1
|
Ruiz-Hernandez IH, Madrigal-Perez LA, Martinez-Flores HE, González-Hernández JC. Production of primary metabolites by Pseudomonas reptilivora B-6bs at the flask level using a full factorial experimental design. Arch Microbiol 2025; 207:22. [PMID: 39751832 DOI: 10.1007/s00203-024-04202-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2024] [Revised: 10/30/2024] [Accepted: 11/14/2024] [Indexed: 01/04/2025]
Abstract
The metabolites gluconic acid, 5-ketogluconic acid, proline, and glutamic acid, produced by Pseudomonas reptilivora B-6bs, are industrially important, particularly in food and pharmaceutical sectors. However, producing these metabolites involves biotin supplementation to enhance yields, which is an expensive additive, and reducing its use can significantly lower production costs. Thus, This study aimed to enhance the production of gluconic acid, 5-ketogluconic acid, proline, and glutamic acid without biotin supplementation. To achieve this, a full factorial design was employed, varying agitation speed, glucose concentration, and temperature to determine the optimal conditions for metabolite production. Metabolite concentration was measured using spectrophotometric analysis and thin-layer chromatography (TLC), and the results were statistically analyzed using Minitab® 18. The findings demonstrate that Pseudomonas reptilivora B-6bs effectively produce gluconic acid (50.51 ± 0.035 g/L, YP/S: 0.917 g/g) and 5-ketogluconic acid (44.46 ± 0.23 g/L, YP/S: 0.947 g/g), along with proline (0.1727 ± 0.00085 g/L, YP/S: 0.00004 g/g) and glutamic acid (0.853 ± 0.142 g/L, YP/S: 0.013 g/g) without biotin supplementation. Optimal production was observed with a glucose concentration of 55 g/L. These findings provide a viable biotin-independent strategy for high-value metabolite production. This study contributes novel insights into cost-effective production processes, making it relevant to industrial applications.
Collapse
Affiliation(s)
| | - Luis Alberto Madrigal-Perez
- Tecnológico Nacional de México, Instituto Tecnológico Superior de Ciudad Hidalgo, 61100, Ciudad Hidalgo, Mexico
| | - Héctor Eduardo Martinez-Flores
- Facultad de Químico Farmacobiología, Universidad Michoacana de San Nicolás de Hidalgo, 58240, Morelia, Michoacán, Mexico
| | | |
Collapse
|
2
|
Papadopoulou D, Chrysikopoulou V, Rampaouni A, Tsoupras A. Antioxidant and anti-inflammatory properties of water kefir microbiota and its bioactive metabolites for health promoting bio-functional products and applications. AIMS Microbiol 2024; 10:756-811. [PMID: 39628717 PMCID: PMC11609422 DOI: 10.3934/microbiol.2024034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2024] [Revised: 08/05/2024] [Accepted: 08/28/2024] [Indexed: 12/06/2024] Open
Abstract
Inflammation and oxidative stress are implicated in several chronic disorders, while healthy foods and especially fermented beverages and those containing probiotics can provide anti-inflammatory and antioxidant protection against such manifestations and the associated disorders. Water kefir is such a beverage that is rich in both probiotic microbiota and anti-inflammatory bioactives, with an increasing demand as an alternative to a fermented product based on non-dairy matrix with potential health properties. Within this study, the health-promoting properties of the most representative species and strains of microorganisms present in water kefir grains, as well as the health benefits attributed to the bioactive metabolites produced by each individual strain in a series of their cultures, were thoroughly reviewed. Emphasis was given to the antioxidant, antithrombotic, and anti-inflammatory bio-functionalities of both the cultured microorganisms and the bioactive metabolites produced in each case. Moreover, an extensive presentation of the antioxidant and anti-inflammatory health benefits observed from the overall water kefir cultures and classic water kefir beverages obtained were also conducted. Finally, the use of water kefir for the production of several other bio-functional products, including fermented functional foods, supplements, nutraceuticals, nutricosmetics, cosmeceuticals, and cosmetic applications with anti-inflammatory and antioxidant health promoting potential was also thoroughly discussed. Limitations and future perspectives on the use of water kefir, its microorganisms, and their bioactive metabolites are also outlined.
Collapse
Affiliation(s)
| | | | | | - Alexandros Tsoupras
- Hephaestus Laboratory, School of Chemistry, Faculty of Science, Democritus University of Thrace, Kavala University Campus, 65404, Kavala, Greece
| |
Collapse
|
3
|
New perspectives into Gluconobacter-catalysed biotransformations. Biotechnol Adv 2023; 65:108127. [PMID: 36924811 DOI: 10.1016/j.biotechadv.2023.108127] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Revised: 03/02/2023] [Accepted: 03/08/2023] [Indexed: 03/17/2023]
Abstract
Different from other aerobic microorganisms that oxidise carbon sources to water and carbon dioxide, Gluconobacter catalyses the incomplete oxidation of various substrates with regio- and stereoselectivity. This ability, as well as its capacity to release the resulting products into the reaction media, place Gluconobacter as a privileged member of a non-model microorganism class that may boost industrial biotechnology. Knowledge of new technologies applied to Gluconobacter has been piling up in recent years. Advancements in its genetic modification, application of immobilisation tools and careful designs of the transformations, have improved productivities and stabilities of Gluconobacter strains or enabled new bioconversions for the production of valuable marketable chemicals. In this work, the latest advancements applied to Gluconobacter-catalysed biotransformations are summarised with a special focus on recent available tools to improve them. From genetic and metabolic engineering to bioreactor design, the most recent works on the topic are analysed in depth to provide a comprehensive resource not only for scientists and technologists working on/with Gluconobacter, but for the general biotechnologist.
Collapse
|
4
|
Collin B, Auffan M, Doelsch E, Proux O, Kieffer I, Ortet P, Santaella C. Bacterial Metabolites and Particle Size Determine Cerium Oxide Nanomaterial Biotransformation. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022; 56:16838-16847. [PMID: 36350260 DOI: 10.1021/acs.est.2c05280] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Soil is a major receptor of manufactured nanomaterials (NMs) following unintentional releases or intentional uses. Ceria NMs have been shown to undergo biotransformation in plant and soil organisms with a partial Ce(IV) reduction into Ce(III), but the influence of environmentally widespread soil bacteria is poorly understood. We used high-energy resolution fluorescence-detected X-ray absorption spectroscopy (HERFD-XAS) with an unprecedented detection limit to assess Ce speciation in a model soil bacterium (Pseudomonas brassicacearum) exposed to CeO2 NMs of different sizes and shapes. The findings revealed that the CeO2 NM's size drives the biotransformation process. No biotransformation was observed for the 31 nm CeO2 NMs, contrary to 7 and 4 nm CeO2 NMs, with a Ce reduction of 64 ± 14% and 70 ± 15%, respectively. This major reduction appeared quickly, from the early exponential bacterial growth phase. Environmentally relevant organic acid metabolites secreted by Pseudomonas, especially in the rhizosphere, were investigated. The 2-keto-gluconic and citric acid metabolites alone were able to induce a significant reduction in 4 nm CeO2 NMs. The high biotransformation measured for <7 nm NMs would affect the fate of Ce in the soil and biota.
Collapse
Affiliation(s)
- Blanche Collin
- Aix Marseille Univ, CNRS, IRD, INRAE, Coll France, CEREGE, Aix-en-Provence, France
- Aix Marseille Univ, CEA, CNRS, BIAM, LEMIRE, Laboratory of Microbial Ecology of the Rhizosphere, ECCOREV FR 3098, F-13108 St-Paul-lez-Durance, France
| | - Mélanie Auffan
- Aix Marseille Univ, CNRS, IRD, INRAE, Coll France, CEREGE, Aix-en-Provence, France
| | - Emmanuel Doelsch
- CIRAD, UPR Recyclage et risque, F-34398 Montpellier, France
- Recyclage et risque, Univ Montpellier, CIRAD, Montpellier, France
| | - Olivier Proux
- BM30/CRG-FAME, ESRF, Université Grenoble Alpes, CNRS, IRSTEa, Météo France, IRD, OSUG, 38000 Grenoble, France
| | - Isabelle Kieffer
- BM30/CRG-FAME, ESRF, Université Grenoble Alpes, CNRS, IRSTEa, Météo France, IRD, OSUG, 38000 Grenoble, France
| | - Philippe Ortet
- Aix Marseille Univ, CEA, CNRS, BIAM, LEMIRE, Laboratory of Microbial Ecology of the Rhizosphere, ECCOREV FR 3098, F-13108 St-Paul-lez-Durance, France
| | - Catherine Santaella
- Aix Marseille Univ, CEA, CNRS, BIAM, LEMIRE, Laboratory of Microbial Ecology of the Rhizosphere, ECCOREV FR 3098, F-13108 St-Paul-lez-Durance, France
| |
Collapse
|
5
|
da Silva GAR, Oliveira SSDS, Lima SF, do Nascimento RP, Baptista ARDS, Fiaux SB. The industrial versatility of Gluconobacter oxydans: current applications and future perspectives. World J Microbiol Biotechnol 2022; 38:134. [PMID: 35688964 PMCID: PMC9187504 DOI: 10.1007/s11274-022-03310-8] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Accepted: 05/13/2022] [Indexed: 11/26/2022]
Abstract
Gluconobacter oxydans is a well-known acetic acid bacterium that has long been applied in the biotechnological industry. Its extraordinary capacity to oxidize a variety of sugars, polyols, and alcohols into acids, aldehydes, and ketones is advantageous for the production of valuable compounds. Relevant G. oxydans industrial applications are in the manufacture of L-ascorbic acid (vitamin C), miglitol, gluconic acid and its derivatives, and dihydroxyacetone. Increasing efforts on improving these processes have been made in the last few years, especially by applying metabolic engineering. Thereby, a series of genes have been targeted to construct powerful recombinant strains to be used in optimized fermentation. Furthermore, low-cost feedstocks, mostly agro-industrial wastes or byproducts, have been investigated, to reduce processing costs and improve the sustainability of G. oxydans bioprocess. Nonetheless, further research is required mainly to make these raw materials feasible at the industrial scale. The current shortage of suitable genetic tools for metabolic engineering modifications in G. oxydans is another challenge to be overcome. This paper aims to give an overview of the most relevant industrial G. oxydans processes and the current strategies developed for their improvement.
Collapse
Affiliation(s)
- Gabrielle Alves Ribeiro da Silva
- Graduate Program in Science and Biotechnology, Biology Institute, Fluminense Federal University (UFF), Niterói-RJ, 24020-141, Brazil.
- Microbial Technology Laboratory, Pharmaceutical Technology Department, Faculty of Pharmacy, Fluminense Federal University (UFF), Niterói-RJ, 24241-000, Brazil.
- Ecology of Microbial Process Laboratory, Biochemical Engineering Department, Chemical School, Technology Center, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro-RJ, 21941-909, Brazil.
| | - Simone Santos de Sousa Oliveira
- Graduate Program in Science and Biotechnology, Biology Institute, Fluminense Federal University (UFF), Niterói-RJ, 24020-141, Brazil
- Microbial Technology Laboratory, Pharmaceutical Technology Department, Faculty of Pharmacy, Fluminense Federal University (UFF), Niterói-RJ, 24241-000, Brazil
| | - Sara Fernandes Lima
- Microbial Technology Laboratory, Pharmaceutical Technology Department, Faculty of Pharmacy, Fluminense Federal University (UFF), Niterói-RJ, 24241-000, Brazil
| | - Rodrigo Pires do Nascimento
- Ecology of Microbial Process Laboratory, Biochemical Engineering Department, Chemical School, Technology Center, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro-RJ, 21941-909, Brazil
| | - Andrea Regina de Souza Baptista
- Center for Microorganisms Investigation, Microbiology and Parasitology Department, Biomedical Institute, Fluminense Federal University (UFF), Niterói-RJ, 24020-141, Brazil
| | - Sorele Batista Fiaux
- Microbial Technology Laboratory, Pharmaceutical Technology Department, Faculty of Pharmacy, Fluminense Federal University (UFF), Niterói-RJ, 24241-000, Brazil
| |
Collapse
|
6
|
Sun L, Wang D, Sun W, Zhang X, Cui F, Su C, Zhang X, Xu G, Shi J, Xu Z. Characterization of a transcriptional regulator PtxS from Pseudomonas plecoglossicida for regulating 2-ketogluconic acid metabolism. Int J Biol Macromol 2021; 174:330-338. [PMID: 33529626 DOI: 10.1016/j.ijbiomac.2021.01.198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Revised: 01/25/2021] [Accepted: 01/28/2021] [Indexed: 11/19/2022]
Abstract
Homologs of PtxS are ubiquitous transcriptional regulators controlling the expression of the glucose dehydrogenase and kgu operon to globally regulate the 2-ketogluconic acid (2KGA) metabolism in Pseudomonas. In the present study, a PtxS from a 2KGA industrial producer Pseudomonas plecoglossicida JUIM01 (PpPtxS) was heterologously expressed in E. coli BL21(DE3), then structurally and functionally characterized. The obtained results showed that PpPtxS was a 36.65-kDa LacI-family transcriptional regulator. 2KGA was the sole effector of PpPtxS. Glucose negatively affected the molecular binding of PpPtxS and 2KGA, and gluconic acid inhibited the PpPtxS-2KGA binding reaction. PpPtxS in water solution mainly existed as a dimer and bound to two molecules of 2KGA. The effector 2KGA mainly bound to the region close to the C-terminal of PpPtxS by interacting with the 299th to the 301st amino acids (Ala, Gln, Pro, Thr, Glu and Arg). PpPtxS specifically recognized and bound to a 14-bp palindrome sequence (5'-TGAAACCGGTTTCA-3') due to its conserved HTH motif at the N-terminal. The characterization of PpPtxS in this study would provide a theoretical guidance for the industrial production of 2KGA.
Collapse
Affiliation(s)
- Lei Sun
- The Key Laboratory of Industrial Biotechnology, National Engineering Laboratory for Cereal Fermentation Technology, School of Biotechnology, Jiangnan University, Ministry of Education, Wuxi 214122, PR China
| | - Daming Wang
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, PR China
| | - Wenjing Sun
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, PR China; Parchn Sodium Isovitamin C Co. Ltd, Dexing 334221, PR China.
| | - Xiaofei Zhang
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, PR China
| | - Fengjie Cui
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, PR China; Parchn Sodium Isovitamin C Co. Ltd, Dexing 334221, PR China
| | - Chang Su
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, Wuxi 214122, PR China
| | - Xiaomei Zhang
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, Wuxi 214122, PR China
| | - Guoqiang Xu
- The Key Laboratory of Industrial Biotechnology, National Engineering Laboratory for Cereal Fermentation Technology, School of Biotechnology, Jiangnan University, Ministry of Education, Wuxi 214122, PR China
| | - Jinsong Shi
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, Wuxi 214122, PR China
| | - Zhenghong Xu
- The Key Laboratory of Industrial Biotechnology, National Engineering Laboratory for Cereal Fermentation Technology, School of Biotechnology, Jiangnan University, Ministry of Education, Wuxi 214122, PR China.
| |
Collapse
|
7
|
Sun L, Wang D, Sun W, He X, Cui F, Zhang X, Gong J, Shi J, Xu Z. A 2-ketogluconate kinase KguK in Pseudomonas plecoglossicida JUIM01: Enzymatic characterization and its role in 2-keto-d-gluconic acid metabolism. Int J Biol Macromol 2020; 165:2640-2648. [DOI: 10.1016/j.ijbiomac.2020.10.169] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Revised: 10/17/2020] [Accepted: 10/21/2020] [Indexed: 12/12/2022]
|