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Wang W, Li Q, Wang J. A self-driven ESN-DSS approach for effective COVID-19 time series prediction and modelling. Epidemiol Infect 2024; 152:e146. [PMID: 39575546 PMCID: PMC11626461 DOI: 10.1017/s0950268824000992] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Revised: 05/29/2024] [Accepted: 06/20/2024] [Indexed: 12/11/2024] Open
Abstract
Since the outbreak of the COVID-19 epidemic, it has posed a great crisis to the health and economy of the world. The objective is to provide a simple deep-learning approach for predicting, modelling, and evaluating the time evolutions of the COVID-19 epidemic. The Dove Swarm Search (DSS) algorithm is integrated with the echo state network (ESN) to optimize the weight. The ESN-DSS model is constructed to predict the evolution of the COVID-19 time series. Specifically, the self-driven ESN-DSS is created to form a closed feedback loop by replacing the input with the output. The prediction results, which involve COVID-19 temporal evolutions of multiple countries worldwide, indicate the excellent prediction performances of our model compared with several artificial intelligence prediction methods from the literature (e.g., recurrent neural network, long short-term memory, gated recurrent units, variational auto encoder) at the same time scale. Moreover, the model parameters of the self-driven ESN-DSS are determined which acts as a significant impact on the prediction performance. As a result, the network parameters are adjusted to improve the prediction accuracy. The prediction results can be used as proposals to help governments and medical institutions formulate pertinent precautionary measures to prevent further spread. In addition, this study is not only limited to COVID-19 time series forecasting but also applicable to other nonlinear time series prediction problems.
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Affiliation(s)
- Weiye Wang
- School of Automation, Beijing Information Science and Technology University, Beijing, China
- Ministry of Education Key Laboratory of Modern Measurement and Control Technology, Beijing, China
| | - Qing Li
- School of Automation, Beijing Information Science and Technology University, Beijing, China
- Ministry of Education Key Laboratory of Modern Measurement and Control Technology, Beijing, China
| | - Junsong Wang
- College of Big Data and Internet, Shenzhen Technology University, Shenzhen, China
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2
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Khan R, Taj S, Ma X, Noor A, Zhu H, Khan J, Khan ZU, Khan SU. Advanced federated ensemble internet of learning approach for cloud based medical healthcare monitoring system. Sci Rep 2024; 14:26068. [PMID: 39478132 PMCID: PMC11526108 DOI: 10.1038/s41598-024-77196-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Accepted: 10/21/2024] [Indexed: 11/02/2024] Open
Abstract
Medical image machines serve as a valuable tool to monitor and diagnose a variety of diseases. However, manual and centralized interpretation are both error-prone and time-consuming due to malicious attacks. Numerous diagnostic algorithms have been developed to improve precision and prevent poisoning attacks by integrating symptoms, test methods, and imaging data. But in today's digital technology world, it is necessary to have a global cloud-based diagnostic artificial intelligence model that is efficient in diagnosis and preventing poisoning attacks and might be used for multiple purposes. We propose the Healthcare Federated Ensemble Internet of Learning Cloud Doctor System (FDEIoL) model, which integrates different Internet of Things (IoT) devices to provide precise and accurate interpretation without poisoning attack problems, thereby facilitating IoT-enabled remote patient monitoring for smart healthcare systems. Furthermore, the FDEIoL system model uses a federated ensemble learning strategy to provide an automatic, up-to-date global prediction model based on input local models from the medical specialist. This assures biomedical security by safeguarding patient data and preserving the integrity of diagnostic processes. The FDEIoL system model utilizes local model feature selection to discriminate between malicious and non-malicious local models, and ensemble strategies use positive and negative samples to optimize the performance of the test dataset, enhancing its capability for remote patient monitoring. The FDEIoL system model achieved an exceptional accuracy rate of 99.24% on the Chest X-ray dataset and 99.0% on the MRI dataset of brain tumors compared to centralized models, demonstrating its ability for precision diagnosis in IoT-enabled healthcare systems.
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Affiliation(s)
- Rahim Khan
- College of Information and Communication Engineering, Harbin Engineering University, Harbin150001, China
| | - Sher Taj
- Software College, Northeastern University, Shenyang, 110169, China
| | - Xuefei Ma
- College of Information and Communication Engineering, Harbin Engineering University, Harbin150001, China.
| | - Alam Noor
- CISTER Research Center, Porto, Portugal
| | - Haifeng Zhu
- College of Information and Communication Engineering, Harbin Engineering University, Harbin150001, China
| | - Javed Khan
- Department of software Engineering, University of Science and Technology, Bannu, KPK, Pakistan
| | - Zahid Ullah Khan
- College of Information and Communication Engineering, Harbin Engineering University, Harbin150001, China
| | - Sajid Ullah Khan
- Department of Information Systems, College of Computer Engineering and Sciences, Prince Sattam bin Abdulaziz University, Alkharj, KSA, Saudi Arabia
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3
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Shen X, Liu H. Using machine learning for early detection of chronic obstructive pulmonary disease: a narrative review. Respir Res 2024; 25:336. [PMID: 39252086 PMCID: PMC11385799 DOI: 10.1186/s12931-024-02960-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2024] [Accepted: 08/23/2024] [Indexed: 09/11/2024] Open
Abstract
Chronic obstructive pulmonary disease (COPD) is a prevalent respiratory disease and ranks third in global mortality rates, imposing a significant burden on patients and society. This review looks at recent research, both domestically and abroad, on the application of machine learning (ML) for early COPD screening. The review discusses the practical application, key optimization points, and prospects of ML techniques in early COPD screening. The aim is to establish a scientific foundation and reference framework for future research and the development of screening strategies.
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Affiliation(s)
- Xueting Shen
- Department of General Medicine, The First Affiliated Hospital of Nanchang University, Nanchang, 330000, China
| | - Huanbing Liu
- Department of General Medicine, The First Affiliated Hospital of Nanchang University, Nanchang, 330000, China.
- Department of General Practice, The First Affiliated Hospital of Nanchang University, Nanchang, 330000, China.
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Sultan S, Acharya Y, Zayed O, Elzomour H, Parodi JC, Soliman O, Hynes N. Is the Cardiovascular Specialist Ready For the Fifth Revolution? The Role of Artificial Intelligence, Machine Learning, Big Data Analysis, Intelligent Swarming, and Knowledge-Centered Service on the Future of Global Cardiovascular Healthcare Delivery. J Endovasc Ther 2023; 30:877-884. [PMID: 35695277 PMCID: PMC10637093 DOI: 10.1177/15266028221102660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Affiliation(s)
- Sherif Sultan
- Western Vascular Institute, Department of Vascular and Endovascular Surgery, University Hospital Galway, National University of Ireland, Galway, Galway, Ireland
- Department of Vascular Surgery and Endovascular Surgery, Galway Clinic, Royal College of Surgeons in Ireland and National University of Ireland, Galway Affiliated Hospital, Galway, Ireland
- CORRIB-CÚRAM-Vascular Group, National University of Ireland, Galway, Galway, Ireland
| | - Yogesh Acharya
- Western Vascular Institute, Department of Vascular and Endovascular Surgery, University Hospital Galway, National University of Ireland, Galway, Galway, Ireland
- Department of Vascular Surgery and Endovascular Surgery, Galway Clinic, Royal College of Surgeons in Ireland and National University of Ireland, Galway Affiliated Hospital, Galway, Ireland
| | - Omnia Zayed
- Data Science Institute, National University of Ireland, Galway, Galway, Ireland
| | - Hesham Elzomour
- Discipline of Cardiology, CORRIB-CÚRAM-Vascular Group, National University of Ireland, Galway, Galway, Ireland
| | - Juan Carlos Parodi
- Department of Vascular Surgery and Biomedical Engineering Department, Alma Mater, University of Buenos Aires, and Trinidad Hospital, Buenos Aires, Argentina
| | - Osama Soliman
- Discipline of Cardiology, CORRIB-CÚRAM-Vascular Group, National University of Ireland, Galway, Galway, Ireland
| | - Niamh Hynes
- CORRIB-CÚRAM-Vascular Group, National University of Ireland, Galway, Galway, Ireland
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5
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Gaidai O, Yakimov V, van Loon EJ. Influenza-type epidemic risks by spatio-temporal Gaidai-Yakimov method. DIALOGUES IN HEALTH 2023; 3:100157. [PMID: 39831026 PMCID: PMC11742348 DOI: 10.1016/j.dialog.2023.100157] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/20/2023] [Revised: 09/24/2023] [Accepted: 10/24/2023] [Indexed: 01/22/2025]
Abstract
Background Global public health was recently hampered by reported widespread spread of new coronavirus illness, although morbidity and fatality rates were low. Future coronavirus infection rates may be accurately predicted over a long-time horizon, using novel bio-reliability approach, being especially well suitable for environmental multi-regional health and biological systems. The high regional dimensionality along with cross-correlations between various regional datasets being challenging for conventional statistical tools to manage. Methods To assess future risks of epidemiological outbreak in any province of interest, novel spatio-temporal technique has been proposed. In a multicenter, population-based environment, assess raw clinical data using state-of-the-art, cutting-edge statistical methodologies. Results Authors have developed novel reliable long-term risk assessment methodology for future coronavirus infection outbreaks. Conclusions Based on national clinical patient monitoring raw dataset, it is concluded that although underlying data set data quality is questionable, the proposed method may be still applied.
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Affiliation(s)
| | - Vladimir Yakimov
- Central Marine Research and Design Institute, Saint Petersburg, Russia
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Whitney HM, Baughan N, Myers KJ, Drukker K, Gichoya J, Bower B, Chen W, Gruszauskas N, Kalpathy-Cramer J, Koyejo S, Sá RC, Sahiner B, Zhang Z, Giger ML. Longitudinal assessment of demographic representativeness in the Medical Imaging and Data Resource Center open data commons. J Med Imaging (Bellingham) 2023; 10:61105. [PMID: 37469387 PMCID: PMC10353566 DOI: 10.1117/1.jmi.10.6.061105] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 06/21/2023] [Accepted: 06/23/2023] [Indexed: 07/21/2023] Open
Abstract
Purpose The Medical Imaging and Data Resource Center (MIDRC) open data commons was launched to accelerate the development of artificial intelligence (AI) algorithms to help address the COVID-19 pandemic. The purpose of this study was to quantify longitudinal representativeness of the demographic characteristics of the primary MIDRC dataset compared to the United States general population (US Census) and COVID-19 positive case counts from the Centers for Disease Control and Prevention (CDC). Approach The Jensen-Shannon distance (JSD), a measure of similarity of two distributions, was used to longitudinally measure the representativeness of the distribution of (1) all unique patients in the MIDRC data to the 2020 US Census and (2) all unique COVID-19 positive patients in the MIDRC data to the case counts reported by the CDC. The distributions were evaluated in the demographic categories of age at index, sex, race, ethnicity, and the combination of race and ethnicity. Results Representativeness of the MIDRC data by ethnicity and the combination of race and ethnicity was impacted by the percentage of CDC case counts for which this was not reported. The distributions by sex and race have retained their level of representativeness over time. Conclusion The representativeness of the open medical imaging datasets in the curated public data commons at MIDRC has evolved over time as the number of contributing institutions and overall number of subjects have grown. The use of metrics, such as the JSD support measurement of representativeness, is one step needed for fair and generalizable AI algorithm development.
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Affiliation(s)
- Heather M. Whitney
- University of Chicago, Chicago, Illinois, United States
- The Medical Imaging and Data Resource Center (midrc.org)
| | - Natalie Baughan
- University of Chicago, Chicago, Illinois, United States
- The Medical Imaging and Data Resource Center (midrc.org)
| | - Kyle J. Myers
- The Medical Imaging and Data Resource Center (midrc.org)
- Puente Solutions LLC, Phoenix, Arizona, United States
| | - Karen Drukker
- University of Chicago, Chicago, Illinois, United States
- The Medical Imaging and Data Resource Center (midrc.org)
| | - Judy Gichoya
- The Medical Imaging and Data Resource Center (midrc.org)
- Emory University, Atlanta, Georgia, United States
| | - Brad Bower
- The Medical Imaging and Data Resource Center (midrc.org)
- National Institutes of Health, Bethesda, Maryland, United States
| | - Weijie Chen
- The Medical Imaging and Data Resource Center (midrc.org)
- United States Food and Drug Administration, Silver Spring, Maryland, United States
| | - Nicholas Gruszauskas
- University of Chicago, Chicago, Illinois, United States
- The Medical Imaging and Data Resource Center (midrc.org)
| | - Jayashree Kalpathy-Cramer
- The Medical Imaging and Data Resource Center (midrc.org)
- University of Colorado Anschutz Medical Campus, Aurora, Colorado, United States
| | - Sanmi Koyejo
- The Medical Imaging and Data Resource Center (midrc.org)
- Stanford University, Stanford, California, United States
| | - Rui C. Sá
- The Medical Imaging and Data Resource Center (midrc.org)
- National Institutes of Health, Bethesda, Maryland, United States
- University of California, San Diego, La Jolla, California, United States
| | - Berkman Sahiner
- The Medical Imaging and Data Resource Center (midrc.org)
- United States Food and Drug Administration, Silver Spring, Maryland, United States
| | - Zi Zhang
- The Medical Imaging and Data Resource Center (midrc.org)
- Jefferson Health, Philadelphia, Pennsylvania, United States
| | - Maryellen L. Giger
- University of Chicago, Chicago, Illinois, United States
- The Medical Imaging and Data Resource Center (midrc.org)
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7
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Drukker K, Chen W, Gichoya J, Gruszauskas N, Kalpathy-Cramer J, Koyejo S, Myers K, Sá RC, Sahiner B, Whitney H, Zhang Z, Giger M. Toward fairness in artificial intelligence for medical image analysis: identification and mitigation of potential biases in the roadmap from data collection to model deployment. J Med Imaging (Bellingham) 2023; 10:061104. [PMID: 37125409 PMCID: PMC10129875 DOI: 10.1117/1.jmi.10.6.061104] [Citation(s) in RCA: 33] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Accepted: 04/03/2023] [Indexed: 05/02/2023] Open
Abstract
Purpose To recognize and address various sources of bias essential for algorithmic fairness and trustworthiness and to contribute to a just and equitable deployment of AI in medical imaging, there is an increasing interest in developing medical imaging-based machine learning methods, also known as medical imaging artificial intelligence (AI), for the detection, diagnosis, prognosis, and risk assessment of disease with the goal of clinical implementation. These tools are intended to help improve traditional human decision-making in medical imaging. However, biases introduced in the steps toward clinical deployment may impede their intended function, potentially exacerbating inequities. Specifically, medical imaging AI can propagate or amplify biases introduced in the many steps from model inception to deployment, resulting in a systematic difference in the treatment of different groups. Approach Our multi-institutional team included medical physicists, medical imaging artificial intelligence/machine learning (AI/ML) researchers, experts in AI/ML bias, statisticians, physicians, and scientists from regulatory bodies. We identified sources of bias in AI/ML, mitigation strategies for these biases, and developed recommendations for best practices in medical imaging AI/ML development. Results Five main steps along the roadmap of medical imaging AI/ML were identified: (1) data collection, (2) data preparation and annotation, (3) model development, (4) model evaluation, and (5) model deployment. Within these steps, or bias categories, we identified 29 sources of potential bias, many of which can impact multiple steps, as well as mitigation strategies. Conclusions Our findings provide a valuable resource to researchers, clinicians, and the public at large.
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Affiliation(s)
- Karen Drukker
- The University of Chicago, Department of Radiology, Chicago, Illinois, United States
| | - Weijie Chen
- US Food and Drug Administration, Division of Imaging, Diagnostics, and Software Reliability, Office of Science and Engineering Laboratories, Center for Devices and Radiological Health, Silver Spring, Maryland, United States
| | - Judy Gichoya
- Emory University, Department of Radiology, Atlanta, Georgia, United States
| | - Nicholas Gruszauskas
- The University of Chicago, Department of Radiology, Chicago, Illinois, United States
| | | | - Sanmi Koyejo
- Stanford University, Department of Computer Science, Stanford, California, United States
| | - Kyle Myers
- Puente Solutions LLC, Phoenix, Arizona, United States
| | - Rui C. Sá
- National Institutes of Health, Bethesda, Maryland, United States
- University of California, San Diego, La Jolla, California, United States
| | - Berkman Sahiner
- US Food and Drug Administration, Division of Imaging, Diagnostics, and Software Reliability, Office of Science and Engineering Laboratories, Center for Devices and Radiological Health, Silver Spring, Maryland, United States
| | - Heather Whitney
- The University of Chicago, Department of Radiology, Chicago, Illinois, United States
| | - Zi Zhang
- Jefferson Health, Philadelphia, Pennsylvania, United States
| | - Maryellen Giger
- The University of Chicago, Department of Radiology, Chicago, Illinois, United States
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8
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Patel M, Surti M, Adnan M. Artificial intelligence (AI) in Monkeypox infection prevention. J Biomol Struct Dyn 2023; 41:8629-8633. [PMID: 36218112 PMCID: PMC9627635 DOI: 10.1080/07391102.2022.2134214] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Accepted: 10/03/2022] [Indexed: 11/08/2022]
Abstract
Monkeypox is a possible public health concern that requires appropriate attention in order to prevent the spread of the disease. Currently, artificial intelligence (AI) is making a significant impact on precision medicine, reshaping and integrating the large amount of data derived from multiomics analyses and revolutionizing the deep-learning strategies. There has been a significant progress in the use of AI to detect, screen, diagnose, and classify diseases, characterize virus genomes, assess biomarkers for prognostic and predictive purposes, and develop follow-up strategies. Hence, it is possible to use AI for the identification of disease clusters, cases monitoring, forecasting the future outbreak, determining mortality risk, diagnosing, managing, and identifying patterns for studying disease trends. AI may also be utilized to assist gene therapy and other therapies that we are not currently able to use in healthcare. It is possible to combine pharmacology and gene therapy with regenerative medicine with the help of AI. It will directly benefit the public in overcoming fear and panic of health risks. Therefore, AI can be an effective weapon to fight against Monkeypox infection, and may prove to be an invaluable future tool in improving the clinical management of patients. Key Points: Emergence and spread of the Monkeypox virus is a new public health crisis; threatening the world. This opinion piece highlights the urgently required information for immediate delivery of solutions on controlling and monitoring the spread of Monkeypox infection through Artificial IntelligenceCommunicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Mitesh Patel
- Department of Biotechnology, Parul Institute of Applied Sciences and Centre of Research for Development, Parul University, Vadodara, Gujarat, India
| | - Malvi Surti
- Bapalal Vaidya Botanical Research Centre, Department of Biosciences, Veer Narmad South Gujarat University, Surat, Gujarat, India
| | - Mohd Adnan
- Department of Biology, College of Science, University of Hail, Hail, Saudi Arabia
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Naz M, Shah MA, Khattak HA, Wahid A, Asghar MN, Rauf HT, Khan MA, Ameer Z. Multi‐branch sustainable convolutional neural network for disease classification. INTERNATIONAL JOURNAL OF IMAGING SYSTEMS AND TECHNOLOGY 2023; 33:1621-1633. [DOI: 10.1002/ima.22884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Accepted: 03/18/2023] [Indexed: 08/25/2024]
Abstract
AbstractPandemic and natural disasters are growing more often, imposing even more pressure on life care services and users. There are knowledge gaps regarding how to prevent disasters and pandemics. In recent years, after heart disease, corona virus disease‐19 (COVID‐19), brain stroke, and cancer are at their peak. Different machine learning and deep learning‐based techniques are presented to detect these diseases. Existing technique uses two branches that have been used for detection and prediction of disease accurately such as brain hemorrhage. However, existing techniques have been focused on the detection of specific diseases with double‐branches convolutional neural networks (CNNs). There is a need to develop a model to detect multiple diseases at the same time using computerized tomography (CT) scan images. We proposed a model that consists of 12 branches of CNN to detect the different types of diseases with their subtypes using CT scan images and classify them more accurately. We proposed multi‐branch sustainable CNN model with deep learning architecture trained on the brain CT hemorrhage, COVID‐19 lung CT scans and chest CT scans with subtypes of lung cancers. Feature extracted automatically from preprocessed input data and passed to classifiers for classification in the form of concatenated feature vectors. Six classifiers support vector machine (SVM), decision tree (DT), K‐nearest neighbor (K‐NN), artificial neural network (ANN), naïve Bayes (NB), linear regression (LR) classifiers, and three ensembles the random forest (RF), AdaBoost, gradient boosting ensembles were tested on our model for classification and prediction. Our model achieved the best results on RF on each dataset. Respectively, on brain CT hemorrhage achieved (99.79%) accuracy, on COVID‐19 lung CT scans achieved (97.61%), and on chest CT scans dataset achieved (98.77%).
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Affiliation(s)
- Maria Naz
- Department of Computer Science COMSATS University Islamabad Islamabad Pakistan
| | - Munam Ali Shah
- Department of Computer Science COMSATS University Islamabad Islamabad Pakistan
| | - Hasan Ali Khattak
- School of Electrical Engineering & Computer Science (SEECS) National University of Sciences and Technology (NUST) 44500 Islamabad Pakistan
| | - Abdul Wahid
- School of Electrical Engineering & Computer Science (SEECS) National University of Sciences and Technology (NUST) 44500 Islamabad Pakistan
- School of Computer Science University of Birmingham Dubai United Arab Emirates
| | | | - Hafiz Tayyab Rauf
- Centre for Smart Systems, AI and Cybersecurity Staffordshire University ST4 2DE Stoke‐on‐Trent UK
| | | | - Zoobia Ameer
- Shaheed Benazir Bhutto Women University Peshawar Peshawar Pakistan
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Santosh KC, GhoshRoy D, Nakarmi S. A Systematic Review on Deep Structured Learning for COVID-19 Screening Using Chest CT from 2020 to 2022. Healthcare (Basel) 2023; 11:2388. [PMID: 37685422 PMCID: PMC10486542 DOI: 10.3390/healthcare11172388] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Revised: 08/16/2023] [Accepted: 08/22/2023] [Indexed: 09/10/2023] Open
Abstract
The emergence of the COVID-19 pandemic in Wuhan in 2019 led to the discovery of a novel coronavirus. The World Health Organization (WHO) designated it as a global pandemic on 11 March 2020 due to its rapid and widespread transmission. Its impact has had profound implications, particularly in the realm of public health. Extensive scientific endeavors have been directed towards devising effective treatment strategies and vaccines. Within the healthcare and medical imaging domain, the application of artificial intelligence (AI) has brought significant advantages. This study delves into peer-reviewed research articles spanning the years 2020 to 2022, focusing on AI-driven methodologies for the analysis and screening of COVID-19 through chest CT scan data. We assess the efficacy of deep learning algorithms in facilitating decision making processes. Our exploration encompasses various facets, including data collection, systematic contributions, emerging techniques, and encountered challenges. However, the comparison of outcomes between 2020 and 2022 proves intricate due to shifts in dataset magnitudes over time. The initiatives aimed at developing AI-powered tools for the detection, localization, and segmentation of COVID-19 cases are primarily centered on educational and training contexts. We deliberate on their merits and constraints, particularly in the context of necessitating cross-population train/test models. Our analysis encompassed a review of 231 research publications, bolstered by a meta-analysis employing search keywords (COVID-19 OR Coronavirus) AND chest CT AND (deep learning OR artificial intelligence OR medical imaging) on both the PubMed Central Repository and Web of Science platforms.
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Affiliation(s)
- KC Santosh
- 2AI: Applied Artificial Intelligence Research Lab, Vermillion, SD 57069, USA
| | - Debasmita GhoshRoy
- School of Automation, Banasthali Vidyapith, Tonk 304022, Rajasthan, India;
| | - Suprim Nakarmi
- Department of Computer Science, University of South Dakota, Vermillion, SD 57069, USA;
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Mozafari N, Mozafari N, Dehshahri A, Azadi A. Knowledge Gaps in Generating Cell-Based Drug Delivery Systems and a Possible Meeting with Artificial Intelligence. Mol Pharm 2023; 20:3757-3778. [PMID: 37428824 DOI: 10.1021/acs.molpharmaceut.3c00162] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/12/2023]
Abstract
Cell-based drug delivery systems are new strategies in targeted delivery in which cells or cell-membrane-derived systems are used as carriers and release their cargo in a controlled manner. Recently, great attention has been directed to cells as carrier systems for treating several diseases. There are various challenges in the development of cell-based drug delivery systems. The prediction of the properties of these platforms is a prerequisite step in their development to reduce undesirable effects. Integrating nanotechnology and artificial intelligence leads to more innovative technologies. Artificial intelligence quickly mines data and makes decisions more quickly and accurately. Machine learning as a subset of the broader artificial intelligence has been used in nanomedicine to design safer nanomaterials. Here, how challenges of developing cell-based drug delivery systems can be solved with potential predictive models of artificial intelligence and machine learning is portrayed. The most famous cell-based drug delivery systems and their challenges are described. Last but not least, artificial intelligence and most of its types used in nanomedicine are highlighted. The present Review has shown the challenges of developing cells or their derivatives as carriers and how they can be used with potential predictive models of artificial intelligence and machine learning.
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Affiliation(s)
- Negin Mozafari
- Department of Pharmaceutics, School of Pharmacy, Shiraz University of Medical Sciences, 71468 64685 Shiraz, Iran
| | - Niloofar Mozafari
- Design and System Operations Department, Regional Information Center for Science and Technology, 71946 94171 Shiraz, Iran
| | - Ali Dehshahri
- Department of Pharmaceutical Biotechnology, School of Pharmacy, Shiraz University of Medical Sciences, 71468 64685 Shiraz, Iran
- Pharmaceutical Sciences Research Centre, Shiraz University of Medical Sciences, 71468 64685 Shiraz, Iran
| | - Amir Azadi
- Department of Pharmaceutics, School of Pharmacy, Shiraz University of Medical Sciences, 71468 64685 Shiraz, Iran
- Pharmaceutical Sciences Research Centre, Shiraz University of Medical Sciences, 71468 64685 Shiraz, Iran
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12
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Ngo HG, Nair GB, Al-Katib S. Impact of a structured reporting template on the quality of HRCT radiology reports for interstitial lung disease. Clin Imaging 2023; 97:78-83. [PMID: 36921449 DOI: 10.1016/j.clinimag.2023.03.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Revised: 02/26/2023] [Accepted: 03/01/2023] [Indexed: 03/09/2023]
Abstract
PURPOSE This QI study compared the completeness of HRCT radiology reports before and after the implementation of a disease-specific structured reporting template for suspected cases of interstitial lung disease (ILD). MATERIALS AND METHODS A pre-post study of radiology reports for HRCT of the thorax at a multicenter health system was performed. Data was collected in 6-month period intervals before (June 2019-November 2019) and after (January 2021-June 2021) the implementation of a disease-specific template. The use of the template was voluntary. The primary outcome measure was the completeness of HRCT reports graded based on the documentation of ten descriptors. The secondary outcome measure assessed which descriptor(s) improved after the intervention. RESULTS 521 HRCT reports before and 557 HRCT reports after the intervention were reviewed. Of the 557 reports, 118 reports (21%) were created using the structured reporting template. The mean completeness score of the pre-intervention group was 9.20 (SD = 1.08) and the post-intervention group was 9.36 (SD = 1.03) with a difference of -0.155, 95% CI [-0.2822, -0.0285, p < 0.0001]. Within the post-intervention group, the mean completeness score of the unstructured reports was 9.25 (SD = 1.07) and the template reports was 9.93 (SD = 0.25) with a difference of -0.677, 95% CI [-0.7871, -0.5671, p < 0.0001]. After the intervention, the use of two descriptors improved significantly: presence of honeycombing from 78.3% to 85.1% (p < 0.0039) and technique from 90% to 96.6% (p < 0.0001). DISCUSSION Shifting to disease-specific structured reporting for HRCT exams of suspected ILD is beneficial, as it improves the completeness of radiology reports. Further research on how to improve the voluntary uptake of a disease-specific template is needed to help increase the acceptance of structured reporting among radiologists.
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Affiliation(s)
- Han G Ngo
- Oakland University William Beaumont School of Medicine, Rochester, MI, United States of America.
| | - Girish B Nair
- Department of Pulmonary and Critical Care Medicine, Corewell Health William Beaumont University Hospital, Oakland University William Beaumont School of Medicine, Royal Oak, MI, United States of America
| | - Sayf Al-Katib
- Department of Radiology and Molecular Imaging, Corewell Health William Beaumont University Hospital, Oakland University William Beaumont School of Medicine, Royal Oak, MI, United States of America
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13
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Karbasi Z, Gohari SH, Sabahi A. Bibliometric analysis of the use of artificial intelligence in COVID-19 based on scientific studies. Health Sci Rep 2023; 6:e1244. [PMID: 37152228 PMCID: PMC10158785 DOI: 10.1002/hsr2.1244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Revised: 04/11/2023] [Accepted: 04/16/2023] [Indexed: 05/09/2023] Open
Abstract
Background and Aims One such strategy is citation analysis used by researchers for research planning an article referred to by another article receives a "citation." By using bibliometric analysis, the development of research areas and authors' influence can be investigated. The current study aimed to identify and analyze the characteristics of 100 highly cited articles on the use of artificial intelligence concerning COVID-19. Methods On July 27, 2022, this database was searched using the keywords "artificial intelligence" and "COVID-19" in the topic. After extensive searching, all retrieved articles were sorted by the number of citations, and 100 highly cited articles were included based on the number of citations. The following data were extracted: year of publication, type of study, name of journal, country, number of citations, language, and keywords. Results The average number of citations for 100 highly cited articles was 138.54. The top three cited articles with 745, 596, and 549 citations. The top 100 articles were all in English and were published in 2020 and 2021. China was the most prolific country with 19 articles, followed by the United States with 15 articles and India with 10 articles. Conclusion The current bibliometric analysis demonstrated the significant growth of the use of artificial intelligence for COVID-19. Using these results, research priorities are more clearly defined, and researchers can focus on hot topics.
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Affiliation(s)
- Zahra Karbasi
- Medical Informatics Research Center, Institute for Futures Studies in HealthKerman University of Medical SciencesKermanIran
- Department of Health Information Sciences, Faculty of Management and Medical Information SciencesKerman University of Medical SciencesKermanIran
| | - Sadrieh H. Gohari
- Medical Informatics Research Center, Institute for Futures Studies in HealthKerman University of Medical SciencesKermanIran
| | - Azam Sabahi
- Department of Health Information Technology, Ferdows School of Health and Allied Medical SciencesBirjand University of Medical SciencesBirjandIran
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14
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Zgheib R, Chahbandarian G, Kamalov F, Messiry HE, Al-Gindy A. Towards an ML-based semantic IoT for pandemic management: A survey of enabling technologies for COVID-19. Neurocomputing 2023; 528:160-177. [PMID: 36647510 PMCID: PMC9833856 DOI: 10.1016/j.neucom.2023.01.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Revised: 12/03/2022] [Accepted: 01/08/2023] [Indexed: 01/13/2023]
Abstract
The connection between humans and digital technologies has been documented extensively in the past decades but needs to be evaluated through the current global pandemic. Artificial Intelligence(AI), with its two strands, Machine Learning (ML) and Semantic Reasoning, has proven to be a great solution to provide efficient ways to prevent, diagnose and limit the spread of COVID-19. IoT solutions have been widely proposed for COVID-19 disease monitoring, infection geolocation, and social applications. In this paper, we investigate the usage of the three technologies for handling the COVID-19 pandemic. For this purpose, we surveyed the existing ML applications and algorithms proposed during the pandemic to detect COVID-19 disease using symptom factors and image processing. The survey includes existing approaches including semantic technologies and IoT systems for COVID-19. Based on the survey result, we classified the main challenges and the solutions that could solve them. The study proposes a conceptual framework for pandemic management and discusses challenges and trends for future research.
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Affiliation(s)
- Rita Zgheib
- Department of Computer Engineering, Canadian University Dubai, Dubai, United Arab Emirates
| | | | - Firuz Kamalov
- Department of Electrical Engineering, Canadian University Dubai, Dubai, United Arab Emirates
| | - Haythem El Messiry
- University of Science and Technology of Fujairah, Fujairah, United Arab Emirates
- University of Ain Shams, Cairo, Egypt
| | - Ahmed Al-Gindy
- Department of Electrical Engineering, Canadian University Dubai, Dubai, United Arab Emirates
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15
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Shukla AK, Seth T, Muhuri PK. Artificial intelligence centric scientific research on COVID-19: an analysis based on scientometrics data. MULTIMEDIA TOOLS AND APPLICATIONS 2023; 82:1-33. [PMID: 37362722 PMCID: PMC9978294 DOI: 10.1007/s11042-023-14642-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Revised: 07/01/2022] [Accepted: 02/03/2023] [Indexed: 06/28/2023]
Abstract
With the spread of the deadly coronavirus disease throughout the geographies of the globe, expertise from every field has been sought to fight the impact of the virus. The use of Artificial Intelligence (AI), especially, has been the center of attention due to its capability to produce trustworthy results in a reasonable time. As a result, AI centric based research on coronavirus (or COVID-19) has been receiving growing attention from different domains ranging from medicine, virology, and psychiatry etc. We present this comprehensive study that closely monitors the impact of the pandemic on global research activities related exclusively to AI. In this article, we produce highly informative insights pertaining to publications, such as the best articles, research areas, most productive and influential journals, authors, and institutions. Studies are made on top 50 most cited articles to identify the most influential AI subcategories. We also study the outcome of research from different geographic areas while identifying the research collaborations that have had an impact. This study also compares the outcome of research from the different countries around the globe and produces insights on the same.
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Affiliation(s)
- Amit K. Shukla
- Faculty of Information Technology, University of Jyväskylä, Box 35 (Agora), Jyväskylä, 40014 Finland
| | - Taniya Seth
- Department of Computer Science, South Asian University, Akbar Bhawan, Chanakyapuri, New Delhi 110021 India
| | - Pranab K. Muhuri
- Department of Computer Science, South Asian University, Akbar Bhawan, Chanakyapuri, New Delhi 110021 India
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16
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Makkar A, Santosh KC. SecureFed: federated learning empowered medical imaging technique to analyze lung abnormalities in chest X-rays. INT J MACH LEARN CYB 2023; 14:1-12. [PMID: 36817940 PMCID: PMC9928498 DOI: 10.1007/s13042-023-01789-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Accepted: 01/20/2023] [Indexed: 02/16/2023]
Abstract
Machine learning is an effective and accurate technique to diagnose COVID-19 infections using image data, and chest X-Ray (CXR) is no exception. Considering privacy issues, machine learning scientists end up receiving less medical imaging data. Federated Learning (FL) is a privacy-preserving distributed machine learning paradigm that generates an unbiased global model that follows local model (from clients) without exposing their personal data. In the case of heterogeneous data among clients, vanilla or default FL mechanism still introduces an insecure method for updating models. Therefore, we proposed SecureFed-a secure aggregation method-which ensures fairness and robustness. In our experiments, we employed COVID-19 CXR dataset (of size 2100 positive cases) and compared it with the existing FL frameworks such as FedAvg, FedMGDA+, and FedRAD. In our comparison, we primarily considered robustness (accuracy) and fairness (consistency). As the SecureFed produced consistently better results, it is generic enough to be considered for multimodal data.
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Affiliation(s)
- Aaisha Makkar
- College of Science and Engineering, University of Derby, Kedleston Rd, Derby, DE22 1GB UK
| | - KC Santosh
- Applied AI Research Lab, Department of Computer Science, University of South Dakota, 414 E Clark St, Vermillion, SD 57069 USA
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17
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Roy S, Santosh KC. Analyzing Overlaid Foreign Objects in Chest X-rays-Clinical Significance and Artificial Intelligence Tools. Healthcare (Basel) 2023; 11:healthcare11030308. [PMID: 36766883 PMCID: PMC9914243 DOI: 10.3390/healthcare11030308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Revised: 01/16/2023] [Accepted: 01/16/2023] [Indexed: 01/20/2023] Open
Abstract
The presence of non-biomedical foreign objects (NBFO), such as coins, buttons and jewelry, and biomedical foreign objects (BFO), such as medical tubes and devices in chest X-rays (CXRs), make accurate interpretation difficult, as they do not indicate known biological abnormalities like excess fluids, tuberculosis (TB) or cysts. Such foreign objects need to be detected, localized, categorized as either NBFO or BFO, and removed from CXR or highlighted in CXR for effective abnormality analysis. Very specifically, NBFOs can adversely impact the process, as typical machine learning algorithms would consider these objects to be biological abnormalities producing false-positive cases. It holds true for BFOs in CXRs. This paper examines detailed discussions on numerous clinical reports in addition to computer-aided detection (CADe) with diagnosis (CADx) tools, where both shallow learning and deep learning algorithms are applied. Our discussion reflects the importance of accurately detecting, isolating, classifying, and either removing or highlighting NBFOs and BFOs in CXRs by taking 29 peer-reviewed research reports and articles into account.
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18
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Vinod DN, Prabaharan SRS. COVID-19-The Role of Artificial Intelligence, Machine Learning, and Deep Learning: A Newfangled. ARCHIVES OF COMPUTATIONAL METHODS IN ENGINEERING : STATE OF THE ART REVIEWS 2023; 30:2667-2682. [PMID: 36685135 PMCID: PMC9843670 DOI: 10.1007/s11831-023-09882-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Accepted: 01/05/2023] [Indexed: 05/29/2023]
Abstract
The absolute previously infected novel coronavirus (COVID-19) was found in Wuhan, China, in December 2019. The COVID-19 epidemic has spread to more than 220 nations and territories globally and has altogether influenced each part of our day-to-day lives. As of 9th March 2022, a total aggregate of 44,78,82,185 (60,07,317) contaminated (dead) COVID-19 cases were accounted for all over the world. The quantities of contaminated cases passing despite everything increment essentially and do not indicate a controlled circumstance. The scope of this paper is to address this issue by presenting a comprehensive and comparative analysis of the existing Machine Learning (ML), Deep Learning (DL) and Artificial Intelligence (AI) based approaches used in significance in reacting to the COVID-19 epidemic and diagnosing the severe impacts. The paper provides, firstly, an overview of COVID-19 infection and highlights of this article; Secondly, an overview of exploring various executive innovations by utilizing different resources to stop the spread of COVID-19; Thirdly, a comparison of existing predicting methods of COVID-19 in the literature, with focus on ML, DL and AI-driven techniques with performance metrics; and finally, a discussion on the results of the work as well as future scope.
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Affiliation(s)
- Dasari Naga Vinod
- Department of Electronics and Communication Engineering, Vel Tech Rangarajan Dr. Sagunthala R&D Institute of Science and Technology, Avadi, Chennai, Tamil Nadu 600062 India
| | - S. R. S. Prabaharan
- Sathyabama Centre for Advanced Studies, Sathyabama Institute of Science and Technology, Rajiv Gandhi Salai, Chennai, Tamil Nadu 600119 India
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19
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Majrashi NAA. The value of chest X-ray and CT severity scoring systems in the diagnosis of COVID-19: A review. Front Med (Lausanne) 2023; 9:1076184. [PMID: 36714121 PMCID: PMC9877460 DOI: 10.3389/fmed.2022.1076184] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Accepted: 12/13/2022] [Indexed: 01/13/2023] Open
Abstract
Coronavirus disease 2019 (COVID-19) is caused by a coronavirus family member known as severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). The main laboratory test to confirm the quick diagnosis of COVID-19 infection is reverse transcription-polymerase chain reaction (RT-PCR) based on nasal or throat swab sampling. A small percentage of false-negative RT-PCR results have been reported. The RT-PCR test has a sensitivity of 50-72%, which could be attributed to a low viral load in test specimens or laboratory errors. In contrast, chest CT has shown 56-98% of sensitivity in diagnosing COVID-19 at initial presentation and has been suggested to be useful in correcting false negatives from RT-PCR. Chest X-rays and CT scans have been proposed to predict COVID-19 disease severity by displaying the score of lung involvement and thus providing information about the diagnosis and prognosis of COVID-19 infection. As a result, the current study provides a comprehensive overview of the utility of the severity score index using X-rays and CT scans in diagnosing patients with COVID-19 when compared to RT-PCR.
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20
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Yang H, Wang L, Xu Y, Liu X. CovidViT: a novel neural network with self-attention mechanism to detect Covid-19 through X-ray images. INT J MACH LEARN CYB 2023; 14:973-987. [PMID: 36274812 PMCID: PMC9580454 DOI: 10.1007/s13042-022-01676-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2021] [Accepted: 09/28/2022] [Indexed: 11/30/2022]
Abstract
Since the emergence of the novel coronavirus in December 2019, it has rapidly swept across the globe, with a huge impact on daily life, public health and the economy around the world. There is an urgent necessary for a rapid and economical detection method for the Covid-19. In this study, we used the transformers-based deep learning method to analyze the chest X-rays of normal, Covid-19 and viral pneumonia patients. Covid-Vision-Transformers (CovidViT) is proposed to detect Covid-19 cases through X-ray images. CovidViT is based on transformers block with the self-attention mechanism. In order to demonstrate its superiority, this research is also compared with other popular deep learning models, and the experimental result shows CovidViT outperforms other deep learning models and achieves 98.0% accuracy on test set, which means that the proposed model is excellent in Covid-19 detection. Besides, an online system for quick Covid-19 diagnosis is built on http://yanghang.site/covid19.
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Affiliation(s)
- Hang Yang
- College of Science, China Agricultural University, Beijing, 100083 China
| | - Liyang Wang
- School of Clinical Medicine, Tsinghua University, Beijing, 100084 China
| | - Yitian Xu
- College of Science, China Agricultural University, Beijing, 100083 China
| | - Xuhua Liu
- College of Science, China Agricultural University, Beijing, 100083 China
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21
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Castillo O, Castro JR, Melin P. Forecasting the COVID-19 with Interval Type-3 Fuzzy Logic and the Fractal Dimension. INTERNATIONAL JOURNAL OF FUZZY SYSTEMS 2023; 25:182-197. [PMCID: PMC9486798 DOI: 10.1007/s40815-022-01351-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Revised: 05/30/2022] [Accepted: 06/06/2022] [Indexed: 01/02/2024]
Abstract
In this article, the prediction of COVID-19 based on a combination of fractal theory and interval type-3 fuzzy logic is put forward. The fractal dimension is utilized to estimate the time series geometrical complexity level, which in this case is applied to the COVID-19 problem. The main aim of utilizing interval type-3 fuzzy logic is for handling uncertainty in the decision-making occurring in forecasting. The hybrid approach is formed by an interval type-3 fuzzy model structured by fuzzy if then rules that utilize as inputs the linear and non-linear values of the dimension, and the forecasts of COVID-19 cases are the outputs. The contribution is the new scheme based on the fractal dimension and interval type-3 fuzzy logic, which has not been proposed before, aimed at achieving an accurate forecasting of complex time series, in particular for the COVID-19 case. Publicly available data sets are utilized to construct the interval type-3 fuzzy system for a time series. The hybrid approach can be a helpful tool for decision maker in fighting the pandemic, as they could use the forecasts to decide immediate actions. The proposed method has been compared with previous works to show that interval type-3 fuzzy systems outperform previous methods in prediction.
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22
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Chakrabortty R, Pal SC, Ghosh M, Arabameri A, Saha A, Roy P, Pradhan B, Mondal A, Ngo PTT, Chowdhuri I, Yunus AP, Sahana M, Malik S, Das B. Weather indicators and improving air quality in association with COVID-19 pandemic in India. Soft comput 2023; 27:3367-3388. [PMID: 34276248 PMCID: PMC8276232 DOI: 10.1007/s00500-021-06012-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/28/2021] [Indexed: 12/13/2022]
Abstract
The COVID-19 pandemic enforced nationwide lockdown, which has restricted human activities from March 24 to May 3, 2020, resulted in an improved air quality across India. The present research investigates the connection between COVID-19 pandemic-imposed lockdown and its relation to the present air quality in India; besides, relationship between climate variables and daily new affected cases of Coronavirus and mortality in India during the this period has also been examined. The selected seven air quality pollutant parameters (PM10, PM2.5, CO, NO2, SO2, NH3, and O3) at 223 monitoring stations and temperature recorded in New Delhi were used to investigate the spatial pattern of air quality throughout the lockdown. The results showed that the air quality has improved across the country and average temperature and maximum temperature were connected to the outbreak of the COVID-19 pandemic. This outcomes indicates that there is no such relation between climatic parameters and outbreak and its associated mortality. This study will assist the policy maker, researcher, urban planner, and health expert to make suitable strategies against the spreading of COVID-19 in India and abroad. Supplementary Information The online version contains supplementary material available at 10.1007/s00500-021-06012-9.
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Affiliation(s)
- Rabin Chakrabortty
- Department of Geography, The University of Burdwan, Bardhaman, West Bengal India
| | - Subodh Chandra Pal
- Department of Geography, The University of Burdwan, Bardhaman, West Bengal India
| | - Manoranjan Ghosh
- Centre for Rural Development and Sustainable Innovative Technology, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal India
| | - Alireza Arabameri
- Department of Geomorphology, Tarbiat Modares University, 14117-13116 Tehran, Iran
| | - Asish Saha
- Department of Geography, The University of Burdwan, Bardhaman, West Bengal India
| | - Paramita Roy
- Department of Geography, The University of Burdwan, Bardhaman, West Bengal India
| | - Biswajeet Pradhan
- Centre for Advanced Modelling and Geospatial Information Systems (CAMGIS), Faculty of Engineering and Information Technology, University of Technology Sydney, Ultimo, NSW 2007 Australia ,Department of Energy and Mineral Resources Engineering, Sejong University, Choongmu-gwan, 209 Neungdong-ro, Gwangjin-gu, Seoul, 05006 Korea ,Center of Excellence for Climate Change Research, King Abdulaziz University, P.O. Box 80234, Jeddah, 21589 Saudi Arabia ,Earth Observation Center, Institute of Climate Change, University Kebangsaan Malaysia, 43600 UKM Bangi, Selangor Malaysia
| | - Ayan Mondal
- Ecology and Environmental Modelling Laboratory, Department of Environmental Science, The University of Burdwan, Burdwan, West Bengal India
| | - Phuong Thao Thi Ngo
- Institute of Research and Development, Duy Tan University, Da Nang, 550000 Vietnam
| | - Indrajit Chowdhuri
- Department of Geography, The University of Burdwan, Bardhaman, West Bengal India
| | - Ali P. Yunus
- Centre for Climate Change Adaptation, National Institute for Environmental Studies, Ibaraki, 305-8506 Japan
| | - Mehebub Sahana
- School of Environment, Education and Development, University of Manchester, Oxford Road, Manchester, M13 9PL UK
| | - Sadhan Malik
- Department of Geography, The University of Burdwan, Bardhaman, West Bengal India
| | - Biswajit Das
- Department of Geography, The University of Burdwan, Bardhaman, West Bengal India
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23
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Saleem K, Saleem M, Ahmad RZ, Javed AR, Alazab M, Gadekallu TR, Suleman A. Situation-Aware BDI Reasoning to Detect Early Symptoms of Covid 19 Using Smartwatch. IEEE SENSORS JOURNAL 2023; 23:898-905. [PMID: 36913222 PMCID: PMC9983688 DOI: 10.1109/jsen.2022.3156819] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Accepted: 02/28/2022] [Indexed: 05/09/2023]
Abstract
Ambient intelligence plays a crucial role in healthcare situations. It provides a certain way to deal with emergencies to provide the essential resources such as nearest hospitals and emergency stations promptly to avoid deaths. Since the outbreak of Covid-19, several artificial intelligence techniques have been used. However, situation awareness is a key aspect to handling any pandemic situation. The situation-awareness approach gives patients a routine life where they are continuously monitored by caregivers through wearable sensors and alert the practitioners in case of any patient emergency. Therefore, in this paper, we propose a situation-aware mechanism to detect Covid-19 systems early and alert the user to be self-aware regarding the situation to take precautions if the situation seems unlikely to be normal. We provide Belief-Desire-Intention intelligent reasoning mechanism for the system to analyze the situation after acquiring the data from the wearable sensors and alert the user according to their environment. We use the case study for further demonstration of our proposed framework. We model the proposed system by temporal logic and map the system illustration into a simulation tool called NetLogo to determine the results of the proposed system.
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Affiliation(s)
- Kiran Saleem
- School of SoftwareDalian University of TechnologyDalian116024China
| | - Misbah Saleem
- Institute of Diet and Nutritional Science, University of LahoreLahore54590Pakistan
| | | | | | - Mamoun Alazab
- College of EngineeringIT and Environment, Charles Darwin UniversityDarwinNT0815Australia
| | | | - Ahmad Suleman
- Center of Excellence in Solid State PhysicsUniversity of PunjabLahore05422Pakistan
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24
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Classification of Pulmonary Damage Stages Caused by COVID-19 Disease from CT Scans via Transfer Learning. BIOENGINEERING (BASEL, SWITZERLAND) 2022; 10:bioengineering10010006. [PMID: 36671578 PMCID: PMC9854698 DOI: 10.3390/bioengineering10010006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 12/12/2022] [Accepted: 12/15/2022] [Indexed: 12/24/2022]
Abstract
The COVID-19 pandemic has produced social and economic changes that are still affecting our lives. The coronavirus is proinflammatory, it is replicating, and it is quickly spreading. The most affected organ is the lung, and the evolution of the disease can degenerate very rapidly from the early phase, also known as mild to moderate and even severe stages, where the percentage of recovered patients is very low. Therefore, a fast and automatic method to detect the disease stages for patients who underwent a computer tomography investigation can improve the clinical protocol. Transfer learning is used do tackle this issue, mainly by decreasing the computational time. The dataset is composed of images from public databases from 118 patients and new data from 55 patients collected during the COVID-19 spread in Romania in the spring of 2020. Even if the disease detection by the computerized tomography scans was studied using deep learning algorithms, to our knowledge, there are no studies related to the multiclass classification of the images into pulmonary damage stages. This could be helpful for physicians to automatically establish the disease severity and decide on the proper treatment for patients and any special surveillance, if needed. An evaluation study was completed by considering six different pre-trained CNNs. The results are encouraging, assuring an accuracy of around 87%. The clinical impact is still huge, even if the disease spread and severity are currently diminished.
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25
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Sethi Y, Patel N, Kaka N, Desai A, Kaiwan O, Sheth M, Sharma R, Huang H, Chopra H, Khandaker MU, Lashin MMA, Hamd ZY, Emran TB. Artificial Intelligence in Pediatric Cardiology: A Scoping Review. J Clin Med 2022; 11:7072. [PMID: 36498651 PMCID: PMC9738645 DOI: 10.3390/jcm11237072] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2022] [Revised: 11/22/2022] [Accepted: 11/26/2022] [Indexed: 12/05/2022] Open
Abstract
The evolution of AI and data science has aided in mechanizing several aspects of medical care requiring critical thinking: diagnosis, risk stratification, and management, thus mitigating the burden of physicians and reducing the likelihood of human error. AI modalities have expanded feet to the specialty of pediatric cardiology as well. We conducted a scoping review searching the Scopus, Embase, and PubMed databases covering the recent literature between 2002-2022. We found that the use of neural networks and machine learning has significantly improved the diagnostic value of cardiac magnetic resonance imaging, echocardiograms, computer tomography scans, and electrocardiographs, thus augmenting the clinicians' diagnostic accuracy of pediatric heart diseases. The use of AI-based prediction algorithms in pediatric cardiac surgeries improves postoperative outcomes and prognosis to a great extent. Risk stratification and the prediction of treatment outcomes are feasible using the key clinical findings of each CHD with appropriate computational algorithms. Notably, AI can revolutionize prenatal prediction as well as the diagnosis of CHD using the EMR (electronic medical records) data on maternal risk factors. The use of AI in the diagnostics, risk stratification, and management of CHD in the near future is a promising possibility with current advancements in machine learning and neural networks. However, the challenges posed by the dearth of appropriate algorithms and their nascent nature, limited physician training, fear of over-mechanization, and apprehension of missing the 'human touch' limit the acceptability. Still, AI proposes to aid the clinician tomorrow with precision cardiology, paving a way for extremely efficient human-error-free health care.
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Affiliation(s)
- Yashendra Sethi
- PearResearch, Dehradun 248001, India
- Department of Medicine, Government Doon Medical College, Dehradun 248001, India
| | - Neil Patel
- PearResearch, Dehradun 248001, India
- Department of Medicine, GMERS Medical College, Himmatnagar 383001, India
| | - Nirja Kaka
- PearResearch, Dehradun 248001, India
- Department of Medicine, GMERS Medical College, Himmatnagar 383001, India
| | - Ami Desai
- Department of Medicine, SMIMER Medical College, Surat 395010, India
| | - Oroshay Kaiwan
- PearResearch, Dehradun 248001, India
- Department of Medicine, Northeast Ohio Medical University, Rootstown, OH 44272, USA
| | - Mili Sheth
- Department of Medicine, GMERS Gandhinagar, Gandhinagar 382012, India
| | - Rupal Sharma
- Department of Medicine, Government Medical College, Nagpur 440003, India
| | - Helen Huang
- Faculty of Medicine and Health Science, Royal College of Surgeons in Ireland, D02 YN77 Dublin, Ireland
| | - Hitesh Chopra
- Chitkara College of Pharmacy, Chitkara University, Rajpura 140401, India
| | - Mayeen Uddin Khandaker
- Centre for Applied Physics and Radiation Technologies, School of Engineering and Technology, Sunway University, Bandar Sunway 47500, Malaysia
| | - Maha M. A. Lashin
- Department of Biomedical Engineering, College of Engineering, Princess Nourah bint Abdulrahman University, P.O. 84428, Riyadh 11671, Saudi Arabia
| | - Zuhal Y. Hamd
- Department of Radiological Sciences, College of Health and Rehabilitation Sciences, Princess Nourah bint Abdulrahman University, P.O. 84428, Riyadh 11671, Saudi Arabia
| | - Talha Bin Emran
- Department of Pharmacy, BGC Trust University Bangladesh, Chittagong 4381, Bangladesh
- Department of Pharmacy, Faculty of Allied Health Sciences, Daffodil International University, Dhaka 1207, Bangladesh
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Dey S, Bhattacharya R, Malakar S, Schwenker F, Sarkar R. CovidConvLSTM: A fuzzy ensemble model for COVID-19 detection from chest X-rays. EXPERT SYSTEMS WITH APPLICATIONS 2022; 206:117812. [PMID: 35754941 PMCID: PMC9212804 DOI: 10.1016/j.eswa.2022.117812] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Revised: 06/05/2022] [Accepted: 06/06/2022] [Indexed: 05/17/2023]
Abstract
The rapid outbreak of COVID-19 has affected the lives and livelihoods of a large part of the society. Hence, to confine the rapid spread of this virus, early detection of COVID-19 is extremely important. One of the most common ways of detecting COVID-19 is by using chest X-ray images. In the literature, it is found that most of the research activities applied convolutional neural network (CNN) models where the features generated by the last convolutional layer were directly passed to the classification models. In this paper, convolutional long short-term memory (ConvLSTM) layer is used in order to encode the spatial dependency among the feature maps obtained from the last convolutional layer of the CNN and to improve the image representational capability of the model. Additionally, the squeeze-and-excitation (SE) block, a spatial attention mechanism, is used to allocate weights to important local features. These two mechanisms are employed on three popular CNN models - VGG19, InceptionV3, and MobileNet to improve their classification strength. Finally, the Sugeno fuzzy integral based ensemble method is used on these classifiers' outputs to enhance the detection accuracy further. For experiments, three chest X-ray datasets, which are very prevalent for COVID-19 detection, are considered. For all the three datasets, it is found that the results obtained by the proposed method are comparable to state-of-the-art methods. The code, along with the pre-trained models, can be found at https://github.com/colabpro123/CovidConvLSTM.
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Affiliation(s)
- Subhrajit Dey
- Department of Electrical Engineering, Jadavpur University, Kolkata, India
| | - Rajdeep Bhattacharya
- Department of Computer Science and Engineering, Jadavpur University, Kolkata, India
| | - Samir Malakar
- Department of Computer Science, Asutosh College, Kolkata, India
| | | | - Ram Sarkar
- Department of Computer Science and Engineering, Jadavpur University, Kolkata, India
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Tiwari RS, D L, Das TK, Srinivasan K, Chang CY. Conceptualising a channel-based overlapping CNN tower architecture for COVID-19 identification from CT-scan images. Sci Rep 2022; 12:18197. [PMID: 36307444 PMCID: PMC9616419 DOI: 10.1038/s41598-022-21700-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Accepted: 09/30/2022] [Indexed: 12/31/2022] Open
Abstract
Convolutional Neural Network (CNN) has been employed in classifying the COVID cases from the lungs' CT-Scan with promising quantifying metrics. However, SARS COVID-19 has been mutated, and we have many versions of the virus B.1.1.7, B.1.135, and P.1, hence there is a need for a more robust architecture that will classify the COVID positive patients from COVID negative patients with less training. We have developed a neural network based on the number of channels present in the images. The CNN architecture is developed in accordance with the number of the channels present in the dataset and are extracting the features separately from the channels present in the CT-Scan dataset. In the tower architecture, the first tower is dedicated for only the first channel present in the image; the second CNN tower is dedicated to the first and second channel feature maps, and finally the third channel takes account of all the feature maps from all three channels. We have used two datasets viz. one from Tongji Hospital, Wuhan, China and another SARS-CoV-2 dataset to train and evaluate our CNN architecture. The proposed model brought about an average accuracy of 99.4%, F1 score 0.988, and AUC 0.99.
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Affiliation(s)
| | - Lakshmi D
- School of Computing Science and Engineering, VIT Bhopal University, Bhopal, India
| | - Tapan Kumar Das
- School of Information Technology and Engineering, Vellore Institute of Technology, Vellore, India
| | - Kathiravan Srinivasan
- School of Computer Science and Engineering, Vellore Institute of Technology, Vellore, India
| | - Chuan-Yu Chang
- Department of Computer Science and Information Engineering, National Yunlin University of Science and Technology, Yunlin, 64002, Douliu City, Taiwan.
- Service Systems Technology Center, Industrial Technology Research Institute, Hsinchu, Taiwan.
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28
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Li F, Zhang X, Comellas AP, Hoffman EA, Yang T, Lin CL. Contrastive learning and subtyping of post-COVID-19 lung computed tomography images. Front Physiol 2022; 13:999263. [PMID: 36304574 PMCID: PMC9593072 DOI: 10.3389/fphys.2022.999263] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Accepted: 09/27/2022] [Indexed: 11/30/2022] Open
Abstract
Patients who recovered from the novel coronavirus disease 2019 (COVID-19) may experience a range of long-term symptoms. Since the lung is the most common site of the infection, pulmonary sequelae may present persistently in COVID-19 survivors. To better understand the symptoms associated with impaired lung function in patients with post-COVID-19, we aimed to build a deep learning model which conducts two tasks: to differentiate post-COVID-19 from healthy subjects and to identify post-COVID-19 subtypes, based on the latent representations of lung computed tomography (CT) scans. CT scans of 140 post-COVID-19 subjects and 105 healthy controls were analyzed. A novel contrastive learning model was developed by introducing a lung volume transform to learn latent features of disease phenotypes from CT scans at inspiration and expiration of the same subjects. The model achieved 90% accuracy for the differentiation of the post-COVID-19 subjects from the healthy controls. Two clusters (C1 and C2) with distinct characteristics were identified among the post-COVID-19 subjects. C1 exhibited increased air-trapping caused by small airways disease (4.10%, p = 0.008) and diffusing capacity for carbon monoxide %predicted (DLCO %predicted, 101.95%, p < 0.001), while C2 had decreased lung volume (4.40L, p < 0.001) and increased ground glass opacity (GGO%, 15.85%, p < 0.001). The contrastive learning model is able to capture the latent features of two post-COVID-19 subtypes characterized by air-trapping due to small airways disease and airway-associated interstitial fibrotic-like patterns, respectively. The discovery of post-COVID-19 subtypes suggests the need for different managements and treatments of long-term sequelae of patients with post-COVID-19.
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Affiliation(s)
- Frank Li
- Roy J. Carver Department of Biomedical Engineering, University of Iowa, Iowa City, IA, United States
- IIHR-Hydroscience and Engineering, University of Iowa, Iowa City, IA, United States
| | - Xuan Zhang
- IIHR-Hydroscience and Engineering, University of Iowa, Iowa City, IA, United States
- Department of Mechanical Engineering, University of Iowa, Iowa City, IA, United States
| | | | - Eric A. Hoffman
- Roy J. Carver Department of Biomedical Engineering, University of Iowa, Iowa City, IA, United States
- Department of Radiology, University of Iowa, Iowa City, IA, United States
| | - Tianbao Yang
- Department of Computer Science, University of Iowa, Iowa City, IA, United States
| | - Ching-Long Lin
- Roy J. Carver Department of Biomedical Engineering, University of Iowa, Iowa City, IA, United States
- IIHR-Hydroscience and Engineering, University of Iowa, Iowa City, IA, United States
- Department of Mechanical Engineering, University of Iowa, Iowa City, IA, United States
- Department of Radiology, University of Iowa, Iowa City, IA, United States
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Karthik R, Menaka R, Hariharan M, Kathiresan GS. AI for COVID-19 Detection from Radiographs: Incisive Analysis of State of the Art Techniques, Key Challenges and Future Directions. Ing Rech Biomed 2022; 43:486-510. [PMID: 34336141 PMCID: PMC8312058 DOI: 10.1016/j.irbm.2021.07.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2021] [Revised: 06/14/2021] [Accepted: 07/19/2021] [Indexed: 12/24/2022]
Abstract
Background and objective In recent years, Artificial Intelligence has had an evident impact on the way research addresses challenges in different domains. It has proven to be a huge asset, especially in the medical field, allowing for time-efficient and reliable solutions. This research aims to spotlight the impact of deep learning and machine learning models in the detection of COVID-19 from medical images. This is achieved by conducting a review of the state-of-the-art approaches proposed by the recent works in this field. Methods The main focus of this study is the recent developments of classification and segmentation approaches to image-based COVID-19 detection. The study reviews 140 research papers published in different academic research databases. These papers have been screened and filtered based on specified criteria, to acquire insights prudent to image-based COVID-19 detection. Results The methods discussed in this review include different types of imaging modality, predominantly X-rays and CT scans. These modalities are used for classification and segmentation tasks as well. This review seeks to categorize and discuss the different deep learning and machine learning architectures employed for these tasks, based on the imaging modality utilized. It also hints at other possible deep learning and machine learning architectures that can be proposed for better results towards COVID-19 detection. Along with that, a detailed overview of the emerging trends and breakthroughs in Artificial Intelligence-based COVID-19 detection has been discussed as well. Conclusion This work concludes by stipulating the technical and non-technical challenges faced by researchers and illustrates the advantages of image-based COVID-19 detection with Artificial Intelligence techniques.
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Affiliation(s)
- R Karthik
- Centre for Cyber Physical Systems, Vellore Institute of Technology, Chennai, India
| | - R Menaka
- Centre for Cyber Physical Systems, Vellore Institute of Technology, Chennai, India
| | - M Hariharan
- School of Computing Sciences and Engineering, Vellore Institute of Technology, Chennai, India
| | - G S Kathiresan
- School of Electronics Engineering, Vellore Institute of Technology, Chennai, India
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Analysis on COVID-19 Infection Spread Rate during Relief Schemes Using Graph Theory and Deep Learning. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2022; 2022:8131193. [PMID: 35991144 PMCID: PMC9391156 DOI: 10.1155/2022/8131193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/25/2022] [Accepted: 07/28/2022] [Indexed: 12/04/2022]
Abstract
The novel coronavirus 2019 (COVID-19) disease is a pandemic which affects thousands of people throughout the world. It has rapidly spread throughout India since the first case in India was reported on 30 January 2020. The official report says that totally 4, 11,773 cases are positive, 2, 28,307 recovered, and the country reported 12,948 deaths as of 21 June 2020. Vaccination is the only way to prevent the spreading of COVID-19 disease. Due to various reasons, there is vaccine hesitancy across many people. Hence, the Indian government has the solution to avoid the spread of the disease by instructing their citizens to maintain social distancing, wearing masks, avoiding crowds, and cleaning your hands. Moreover, lots of poverty cases are reported due to social distancing, and hence, both the center government and the respective state governments decide to issue relief funds to all its citizens. The government is unable to maintain social distancing during the relief schemes as the population is huge and available support staffs are less. In this paper, the proposed algorithm makes use of graph theory to schedule the timing of the relief funds so that with the available support staff, the government would able to implement its relief scheme while maintaining social distancing. Furthermore, we have used LSTM deep learning model to predict the spread rate and analyze the daily positive COVID cases.
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Alshayeji MH, ChandraBhasi Sindhu S, Abed S. CAD systems for COVID-19 diagnosis and disease stage classification by segmentation of infected regions from CT images. BMC Bioinformatics 2022; 23:264. [PMID: 35794537 PMCID: PMC9261058 DOI: 10.1186/s12859-022-04818-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Accepted: 06/30/2022] [Indexed: 11/19/2022] Open
Abstract
Background Here propose a computer-aided diagnosis (CAD) system to differentiate COVID-19 (the coronavirus disease of 2019) patients from normal cases, as well as to perform infection region segmentation along with infection severity estimation using computed tomography (CT) images. The developed system facilitates timely administration of appropriate treatment by identifying the disease stage without reliance on medical professionals. So far, this developed model gives the most accurate, fully automatic COVID-19 real-time CAD framework. Results The CT image dataset of COVID-19 and non-COVID-19 individuals were subjected to conventional ML stages to perform binary classification. In the feature extraction stage, SIFT, SURF, ORB image descriptors and bag of features technique were implemented for the appropriate differentiation of chest CT regions affected with COVID-19 from normal cases. This is the first work introducing this concept for COVID-19 diagnosis application. The preferred diverse database and selected features that are invariant to scale, rotation, distortion, noise etc. make this framework real-time applicable. Also, this fully automatic approach which is faster compared to existing models helps to incorporate it into CAD systems. The severity score was measured based on the infected regions along the lung field. Infected regions were segmented through a three-class semantic segmentation of the lung CT image. Using severity score, the disease stages were classified as mild if the lesion area covers less than 25% of the lung area; moderate if 25–50% and severe if greater than 50%. Our proposed model resulted in classification accuracy of 99.7% with a PNN classifier, along with area under the curve (AUC) of 0.9988, 99.6% sensitivity, 99.9% specificity and a misclassification rate of 0.0027. The developed infected region segmentation model gave 99.47% global accuracy, 94.04% mean accuracy, 0.8968 mean IoU (intersection over union), 0.9899 weighted IoU, and a mean Boundary F1 (BF) contour matching score of 0.9453, using Deepabv3+ with its weights initialized using ResNet-50. Conclusions The developed CAD system model is able to perform fully automatic and accurate diagnosis of COVID-19 along with infected region extraction and disease stage identification. The ORB image descriptor with bag of features technique and PNN classifier achieved the superior classification performance.
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Affiliation(s)
- Mohammad H Alshayeji
- Computer Engineering Department, College of Engineering and Petroleum, Kuwait University, P.O. Box 5969, 13060, Safat, Kuwait City, Kuwait.
| | | | - Sa'ed Abed
- Computer Engineering Department, College of Engineering and Petroleum, Kuwait University, P.O. Box 5969, 13060, Safat, Kuwait City, Kuwait
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32
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David HBF, Suruliandi A, Raja SP. Predicting Corona Virus Affected Patients Using Supervised Machine Learning. INT J UNCERTAIN FUZZ 2022. [DOI: 10.1142/s0218488522400086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The world is infected from the deadliest pandemic disease humankind has ever seen. Several medical practitioners have been encountered with the corona virus and are constantly losing their lives in the fight. Hence, the main objective of this research work is to characterize the clinical features of the patients and construct a novel dataset for machine learning to classify them accurately prior to treatment. The positive patients can be identified on many characteristics and the principle data for this research is considered on the basis of the exploratory analysis done on the various risk factors that is also associated with the mortality in the hospitals. As an outcome, this article presents a supervised machine learning model incorporating the insights, symptoms and classification of the corona virus infected person. The proposed model and the dataset are tested against six well known classifiers on various levels of cross folding and percentage splits. The proposed dataset is also tested against the actual patient records and was found that the model accurately categorizes them prior to their treatment. The experimental results for proposed techniques showed higher performance and better accuracy further creating an impact on then identification of corona virus patients.
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Affiliation(s)
| | - A. Suruliandi
- Department of Computer Science and Engineering, Manonmaniam Sundaranar University, Tirunelveli, Tamil Nadhu, India
| | - S. P. Raja
- Department of Computer Science and Engineering, Vellore Institute of Technology, Vellore, Tamil Nadhu, India
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33
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Pavlova M, Terhljan N, Chung AG, Zhao A, Surana S, Aboutalebi H, Gunraj H, Sabri A, Alaref A, Wong A. COVID-Net CXR-2: An Enhanced Deep Convolutional Neural Network Design for Detection of COVID-19 Cases From Chest X-ray Images. Front Med (Lausanne) 2022; 9:861680. [PMID: 35755067 PMCID: PMC9226387 DOI: 10.3389/fmed.2022.861680] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2022] [Accepted: 05/12/2022] [Indexed: 01/08/2023] Open
Abstract
As the COVID-19 pandemic devastates globally, the use of chest X-ray (CXR) imaging as a complimentary screening strategy to RT-PCR testing continues to grow given its routine clinical use for respiratory complaint. As part of the COVID-Net open source initiative, we introduce COVID-Net CXR-2, an enhanced deep convolutional neural network design for COVID-19 detection from CXR images built using a greater quantity and diversity of patients than the original COVID-Net. We also introduce a new benchmark dataset composed of 19,203 CXR images from a multinational cohort of 16,656 patients from at least 51 countries, making it the largest, most diverse COVID-19 CXR dataset in open access form. The COVID-Net CXR-2 network achieves sensitivity and positive predictive value of 95.5 and 97.0%, respectively, and was audited in a transparent and responsible manner. Explainability-driven performance validation was used during auditing to gain deeper insights in its decision-making behavior and to ensure clinically relevant factors are leveraged for improving trust in its usage. Radiologist validation was also conducted, where select cases were reviewed and reported on by two board-certified radiologists with over 10 and 19 years of experience, respectively, and showed that the critical factors leveraged by COVID-Net CXR-2 are consistent with radiologist interpretations.
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Affiliation(s)
- Maya Pavlova
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON, Canada
| | - Naomi Terhljan
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON, Canada
| | - Audrey G. Chung
- Waterloo AI Institute, University of Waterloo, Waterloo, ON, Canada
- DarwinAI Corp., Waterloo, ON, Canada
| | - Andy Zhao
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON, Canada
| | - Siddharth Surana
- Cheriton School of Computer Science, University of Waterloo, Waterloo, ON, Canada
| | - Hossein Aboutalebi
- Waterloo AI Institute, University of Waterloo, Waterloo, ON, Canada
- Cheriton School of Computer Science, University of Waterloo, Waterloo, ON, Canada
| | - Hayden Gunraj
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON, Canada
| | - Ali Sabri
- Department of Radiology, McMaster University, Hamilton, ON, Canada
- Niagara Health System, St. Catharines, ON, Canada
| | - Amer Alaref
- Department of Diagnostic Imaging, Northern Ontario School of Medicine, Thunder Bay, ON, Canada
- Department of Diagnostic Radiology, Thunder Bay Regional Health Sciences Centre, Thunder Bay, ON, Canada
| | - Alexander Wong
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON, Canada
- Waterloo AI Institute, University of Waterloo, Waterloo, ON, Canada
- DarwinAI Corp., Waterloo, ON, Canada
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Bhattacharjee A, Vishwakarma GK, Gajare N, Singh N. Time Series Analysis Using Different Forecast Methods and Case Fatality Rate for Covid‐19 Pandemic. REGIONAL SCIENCE POLICY & PRACTICE 2022. [PMCID: PMC9347860 DOI: 10.1111/rsp3.12555] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
This study presents forecasting methods using time series analysis for confirmed cases, the number of deaths and recovery cases, and individual vaccination status in different states of India. It aims to forecast the confirmed cases and mortality rate and develop an artificial intelligence method and different statistical methodologies that can help predict the future of Covid‐19 cases. Various forecasting methods in time series analysis such as ARIMA, Holt's trend, naive, simple exponential smoothing, TBATS, and MAPE are extended for the study. It also involved the case fatality rate for the number of deaths and confirmed cases for respective states in India. This study includes the forecast values for the number of positive cases, cured patients, mortality rate, and case fatality rate for Covid‐19 cases. Among all forecast methods involved in this study, the naive and simple exponential smoothing method shows an increased number of positive instances and cured patients.
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Affiliation(s)
- Atanu Bhattacharjee
- Section of Biostatistics, Centre for Cancer Epidemiology Tata Memorial Center Navi Mumbai India
- Homi Bhabha National Institute Mumbai India
| | | | - Namrata Gajare
- Section of Biostatistics, Centre for Cancer Epidemiology Tata Memorial Center Navi Mumbai India
| | - Neha Singh
- Department of Mathematics & Computing Indian Institute of Technology Dhanbad Dhanbad India
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35
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Abuhasel KA, Khadr M, Alquraish MM. Analyzing and forecasting COVID-19 pandemic in the Kingdom of Saudi Arabia using ARIMA and SIR models. Comput Intell 2022; 38:770-783. [PMID: 33230367 PMCID: PMC7675248 DOI: 10.1111/coin.12407] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 07/23/2020] [Accepted: 09/06/2020] [Indexed: 01/30/2023]
Abstract
The novel coronavirus COVID-19 is spreading all across the globe. By June 29, 2020, the World Health Organization announced that the number of cases worldwide had reached 9 994 206 and resulted in more than 499 024 deaths. The earliest case of COVID-19 in the Kingdom of Saudi Arabia (KSA) was registered on March 2 in 2020. Since then, the number of infections as per the outcome of the tests increased gradually on a daily basis. The KSA has 182 493 cases, with 124 755 recoveries and 1551 deaths on June 29, 2020. There have been significant efforts to develop models that forecast the risks, parameters, and impacts of this epidemic. These models can aid in controlling and preventing the outbreak of these infections. In this regard, this article details the extent to which the infection cases, prevalence, and recovery rate of this pandemic are in the country and the predictions that can be made using the past and current data. The well-known classical SIR model was applied to predict the highest number of cases that may be realized and the flattening of the curve afterward. On the other hand, the ARIMA model was used to predict the prevalence cases. Results of the SIR model indicate that the repatriation plan reduced the estimated reproduction number. The results further affirm that the containment technique used by Saudi Arabia to curb the spread of the disease was efficient. Moreover, using the results, close interaction between people, despite the current measures remains a great risk factor to the spread of the disease. This may force the government to take even more stringent measures. By validating the performance of the applied models, ARIMA proved to be a good forecasting method from current data. The past data and the forecasted data, as per the ARIMA model provided high correlation, showing that there were minimum errors.
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Affiliation(s)
- Khaled Ali Abuhasel
- Department of Mechanical Engineering, College of EngineeringUniversity of BishaBishaKingdom of Saudi Arabia
| | - Mosaad Khadr
- Department of Civil Engineering, College of EngineeringUniversity of BishaBishaKingdom of Saudi Arabia
- Department of Irrigation and Hydraulic Engineering, Faculty of EngineeringTanta UniversityTanatEgypt
| | - Mohammed M. Alquraish
- Department of Mechanical Engineering, College of EngineeringUniversity of BishaBishaKingdom of Saudi Arabia
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36
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Recent Trends in AI-Based Intelligent Sensing. ELECTRONICS 2022. [DOI: 10.3390/electronics11101661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
In recent years, intelligent sensing has gained significant attention because of its autonomous decision-making ability to solve complex problems. Today, smart sensors complement and enhance the capabilities of human beings and have been widely embraced in numerous application areas. Artificial intelligence (AI) has made astounding growth in domains of natural language processing, machine learning (ML), and computer vision. The methods based on AI enable a computer to learn and monitor activities by sensing the source of information in a real-time environment. The combination of these two technologies provides a promising solution in intelligent sensing. This survey provides a comprehensive summary of recent research on AI-based algorithms for intelligent sensing. This work also presents a comparative analysis of algorithms, models, influential parameters, available datasets, applications and projects in the area of intelligent sensing. Furthermore, we present a taxonomy of AI models along with the cutting edge approaches. Finally, we highlight challenges and open issues, followed by the future research directions pertaining to this exciting and fast-moving field.
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Deep features to detect pulmonary abnormalities in chest X-rays due to infectious diseaseX: Covid-19, pneumonia, and tuberculosis. Inf Sci (N Y) 2022; 592:389-401. [DOI: 10.1016/j.ins.2022.01.062] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Revised: 01/28/2022] [Accepted: 01/30/2022] [Indexed: 12/12/2022]
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Santosh KC, Ghosh S, GhoshRoy D. Deep Learning for Covid-19 Screening Using Chest X-Rays in 2020: A Systematic Review. INT J PATTERN RECOGN 2022. [DOI: 10.1142/s0218001422520103] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Artificial Intelligence (AI) has promoted countless contributions in the field of healthcare and medical imaging. In this paper, we thoroughly analyze peer-reviewed research findings/articles on AI-guided tools for Covid-19 analysis/screening using chest X-ray images in the year 2020. We discuss on how far deep learning algorithms help in decision-making. We identify/address data collections, methodical contributions, promising methods, and challenges. However, a fair comparison is not trivial as dataset sizes vary over time, throughout the year 2020. Even though their unprecedented efforts in building AI-guided tools to detect, localize, and segment Covid-19 cases are limited to education and training, we elaborate on their strengths and possible weaknesses when we consider the need of cross-population train/test models. In total, with search keywords: (Covid-19 OR Coronavirus) AND chest x-ray AND deep learning AND artificial intelligence AND medical imaging in both PubMed Central Repository and Web of Science, we systematically reviewed 58 research articles and performed meta-analysis.
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Affiliation(s)
- KC Santosh
- 2AI: Applied Artificial Intelligence Research Lab – Computer Science, University of South Dakota, Vermillion, SD 57069, USA
| | - Supriti Ghosh
- 2AI: Applied Artificial Intelligence Research Lab – Computer Science, University of South Dakota, Vermillion, SD 57069, USA
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39
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Ilbeigipour S, Albadvi A. Symptom-based analysis of COVID-19 cases using supervised machine learning approaches to improve medical decision-making. INFORMATICS IN MEDICINE UNLOCKED 2022; 30:100933. [PMID: 35434262 PMCID: PMC9004256 DOI: 10.1016/j.imu.2022.100933] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Revised: 03/26/2022] [Accepted: 03/26/2022] [Indexed: 12/13/2022] Open
Abstract
The world today faces a new challenge that is unprecedented in the last 100 years. The emergence of a new coronavirus has led to a human catastrophe. Scientists in various sciences have been looking for solutions to this problem so far. In addition to general vaccination, maintaining social distance and adherence to government guidelines on safety precaution measures are the most well-known strategies to prevent COVID-19 infection. In this research, we tried to examine the symptoms of COVID-19 cases through different supervised machine learning methods. We solved the class imbalance problem using the synthetic minority over-sampling (SMOTE) method and then developed some classification models to predict the outcome of COVID-19 cases (recovery or death). Besides, we implemented a rule-based technique to identify different combinations of variables with specific ranges of their values that together affect disease severity. Our results showed that the random forest model with 95.6% accuracy, 97.1% sensitivity, 94.0% specification, 94.4% precision, 95.8% F-score, and 99.3% AUC-score outperforms state-of-the-art classification models. Finally, we identified the most significant rules that state various combinations of 6 features in certain ranges of their values lead to patients’ recovery with a confidence value of 90%. In conclusion, the classification results in this study show better performance than recent studies, and the extracted rules help physicians consider other important factors to improve health services and medical decision-making for different groups of COVID-19 patients.
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Affiliation(s)
- Sadegh Ilbeigipour
- Department of Information Technology Engineering, Industrial and Systems Engineering Faculty, Tarbiat Modares University, Tehran, Iran
| | - Amir Albadvi
- Department of Information Technology Engineering, Industrial and Systems Engineering Faculty, Tarbiat Modares University, Tehran, Iran
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Identifying Country-Level Risk Factors for the Spread of COVID-19 in Europe Using Machine Learning. Viruses 2022; 14:v14030625. [PMID: 35337032 PMCID: PMC8955542 DOI: 10.3390/v14030625] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 03/06/2022] [Accepted: 03/14/2022] [Indexed: 01/27/2023] Open
Abstract
Coronavirus disease 2019 (COVID-19) has resulted in approximately 5 million deaths around the world with unprecedented consequences in people’s daily routines and in the global economy. Despite vast increases in time and money spent on COVID-19-related research, there is still limited information about the factors at the country level that affected COVID-19 transmission and fatality in EU. The paper focuses on the identification of these risk factors using a machine learning (ML) predictive pipeline and an associated explainability analysis. To achieve this, a hybrid dataset was created employing publicly available sources comprising heterogeneous parameters from the majority of EU countries, e.g., mobility measures, policy responses, vaccinations, and demographics/generic country-level parameters. Data pre-processing and data exploration techniques were initially applied to normalize the available data and decrease the feature dimensionality of the data problem considered. Then, a linear ε-Support Vector Machine (ε-SVM) model was employed to implement the regression task of predicting the number of deaths for each one of the three first pandemic waves (with mean square error of 0.027 for wave 1 and less than 0.02 for waves 2 and 3). Post hoc explainability analysis was finally applied to uncover the rationale behind the decision-making mechanisms of the ML pipeline and thus enhance our understanding with respect to the contribution of the selected country-level parameters to the prediction of COVID-19 deaths in EU.
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Churiso G, Diriba K, Girma H, Tafere S. Clinical Features and Time to Recovery of Admitted COVID-19 Cases at Dilla University Referral Hospital Treatment Center, South Ethiopia. Infect Drug Resist 2022; 15:795-806. [PMID: 35281575 PMCID: PMC8904438 DOI: 10.2147/idr.s356606] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2022] [Accepted: 02/15/2022] [Indexed: 12/23/2022] Open
Abstract
Background Since coronavirus disease 2019 emergence, millions were infected and many were dying because of the virus. Clinical features and time to recovery of admitted clients vary across settings. Therefore showing clinical features and recovery time from COVID-19 in a different setting is necessary to design appropriate treatment and preventive measures. So, this study attempted to investigate the clinical features and time to recovery of admitted clients to Dilla University Referral Hospital treatment center, Ethiopia. Methods A retrospective study design was conducted in 220 patients confirmed by real time polymerase chain reaction and admitted to Dilla University Referral Hospital treatment center from September 2020 to July 2021. Data were collected from the patients' record. Data entry was done by an Epi-Info version 7.2.1.0 and analyzed by Statistical Package for the Social Sciences version 25 software. Descriptive statistics were used for clinical features, and median time to recovery was computed by using Kaplan-Meier. Results Common clinical features were cough 209 (95%), shortness of breath 153 (69.5%), fever 133 (60.5%), headache 75 (34.1%), easy fatigue 68 (30.9%), joint pain 56 (25.5%), tachypnea 197 (89.5%), hypoxia 95 (43.2%), and tachycardia 83 (37.7%). The overall median recovery time for admitted cases was 5 days. There was significant difference between recovery probability of severe and moderate cases, severe and mild cases (p=0.00), who had normal body temperature and hypothermic (p=0.05), who had normal breathing rate and bradypnea patients (p= 0.014). Conclusion COVID-19 patients frequently show cough, shortness of breath, fever, headache, easy fatigue and joint pain. Median time to recovery was 5 days. Having a normal body temperature, normal breathing rate, and severe disease status had statistically significant association with median recovery time. So, close follow up is required for client admitted with severe disease.
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Affiliation(s)
- Gemechu Churiso
- Department of Medical Laboratory Sciences, Dilla University, Dilla, Ethiopia
| | - Kuma Diriba
- Department of Medical Laboratory Sciences, Dilla University, Dilla, Ethiopia
| | - Henok Girma
- Ohio State University, Global One Health Initiative, Dilla, Ethiopia
| | - Soressa Tafere
- COVID-19 Treatment Center, Dilla University, Dilla, Ethiopia
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Huang C, Wang M, Rafaqat W, Shabbir S, Lian L, Zhang J, Lo S, Song W. Data-driven test strategy for COVID-19 using machine learning: A study in Lahore, Pakistan. SOCIO-ECONOMIC PLANNING SCIENCES 2022; 80:101091. [PMID: 34121777 PMCID: PMC8184360 DOI: 10.1016/j.seps.2021.101091] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2020] [Revised: 03/03/2021] [Accepted: 05/25/2021] [Indexed: 06/02/2023]
Abstract
AIMS We aimed at giving a preliminary analysis of the weakness of a current test strategy, and proposing a data-driven strategy that was self-adaptive to the dynamic change of pandemic. The effect of driven-data selection over time and space was also within the deep concern. METHODS A mathematical definition of the test strategy were given. With the real COVID-19 test data from March to July collected in Lahore, a significance analysis of the possible features was conducted. A machine learning method based on logistic regression and priority ranking were proposed for the data-driven test strategy. With performance assessed by the area under the receiver operating characteristic curve (AUC), time series analysis and spatial cross-test were conducted. RESULTS The transition of risk factors accounted for the failure of the current test strategy. The proposed data-driven strategy could enhance the positive detection rate from 2.54% to 28.18%, and the recall rate from 8.05% to 89.35% under strictly limited test capacity. Much more optimal utilization of test resources could be realized where 89.35% of total positive cases could be detected with merely 48.17% of the original test amount. The strategy showed self-adaptability with the development of pandemic, while the strategy driven by local data was proved to be optimal. CONCLUSIONS We recommended a generalization of such a data-driven test strategy for a better response to the global developing pandemic. Besides, the construction of the COVID-19 data system should be more refined on space for local applications.
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Affiliation(s)
- Chuanli Huang
- State Key Laboratory of Fire Science, University of Science and Technology of China, Hefei, 230027, PR China
- Department of Architectural and Civil Engineering, City University of Hong Kong, Hong Kong, China
| | - Min Wang
- Department of Oncology, The Second Affiliated Hospital of Soochow University, Suzhou, 215004, China
| | - Warda Rafaqat
- State Key Laboratory of Fire Science, University of Science and Technology of China, Hefei, 230027, PR China
| | - Salman Shabbir
- Program Officer, Punjab Information Technology Board, Arfa Kareem Tower, Ferozpur Road, Lahore, Pakistan
| | - Liping Lian
- School of Urban Planning and Design, Shenzhen Graduate School, Peking University, No. 2199, Lishui Road, Nanshan District, Shenzhen, 518055, China
| | - Jun Zhang
- State Key Laboratory of Fire Science, University of Science and Technology of China, Hefei, 230027, PR China
| | - Siuming Lo
- Department of Architectural and Civil Engineering, City University of Hong Kong, Hong Kong, China
| | - Weiguo Song
- State Key Laboratory of Fire Science, University of Science and Technology of China, Hefei, 230027, PR China
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Abstract
Deep learning uses artificial neural networks to recognize patterns and learn from them to make decisions. Deep learning is a type of machine learning that uses artificial neural networks to mimic the human brain. It uses machine learning methods such as supervised, semi-supervised, or unsupervised learning strategies to learn automatically in deep architectures and has gained much popularity due to its superior ability to learn from huge amounts of data. It was found that deep learning approaches can be used for big data analysis successfully. Applications include virtual assistants such as Alexa and Siri, facial recognition, personalization, natural language processing, autonomous cars, automatic handwriting generation, news aggregation, the colorization of black and white images, the addition of sound to silent films, pixel restoration, and deep dreaming. As a review, this paper aims to categorically cover several widely used deep learning algorithms along with their architectures and their practical applications: backpropagation, autoencoders, variational autoencoders, restricted Boltzmann machines, deep belief networks, convolutional neural networks, recurrent neural networks, generative adversarial networks, capsnets, transformer, embeddings from language models, bidirectional encoder representations from transformers, and attention in natural language processing. In addition, challenges of deep learning are also presented in this paper, such as AutoML-Zero, neural architecture search, evolutionary deep learning, and others. The pros and cons of these algorithms and their applications in healthcare are explored, alongside the future direction of this domain. This paper presents a review and a checkpoint to systemize the popular algorithms and to encourage further innovation regarding their applications. For new researchers in the field of deep learning, this review can help them to obtain many details about the advantages, disadvantages, applications, and working mechanisms of a number of deep learning algorithms. In addition, we introduce detailed information on how to apply several deep learning algorithms in healthcare, such as in relation to the COVID-19 pandemic. By presenting many challenges of deep learning in one section, we hope to increase awareness of these challenges, and how they can be dealt with. This could also motivate researchers to find solutions for these challenges.
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El-Hasnony IM, Elzeki OM, Alshehri A, Salem H. Multi-Label Active Learning-Based Machine Learning Model for Heart Disease Prediction. SENSORS (BASEL, SWITZERLAND) 2022; 22:1184. [PMID: 35161928 PMCID: PMC8839067 DOI: 10.3390/s22031184] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Revised: 01/28/2022] [Accepted: 01/31/2022] [Indexed: 12/02/2022]
Abstract
The rapid growth and adaptation of medical information to identify significant health trends and help with timely preventive care have been recent hallmarks of the modern healthcare data system. Heart disease is the deadliest condition in the developed world. Cardiovascular disease and its complications, including dementia, can be averted with early detection. Further research in this area is needed to prevent strokes and heart attacks. An optimal machine learning model can help achieve this goal with a wealth of healthcare data on heart disease. Heart disease can be predicted and diagnosed using machine-learning-based systems. Active learning (AL) methods improve classification quality by incorporating user-expert feedback with sparsely labelled data. In this paper, five (MMC, Random, Adaptive, QUIRE, and AUDI) selection strategies for multi-label active learning were applied and used for reducing labelling costs by iteratively selecting the most relevant data to query their labels. The selection methods with a label ranking classifier have hyperparameters optimized by a grid search to implement predictive modelling in each scenario for the heart disease dataset. Experimental evaluation includes accuracy and F-score with/without hyperparameter optimization. Results show that the generalization of the learning model beyond the existing data for the optimized label ranking model uses the selection method versus others due to accuracy. However, the selection method was highlighted in regards to the F-score using optimized settings.
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Affiliation(s)
- Ibrahim M. El-Hasnony
- Faculty of Computers and Information Sciences, Mansoura University, Mansoura 35516, Egypt;
| | - Omar M. Elzeki
- Faculty of Computers and Information Sciences, Mansoura University, Mansoura 35516, Egypt;
- Faculty of Computer Science, New Mansoura University, Gamasa 35712, Egypt
| | - Ali Alshehri
- Department of Computer Science, University of Tabuk, Tabuk 71491, Saudi Arabia;
| | - Hanaa Salem
- Faculty of Engineering, Delta University for Science and Technology, Gamasa 35712, Egypt;
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Equbal A, Masood S, Equbal I, Ahmad S, Khan NZ, Khan ZA. Artificial Intelligence against COVID-19 Pandemic: A Comprehensive Insight. Curr Med Imaging 2022; 19:1-18. [PMID: 34607548 DOI: 10.2174/1573405617666211004115208] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Revised: 08/11/2021] [Accepted: 08/30/2021] [Indexed: 11/22/2022]
Abstract
COVID-19 is a pandemic initially identified in Wuhan, China, which is caused by a novel coronavirus, also recognized as the Severe Acute Respiratory Syndrome (SARS-nCoV-2). Unlike other coronaviruses, this novel pathogen may cause unusual contagious pain, which results in viral pneumonia, serious heart problems, and even death. Researchers worldwide are continuously striving to develop a cure for this highly infectious disease, yet there are no well-defined absolute treatments available at present. Several vaccination drives using emergency use authorisation vaccines have been held across many countries; however, their long-term efficacy and side-effects studies are yet to be studied. Various analytical and statistical models have been developed, however, their outcome rate is prolonged. Thus, modern science stresses the application of state-of-the-art methods to combat COVID-19. This paper aims to provide a deep insight into the comprehensive literature about AI and AI-driven tools in the battle against the COVID-19 pandemic. The high efficacy of these AI systems can be observed in terms of highly accurate results, i.e., > 95%, as reported in various studies. The extensive literature reviewed in this paper is divided into five sections, each describing the application of AI against COVID-19 viz. COVID-19 prevention, diagnostic, infection spread trend prediction, therapeutic and drug repurposing. The application of Artificial Intelligence (AI) and AI-driven tools are proving to be useful in managing and fighting against the COVID-19 pandemic, especially by analysing the X-Ray and CT-Scan imaging data of infected subjects, infection trend predictions, etc.
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Affiliation(s)
- Azhar Equbal
- Department of Mechanical Engineering, Jamia Millia Islamia, New Delhi, India
| | - Sarfaraz Masood
- Department of Computer Engineering, Jamia Millia Islamia, New Delhi, India
| | - Iftekhar Equbal
- Department of Rural Management, Xavier Institute of Social Service, Jharkhand, India
| | - Shafi Ahmad
- Department of Mechanical Engineering, Jamia Millia Islamia, New Delhi, India
| | - Noor Zaman Khan
- National Institute of Technology Srinagar, Hazratbal, Srinagar, Jammu, and Kashmir, India
| | - Zahid A Khan
- Department of Mechanical Engineering, Jamia Millia Islamia, New Delhi, India
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Li G, Chen K, Yang H. A new hybrid prediction model of cumulative COVID-19 confirmed data. PROCESS SAFETY AND ENVIRONMENTAL PROTECTION : TRANSACTIONS OF THE INSTITUTION OF CHEMICAL ENGINEERS, PART B 2022; 157:1-19. [PMID: 34744323 PMCID: PMC8560186 DOI: 10.1016/j.psep.2021.10.047] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2021] [Revised: 10/25/2021] [Accepted: 10/27/2021] [Indexed: 05/04/2023]
Abstract
Establishing an accurate and efficient prediction model is of great significance for governments and other social organizations to formulate prevention and control policies and curb the explosive spread of the pandemic. To improve prediction accuracy of cumulative COVID-19 confirmed data, a new hybrid prediction model based on gradient-based optimizer variational mode decomposition (GVMD), extreme learning machine (ELM), and autoregressive integrated moving average (ARIMA), named GVMD-ELM-ARIMA, is proposed. To solve the problem of selecting the k value and the penalty factor α in variational mode decomposition (VMD), this paper proposes gradient-based optimizer variational mode decomposition (GVMD), which realizes the self-adaptive determination of k value and α value. Firstly, GVMD decomposes the cumulative COVID-19 confirmed data into some intrinsic mode functions (IMFs) and a residual component (IMFr). Secondly, IMFs are predicted by ELM. Then, IMFr is predicted by ARIMA. Finally, the final prediction results are obtained by reconstructing the prediction result of IMFs and IMFr. The cumulative COVID-19 confirmed data of the United States, India and Russia is used to verify its effectiveness. Taking the United States as an example, compared with the average MAPE, RMSE and MAE of the single model, the average MAPE of the hybrid model is reduced by 47.27%, the average RMSE is reduced by 44.50%, and the average MAE is reduced by 55.34%. Compared with GVMD-ELM-ELM, GVMD-ELM-ARIMA proposed in this paper reduces the MAPE by 60%, the RMSE by 56.85%, and the MAE by 61.61%. The experimental results show that GVMD-ELM-ARIMA has best prediction accuracy, and it provides a new method for predicting the cumulative COVID-19 confirmed data.
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Affiliation(s)
- Guohui Li
- School of Electronic Engineering, Xi'an University of Posts and Telecommunications, Xi'an, Shaanxi 710121, China
| | - Kang Chen
- School of Electronic Engineering, Xi'an University of Posts and Telecommunications, Xi'an, Shaanxi 710121, China
| | - Hong Yang
- School of Electronic Engineering, Xi'an University of Posts and Telecommunications, Xi'an, Shaanxi 710121, China
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Rahmani AM, Azhir E, Naserbakht M, Mohammadi M, Aldalwie AHM, Majeed MK, Taher Karim SH, Hosseinzadeh M. Automatic COVID-19 detection mechanisms and approaches from medical images: a systematic review. MULTIMEDIA TOOLS AND APPLICATIONS 2022; 81:28779-28798. [PMID: 35382107 PMCID: PMC8970643 DOI: 10.1007/s11042-022-12952-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2021] [Revised: 05/09/2021] [Accepted: 03/10/2022] [Indexed: 05/04/2023]
Abstract
Since early 2020, Coronavirus Disease 2019 (COVID-19) has spread widely around the world. COVID-19 infects the lungs, leading to breathing difficulties. Early detection of COVID-19 is important for the prevention and treatment of pandemic. Numerous sources of medical images (e.g., Chest X-Rays (CXR), Computed Tomography (CT), and Magnetic Resonance Imaging (MRI)) are regarded as a desirable technique for diagnosing COVID-19 cases. Medical images of coronavirus patients show that the lungs are filled with sticky mucus that prevents them from inhaling. Today, Artificial Intelligence (AI) based algorithms have made a significant shift in the computer aided diagnosis due to their effective feature extraction capabilities. In this survey, a complete and systematic review of the application of Machine Learning (ML) methods for the detection of COVID-19 is presented, focused on works that used medical images. We aimed to evaluate various ML-based techniques in detecting COVID-19 using medical imaging. A total of 26 papers were extracted from ACM, ScienceDirect, Springerlink, Tech Science Press, and IEEExplore. Five different ML categories to review these mechanisms are considered, which are supervised learning-based, deep learning-based, active learning-based, transfer learning-based, and evolutionary learning-based mechanisms. A number of articles are investigated in each group. Also, some directions for further research are discussed to improve the detection of COVID-19 using ML techniques in the future. In most articles, deep learning is used as the ML method. Also, most of the researchers used CXR images to diagnose COVID-19. Most articles reported accuracy of the models to evaluate model performance. The accuracy of the studied models ranged from 0.84 to 0.99. The studies demonstrated the current status of AI techniques in using AI potentials in the fight against COVID-19.
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Affiliation(s)
- Amir Masoud Rahmani
- Future Technology Research Center, National Yunlin University of Science and Technology, Douliu, Yunlin Taiwan
| | - Elham Azhir
- Research and Development Center, Mobile Telecommunication Company of Iran, Tehran, Iran
| | - Morteza Naserbakht
- Mental Health Research Center, Psychosocial Health Research Institute, Iran University of Medical Sciences, Tehran, Iran
| | - Mokhtar Mohammadi
- Department of Information Technology, College of Engineering and Computer Science, Lebanese French University, Kurdistan Region, Iraq
| | - Adil Hussein Mohammed Aldalwie
- Department of Communication and Computer Engineering, Faculty of Engineering, Cihan University-Erbil, Kurdistan Region, Iraq
| | - Mohammed Kamal Majeed
- Information Technology Department, Faculty of Applied Science, Tishk International University, Erbil, Iraq
| | - Sarkhel H. Taher Karim
- Computer Department, College of Science, University of Halabja, Halabja, Iraq
- Computer Networks Department, Sulaimani Polytechnic University, Technical College of Informatics, Sulaymaniyah, Iraq
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Yuan Y, Sun C, Tang X, Cheng C, Mombaerts L, Wang M, Hu T, Sun C, Guo Y, Li X, Xu H, Ren T, Xiao Y, Xiao Y, Zhu H, Wu H, Li K, Chen C, Liu Y, Liang Z, Cao Z, Zhang HT, Paschaldis IC, Liu Q, Goncalves J, Zhong Q, Yan L. Development and Validation of a Prognostic Risk Score System for COVID-19 Inpatients: A Multi-Center Retrospective Study in China. ENGINEERING (BEIJING, CHINA) 2022; 8:116-121. [PMID: 33282444 PMCID: PMC7695569 DOI: 10.1016/j.eng.2020.10.013] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2020] [Revised: 09/04/2020] [Accepted: 10/11/2020] [Indexed: 05/14/2023]
Abstract
Coronavirus disease 2019 (COVID-19) has become a worldwide pandemic. Hospitalized patients of COVID-19 suffer from a high mortality rate, motivating the development of convenient and practical methods that allow clinicians to promptly identify high-risk patients. Here, we have developed a risk score using clinical data from 1479 inpatients admitted to Tongji Hospital, Wuhan, China (development cohort) and externally validated with data from two other centers: 141 inpatients from Jinyintan Hospital, Wuhan, China (validation cohort 1) and 432 inpatients from The Third People's Hospital of Shenzhen, Shenzhen, China (validation cohort 2). The risk score is based on three biomarkers that are readily available in routine blood samples and can easily be translated into a probability of death. The risk score can predict the mortality of individual patients more than 12 d in advance with more than 90% accuracy across all cohorts. Moreover, the Kaplan-Meier score shows that patients can be clearly differentiated upon admission as low, intermediate, or high risk, with an area under the curve (AUC) score of 0.9551. In summary, a simple risk score has been validated to predict death in patients infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); it has also been validated in independent cohorts.
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Affiliation(s)
- Ye Yuan
- School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Chuan Sun
- School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Xiuchuan Tang
- School of Mechanical Science and Engineering, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Cheng Cheng
- School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Laurent Mombaerts
- Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belval L-4367, Luxembourg
| | - Maolin Wang
- School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Tao Hu
- Department of Emergency, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China
| | - Chenyu Sun
- AMITA Health Saint Joseph Hospital Chicago, Chicago, IL 60657, USA
| | - Yuqi Guo
- School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Xiuting Li
- School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Hui Xu
- Department of Anesthesiology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China
| | - Tongxin Ren
- Huazhong University of Science and Technology-Wuxi Research Institute, Wuxi 214174, China
| | - Yang Xiao
- School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Yaru Xiao
- Department of Emergency, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China
| | - Hongling Zhu
- Division of Cardiology, Department of Internal Medicine, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China
| | - Honghan Wu
- Institute of Health Informatics, University College London, London NW1 2DA, UK
| | - Kezhi Li
- Institute of Health Informatics, University College London, London NW1 2DA, UK
| | - Chuming Chen
- Department of Biomedical Engineering, Southern University of Science and Technology, Shenzhen 518055, China
| | - Yingxia Liu
- Department of Biomedical Engineering, Southern University of Science and Technology, Shenzhen 518055, China
| | - Zhichao Liang
- Department of Infectious Diseases, Shenzhen Key Laboratory of Pathogenic Microbiology and Immunology, National Clinical Research Center for Infectious Disease, The Third People's Hospital of Shenzhen (Second Hospital Affiliated with the Southern University of Science and Technology), Shenzhen 518055, China
| | - Zhiguo Cao
- School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Hai-Tao Zhang
- School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Ioannis Ch Paschaldis
- Department of Electrical and Computer Engineering & Division of Systems Engineering & Department of Biomedical Engineering, Boston University, Boston, MA 02215, USA
| | - Quanying Liu
- Division of Cardiology, Department of Internal Medicine, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China
| | - Jorge Goncalves
- Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belval L-4367, Luxembourg
- Department of Plant Sciences, University of Cambridge, Cambridge CB2 1TN, UK
| | - Qiang Zhong
- Department of Emergency, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China
| | - Li Yan
- Department of Emergency, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China
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Abstract
In this chapter, we mainly focus on the use of AI-driven tools for COVID-19 predictive modeling, screening, and decision-making. We first discuss prediction models, their merits, and pitfalls. We then review deep learning models for COVID-19 detection and/or screening (with experiments) by taking different dataset sizes into account, which is followed by a conclusive study on how big data is big. The chapter provides a journey of deep neural networks for lung abnormality screening, where we consider COVID-19 as a particular case.
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50
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Ahmed MM, Sayed AM, Khafagy GM, El Sayed IT, Elkholy YS, Fares AH, Hasan MD, El Nahas HG, Sarhan MD, Raslan EI, Elsayed RM, Sayed AA, Elmeshmeshy EI, Yassen RM, Tawfik NM, Hussein HA, Gaber DM, Shehata MM, Fares S. Accuracy of the Traditional COVID-19 Phone Triaging System and Phone Triage-Driven Deep Learning Model. J Prim Care Community Health 2022; 13:21501319221113544. [PMID: 35869692 PMCID: PMC9310285 DOI: 10.1177/21501319221113544] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
Objectives: During the COVID-19 pandemic, a quick and reliable phone-triage system is critical for early care and efficient distribution of hospital resources. The study aimed to assess the accuracy of the traditional phone-triage system and phone triage-driven deep learning model in the prediction of positive COVID-19 patients. Setting: This is a retrospective study conducted at the family medicine department, Cairo University. Methods: The study included a dataset of 943 suspected COVID-19 patients from the phone triage during the first wave of the pandemic. The accuracy of the phone triaging system was assessed. PCR-dependent and phone triage-driven deep learning model for automated classifications of natural human responses was conducted. Results: Based on the RT-PCR results, we found that myalgia, fever, and contact with a case with respiratory symptoms had the highest sensitivity among the symptoms/ risk factors that were asked during the phone calls (86.3%, 77.5%, and 75.1%, respectively). While immunodeficiency, smoking, and loss of smell or taste had the highest specificity (96.9%, 83.6%, and 74.0%, respectively). The positive predictive value (PPV) of phone triage was 48.4%. The classification accuracy achieved by the deep learning model was 66%, while the PPV was 70.5%. Conclusion: Phone triage and deep learning models are feasible and convenient tools for screening COVID-19 patients. Using the deep learning models for symptoms screening will help to provide the proper medical care as early as possible for those at a higher risk of developing severe illness paving the way for a more efficient allocation of the scanty health resources.
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