, Guizhou University, Guiyang 550025, P. R. China
| | - Weiwei Nie
- The First Affiliated Hospital of Shandong, First Medical University, Jinan 250014, P. R. China
| | - Qi Yuan
- Shandong Province Key Laboratory of Medical, Physics and Image Processing Technology, School of Physics and Electronics, Shandong, Normal University, Jinan 250358, P. R. China
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14
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Wen Y, Zhang Y, Wen L, Cao H, Ai G, Gu M, Wang P, Chen H. A 65nm/0.448 mW EEG processor with parallel architecture SVM and lifting wavelet transform for high-performance and low-power epilepsy detection. Comput Biol Med 2022; 144:105366. [PMID: 35305503 DOI: 10.1016/j.compbiomed.2022.105366] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Revised: 02/25/2022] [Accepted: 02/28/2022] [Indexed: 11/30/2022]
Abstract
In recent years, low-power and wearable biomedical testing devices have emerged as a key answer to the challenges associated with epilepsy disorders, which are prone to crises and require prolonged monitoring. The feature vector of the electroencephalographic (EEG) signal was extracted using the lifting wavelet transform algorithm, and the hardware of the lifting wavelet transform module was optimized using the canonic signed digit (CSD) coding method. A low-power EEG feature extraction circuit with a power consumption of 0.42 mW was constructed. This article employs the support vector machine (SVM) technique after feature extraction to categorize and identify epilepsy. A parallel SVM processing unit was constructed to accelerate classification and identification, and then a high-speed, low-power EEG epilepsy detection processor was implemented. The processor design was completed using TSMC 65 nm technology. The chip size is 0.98 mm2, operating voltage is 1 V, operating frequency is 1 MHz, epilepsy detection latency is 0.91 s, power consumption is 0.448 mW, and energy efficiency of a single classification is 2.23 μJ/class. The CHB-MIT database test results show that this processor has a sensitivity of 91.86% and a false detection rate of 0.17/h. Compared to other processors, this processor is more suitable for portable/wearable devices.
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Affiliation(s)
- Yongzhong Wen
- Faculty of Electrical Engineering and Computer Science, Ningbo University, Ningbo, 315211, China.
| | - Yuejun Zhang
- Faculty of Electrical Engineering and Computer Science, Ningbo University, Ningbo, 315211, China.
| | - Liang Wen
- Department of Electronic Technology, China Coast Guard Academy, Ningbo, Zhejiang, 315801, China.
| | - Haojie Cao
- Faculty of Electrical Engineering and Computer Science, Ningbo University, Ningbo, 315211, China.
| | - Guangpeng Ai
- Faculty of Electrical Engineering and Computer Science, Ningbo University, Ningbo, 315211, China.
| | - Minghong Gu
- Faculty of Electrical Engineering and Computer Science, Ningbo University, Ningbo, 315211, China.
| | - Pengjun Wang
- Electrical and Electronic Engineering, Wenzhou University, Wenzhou, 325035, China.
| | - Huiling Chen
- Department of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, 325035, China.
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15
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Persian emotion elicitation film set and signal database. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103290] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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16
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Extracting Epileptic Features in EEGs Using a Dual-Tree Complex Wavelet Transform Coupled with a Classification Algorithm. Brain Res 2022; 1779:147777. [PMID: 34999060 DOI: 10.1016/j.brainres.2022.147777] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Revised: 12/07/2021] [Accepted: 01/02/2022] [Indexed: 11/24/2022]
Abstract
The detection of epileptic seizures from electroencephalogram (EEG) signals is traditionally performed by clinical experts through visual inspection. It is a long process, is error prone, and requires a highly trained expert. In this research, a new method is presented for seizure classification for EEG signals using a dual-tree complex wavelet transform (DT-CWT) and fast Fourier transform (FFT) coupled with a least square support vector machine (LS-SVM) classifier. In this method, each EEG signal is divided into four segments. Each segment is further split into smaller sub-segments. The DT-CWT is applied to decompose each sub-segment into detailed and approximation coefficients (real and imaginary parts). The obtained coefficients by the DT-CWT at each decomposition level are passed through an FFT to identify the relevant frequency bands. Finally, a set of effective features are extracted from the sub-segments, and are then forwarded to the LS-SVM classifier to classify epileptic EEGs. In this paper, two epileptic EEG databases from Bonn and Bern Universities are used to evaluate the extracted features using the proposed method. The experimental results demonstrate that the method obtained an average accuracy of 97.7% and 96.8% for the Bonn and Bern databases, respectively. The results prove that the proposed DT-CWT and FFT based features extraction is an effective way to extract discriminative information from brain signals. The obtained results are also compared to those by k-means and Naïve Bayes classifiers as well as with the results from the previous methods reported for classifying epileptic seizures and identifying the focal and non-focal EEG signals. The obtained results show that the proposed method outperforms the others and it is effective in detecting epileptic seziures in EEG signals. The technique can be adopted to aid neurologists to better diagnose neurological disorders and for an early seizure warning system.
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17
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Exploiting Feature Selection and Neural Network Techniques for Identification of Focal and Nonfocal EEG Signals in TQWT Domain. JOURNAL OF HEALTHCARE ENGINEERING 2021; 2021:6283900. [PMID: 34659691 PMCID: PMC8418932 DOI: 10.1155/2021/6283900] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Revised: 07/22/2021] [Accepted: 08/04/2021] [Indexed: 11/17/2022]
Abstract
For drug resistance patients, removal of a portion of the brain as a cause of epileptic seizures is a surgical remedy. However, before surgery, the detailed analysis of the epilepsy localization area is an essential and logical step. The Electroencephalogram (EEG) signals from these areas are distinct and are referred to as focal, while the EEG signals from other normal areas are known as nonfocal. The visual inspection of multiple channels for detecting the focal EEG signal is time-consuming and prone to human error. To address this challenge, we propose a novel method based on differential operator and Tunable Q-factor wavelet transform (TQWT) to distinguish the focal and nonfocal signals. For this purpose, first, the EEG signal was differenced and then decomposed by TQWT. Second, several entropy-based features were derived from the TQWT subbands. Third, the efficacy of the six binary feature selection algorithms, binary bat algorithm (BBA), binary differential evolution (BDE) algorithm, firefly algorithm (FA), genetic algorithm (GA), grey wolf optimization (GWO), and particle swarm optimization (PSO), was evaluated. In the end, the selected features were fed to several machine learning and neural network classifiers. We observed that the PSO with neural networks provides an effective solution for the application of focal EEG signal detection. The proposed framework resulted in an average classification accuracy of 97.68%, a sensitivity of 97.26%, and a specificity of 98.11% in a tenfold cross-validation strategy, which is higher than the state of the art used in the public Bern-Barcelona EEG database.
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18
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Janisch J, Mitoyen C, Perinot E, Spezie G, Fusani L, Quigley C. Video Recording and Analysis of Avian Movements and Behavior: Insights from Courtship Case Studies. Integr Comp Biol 2021; 61:1378-1393. [PMID: 34037219 PMCID: PMC8516111 DOI: 10.1093/icb/icab095] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Video recordings are useful tools for advancing our understanding of animal movements and behavior. Over the past decades, a burgeoning area of behavioral research has put forward innovative methods to investigate animal movement using video analysis, which includes motion capture and machine learning algorithms. These tools are particularly valuable for the study of elaborate and complex motor behaviors, but can be challenging to use. We focus in particular on elaborate courtship displays, which commonly involve rapid and/or subtle motor patterns. Here, we review currently available tools and provide hands-on guidelines for implementing these techniques in the study of avian model species. First, we suggest a set of possible strategies and solutions for video acquisition based on different model systems, environmental conditions, and time or financial budget. We then outline the available options for video analysis and illustrate how different analytical tools can be chosen to draw inference about animal motor performance. Finally, a detailed case study describes how these guidelines have been implemented to study courtship behavior in golden-collared manakins (Manacus vitellinus).
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Affiliation(s)
- Judith Janisch
- Konrad Lorenz Institute of Ethology, University of Veterinary Medicine, 1160 Vienna, Austria
| | - Clementine Mitoyen
- Department of Cognitive Biology, University of Vienna, 1090 Vienna, Austria
| | - Elisa Perinot
- Konrad Lorenz Institute of Ethology, University of Veterinary Medicine, 1160 Vienna, Austria
| | - Giovanni Spezie
- Konrad Lorenz Institute of Ethology, University of Veterinary Medicine, 1160 Vienna, Austria
| | - Leonida Fusani
- Konrad Lorenz Institute of Ethology, University of Veterinary Medicine, 1160 Vienna, Austria
- Department of Cognitive Biology, University of Vienna, 1090 Vienna, Austria
| | - Cliodhna Quigley
- Konrad Lorenz Institute of Ethology, University of Veterinary Medicine, 1160 Vienna, Austria
- Department of Cognitive Biology, University of Vienna, 1090 Vienna, Austria
- Vienna Cognitive Science Hub, University of Vienna, 1090 Vienna, Austria
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19
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Liu G, Xiao R, Xu L, Cai J. Minireview of Epilepsy Detection Techniques Based on Electroencephalogram Signals. Front Syst Neurosci 2021; 15:685387. [PMID: 34093143 PMCID: PMC8173051 DOI: 10.3389/fnsys.2021.685387] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Accepted: 04/20/2021] [Indexed: 12/11/2022] Open
Abstract
Epilepsy is one of the most common neurological disorders typically characterized by recurrent and uncontrollable seizures, which seriously affects the quality of life of epilepsy patients. The effective tool utilized in the clinical diagnosis of epilepsy is the Electroencephalogram (EEG). The emergence of machine learning promotes the development of automated epilepsy detection techniques. New algorithms are continuously introduced to shorten the detection time and improve classification accuracy. This minireview summarized the latest research of epilepsy detection techniques that focused on acquiring, preprocessing, feature extraction, and classification of epileptic EEG signals. The application of seizure prediction and localization based on EEG signals in the diagnosis of epilepsy was also introduced. And then, the future development trend of epilepsy detection technology has prospected at the end of the article.
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Affiliation(s)
- Guangda Liu
- College of Instrumentation and Electrical Engineering, Jilin University, Changchun, China
| | - Ruolan Xiao
- College of Instrumentation and Electrical Engineering, Jilin University, Changchun, China
| | - Lanyu Xu
- College of Instrumentation and Electrical Engineering, Jilin University, Changchun, China
| | - Jing Cai
- College of Instrumentation and Electrical Engineering, Jilin University, Changchun, China
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20
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Computer-Aided Intracranial EEG Signal Identification Method Based on a Multi-Branch Deep Learning Fusion Model and Clinical Validation. Brain Sci 2021; 11:brainsci11050615. [PMID: 34064889 PMCID: PMC8150766 DOI: 10.3390/brainsci11050615] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Revised: 05/04/2021] [Accepted: 05/07/2021] [Indexed: 12/19/2022] Open
Abstract
Surgical intervention or the control of drug-refractory epilepsy requires accurate analysis of invasive inspection intracranial EEG (iEEG) data. A multi-branch deep learning fusion model is proposed to identify epileptogenic signals from the epileptogenic area of the brain. The classical approach extracts multi-domain signal wave features to construct a time-series feature sequence and then abstracts it through the bi-directional long short-term memory attention machine (Bi-LSTM-AM) classifier. The deep learning approach uses raw time-series signals to build a one-dimensional convolutional neural network (1D-CNN) to achieve end-to-end deep feature extraction and signal detection. These two branches are integrated to obtain deep fusion features and results. Resampling is employed to split the imbalanced epileptogenic and non-epileptogenic samples into balanced subsets for clinical validation. The model is validated over two publicly available benchmark iEEG databases to verify its effectiveness on a private, large-scale, clinical stereo EEG database. The model achieves high sensitivity (97.78%), accuracy (97.60%), and specificity (97.42%) on the Bern–Barcelona database, surpassing the performance of existing state-of-the-art techniques. It is then demonstrated on a clinical dataset with an average intra-subject accuracy of 92.53% and cross-subject accuracy of 88.03%. The results suggest that the proposed method is a valuable and extremely robust approach to help researchers and clinicians develop an automated method to identify the source of iEEG signals.
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21
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Shams M, Sagheer A. A natural evolution optimization based deep learning algorithm for neurological disorder classification. Biomed Mater Eng 2021; 31:73-94. [PMID: 32474459 DOI: 10.3233/bme-201081] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
BACKGROUND A neurological disorder is one of the significant problems of the nervous system that affects the essential functions of the human brain and spinal cord. Monitoring brain activity through electroencephalography (EEG) has become an important tool in the diagnosis of brain disorders. The robust automatic classification of EEG signals is an important step towards detecting a brain disorder in its earlier stages before status deterioration. OBJECTIVE Motivated by the computation capabilities of natural evolution strategies (NES), this paper introduces an effective automatic classification approach denoted as natural evolution optimization-based deep learning (NEODL). The proposed classifier is an ingredient in a signal processing chain that comprises other state-of-the-art techniques in a consistent framework for the purpose of automatic EEG classification. METHODS The proposed framework consists of four steps. First, the L1-principal component analysis technique is used to enhance the raw EEG signal against any expected artifacts or noise. Second, the purified EEG signal is decomposed into a number of sub-bands by applying the wavelet transform technique where a number of spectral and statistical features are extracted. Third, the extracted features are examined using the artificial bee colony approach in order to optimally select the best features. Lastly, the selected features are treated using the proposed NEODL classifier, where the input signal is classified according to the problem at hand. RESULTS The proposed approach is evaluated using two benchmark datasets and addresses two neurological disorder applications: epilepsy disease and motor imagery. Several experiments are conducted where the proposed classifier outperforms other deep learning techniques as well as other existing approaches. CONCLUSION The proposed framework, including the proposed classifier (NEODL), has a promising performance in the classification of EEG signals, including epilepsy disease and motor imagery. Based on the given results, it is expected that this approach will also be useful for the identification of the epileptogenic areas in the human brain. Accordingly, it may find application in the neuro-intensive care units, epilepsy monitoring units, and practical brain-computer interface systems in clinics.
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Affiliation(s)
- Maha Shams
- Center for Artificial Intelligence and Robotics (Cairo), Department of Computer Sciences, Aswan University, Egypt
| | - Alaa Sagheer
- Center for Artificial Intelligence and Robotics (Cairo), Department of Computer Sciences, Aswan University, Egypt.,Department of Computer Sciences, College of Computer Sciences and IT, King Faisal University, Saudi Arabia
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22
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Sui L, Zhao X, Zhao Q, Tanaka T, Cao J. Hybrid Convolutional Neural Network for Localization of Epileptic Focus Based on iEEG. Neural Plast 2021; 2021:6644365. [PMID: 34007267 PMCID: PMC8100408 DOI: 10.1155/2021/6644365] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2020] [Revised: 03/14/2021] [Accepted: 04/06/2021] [Indexed: 11/17/2022] Open
Abstract
Epileptic focus localization by analysing intracranial electroencephalogram (iEEG) plays a critical role in successful surgical therapy of resection of the epileptogenic lesion. However, manual analysis and classification of the iEEG signal by clinicians are arduous and time-consuming and excessively depend on the experience. Due to individual differences of patients, the iEEG signal from different patients usually shows very diverse features even if the features belong to the same class. Accordingly, automatic detection of epileptic focus is required to improve the accuracy and to shorten the time for treatment. In this paper, we propose a novel feature fusion-based iEEG classification method, a deep learning model termed Time-Frequency Hybrid Network (TF-HybridNet), in which short-time Fourier transform (STFT) and 1d convolution layers are performed on the input iEEG in parallel to extract features of the time-frequency domain and feature maps. And then, the time-frequency features and feature maps are fused and fed to a 2d convolutional neural network (CNN). We used the Bern-Barcelona iEEG dataset for evaluating the performance of TF-HybridNet, and the experimental results show that our approach is able to differentiate the focal from nonfocal iEEG signal with an average classification accuracy of 94.3% and demonstrates an improved accuracy rate compared to the model using only STFT or one-dimensional convolutional layers as feature extraction.
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Affiliation(s)
- Linfeng Sui
- Graduate School of Engineering, Saitama Institute of Technology, 369-0293, Japan
- RIKEN Center for Advanced Intelligence Project (AIP), 103-0027, Japan
| | - Xuyang Zhao
- RIKEN Center for Advanced Intelligence Project (AIP), 103-0027, Japan
- Department of Electrical and Electronic Engineering, Tokyo University of Agriculture and Technology, 184-8588, Japan
| | - Qibin Zhao
- RIKEN Center for Advanced Intelligence Project (AIP), 103-0027, Japan
| | - Toshihisa Tanaka
- RIKEN Center for Advanced Intelligence Project (AIP), 103-0027, Japan
- Department of Electrical and Electronic Engineering, Tokyo University of Agriculture and Technology, 184-8588, Japan
| | - Jianting Cao
- Graduate School of Engineering, Saitama Institute of Technology, 369-0293, Japan
- RIKEN Center for Advanced Intelligence Project (AIP), 103-0027, Japan
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23
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Rashed-Al-Mahfuz M, Moni MA, Uddin S, Alyami SA, Summers MA, Eapen V. A Deep Convolutional Neural Network Method to Detect Seizures and Characteristic Frequencies Using Epileptic Electroencephalogram (EEG) Data. IEEE JOURNAL OF TRANSLATIONAL ENGINEERING IN HEALTH AND MEDICINE-JTEHM 2021; 9:2000112. [PMID: 33542859 PMCID: PMC7851059 DOI: 10.1109/jtehm.2021.3050925] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Revised: 12/24/2020] [Accepted: 01/03/2021] [Indexed: 11/09/2022]
Abstract
BACKGROUND Diagnosing epileptic seizures using electroencephalogram (EEG) in combination with deep learning computational methods has received much attention in recent years. However, to date, deep learning techniques in seizure detection have not been effectively harnessed due to sub-optimal classifier design and improper representation of the time-domain signal. METHODS In this study, we focused on designing and evaluating deep convolutional neural network-based classifiers for seizure detection. Signal-to-image conversion methods are proposed to convert time-domain EEG signal to a time-frequency represented image to prepare the input data for classification. We proposed and evaluated three classification methods comprising of five classifiers to determine which is more accurate for seizure detection. Accuracy data were then compared to previous studies of the same dataset. RESULTS We found our proposed model and signal-to-image conversion method outperformed all previous studies in the most cases. The proposed FT-VGG16 classifier achieved the highest average classification accuracy of 99.21%. In addition, the Shapley Additive exPlanations (SHAP) analysis approach was employed to uncover the feature frequencies in the EEG that contribute most to improved classification accuracy. To the best of our knowledge, this is the first study to compute the contribution of frequency components to target seizure classification; thus allowing the identification of distinct seizure-related EEG frequency components compared to normal EEG measures. CONCLUSION Thus our developed deep convolutional neural network models are useful to detect seizures and characteristic frequencies using EEG data collected from the patients and this model could be clinically applicable for the automated seizures detection.
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Affiliation(s)
- Md Rashed-Al-Mahfuz
- Department of Computer Science and EngineeringUniversity of RajshahiRajshahi6205Bangladesh
| | - Mohammad Ali Moni
- Faculty of Medicine, School of PsychiatryUniversity of New South WalesSydneyNSW2052Australia
| | - Shahadat Uddin
- Complex Systems Research Group, Faculty of EngineeringThe University of SydneyDarlingtonNSW2008Australia
| | - Salem A Alyami
- Department of Mathematics and StatisticsImam Mohammad Ibn Saud Islamic UniversityRiyadh11432Saudi Arabia
| | | | - Valsamma Eapen
- Faculty of Medicine, School of PsychiatryUniversity of New South WalesSydneyNSW2052Australia
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24
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Gupta M, Gupta A, Yadav V, Parvaze SP, Singh A, Saini J, Patir R, Vaishya S, Ahlawat S, Gupta RK. Comparative evaluation of intracranial oligodendroglioma and astrocytoma of similar grades using conventional and T1-weighted DCE-MRI. Neuroradiology 2021; 63:1227-1239. [PMID: 33469693 DOI: 10.1007/s00234-021-02636-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Accepted: 01/05/2021] [Indexed: 11/25/2022]
Abstract
PURPOSE This retrospective study was performed on a 3T MRI to determine the unique conventional MR imaging and T1-weighted DCE-MRI features of oligodendroglioma and astrocytoma and investigate the utility of machine learning algorithms in their differentiation. METHODS Histologically confirmed, 81 treatment-naïve patients were classified into two groups as per WHO 2016 classification: oligodendroglioma (n = 16; grade II, n = 25; grade III) and astrocytoma (n = 10; grade II, n = 30; grade III). The differences in tumor morphology characteristics were evaluated using Z-test. T1-weighted DCE-MRI data were analyzed using an in-house built MATLAB program. The mean 90th percentile of relative cerebral blood flow, relative cerebral blood volume corrected, volume transfer rate from plasma to extracellular extravascular space, and extravascular extracellular space volume values were evaluated using independent Student's t test. Support vector machine (SVM) classifier was constructed to differentiate two groups across grade II, grade III, and grade II+III based on statistically significant features. RESULTS Z-test signified only calcification among conventional MR features to categorize oligodendroglioma and astrocytoma across grade III and grade II+III tumors. No statistical significance was found in the perfusion parameters between two groups and its subtypes. SVM trained on calcification also provided moderate accuracy to differentiate oligodendroglioma from astrocytoma. CONCLUSION We conclude that conventional MR features except calcification and the quantitative T1-weighted DCE-MRI parameters fail to discriminate between oligodendroglioma and astrocytoma. The SVM could not further aid in their differentiation. The study also suggests that the presence of more than 50% T2-FLAIR mismatch may be considered as a more conclusive sign for differentiation of IDH mutant astrocytoma.
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Affiliation(s)
- Mamta Gupta
- Department of Radiology, Fortis Memorial Research Institute, Sector 44, Gurgaon, Haryana, 122002, India
| | - Abhinav Gupta
- Department of Radiology, Fortis Memorial Research Institute, Sector 44, Gurgaon, Haryana, 122002, India
| | - Virendra Yadav
- Centre for Biomedical Engineering, IIT Delhi, New Delhi, India
| | | | - Anup Singh
- Centre for Biomedical Engineering, IIT Delhi, New Delhi, India
| | - Jitender Saini
- National Institute of Mental Health and Neurosciences, Bangalore, Karnataka, India
| | - Rana Patir
- Department of Neurosurgery, Fortis Memorial Research Institute, Sector 44, Gurgaon, Haryana, India
| | - Sandeep Vaishya
- Department of Neurosurgery, Fortis Memorial Research Institute, Sector 44, Gurgaon, Haryana, India
| | - Sunita Ahlawat
- SRL Diagnostics, Fortis Memorial Research Institute, Sector 44, Gurgaon, Haryana, India
| | - Rakesh Kumar Gupta
- Department of Radiology, Fortis Memorial Research Institute, Sector 44, Gurgaon, Haryana, 122002, India.
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25
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Detection of focal and non-focal EEG signals using non-linear features derived from empirical wavelet transform rhythms. Phys Eng Sci Med 2021; 44:157-171. [PMID: 33417158 DOI: 10.1007/s13246-020-00963-3] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Accepted: 12/15/2020] [Indexed: 01/18/2023]
Abstract
Surgery is recommended for epilepsy diagnosis in cases where patients do not respond well to anti-epilepsy medications. Successful surgery is essentially dependent on the area suffered from epilepsy, i.e., focal area. Electroencephalogram (EEG) signals are considered a powerful tool to identify focal or non-focal (normal) areas. In this work, we propose an automated method for focal and non-focal EEG signal identification, taking into account non-linear features derived from rhythms in the empirical wavelet transform (EWT) domain. The research paradigm is related to the decomposition of EEG signals into the delta, theta, alpha, beta, and gamma rhythms through the development of the EWT. Specifically, various non-linear features are extracted from rhythms composed of Stein's unbiased risk estimation entropy, threshold entropy, centered correntropy, and information potential. From a statistical point of view, Kruskal-Wallis (KW) statistical test is then used to identify the significant features. The significant features obtained from the KW test are fed to support vector machine (SVM) and k-nearest neighbor (KNN) classifiers. The SURE entropy provides an average classification accuracy of 93% and 82.6% for small and entire datasets by utilizing SVM and KNN classifiers with a tenfold cross-validation method, respectively. It is observed that the proposed method is better and competitive in comparison with other studies for small and large data, respectively. The obtained outcome concludes that the proposed framework could be used for people with epilepsy and can help the physicians to validate the assessment.
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26
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Akter MS, Islam MR, Tanaka T, Iimura Y, Mitsuhashi T, Sugano H, Wang D, Molla MKI. Statistical Features in High-Frequency Bands of Interictal iEEG Work Efficiently in Identifying the Seizure Onset Zone in Patients with Focal Epilepsy. ENTROPY 2020; 22:e22121415. [PMID: 33334058 PMCID: PMC7765521 DOI: 10.3390/e22121415] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Revised: 12/11/2020] [Accepted: 12/11/2020] [Indexed: 01/22/2023]
Abstract
The design of a computer-aided system for identifying the seizure onset zone (SOZ) from interictal and ictal electroencephalograms (EEGs) is desired by epileptologists. This study aims to introduce the statistical features of high-frequency components (HFCs) in interictal intracranial electroencephalograms (iEEGs) to identify the possible seizure onset zone (SOZ) channels. It is known that the activity of HFCs in interictal iEEGs, including ripple and fast ripple bands, is associated with epileptic seizures. This paper proposes to decompose multi-channel interictal iEEG signals into a number of subbands. For every 20 s segment, twelve features are computed from each subband. A mutual information (MI)-based method with grid search was applied to select the most prominent bands and features. A gradient-boosting decision tree-based algorithm called LightGBM was used to score each segment of the channels and these were averaged together to achieve a final score for each channel. The possible SOZ channels were localized based on the higher value channels. The experimental results with eleven epilepsy patients were tested to observe the efficiency of the proposed design compared to the state-of-the-art methods.
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Affiliation(s)
- Most. Sheuli Akter
- Department of Electronic and Information Engineering, Tokyo University of Agriculture and Technology, Tokyo 184-8588, Japan;
| | - Md. Rabiul Islam
- Institute of Global Innovation Research, Tokyo University of Agriculture and Technology, Tokyo 184-8588, Japan;
| | - Toshihisa Tanaka
- Department of Electronic and Information Engineering, Tokyo University of Agriculture and Technology, Tokyo 184-8588, Japan;
- Institute of Global Innovation Research, Tokyo University of Agriculture and Technology, Tokyo 184-8588, Japan;
- Department of Electrical and Electronic Engineering, Tokyo University of Agriculture and Technology, Tokyo 184-8588, Japan;
- Department of Neurosurgery, Epilepsy Center, Juntendo University, Tokyo 113-8421, Japan; (Y.I.); (T.M.); (H.S.)
- RIKEN Center for Advanced Intelligence Project, Tokyo 103-0027, Japan
- RIKEN Center for Brain Science, Saitama 351-0106, Japan
- School of Computer Science and Technology, Hangzhou Dianzi University, Hangzhou 310018, China
- Correspondence: ; Tel.: +81-42-388-7123
| | - Yasushi Iimura
- Department of Neurosurgery, Epilepsy Center, Juntendo University, Tokyo 113-8421, Japan; (Y.I.); (T.M.); (H.S.)
| | - Takumi Mitsuhashi
- Department of Neurosurgery, Epilepsy Center, Juntendo University, Tokyo 113-8421, Japan; (Y.I.); (T.M.); (H.S.)
| | - Hidenori Sugano
- Department of Neurosurgery, Epilepsy Center, Juntendo University, Tokyo 113-8421, Japan; (Y.I.); (T.M.); (H.S.)
| | - Duo Wang
- Department of Electrical and Electronic Engineering, Tokyo University of Agriculture and Technology, Tokyo 184-8588, Japan;
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27
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Aydemir T, Sahin M, Aydemir O. Determination of hypertension disease using chirp z-transform and statistical features of optimal band-pass filtered short-time photoplethysmography signals. Biomed Phys Eng Express 2020; 6. [PMID: 34035194 DOI: 10.1088/2057-1976/abc634] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Accepted: 10/30/2020] [Indexed: 11/11/2022]
Abstract
Hypertension is the condition where the normal blood pressure is high. This situation is manifested by the high pressure of the blood in the vein towards the vessel wall. Hypertension mostly affects the brain, kidneys, eyes, arteries and heart. Therefore, the diagnosis of this common disease is important. It may take days, weeks or even months for diagnosis. Often a device, called a blood pressure holter, is connected to the person for 24 or 48 h and the person's blood pressure is recorded at certain intervals. Diagnosis can be made by the specialist physician considering these results. In recent years, various physiological measurement techniques have been used to accelerate this time-consuming diagnostic phase and intelligent models have been proposed. One of these techniques is photopletesmography (PPG). In this study, a model for the detection of hypertension disease in individuals was proposed using chirp z-transform and statistical features (total band power, autoregressive model parameters, standard deviation of signal's derivative and zero crossing rate) of optimal band-pass filtered short-time PPG signals. The proposed method was successfully applied to 657 PPG trials, which each of them had only 2.1 s signal length and achieved a classification accuracy rate of 77.52% on the test data. The results showed that the diagnosis of hypertension can be performed effectively by chirp z-transform and statistical features and support vector machine classifier using optimal frequency range of 1.4-6 Hz.
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Affiliation(s)
- Tugba Aydemir
- Department of Physics, Recep Tayyip Erdogan University, Rize, Turkey
| | - Mehmet Sahin
- Department of Physics, Recep Tayyip Erdogan University, Rize, Turkey
| | - Onder Aydemir
- Department of Electrical and Electronics Engineering, Karadeniz Technical University, Trabzon, Turkey
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Narin A. Detection of Focal and Non-focal Epileptic Seizure Using Continuous Wavelet Transform-Based Scalogram Images and Pre-trained Deep Neural Networks. Ing Rech Biomed 2020. [DOI: 10.1016/j.irbm.2020.11.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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J. P, Subathra MSP, Mohammed MA, Maashi MS, Garcia-Zapirain B, Sairamya NJ, George ST. Detection of Focal and Non-Focal Electroencephalogram Signals Using Fast Walsh-Hadamard Transform and Artificial Neural Network. SENSORS (BASEL, SWITZERLAND) 2020; 20:4952. [PMID: 32883006 PMCID: PMC7506968 DOI: 10.3390/s20174952] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Revised: 08/17/2020] [Accepted: 08/20/2020] [Indexed: 11/16/2022]
Abstract
The discrimination of non-focal class (NFC) and focal class (FC), is vital in localizing the epileptogenic zone (EZ) during neurosurgery. In the conventional diagnosis method, the neurologist has to visually examine the long hour electroencephalogram (EEG) signals, which consumes time and is prone to error. Hence, in this present work, automated diagnosis of FC EEG signals from NFC EEG signals is developed using the Fast Walsh-Hadamard Transform (FWHT) method, entropies, and artificial neural network (ANN). The FWHT analyzes the EEG signals in the frequency domain and decomposes it into the Hadamard coefficients. Five different nonlinear features, namely approximate entropy (ApEn), log-energy entropy (LogEn), fuzzy entropy (FuzzyEn), sample entropy (SampEn), and permutation entropy (PermEn) are extracted from the decomposed Hadamard coefficients. The extracted features detail the nonlinearity in the NFC and the FC EEG signals. The judicious entropy features are supplied to the ANN classifier, with a 10-fold cross-validation method to classify the NFC and FC classes. Two publicly available datasets such as the University of Bonn and Bern-Barcelona dataset are used to evaluate the proposed approach. A maximum sensitivity of 99.70%, the accuracy of 99.50%, and specificity of 99.30% with the 3750 pairs of NFC and FC signal are achieved using the Bern-Barcelona dataset, while the accuracy of 92.80%, the sensitivity of 91%, and specificity of 94.60% is achieved using University of Bonn dataset. Compared to the existing technique, the proposed approach attained a maximum classification performance in both the dataset.
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Affiliation(s)
- Prasanna J.
- Department of Electronics and Communication Engineering, Karunya Institute of Technology and Sciences, Tamil Nadu 641114, India; (P.J.); (N.J.S.)
| | - M. S. P. Subathra
- Department of Electrical and Electronics Engineering, Karunya Institute of Technology and Sciences, Tamil Nadu 641114, India;
| | - Mazin Abed Mohammed
- College of Computer Science and Information Technology, University of Anbar, 11, Ramadi, Anbar, Iraq;
| | - Mashael S. Maashi
- Software Engineering Department, College of Computer and Information Sciences, King Saud University, Riyadh 11451, Saudi Arabia;
| | | | - N. J. Sairamya
- Department of Electronics and Communication Engineering, Karunya Institute of Technology and Sciences, Tamil Nadu 641114, India; (P.J.); (N.J.S.)
| | - S. Thomas George
- Department of Biomedical Engineering, Karunya Institute of Technology and Sciences, Tamil Nadu 641114, India
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Adaptive median feature baseline correction for improving recognition of epileptic seizures in ICU EEG. Neurocomputing 2020. [DOI: 10.1016/j.neucom.2020.04.144] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
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Sriraam N, Temel Y, Rao SV, Kubben PL. A convolutional neural network based framework for classification of seizure types. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2019:2547-2550. [PMID: 31946416 DOI: 10.1109/embc.2019.8857359] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Epileptic seizures are caused by a disturbance in the electrical activity of the brain and classified as many different types of epileptic seizures based on the characteristics of EEG and other parameters. Till now research has been conducted to classify EEG as seizure and non-seizures, but the classification of seizure types has not been explored. Thus, in this paper, we have proposed the 8-class classification problem in order to classify different seizure types using convolutional neural networks (CNN). This research study suggests a CNN based framework for classification of epileptic seizure types that include simple partial, complex partial, focal non-specific, generalized non-specific, absence, tonic, and tonic-clonic, and non-seizures. EEG time series was converted into spectrogram stacks and used as input for CNN. To the best of authors knowledge, ours is the very first study that classified the seizures types using the computational algorithm. The four CNN models, namely AlexNet, VGG16, VGG19, and basic CNN model was applied to study the performance of 8-class classification problem. The proposed study showed a classification accuracy of 84.06%, 79.71%, 76.81%, and 82.14% using AlexNet, VGG16, VGG19 and basic CNN models respectively. The experimental results suggest that the proposed framework could be helpful to the neurology community for recognition of seizures types.
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Raghu S, Sriraam N, Gommer ED, Hilkman DMW, Temel Y, Rao SV, Hegde AS, Kubben PL. Cross-database evaluation of EEG based epileptic seizures detection driven by adaptive median feature baseline correction. Clin Neurophysiol 2020; 131:1567-1578. [PMID: 32417698 DOI: 10.1016/j.clinph.2020.03.033] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Revised: 03/04/2020] [Accepted: 03/12/2020] [Indexed: 01/15/2023]
Abstract
OBJECTIVE In long-term electroencephalogram (EEG) signals, automated classification of epileptic seizures is desirable in diagnosing epilepsy patients, as it otherwise depends on visual inspection. To the best of the author's knowledge, existing studies have validated their algorithms using cross-validation on the same database and less number of attempts have been made to extend their work on other databases to test the generalization capability of the developed algorithms. In this study, we present the algorithm for cross-database evaluation for classification of epileptic seizures using five EEG databases collected from different centers. The cross-database framework helps when sufficient epileptic seizures EEG data are not available to build automated seizure detection model. METHODS Two features, namely successive decomposition index and matrix determinant were extracted at a segmentation length of 4 s (50% overlap). Then, adaptive median feature baseline correction (AM-FBC) was applied to overcome the inter-patient and inter-database variation in the feature distribution. The classification was performed using a support vector machine classifier with leave-one-database-out cross-validation. Different classification scenarios were considered using AM-FBC, smoothing of the train and test data, and post-processing of the classifier output. RESULTS Simulation results revealed the highest area under the curve-sensitivity-specificity-false detections (per hour) of 1-1-1-0.15, 0.89-0.99-0.82-2.5, 0.99-0.73-1-1, 0.95-0.97-0.85-1.7, 0.99-0.99-0.92-1.1 using the Ramaiah Medical College and Hospitals, Children's Hospital Boston-Massachusetts Institute of Technology, Temple University Hospital, Maastricht University Medical Centre, and University of Bonn databases respectively. CONCLUSIONS We observe that the AM-FBC plays a significant role in improving seizure detection results by overcoming inter-database variation of feature distribution. SIGNIFICANCE To the best of the author's knowledge, this is the first study reporting on the cross-database evaluation of classification of epileptic seizures and proven to be better generalization capability when evaluated using five databases and can contribute to accurate and robust detection of epileptic seizures in real-time.
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Affiliation(s)
- S Raghu
- Department of Neurosurgery, School for Mental Health and Neuroscience of the Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, the Netherlands; Center for Medical Electronics and Computing, MS Ramaiah Institute of Technology, Bengaluru, India.
| | - Natarajan Sriraam
- Center for Medical Electronics and Computing, MS Ramaiah Institute of Technology, Bengaluru, India.
| | - Erik D Gommer
- Department of Clinical Neurophysiology, Maastricht University Medical Center, Maastricht, the Netherlands
| | - Danny M W Hilkman
- Department of Clinical Neurophysiology, Maastricht University Medical Center, Maastricht, the Netherlands
| | - Yasin Temel
- Department of Neurosurgery, Maastricht University Medical Center, Maastricht, the Netherlands
| | | | | | - Pieter L Kubben
- Department of Neurosurgery, Maastricht University Medical Center, Maastricht, the Netherlands
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Sharma R, Sircar P, Pachori RB. Automated focal EEG signal detection based on third order cumulant function. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2020.101856] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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35
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EEG based multi-class seizure type classification using convolutional neural network and transfer learning. Neural Netw 2020; 124:202-212. [DOI: 10.1016/j.neunet.2020.01.017] [Citation(s) in RCA: 144] [Impact Index Per Article: 28.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Revised: 01/15/2020] [Accepted: 01/16/2020] [Indexed: 01/22/2023]
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36
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Automatic focal and non-focal EEG detection using entropy-based features from flexible analytic wavelet transform. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2019.101761] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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37
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Real-Time Localization of Epileptogenic Foci EEG Signals: An FPGA-Based Implementation. APPLIED SCIENCES-BASEL 2020. [DOI: 10.3390/app10030827] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The epileptogenic focus is a brain area that may be surgically removed to control of epileptic seizures. Locating it is an essential and crucial step prior to the surgical treatment. However, given the difficulty of determining the localization of this brain region responsible of the initial seizure discharge, many works have proposed machine learning methods for the automatic classification of focal and non-focal electroencephalographic (EEG) signals. These works use automatic classification as an analysis tool for helping neurosurgeons to identify focal areas off-line, out of surgery, during the processing of the huge amount of information collected during several days of patient monitoring. In turn, this paper proposes an automatic classification procedure capable of assisting neurosurgeons online, during the resective epilepsy surgery, to refine the localization of the epileptogenic area to be resected, if they have doubts. This goal requires a real-time implementation with as low a computational cost as possible. For that reason, this work proposes both a feature set and a classifier model that minimizes the computational load while preserving the classification accuracy at 95.5%, a level similar to previous works. In addition, the classification procedure has been implemented on a FPGA device to determine its resource needs and throughput. Thus, it can be concluded that such a device can embed the whole classification process, from accepting raw signals to the delivery of the classification results in a cost-effective Xilinx Spartan-6 FPGA device. This real-time implementation begins providing results after a 5 s latency, and later, can deliver floating-point classification results at 3.5 Hz rate, using overlapped time-windows.
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Automatic Detection of Epileptic Seizures in EEG Using Sparse CSP and Fisher Linear Discrimination Analysis Algorithm. J Med Syst 2020; 44:43. [PMID: 31897615 DOI: 10.1007/s10916-019-1504-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2019] [Accepted: 11/14/2019] [Indexed: 10/25/2022]
Abstract
In order to realize the automatic epileptic seizure detection, feature extraction and classification of electroencephalogram (EEG) signals are performed on the interictal, the pre-ictal, and the ictal status of epilepsy patients. There is no effective strategy for selecting the number of channels and spatial filters in feature extraction of multichannel EEG data. Therefore, this paper combined sparse idea and greedy search algorithm to improve the feature extraction of common space pattern. The feature extraction can effectively overcome the repeating selection problem of feature pattern in the eigenvector space by the traditional method. Then we used the Fisher linear discriminant analysis to realize the classification. The results show that the proposed method can get high classification accuracy using fewer data. For 10 subjects, the averaged accuracy of epilepsy detection is more than 99%. So, the detection of an epileptic seizure based on sparse features using Fisher linear discriminant analysis classifiers is more suitable for a reliable, automatic epileptic seizure detection system to enhance the patient's care and the quality of life.
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Raghu S, Sriraam N, Temel Y, Rao SV, Hegde AS, Kubben PL. Complexity analysis and dynamic characteristics of EEG using MODWT based entropies for identification of seizure onset. J Biomed Res 2020; 34:1-3. [PMID: 32561693 PMCID: PMC7324271 DOI: 10.7555/jbr.33.20190021] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
In this paper, complexity analysis and dynamic characteristics of electroencephalogram (EEG) signal based on maximal overlap discrete wavelet transform (MODWT) has been exploited for the identification of seizure onset. Since wavelet-based studies were well suited for classification of normal and epileptic seizure EEG, we have applied MODWT which is an improved version of discrete wavelet transform (DWT). The selection of optimal wavelet sub-band and features plays a crucial role to understand the brain dynamics in epileptic patients. Therefore, we have investigated MODWT using four different wavelets, namely Haar, Coif4, Dmey, and Sym4 sub-bands until seven levels. Further, we have explored the potentials of six entropies, namely sigmoid, Shannon, wavelet, Renyi, Tsallis, and Steins unbiased risk estimator (SURE) entropies in each sub-band. The sigmoid entropy extracted from Haar wavelet in sub-band D4 showed the highest accuracy of 98.44% using support vector machine classifier for the EEG collected from Ramaiah Medical College and Hospitals (RMCH). Further, the highest accuracy of 100% and 94.51% was achieved for the University of Bonn (UBonn) and CHB-MIT databases respectively. The findings of the study showed that Haar and Dmey wavelets were found to be computationally economical and expensive respectively. Besides, in terms of dynamic characteristics, MODWT results revealed that the highest energy present in sub-bands D2, D3, and D4 and entropies in those respective sub-bands outperformed other entropies in terms of classification results for RMCH database. Similarly, using all the entropies, sub-bands D5 and D6 outperformed other sub-bands for UBonn and CHB-MIT databases respectively. In conclusion, the comparison results of MODWT outperformed DWT.
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Affiliation(s)
- Shivarudhrappa Raghu
- Department of Neurosurgery, School for Mental Health and Neuroscience of the Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht 6200 MD, The Netherlands;Center for Medical Electronics and Computing, M S Ramaiah Institute of Technology, Bengaluru 560054, India
| | - Natarajan Sriraam
- Center for Medical Electronics and Computing, M S Ramaiah Institute of Technology, Bengaluru 560054, India
| | - Yasin Temel
- Department of Neurosurgery, Maastricht University Medical Center
| | | | | | - Pieter L Kubben
- Department of Neurosurgery, Maastricht University Medical Center
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Fractal dimension undirected correlation graph-based support vector machine model for identification of focal and non-focal electroencephalography signals. Biomed Signal Process Control 2019. [DOI: 10.1016/j.bspc.2019.101611] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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41
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Automated detection of epileptic seizures using successive decomposition index and support vector machine classifier in long-term EEG. Neural Comput Appl 2019. [DOI: 10.1007/s00521-019-04389-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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42
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Performance evaluation of DWT based sigmoid entropy in time and frequency domains for automated detection of epileptic seizures using SVM classifier. Comput Biol Med 2019; 110:127-143. [DOI: 10.1016/j.compbiomed.2019.05.016] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2018] [Revised: 05/20/2019] [Accepted: 05/20/2019] [Indexed: 12/16/2022]
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Sriraam N, Raghu S, Tamanna K, Narayan L, Khanum M, Hegde AS, Kumar AB. Automated epileptic seizures detection using multi-features and multilayer perceptron neural network. Brain Inform 2018; 5:10. [PMID: 30175391 PMCID: PMC6170940 DOI: 10.1186/s40708-018-0088-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2018] [Accepted: 08/10/2018] [Indexed: 11/12/2022] Open
Abstract
Detection of epileptic seizure activities from long-term multi-channel electroencephalogram (EEG) signals plays a significant role in the timely treatment of the patients with epilepsy. Visual identification of epileptic seizure in long-term EEG is cumbersome and tedious for neurologists, which might also lead to human error. Therefore, an automated tool for accurate detection of seizures in a long-term multi-channel EEG is essential for the clinical diagnosis. This study proposes an algorithm using multi-features and multilayer perceptron neural network (MLPNN) classifier. After appropriate approval from the ethical committee, recordings of EEG data were collected from the Institute of Neurosciences, Ramaiah Memorial College and Hospital, Bengaluru. Initially, preprocessing was performed to remove the power-line noise and motion artifacts. Four features, namely power spectral density (Yule–Walker), entropy (Shannon and Renyi), and Teager energy, were extracted. The Wilcoxon rank-sum test and descriptive analysis ensure the suitability of the proposed features for pattern classification. Single and multi-features were fed to the MLPNN classifier to evaluate the performance of the study. The simulation results showed sensitivity, specificity, and false detection rate of 97.1%, 97.8%, and 1 h−1, respectively, using multi-features. Further, the results indicate the proposed study is suitable for real-time seizure recognition from multi-channel EEG recording. The graphical user interface was developed in MATLAB to provide an automated biomarker for normal and epileptic EEG signals.
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Affiliation(s)
- N Sriraam
- Centre for Medical Electronics and Computing, Ramaiah Institute of Technology (Affiliated to VTU Belgaum), Bengaluru, India.
| | - S Raghu
- Centre for Medical Electronics and Computing, Ramaiah Institute of Technology (Affiliated to VTU Belgaum), Bengaluru, India
| | - Kadeeja Tamanna
- Centre for Medical Electronics and Computing, Ramaiah Institute of Technology (Affiliated to VTU Belgaum), Bengaluru, India
| | - Leena Narayan
- Centre for Medical Electronics and Computing, Ramaiah Institute of Technology (Affiliated to VTU Belgaum), Bengaluru, India
| | - Mehraj Khanum
- Centre for Medical Electronics and Computing, Ramaiah Institute of Technology (Affiliated to VTU Belgaum), Bengaluru, India
| | - A S Hegde
- Institute of Neuroscience, Ramaiah Medical College and Hospitals, Bengaluru, India
| | - Anjani Bhushan Kumar
- Institute of Neuroscience, Ramaiah Medical College and Hospitals, Bengaluru, India
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Raghu S, Sriraam N, Kumar GP, Hegde AS. A Novel Approach for Real-Time Recognition of Epileptic Seizures Using Minimum Variance Modified Fuzzy Entropy. IEEE Trans Biomed Eng 2018; 65:2612-2621. [PMID: 29993510 DOI: 10.1109/tbme.2018.2810942] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
OBJECTIVE Validation of epileptic seizures annotations from long-term electroencephalogram (EEG) recordings is a tough and tedious task for the neurological community. It is a well-known fact that computerized qualitative methods thoroughly assess the complex brain dynamics toward seizure detection and proven as one of the acceptable clinical indicators. METHODS This research study suggests a novel approach for real-time recognition of epileptic seizure from EEG recordings by a technique referred as minimum variance modified fuzzy entropy (MVMFzEn). Multichannel EEG recordings of 4.36 h of epileptic seizures and 25.74 h of normal EEG were considered. Signal processing techniques such as filters and independent component analysis were appropriated to reduce noise and artifacts. Unlike, the predefined fuzzy membership function, the modified fuzzy entropy utilizes relative energy as a membership function followed by scaling operation to obtain the feature. RESULTS Results revealed that MVMFzEn drops abruptly during an epileptic activity and this fact was used to set a threshold. An automated threshold derived from MVMFzEn assesses the classification efficiency of the given data during validation. It was observed from the results that the proposed method yields a classification accuracy of 100% without the use of any classifier. CONCLUSION The graphical user interface was designed in MATLAB to automatically label the normal and epileptic segments in the long-term EEG recordings. SIGNIFICANCE The ground truth clinical validation using validation specificity and validation sensitivity confirms the suitability of the proposed technique for automated annotation of epileptic seizures in real time.
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