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Cho HS, Lee J. Taxonomic reinvestigation of the genus Tetradesmus (Scenedesmaceae; Sphaeropleales) based on morphological characteristics and chloroplast genomes. FRONTIERS IN PLANT SCIENCE 2024; 15:1303175. [PMID: 38419779 PMCID: PMC10899504 DOI: 10.3389/fpls.2024.1303175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Accepted: 01/19/2024] [Indexed: 03/02/2024]
Abstract
The genus Tetradesmus (Scenedesmaceae; Sphaeropleales) comprises one of the most abundant green algae in freshwater environments. It includes morphologically diverse species that exhibit bundle-like, plane-arranged coenobia, and unicells, because several different Scenedesmus-like groups were integrated into this genus based on phylogenetic analysis. Nevertheless, there is no clear information regarding the phylogenetic relationship of Tetradesmus species, determined using several marker genes, because of low phylogenetic support and insufficient molecular data. Currently, genome information is available from diverse taxa, which could provide high-resolution evolutionary relationships. In particular, phylogenetic studies using chloroplast genomes demonstrated the potential to establish high-resolution phylogenetic relationships. However, only three chloroplast genomes are available from the genus Tetradesmus. In this study, we newly generated 9 chloroplast genomes from Tetradesmus and constructed a high-resolution phylogeny using a concatenated alignment of 69 chloroplast protein sequences. We also report one novel species (T. lancea), one novel variety (T. obliquus var. spiraformis), and two novel formae (T. dissociatus f. oviformis, T. obliquus f. rectilineare) within the genus Tetradesmus based on morphological characteristics (e.g., cellular arrangements and coenobial types) and genomic features (e.g., different exon-intron structures in chloroplast genomes). Moreover, we taxonomically reinvestigated the genus Tetradesmus based on these results. Altogether, our study can provide a comprehensive understanding of the taxonomic approaches for investigating this genus.
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Affiliation(s)
- Hyeon Shik Cho
- Department of Oceanography, Kyungpook National University, Daegu, Republic of Korea
| | - JunMo Lee
- Department of Oceanography, Kyungpook National University, Daegu, Republic of Korea
- Kyungpook Institute of Oceanography, Kyungpook National University, Daegu, Republic of Korea
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Eze CN, Onyejiaka CK, Ihim SA, Ayoka TO, Aduba CC, Ndukwe JK, Nwaiwu O, Onyeaka H. Bioactive compounds by microalgae and potentials for the management of some human disease conditions. AIMS Microbiol 2023; 9:55-74. [PMID: 36891530 PMCID: PMC9988413 DOI: 10.3934/microbiol.2023004] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Revised: 01/18/2023] [Accepted: 01/31/2023] [Indexed: 02/11/2023] Open
Abstract
Microalgae biomasses are excellent sources of diverse bioactive compounds such as lipids, polysaccharides, carotenoids, vitamins, phenolics and phycobiliproteins. Large-scale production of these bioactive substances would require microalgae cultivation either in open-culture systems or closed-culture systems. Some of these bioactive compounds (such as polysaccharides, phycobiliproteins and lipids) are produced during their active growth phase. They appear to have antibacterial, antifungal, antiviral, antioxidative, anticancer, neuroprotective and chemo-preventive activities. These properties confer on microalgae the potential for use in the treatment and/or management of several neurologic and cell dysfunction-related disease conditions, including Alzheimer's disease (AD), AIDS and COVID-19, as shown in this review. Although several health benefits have been highlighted, there appears to be a consensus in the literature that the field of microalgae is still fledgling, and more research needs to be carried out to ascertain the mechanisms of action that underpin the effectiveness of microalgal compounds. In this review, two biosynthetic pathways were modeled to help elucidate the mode of action of the bioactive compounds from microalgae and their products. These are carotenoid and phycobilin proteins biosynthetic pathways. The education of the public on the importance of microalgae backed with empirical scientific evidence will go a long way to ensure that the benefits from research investigations are quickly rolled out. The potential application of these microalgae to some human disease conditions was highlighted.
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Affiliation(s)
- Chijioke Nwoye Eze
- Department of Science Laboratory Technology, University of Nigeria Nsukka
| | | | - Stella Amarachi Ihim
- Department of Pharmacology and Toxicology, Faculty of Pharmaceutical, University of Nigeria Nsukka
| | | | | | - Johnson K Ndukwe
- Department of Microbiology, University of Nigeria Nsukka.,UNESCO International Centre for Biotechnology, University of Nigeria Nsukka
| | - Ogueri Nwaiwu
- School of Chemical Engineering, University of Birmingham, Edgbaston, Birmingham, B15 2TT, United Kingdom
| | - Helen Onyeaka
- School of Chemical Engineering, University of Birmingham, Edgbaston, Birmingham, B15 2TT, United Kingdom
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Ferreira de Oliveira AP, Bragotto APA. Microalgae-based products: Food and public health. FUTURE FOODS 2022. [DOI: 10.1016/j.fufo.2022.100157] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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Wang J, Zhang Q, Chen N, Chen J, Zhou J, Li J, Wei Y, Bu D. A new Desmodesmus sp. from the Tibetan Yamdrok Lake. PLoS One 2022; 17:e0275799. [PMID: 36206243 PMCID: PMC9544026 DOI: 10.1371/journal.pone.0275799] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Accepted: 09/23/2022] [Indexed: 11/19/2022] Open
Abstract
Revegetation of exposed sub-soil, while a desirable recovery strategy, often fails due to extreme soil chemical properties, such as low organic matter and pH levels. Microalgae play a key role in maintaining water quality in the lakes and rivers on the Qinghai-Tibet plateau. Plateau microalgae have extensive application prospects in environmental purification, biotechnology, medicine and cosmetics, food industry, and renewable energy. To identify the high biomass of microalgae present in nature, microalgae with the greatest biomass were screened from natural water samples through filtration, pre-culture, and plate scribing separation. Following identification via 18S rRNA sequencing as for the Desmodesmus sp., we constructed a neighbor-joining phylogenetic tree. The novel Desmodesmus sp. from the Tibetan Yamdrok Lake were identified through polyphasic taxonomy. Simultaneously, the sequence of the experimental samples and the target species were shown different following the identification and analysis of SNP and InDel loci. The light-absorbing properties of plateau Desmodesmus sp. have been investigated previously. The characteristic absorption peak of Desmodesmus sp. on the plateau was measured at 689 nm in the visible spectrum using full wavelength scanning with a UV-Vis spectrophotometer. For Desmodesmus sp. which is prone to settling in the process of amplification culture. By monitoring the change trend of total nitrogen, total phosphorus, pH and electrical conductivity in algae solution system, we determined that the logarithmic growth phase and the best transfer window of Desmodesmus sp. were at 15-20 days. This study can provide basic research methods for the study of microalgae in high altitude areas, and lay a foundation for the later study and application of microalgae.
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Affiliation(s)
- Jinhu Wang
- College of Science, Tibet University, Lhasa City, Tibet Autonomous Region, P. R. China
| | - Qiangying Zhang
- College of Science, Tibet University, Lhasa City, Tibet Autonomous Region, P. R. China
| | - Naijiang Chen
- Lianyungang Food and Drug Inspection and Testing Center, Lianyungang City, Jiangsu Province, P. R. China
| | - Junyu Chen
- College of Science, Tibet University, Lhasa City, Tibet Autonomous Region, P. R. China
| | - Jinna Zhou
- College of Science, Tibet University, Lhasa City, Tibet Autonomous Region, P. R. China
| | - Jing Li
- College of Science, Tibet University, Lhasa City, Tibet Autonomous Region, P. R. China
| | - Yanli Wei
- College of Science, Tibet University, Lhasa City, Tibet Autonomous Region, P. R. China
| | - Duo Bu
- College of Science, Tibet University, Lhasa City, Tibet Autonomous Region, P. R. China
- * E-mail:
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Rajput A, Singh DP, Khattar JS, Swatch GK, Singh Y. Evaluation of growth and carotenoid production by a green microalga Scenedesmus quadricauda PUMCC 4.1.40. under optimized culture conditions. J Basic Microbiol 2021; 62:1156-1166. [PMID: 34491598 DOI: 10.1002/jobm.202100285] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2021] [Revised: 08/24/2021] [Accepted: 08/28/2021] [Indexed: 01/03/2023]
Abstract
Microalgae are a potential source of a wide range of food and novel value-added products. The versatility of microalgae to produce different kind of pigments is gaining interest as a sustainable source of natural carotenoids. Currently, commercial production of carotenoids from selected microalgae requires special culture conditions which are difficult to maintain. The present study has been undertaken to optimize culture conditions for growth and carotenoid production by a new isolate Scenedesmus quadricauda PUMCC 4.1.40. The results revealed that test organism produced 1.54 mg dry biomass/ml with a content of 40 μg carotenoids/mg dry biomass during stationary phase. The growth and carotenoid production was increased by 2.4-fold under combined optimized culture conditions. The optimized conditions were growth medium, Chu-10; pH 8.5; temperature, 30°C; nitrogen, 20 mM nitrate; phosphate, 0.22 mM; NaCl, 0.42 mM and blue light. Separation and identification of four important carotenoids through high-performance thin-layer chromatography (HPTLC) followed by purification using flash chromatography and quantification by HPLC revealed 23.8, 19.0, 6.5, and 4.0 μg astaxanthin, β-carotene, lutein, and canthaxanthin /mg dry biomass, respectively. The amount of total carotenoids (98 μg/mg dry biomass) containing 40% valuable astaxanthin and β-carotene produced under optimized conditions was significantly higher than control cultures. This justifies that S. quadricauda is a promising candidate for scale-up production of carotenoid.
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Affiliation(s)
- Alka Rajput
- Department of Botany, Punjabi University, Patiala, Punjab, India
| | - Davinder P Singh
- Department of Botany, Punjabi University, Patiala, Punjab, India
| | | | - Gurdeep K Swatch
- Department of Botany, Punjabi University, Patiala, Punjab, India
| | - Yadvinder Singh
- Department of Botany and Environmental Science, Sri Guru Granth Sahib World University, Fatehgarh Sahib, Punjab, India
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Role of C/N ratio on microalgae growth in mixotrophy and incorporation of titanium nanoparticles for cell flocculation and lipid enhancement in economical biodiesel application. 3 Biotech 2020; 10:331. [PMID: 32656064 DOI: 10.1007/s13205-020-02323-0] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2019] [Accepted: 06/24/2020] [Indexed: 10/23/2022] Open
Abstract
Present study aimed to evaluate the influence of carbon/nitrogen ratio (C/N) on mixotrophic growth of microalgae and role of nanomaterial in cell recovery and lipid improvement. In this study, three microalgae species were isolated, screened from local freshwater body for lipid assimilation. The microalgae were identified as Chlorococcum sp., Scenedesmus sp., and Euglena sp. Mixotrophic cultivation of each microalgae strain using various organic carbon sources was preferred in contrast with photoautotrophic mode. Sucrose represented as the preeminent source for enhancing the microalgae biomass of 3.5 g/L and lipid content of 58.35%, which was a significant improvement as compared to control. Later, response surface methodology-central composite design (RSM-CCD), tool was employed to optimize the C/N ratio and demonstrated the maximum biomass production of 5.02 g/L along with the increased lipid content of 60.34%. Ti nanoparticles (Ti nps) were added to the culture for lipid enhancement in the stationary phase and biomass removal was performed by nanoparticle (np)-mediated flocculation technique. Optimized concentration of 15 ppm Ti nps determined the cell harvesting efficacy of 82.46% during 45 min of sedimentation time and 1.23-fold lipid enhancement was reported. Extracted lipid was converted to fatty acid methyl esters (FAME) by the process of transesterification and analyzed by gas chromatography-mass spectrometry (GC-MS). Characterization of FAME revealed the presence of 56.31% of saturated fatty acid (SFA) and 29.06% unsaturated fatty acids (UFA) that could be processed towards sustainable biodiesel production. Hence, our results suggested that integration of mixotrophic cultivation and Ti nps emerged as a new cost-effective approach for biomass and lipid enhancement in microalgae Chlorococcum sp.
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Singh DP, Khattar JS, Rajput A, Chaudhary R, Singh R. High production of carotenoids by the green microalga Asterarcys quadricellulare PUMCC 5.1.1 under optimized culture conditions. PLoS One 2019; 14:e0221930. [PMID: 31490970 PMCID: PMC6730905 DOI: 10.1371/journal.pone.0221930] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2018] [Accepted: 08/19/2019] [Indexed: 12/23/2022] Open
Abstract
Since carotenoids are important as natural colorants, antioxidants, neutraceutics and pharmaceutics, the aim of the present study was to find a new good source of these pigments. We hereby report a green microalga Asterarcys quadricellulare PUMCC 5.1.1 as a new and good producer of carotenoids. The organism produced 35±1.75 μg carotenoids mg-1 dry biomass during stationary phase in control cultures. The growth and carotenoids production by the test microalga were optimized by varying nutrient growth media, pH, nitrogen and phosphate source, salinity, light quality, intensity and duration. The optimized conditions for carotenoid production were: Bold basal (BB) medium with pH 8.5, containing with10 mM nitrate, 3.5 mM phosphate and 0.17 mM salinity and illuminated with blue light with 60 μmol m-2 s-1 photon flux light intensity. Cultivation of cultures in the above mentioned optimized conditions resulted in nearly 3.0 fold increase in carotenoid production compared to the control cultures grown in unmodified BB medium. Using HPTLC, four carotenoids have been identified as β-carotene, lutein, astaxanthin and canthaxanthin. Further, carotenoids were also separated and purified by flash chromatography and the amounts of purified carotenoids were determined by HPLC. The organism produced 47.0, 28.7, 15.5 and 14.0 μg β-carotene, lutein, astaxanthin and canthaxanthin mg-1 dry biomass, respectively, under optimized conditions. The amount of total carotenoids (118 μg mg-1 dry biomass) produced by Asterarcys quadricellulare PUMCC 5.1.1 under optimized culture conditions was significantly higher than control cultures. Thus, this microalgal strain is a promising candidate for carotenoid production at commercial level.
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Affiliation(s)
- Davinder Pal Singh
- Department of Botany, Punjabi University, Patiala, Punjab, India
- * E-mail:
| | | | - Alka Rajput
- Department of Botany, Punjabi University, Patiala, Punjab, India
| | - Rajni Chaudhary
- Department of Botany, Punjabi University, Patiala, Punjab, India
| | - Ramsarup Singh
- Department of Biotechnology, Punjabi University, Patiala, Punjab, India
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