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For: Kang HW, Erban R. Multiscale Stochastic Reaction-Diffusion Algorithms Combining Markov Chain Models with Stochastic Partial Differential Equations. Bull Math Biol 2019;81:3185-3213. [PMID: 31165406 PMCID: PMC6677718 DOI: 10.1007/s11538-019-00613-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2018] [Accepted: 05/09/2019] [Indexed: 12/21/2022]
Number Cited by Other Article(s)
1
Chae SJ, Shin S, Lee K, Lee S, Kim JK. From homogeneity to heterogeneity: Refining stochastic simulations of gene regulation. Comput Struct Biotechnol J 2025;27:411-422. [PMID: 39906159 PMCID: PMC11791169 DOI: 10.1016/j.csbj.2025.01.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2024] [Revised: 01/01/2025] [Accepted: 01/04/2025] [Indexed: 02/06/2025]  Open
2
Erban R, Winkelmann S. Multi-Grid Reaction-Diffusion Master Equation: Applications to Morphogen Gradient Modelling. Bull Math Biol 2024;87:6. [PMID: 39601934 PMCID: PMC11602816 DOI: 10.1007/s11538-024-01377-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2024] [Accepted: 10/21/2024] [Indexed: 11/29/2024]
3
Matveev VV. Close agreement between deterministic versus stochastic modeling of first-passage time to vesicle fusion. Biophys J 2022;121:4569-4584. [PMID: 36815708 PMCID: PMC9748373 DOI: 10.1016/j.bpj.2022.10.033] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Revised: 09/13/2022] [Accepted: 10/24/2022] [Indexed: 11/22/2022]  Open
4
Smith CA, Yates CA. Incorporating domain growth into hybrid methods for reaction-diffusion systems. J R Soc Interface 2021;18:20201047. [PMID: 33849339 DOI: 10.1098/rsif.2020.1047] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
5
KhudaBukhsh WR, Kang HW, Kenah E, Rempała GA. Incorporating age and delay into models for biophysical systems. Phys Biol 2021;18:015002. [PMID: 33075757 PMCID: PMC9211760 DOI: 10.1088/1478-3975/abc2ab] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
6
Cao Y, Linda P, Seitaridou E. Stochastic Simulation of Biochemical Systems: In Memory of Dan T. Gillespie's contributions. Bull Math Biol 2019;81:2819-2821. [PMID: 31264134 DOI: 10.1007/s11538-019-00633-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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