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Sanhueza T, Hernández I, Sagredo-Sáez C, Villanueva-Guerrero A, Alvarado R, Mujica MI, Fuentes-Quiroz A, Menendez E, Jorquera-Fontena E, Valadares RBDS, Herrera H. Juvenile Plant-Microbe Interactions Modulate the Adaptation and Response of Forest Seedlings to Rapid Climate Change. PLANTS (BASEL, SWITZERLAND) 2024; 13:175. [PMID: 38256729 PMCID: PMC10819047 DOI: 10.3390/plants13020175] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2023] [Revised: 10/02/2023] [Accepted: 10/13/2023] [Indexed: 01/24/2024]
Abstract
The negative impacts of climate change on native forest ecosystems have created challenging conditions for the sustainability of natural forest regeneration. These challenges arise primarily from abiotic stresses that affect the early stages of forest tree development. While there is extensive evidence on the diversity of juvenile microbial symbioses in agricultural and fruit crops, there is a notable lack of reports on native forest plants. This review aims to summarize the critical studies conducted on the diversity of juvenile plant-microbe interactions in forest plants and to highlight the main benefits of beneficial microorganisms in overcoming environmental stresses such as drought, high and low temperatures, metal(loid) toxicity, nutrient deficiency, and salinity. The reviewed studies have consistently demonstrated the positive effects of juvenile plant-microbiota interactions and have highlighted the potential beneficial attributes to improve plantlet development. In addition, this review discusses the beneficial attributes of managing juvenile plant-microbiota symbiosis in the context of native forest restoration, including its impact on plant responses to phytopathogens, promotion of nutrient uptake, facilitation of seedling adaptation, resource exchange through shared hyphal networks, stimulation of native soil microbial communities, and modulation of gene and protein expression to enhance adaptation to adverse environmental conditions.
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Affiliation(s)
- Tedy Sanhueza
- Laboratorio de Silvicultura, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile; (T.S.); (C.S.-S.); (A.V.-G.); (R.A.); (A.F.-Q.)
| | - Ionel Hernández
- Plant Physiology and Biochemistry Department, National Institute of Agricultural Science, Carretera a Tapaste Km 3 y ½, San José de las Lajas 32700, Mayabeque, Cuba;
| | - Cristiane Sagredo-Sáez
- Laboratorio de Silvicultura, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile; (T.S.); (C.S.-S.); (A.V.-G.); (R.A.); (A.F.-Q.)
| | - Angela Villanueva-Guerrero
- Laboratorio de Silvicultura, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile; (T.S.); (C.S.-S.); (A.V.-G.); (R.A.); (A.F.-Q.)
| | - Roxana Alvarado
- Laboratorio de Silvicultura, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile; (T.S.); (C.S.-S.); (A.V.-G.); (R.A.); (A.F.-Q.)
| | - Maria Isabel Mujica
- Instituto de Ciencias Ambientales y Evolutivas, Universidad Austral de Chile, Valdivia 5110566, Chile;
| | - Alejandra Fuentes-Quiroz
- Laboratorio de Silvicultura, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile; (T.S.); (C.S.-S.); (A.V.-G.); (R.A.); (A.F.-Q.)
| | - Esther Menendez
- Departamento de Microbiología y Genética, Instituto de Investigación en Agrobiotecnología (CIALE), Universidad de Salamanca, 37008 Salamanca, Spain;
| | - Emilio Jorquera-Fontena
- Departamento de Ciencias Agropecuarias y Acuícolas, Facultad de Recursos Naturales, Universidad Catolica de Temuco, Temuco P.O. Box 15-D, Chile;
| | | | - Héctor Herrera
- Laboratorio de Silvicultura, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile; (T.S.); (C.S.-S.); (A.V.-G.); (R.A.); (A.F.-Q.)
- Laboratorio de Ecosistemas y Bosques, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile
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Hernández I, Taulé C, Pérez-Pérez R, Battistoni F, Fabiano E, Villanueva-Guerrero A, Nápoles MC, Herrera H. Endophytic Seed-Associated Bacteria as Plant Growth Promoters of Cuban Rice ( Oryza sativa L.). Microorganisms 2023; 11:2317. [PMID: 37764161 PMCID: PMC10537011 DOI: 10.3390/microorganisms11092317] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2023] [Revised: 08/19/2023] [Accepted: 08/24/2023] [Indexed: 09/29/2023] Open
Abstract
Cuban rice cultivars INCA LP-5 and INCA LP-7 are widely distributed in Cuba and Caribbean countries. Although there are studies about rhizospheric bacteria associated with these cultivars, there are no reports about their seed-associated bacteria. This study aimed to isolate endophytic bacteria from rice seeds and select those with the greatest plant growth-promoting traits. A total of nineteen bacterial strains from the genera Pantoea, Bacillus, Paenibacillus, and Pseudomonas were isolated from the husk and endosperm of rice seeds. The strains Pantoea sp. S5-1, Pseudomonas sp. S5-38, and Pseudomonas sp. S7-1 were classified as the most promissory to increase rice growth as they demonstrated the presence of multiple plant growth-promoting traits such as the production of auxins, phosphate, and potassium solubilization, the production of siderophores, and the inhibition of the phytopathogen Pyricularia oryzae. The inoculation of strains of Pantoea sp. and Pseudomonas spp. in rice improves the height, root length, fresh weight, and dry weight of the shoot and root after 21 days post-inoculation in hydroponic assays. This study constitutes the first report on Cuban rice cultivars about the presence of endophytes in seeds and their potential to promote seedling growth. Pantoea sp. S5-1, Pseudomonas sp. S5-38, and Pseudomonas sp. S7-1 were selected as the more promising strains for the development of bio-stimulators or bio-inoculants for Cuban rice crops.
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Affiliation(s)
- Ionel Hernández
- National Institute of Agricultural Science, Plant Physiology and Biochemistry Department, Carretera a Tapaste Km 3 y ½, San José de las Lajas 32700, Mayabeque, Cuba; (R.P.-P.); (M.C.N.)
| | - Cecilia Taulé
- Biological Research Institute Clemente Estable, Microbial Biochemistry and Genomics Department, Avenida Italia 3318, Montevideo 11600, Uruguay; (C.T.); (F.B.); (E.F.)
| | - Reneé Pérez-Pérez
- National Institute of Agricultural Science, Plant Physiology and Biochemistry Department, Carretera a Tapaste Km 3 y ½, San José de las Lajas 32700, Mayabeque, Cuba; (R.P.-P.); (M.C.N.)
| | - Federico Battistoni
- Biological Research Institute Clemente Estable, Microbial Biochemistry and Genomics Department, Avenida Italia 3318, Montevideo 11600, Uruguay; (C.T.); (F.B.); (E.F.)
| | - Elena Fabiano
- Biological Research Institute Clemente Estable, Microbial Biochemistry and Genomics Department, Avenida Italia 3318, Montevideo 11600, Uruguay; (C.T.); (F.B.); (E.F.)
| | - Angela Villanueva-Guerrero
- Laboratorio de Silvicultura, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile;
- Programa de Magister en Manejo de Recursos Naturales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile
| | - María Caridad Nápoles
- National Institute of Agricultural Science, Plant Physiology and Biochemistry Department, Carretera a Tapaste Km 3 y ½, San José de las Lajas 32700, Mayabeque, Cuba; (R.P.-P.); (M.C.N.)
| | - Héctor Herrera
- Laboratorio de Silvicultura, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile;
- Laboratorio de Ecosistemas y Bosques, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Medioambiente, Universidad de La Frontera, Temuco 4811230, Chile
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Kaur J, Mudgal G, Chand K, Singh GB, Perveen K, Bukhari NA, Debnath S, Mohan TC, Charukesi R, Singh G. An exopolysaccharide-producing novel Agrobacterium pusense strain JAS1 isolated from snake plant enhances plant growth and soil water retention. Sci Rep 2022; 12:21330. [PMID: 36494408 PMCID: PMC9734154 DOI: 10.1038/s41598-022-25225-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Accepted: 11/28/2022] [Indexed: 12/13/2022] Open
Abstract
A peculiar bacterial growth was very often noticed in leaf-initiated tissue cultures of Sansevieria trifasciata, a succulent belonging to the Asparagaceae family. The isolate left trails of some highly viscous material on the walls of the suspension vessels or developed a thick overlay on semisolid media without adversities in plant growth. FTIR identified this substance to be an extracellular polysaccharide. Various morphological, biochemical tests, and molecular analyses using 16S rRNA, atpD, and recA genes characterized this isolate JAS1 as a novel strain of Agrobacterium pusense. Its mucoidal growth over Murashige and Skoog media yielded enormous exopolysaccharide (7252 mg l-1), while in nutrient agar it only developed fast-growing swarms. As a qualifying plant growth-promoting bacteria, it produces significant indole-3-acetic acid (86.95 mg l-1), gibberellic acid (172.98 mg l-1), ammonia (42.66 µmol ml-1). Besides, it produces siderophores, 1-aminocyclopropane-1-carboxylic acid deaminase, fixes nitrogen, forms biofilms, and productively solubilizes soil inorganic phosphates, and zinc. Under various treatments with JAS1, wheat and chickpea resulted in significantly enhanced shoot and root growth parameters. PGP effects of JAS1 positively enhanced plants' physiological growth parameters reflecting significant increments in overall chlorophyll, carotenoids, proline, phenols, flavonoids, and sugar contents. In addition, the isolated strain maintained both plant and soil health under an intermittent soil drying regime, probably by both its PGP and EPS production attributes, respectively.
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Affiliation(s)
- Jaspreet Kaur
- grid.448792.40000 0004 4678 9721University Institute of Biotechnology, Chandigarh University, Gharuan, Mohali, Punjab 140413 India
| | - Gaurav Mudgal
- grid.448792.40000 0004 4678 9721University Institute of Biotechnology, Chandigarh University, Gharuan, Mohali, Punjab 140413 India
| | - Kartar Chand
- grid.448792.40000 0004 4678 9721University Institute of Biotechnology, Chandigarh University, Gharuan, Mohali, Punjab 140413 India
| | - Gajendra B. Singh
- grid.448792.40000 0004 4678 9721University Institute of Biotechnology, Chandigarh University, Gharuan, Mohali, Punjab 140413 India
| | - Kahkashan Perveen
- grid.56302.320000 0004 1773 5396Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, 11495 Saudi Arabia
| | - Najat A. Bukhari
- grid.56302.320000 0004 1773 5396Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, 11495 Saudi Arabia
| | - Sandip Debnath
- grid.440987.60000 0001 2259 7889Department of Genetics and Plant Breeding, Palli Siksha Bhavana (Institute of Agriculture), Visva-Bharati University, Sriniketan, Birbhum, West Bengal 731236 India
| | - Thotegowdanapalya C. Mohan
- Department of Biotechnology and Bioinformatics, School of Life Sciences, JSS Academy of Higher Education and Research, Bannimantapa Road, Mysore, 570015 India
| | - Rajulu Charukesi
- Department of Biotechnology and Bioinformatics, School of Life Sciences, JSS Academy of Higher Education and Research, Bannimantapa Road, Mysore, 570015 India
| | - Gaurav Singh
- Stress Signaling to the Nucleus, CNRS-Institute of Molecular Biology of Plants, 12 Rue du General-Zimmer, 67000 Strasbourg, France
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Salinity Influences Endophytic Bacterial Communities in Rice Roots from the Indian Sundarban Area. Curr Microbiol 2022; 79:238. [PMID: 35779137 DOI: 10.1007/s00284-022-02936-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2022] [Accepted: 06/14/2022] [Indexed: 11/03/2022]
Abstract
In "Sundarbans", the coastal regions of the West Bengal, soil salinity has always been one of the major causes of reduction in yield in these regions. The use of endophytic is a well-demanded strategy to mitigate the problems of salt stress and rice productivity. The present study attempted to analyze rice root endogenous microbial diversity and their relationship with soil salinity and physicochemical factors in the salt stressed region of Sundarbans, India using amplicon metagenomics approaches. Our investigation indicates, that the unique microbiome slightly acidic nutrient enriched non-saline zone is characterized by microbial genera that reported either having plant growth promotion (Flavobacterium, Novosphingobium, and Kocuria) or biocontrol abilities (Leptotrichia), whereas high ionic alkaline saline stressed zone dominated with either salt-tolerant microbes or less characterized endophytes (Arcobacter and Vogesella). The number of genera represented by significantly abundant OTUs was higher in the non-saline zone compared to that of the saline stressed zone probably due to higher nutrient concentrations and the absence of abiotic stress factors including salinity. Physicochemical parameters like nitrogen, phosphorus, and potassium were found significantly positively correlated with Muribaculaceae highly enriched in the non-saline zone. However, relative dissolved oxygen was found significantly negatively correlated with Rikenellaceae and Desulfovibrionaceae, enriched in the non-saline soil. This study first provides the detailed characterizations of rice root endophytic bacterial communities as well as their diversity contributed by measured environmental parameters in salinity Sundarbans areas. Since this study deals with two gradients of salinity, connecting the microbial diversity with the salinity range could be targeted for the use as "bioindicator" taxa and bio-fertilizer formulation in salt-affected regions.
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