1
|
Diekmann I, Krücken J, Kuzmina TA, Bredtmann CM, Louro M, Kharchenko VA, Tzelos T, Matthews JB, Madeira de Carvalho LM, von Samson-Himmelstjerna G. Comparative phylogenetic and sequence identity analysis of internal transcribed spacer 2 and cytochrome c oxidase subunit I as DNA barcode markers for the most common equine Strongylidae species. INFECTION, GENETICS AND EVOLUTION : JOURNAL OF MOLECULAR EPIDEMIOLOGY AND EVOLUTIONARY GENETICS IN INFECTIOUS DISEASES 2025; 129:105729. [PMID: 39955017 DOI: 10.1016/j.meegid.2025.105729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2024] [Revised: 02/07/2025] [Accepted: 02/12/2025] [Indexed: 02/17/2025]
Abstract
Morphologically, 64 strongylid species have been described in equines. Co-infections are common, with up to 29 species reported in a single horse. Morphological identification of these species is time consuming and requires expert knowledge due to their similar appearance. Therefore, non-invasive identification methods are needed. DNA barcoding offers a rapid and reliable tool for species identification and the discovery of cryptic species for these most common parasitic nematodes of equines. In total, 269 cytochrome c oxidase subunit I (COI) gene and 312 internal transcribed spacer 2 (ITS-2) sequences from 27 equine Strongylidae species, including sequences from two uncharacterised species, Coronocyclus sagittatus and Triodontophorus tenuicollis, were generated and combined with COI and ITS-2 sequences data from six Cyathostominae species from previous studies. This study represents a comprehensive DNA barcoding analysis of 22 Cyathostominae and six Strongylinae species using mitochondrial COI gene and ITS-2 sequences. Maximum likelihood phylogenetic trees were constructed and the intra- and interspecific genetic distances for both markers were compared. Analysis revealed complex phylogenetic relationships. Para- and polyphyletic relationships were observed among most genera within Strongylinae and Cyathostominae. This challenges current morphological classifications. Although both markers showed overlapping pairwise identities in intra- and inter-species comparisons, COI had higher discriminatory power than ITS-2. Expanding the COI and ITS-2 reference database, including the first sequences for Coronocyclus sagittatus and Triodontophorus tenuicollis, improve a reliable species identification and advanced studies on Strongylinae and Cyathostominae diversity using barcoding and metabarcoding.
Collapse
Affiliation(s)
- Irina Diekmann
- Institute for Parasitology and Tropical Veterinary Medicine, Department of Veterinary Medicine, Freie Universität Berlin, Germany; Veterinary Centre for Resistance Research, Freie Universität Berlin, Berlin, Germany.
| | - Jürgen Krücken
- Institute for Parasitology and Tropical Veterinary Medicine, Department of Veterinary Medicine, Freie Universität Berlin, Germany; Veterinary Centre for Resistance Research, Freie Universität Berlin, Berlin, Germany.
| | - Tetiana A Kuzmina
- I. I. Schmalhausen Institute of Zoology, National Academy of Sciences of Ukraine, Kyiv, Ukraine; Institute of Parasitology, Slovak Academy of Sciences, Kosice, Slovakia.
| | - Christina M Bredtmann
- Institute for Parasitology and Tropical Veterinary Medicine, Department of Veterinary Medicine, Freie Universität Berlin, Germany; Veterinary Centre for Resistance Research, Freie Universität Berlin, Berlin, Germany
| | - Mariana Louro
- Institute for Parasitology and Tropical Veterinary Medicine, Department of Veterinary Medicine, Freie Universität Berlin, Germany; Veterinary Centre for Resistance Research, Freie Universität Berlin, Berlin, Germany; CIISA - Centre for Interdisciplinary Research in Animal Health, Faculty of Veterinary Medicine, University of Lisbon, Lisbon, Portugal
| | - Vitaliy A Kharchenko
- I. I. Schmalhausen Institute of Zoology, National Academy of Sciences of Ukraine, Kyiv, Ukraine
| | - Thomas Tzelos
- Moredun Research Institute, Pentlands Science Park, Bush Loan, Penicuik, UK.
| | | | - Luís M Madeira de Carvalho
- CIISA - Centre for Interdisciplinary Research in Animal Health, Faculty of Veterinary Medicine, University of Lisbon, Lisbon, Portugal.
| | - Georg von Samson-Himmelstjerna
- Institute for Parasitology and Tropical Veterinary Medicine, Department of Veterinary Medicine, Freie Universität Berlin, Germany; Veterinary Centre for Resistance Research, Freie Universität Berlin, Berlin, Germany.
| |
Collapse
|
2
|
Forman R, Lalzar M, Inbar M, Berman TS. Molecular analysis of feces reveals gastrointestinal nematodes in reintroduced wild asses of the Negev desert. Int J Parasitol Parasites Wildl 2024; 25:100980. [PMID: 39280353 PMCID: PMC11402423 DOI: 10.1016/j.ijppaw.2024.100980] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Revised: 08/27/2024] [Accepted: 08/27/2024] [Indexed: 09/18/2024]
Abstract
Reintroduced animals face disease risks, potentially impacting both the reintroduced and the local wildlife/domestic populations. This study focuses on the Asiatic wild asses (Equus hemionus) reintroduced to the Negev desert in southern Israel. Despite potential threats of disease spill-over to and from domesticated donkeys and horses in the area, there are no records of the gastrointestinal nematodes (GIN) of the wild ass population. We used DNA metabarcoding on fecal samples of wild asses collected across seasons and habitats, near water sources that they frequently use. Ten GIN species were detected in the feces, nine belonging to the family Strongylidae, which commonly infects and causes disease in equids worldwide, such as horses, zebras, and donkeys. Some of these Strongylidae species are also found in domesticated equids in Israel, thus raising concerns regarding potential parasite transmission between wild and domestic animals. The high prevalence of certain GIN species suggests frequent transmission, likely due to the congregation of the wild asses around water sources. While we observed statistically significant variations in some GIN species across seasons and habitats, we did not find clear overall differences between GIN communities. DNA metabarcoding proves to be a valuable tool for identifying GIN species in wild animals, with potential applications in monitoring their health and preventing disease transmission to and from domestic animals.
Collapse
Affiliation(s)
- R Forman
- Department of Evolutionary and Environmental Biology, University of Haifa, Israel
| | - M Lalzar
- Bioinformatics Services Unit, University of Haifa, Israel
| | - M Inbar
- Department of Evolutionary and Environmental Biology, University of Haifa, Israel
| | - T S Berman
- Hula Research Centre, Department of Animal Sciences, Tel-Hai Academic College, Upper Galilee, 1220800, Israel
- MIGAL- Galilee Research Institute, 11016, Kiryat Shmona, Israel
| |
Collapse
|
3
|
Investigation of Strongyle Prevalence and Associated Risk Factors in Horses in and around Alage District, Ethiopia. J Parasitol Res 2022; 2022:3935008. [PMID: 35989863 PMCID: PMC9391126 DOI: 10.1155/2022/3935008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Accepted: 07/28/2022] [Indexed: 11/28/2022] Open
Abstract
Background Horses are used for a variety of purposes in Ethiopia. However, their service is hampered by a variety of health issues. Strongylosis is a parasitic infestation of the gastrointestinal tract that has a significant impact on the working ability, reproductive performance, well-being, and welfare of horses. The existence of Strongylosis in the study area is reported from clinical cases; however, its prevalence has not been well studied. Objective The current study was carried out from January 2019 to July 2019, to determine the prevalence and associated risk factors of Strongyle in horses in and around Alage district. Methods A cross-sectional study design was used, and 384 horses were sampled from three peasant associations inseparably. The floatation technique was used in laboratory analysis. Result Strongylosis was discovered in 67.19 percent of the cases. In Naka, Dilbato, and Koricho peasant associations, the infestation magnitudes were 64.1%, 68%, and 69.5%, respectively. The increased level of animal-related prevalence was observed in male (68.1 percent), young (84.4 percent), and poor body condition (90 percent) horses. Age and body condition scores were statistically significant associations with the disease under study at p ≤ 0.000. While sex and peasant associations did not predict the problem significantly (p ≤ 0.05), young horses and horses in poor and medium body conditions are 4.66 (CI: 2.22–9.76), 9.63 (CI: 3.77–24.63), and 1.93 (1.03–3.60) times more likely to be infected with Strongylosis, respectively. Conclusions The occurrence of Strongylosis is determined independently by age and BCS. Strongyle infestations are common in horses in the study area, posing a significant barrier to horse production and well-being. As a result, appropriate disease prevention and control measures should be implemented.
Collapse
|
4
|
Bianchi MV, Mello LSD, Wentz MF, Panziera W, Soares JF, Sonne L, Driemeier D, Pavarini SP. Fatal parasite-induced enteritis and typhlocolitis in horses in Southern Brazil. REVISTA BRASILEIRA DE PARASITOLOGIA VETERINARIA 2019; 28:443-450. [DOI: 10.1590/s1984-29612019056] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2019] [Accepted: 06/25/2019] [Indexed: 11/22/2022]
Abstract
Abstract Diseases related to the alimentary system are the main cause of death in horses. This retrospective study aimed to describe the pathological findings of fatal parasite-induced enteritis and typhlocolitis caused by cyathostominae, Eimeria leuckarti, Balantidium coli, and Strongyloides westeri in horses. The records of parasite-induced intestinal lesions in horses necropsied in Southern Brazil between 2005 and 2017 were reviewed. Ten horses had fatal parasitic enteritis and/or typhlocolitis, and the main causes were: cyathostominae typhlocolitis (6/10), E. leuckarti enteritis (1/10), S. westeri enteritis (1/10), B. coli colitis related to cyathostominae (1/10), and infection by multiple agents (1/10). Cyathostominae typhlocolitis showed marked mucosal thickening, with multifocal elevated nodules containing tangled filiform parasites. Microscopic examination revealed that the mucosa and submucosa had encysted parasitic structures surrounded by eosinophilic and granulomatous inflammation. E. leuckarti enteritis was microscopically characterized by macrogamonts, microgamonts, and oocysts inside the host cells. S. westeri enteritis showed microscopic atrophy of the villi with numerous mucosal encysted parasitic structures. B. coli typhlocolitis showed severe diffuse mucosal reddening, with microscopic superficial mucosal necrosis associated with multiple protozoan trophozoites. Fatal parasite-induced enteritis and typhlocolitis are important causes of death in horses in Southern Brazil.
Collapse
|
5
|
Peachey LE, Pinchbeck GL, Matthews JB, Burden FA, Lespine A, von Samson-Himmelstjerna G, Krücken J, Hodgkinson JE. P-glycoproteins play a role in ivermectin resistance in cyathostomins. INTERNATIONAL JOURNAL FOR PARASITOLOGY-DRUGS AND DRUG RESISTANCE 2017; 7:388-398. [PMID: 29121562 PMCID: PMC5681340 DOI: 10.1016/j.ijpddr.2017.10.006] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/19/2017] [Revised: 10/17/2017] [Accepted: 10/23/2017] [Indexed: 01/08/2023]
Abstract
Anthelmintic resistance is a global problem that threatens sustainable control of the equine gastrointestinal cyathostomins (Phylum Nematoda; Superfamily Strongyloidea). Of the three novel anthelmintic classes that have reached the veterinary market in the last decade, none are currently licenced in horses, hence current control regimens focus on prolonging the useful lifespan of licenced anthelmintics. This approach would be facilitated by knowledge of the resistance mechanisms to the most widely used anthelmintics, the macrocyclic lactones (ML). There are no data regarding resistance mechanisms to MLs in cyathostomins, although in other parasitic nematodes, the ABC transporters, P-glycoproteins (P-gps), have been implicated in playing an important role. Here, we tested the hypothesis that P-gps are, at least in part, responsible for reduced sensitivity to the ML ivermectin (IVM) in cyathostomins; first, by measuring transcript levels of pgp-9 in IVM resistant versus IVM sensitive third stage larvae (L3) pre-and post-IVM exposure in vitro. We then tested the effect of a range of P-gp inhibitors on the effect of IVM against the same populations of L3 using the in vitro larval development test (LDT) and larval migration inhibition test (LMIT). We demonstrated that, not only was pgp-9 transcription significantly increased in IVM resistant compared to IVM sensitive L3 after anthelmintic exposure (p < 0.001), but inhibition of P-gp activity significantly increased sensitivity of the larvae to IVM in vitro, an effect only observed in the IVM resistant larvae in the LMIT. These data strongly implicate a role for P-gps in IVM resistance in cyathostomins. Importantly, this raises the possibility that P-gp inhibitor-IVM combination treatments might be used in vivo to increase the effectiveness of IVM against cyathostomins in Equidae. Pgp-9 transcript levels were higher in ivermectin resistant versus susceptible cyathostomin populations. P-gp inhibitors increased ivermectin effect against cyathostomins in vitro. P-gp activity may play a role in ivermectin resistance in cyathostomins.
Collapse
Affiliation(s)
- L E Peachey
- Institute of Infection and Global Health, University of Liverpool, Liverpool Science Park IC2, Brownlow Hill, Liverpool, United Kingdom.
| | - G L Pinchbeck
- Institute of Infection and Global Health, University of Liverpool, Liverpool Science Park IC2, Brownlow Hill, Liverpool, United Kingdom
| | - J B Matthews
- Moredun Research Institute, Pentlands Science Park, Bush Loan, Midlothian, Scotland, United Kingdom
| | - F A Burden
- The Donkey Sanctuary, Sidmouth, Devon, United Kingdom
| | - A Lespine
- Toxalim (Research Centre in Food Toxicology), Université de Toulouse, INRA, ENVT, INP-Purpan, UPS, Toulouse, France
| | | | - J Krücken
- Institute for Parasitology and Tropical Veterinary Medicine, Freie Universität Berlin, Berlin, Germany
| | - J E Hodgkinson
- Institute of Infection and Global Health, University of Liverpool, Liverpool Science Park IC2, Brownlow Hill, Liverpool, United Kingdom
| |
Collapse
|
6
|
Bredtmann CM, Krücken J, Murugaiyan J, Kuzmina T, von Samson-Himmelstjerna G. Nematode Species Identification-Current Status, Challenges and Future Perspectives for Cyathostomins. Front Cell Infect Microbiol 2017; 7:283. [PMID: 28702376 PMCID: PMC5487379 DOI: 10.3389/fcimb.2017.00283] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Accepted: 06/12/2017] [Indexed: 12/02/2022] Open
Abstract
Human and animal health is globally affected by a variety of parasitic helminths. The impact of co-infections and development of anthelmintic resistance requires improved diagnostic tools, especially for parasitic nematodes e.g., to identify resistant species or attribute pathological effects to individual species or particular species combinations. In horses, co-infection with cyathostomins is rather a rule than an exception with typically 5 to 15 species (out of more than 40 described) per individual host. In cyathostomins, reliable morphological species differentiation is currently limited to adults and requires highly specialized expertize while precise morphological identification of eggs and early stage larvae is impossible. The situation is further complicated by a questionable validity of some cyathostomins while others might actually represent cryptic species complexes. Several molecular methods using different target sequences were established to overcome these limitations. For adult worms, PCR followed by sequencing of mitochondrial genes or external or internal ribosomal RNA spacers is suitable to genetically confirm morphological identifications. The most commonly used method to differentiate eggs or larvae is the reverse-line-blot hybridization assay. However, both methods suffer from the fact that target sequences are not available for many species or even that GenBank® entries are unreliable regarding the cyathostomin species. Recent advances in proteomic tools for identification of metazoans including insects and nematodes of the genus Trichinella will be evaluated for suitability to diagnose cyathostomins. Future research should focus on the comparative analysis of morphological, molecular and proteomic data from the same cyathostomin specimen to optimize tools for species-specific identification.
Collapse
Affiliation(s)
- Christina M Bredtmann
- Department of Veterinary Medicine, Institute for Parasitology and Tropical Veterinary Medicine, Freie Universität BerlinBerlin, Germany
| | - Jürgen Krücken
- Department of Veterinary Medicine, Institute for Parasitology and Tropical Veterinary Medicine, Freie Universität BerlinBerlin, Germany
| | - Jayaseelan Murugaiyan
- Department of Veterinary Medicine, Institute for Animal Hygiene and Environmental Health, Freie Universität BerlinBerlin, Germany
| | - Tetiana Kuzmina
- Department of Parasitology, I.I. Schmalhausen Institute of ZoologyKyiv, Ukraine
| | - Georg von Samson-Himmelstjerna
- Department of Veterinary Medicine, Institute for Parasitology and Tropical Veterinary Medicine, Freie Universität BerlinBerlin, Germany
| |
Collapse
|
7
|
New insights into sequence variation in the IGS region of 21 cyathostomin species and the implication for molecular identification. Parasitology 2012; 139:1063-73. [DOI: 10.1017/s0031182012000467] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
SUMMARYCyathostomins comprise a group of 50 species of parasitic nematodes that infect equids. Ribosomal DNA sequences, in particular the intergenic spacer (IGS) region, have been utilized via several methodologies to identify pre-parasitic stages of the commonest species that affect horses. These methods rely on the availability of accurate sequence information for each species, as well as detailed knowledge of the levels of intra- and inter-specific variation. Here, the IGS DNA region was amplified and sequenced from 10 cyathostomin species for which sequence was not previously available. Also, additional IGS DNA sequences were generated from individual worms of 8 species already studied. Comparative analysis of these sequences revealed a greater range of intra-specific variation than previously reported (up to 23%); whilst the level of inter-specific variation (3–62%) was similar to that identified in earlier studies. The reverse line blot (RLB) method has been used to exploit the cyathostomin IGS DNA region for species identification. Here, we report validation of novel and existing DNA probes for identification of cyathostomins using this method and highlight their application in differentiating life-cycle stages such as third-stage larvae that cannot be identified to species by morphological means†.
Collapse
|
8
|
Kharchenko VA, Kuzmina TA. Morphology and diagnosis of the fourth-stage larva of Coronocyclus labratus (Looss, 1900) (Nematoda: Strongyloidea) parasitising equids. Syst Parasitol 2010; 77:29-34. [PMID: 20700695 DOI: 10.1007/s11230-010-9255-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2010] [Accepted: 04/07/2010] [Indexed: 11/25/2022]
Abstract
The fourth larval stage (L4) of Coronocyclus labratus (Looss, 1900) Hartwich, 1986, one of the common species of the Cyathostominae found in equids, is identified and described. The larvae found were identified as C. labratus by finding moulting forms possessing characters of both larval and adult stages. The larvae are similar to those of Cylicocyclus leptostomum (Kotlán, 1920) Foster, 1936, Cyathostomum catinatum Looss, 1900 and Cylicostephanus goldi (Boulenger, 1917) Lichtenfels, 1975. The buccal capsule (BC) wall of the L4 of Cylicocyclus leptostomum is thinner than that of Coronocyclus labratus, and the ring of the oesophageal funnel is comparatively less well developed. In C. labratus the dorsal tooth protrudes only slightly into the buccal cavity, and this larva possesses a characteristically elongate, pyriform oesophagus. In Cyathostomum catinatum, the BC walls are thicker than in Coronocyclus labratus, and the dorsal tooth is more bluntly pointed. Sublateral teeth, if present, are bluntly pointed in the former species, but usually absent or indistinct in C. labratus. Larvae of Cylicostephanus goldi differ from those of Coronocyclus labratus in the larger size of the BC.
Collapse
Affiliation(s)
- Vitaliy A Kharchenko
- Schmalhausen Institute of Zoology, National Academy of Sciences of Ukraine, Kyiv, Ukraine.
| | | |
Collapse
|