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Adam SM, Wijeratne GB, Rogler PJ, Diaz DE, Quist DA, Liu JJ, Karlin KD. Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function. Chem Rev 2018; 118:10840-11022. [PMID: 30372042 PMCID: PMC6360144 DOI: 10.1021/acs.chemrev.8b00074] [Citation(s) in RCA: 164] [Impact Index Per Article: 23.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Heme-copper oxidases (HCOs) are terminal enzymes on the mitochondrial or bacterial respiratory electron transport chain, which utilize a unique heterobinuclear active site to catalyze the 4H+/4e- reduction of dioxygen to water. This process involves a proton-coupled electron transfer (PCET) from a tyrosine (phenolic) residue and additional redox events coupled to transmembrane proton pumping and ATP synthesis. Given that HCOs are large, complex, membrane-bound enzymes, bioinspired synthetic model chemistry is a promising approach to better understand heme-Cu-mediated dioxygen reduction, including the details of proton and electron movements. This review encompasses important aspects of heme-O2 and copper-O2 (bio)chemistries as they relate to the design and interpretation of small molecule model systems and provides perspectives from fundamental coordination chemistry, which can be applied to the understanding of HCO activity. We focus on recent advancements from studies of heme-Cu models, evaluating experimental and computational results, which highlight important fundamental structure-function relationships. Finally, we provide an outlook for future potential contributions from synthetic inorganic chemistry and discuss their implications with relevance to biological O2-reduction.
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Affiliation(s)
- Suzanne M. Adam
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Gayan B. Wijeratne
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Patrick J. Rogler
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Daniel E. Diaz
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - David A. Quist
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Jeffrey J. Liu
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Kenneth D. Karlin
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
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Aygun Z, Aygun M. Spectroscopic analysis of Ahlat stone (ignimbrite) and pumice formed by volcanic activity. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2016; 166:73-78. [PMID: 27214271 DOI: 10.1016/j.saa.2016.05.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2015] [Revised: 05/13/2016] [Accepted: 05/15/2016] [Indexed: 06/05/2023]
Abstract
Natural materials such as ignimbrites are preferred commonly not only in historical places but also in houses or in different kind of buildings all over the world especially around Ahlat in Bitlis-Turkey. Durability, lightness and good-insulation are the significative properties of these stones. Also, pumice is an another preferred material because of its advantages in construction industry. In this paper, four kinds of ignimbrite (light-yellow, yellow, black and white) and pumice from Ahlat region have been investigated by EPR method to determine magnetic properties of them. The results obtained by EPR, EDS and XRD methods are evaluated together. SEM technique is also used to understand the surface morphology of the samples.
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Affiliation(s)
- Z Aygun
- Bitlis Eren University, Vocational School of Technical Sciences, Bitlis, Turkey.
| | - M Aygun
- Bitlis Eren University, Faculty of Arts and Science, Physics Department, Bitlis, Turkey.
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Oszajca M, Franke A, Brindell M, Stochel G, van Eldik R. Redox cycling in the activation of peroxides by iron porphyrin and manganese complexes. ‘Catching’ catalytic active intermediates. Coord Chem Rev 2016. [DOI: 10.1016/j.ccr.2015.01.013] [Citation(s) in RCA: 56] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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Franke A, Fertinger C, van Eldik R. Axial Ligand and Spin-State Influence on the Formation and Reactivity of Hydroperoxo-Iron(III) Porphyrin Complexes. Chemistry 2012; 18:6935-49. [DOI: 10.1002/chem.201103036] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2011] [Revised: 12/29/2011] [Indexed: 11/12/2022]
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5
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Kataoka S, Yasui H, Hiromura M, Sakurai H. Effect of insulin-mimetic vanadyl sulfate on cytochrome P450 2E1-dependent p-nitrophenol hydroxylation in the liver microsomes of streptozotocin-induced type 1 diabetic rats. Life Sci 2005; 77:2814-29. [PMID: 15964029 DOI: 10.1016/j.lfs.2005.05.029] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2004] [Accepted: 05/05/2005] [Indexed: 11/16/2022]
Abstract
CYP2E1 is known to be induced in streptozotocin (STZ)-treated diabetic rats (STZ rats), and its induction is improved by insulin. We have examined the age-dependent changes of CYP2E1 in the liver microsomes of type 1 diabetic STZ rats, the effects of VOSO4 on the contents of total P450 and CYP2E1, and the activities of CYP2E1 in terms of p-nitrophenol hydroxylation. The contents of P450 and CYP2E1 and CYP2E1 activity were enhanced with the development of diabetes. When the hyperglycemia of STZ rats was improved by daily intraperitoneal injections of VOSO4 for 10 days at the doses of 7 mg/kg body weight for 5 days, 5 mg/kg for the following 3 days, and then 2.5 mg/kg for 2 days, the P450 and CYP2E1 levels and CYP2E1 activity were lowered than those in the untreated STZ rats. To understand the mechanism underlying CYP2E1-dependent hydroxylation activity, the production of reactive oxygen species was examined in the NADPH-liver microsomal systems by ESR spin-trapping. Singlet oxygen (1O2) was detected in all microsomal systems, while superoxide anion radical(*O2-) and hydroxyl radical (*OH) were not. On the basis of these results, we conclude that (1) CYP2E1 level and activity are enhanced in the diabetic state, however, they are improved by VOSO4 treatment, and (2) 1O2 is generated during CYP2E1-dependent substrate oxygenation.
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Affiliation(s)
- Sayuri Kataoka
- Department of Analytical and Bioinorganic Chemistry, Kyoto Pharmaceutical University, Yamashina-ku, Kyoto 607-8414, Japan
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Denisov IG, Makris TM, Sligar SG, Schlichting I. Structure and Chemistry of Cytochrome P450. Chem Rev 2005; 105:2253-77. [PMID: 15941214 DOI: 10.1021/cr0307143] [Citation(s) in RCA: 1568] [Impact Index Per Article: 78.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Ilia G Denisov
- Department of Biochemistry, Center for Biophysics and Computational Biology, University of Illinois, Urbana-Champaign, 61801, USA
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7
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Rivera M, Caignan GA, Astashkin AV, Raitsimring AM, Shokhireva TK, Walker FA. Models of the low-spin iron(III) hydroperoxide intermediate of heme oxygenase: magnetic resonance evidence for thermodynamic stabilization of the d(xy) electronic state at ambient temperatures. J Am Chem Soc 2002; 124:6077-89. [PMID: 12022842 DOI: 10.1021/ja017334o] [Citation(s) in RCA: 76] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The (13)C pulsed ENDOR and NMR study of [meso-(13)C-TPPFe(OCH(3))(OO(t)Bu)](-) performed in this work shows that although the unpaired electron in low-spin ferrihemes containing a ROO(-) ligand resides in a d(pi) orbital at 8 K, the d(xy) electron configuration is favored at physiological temperatures. The variable temperature NMR spectra indicate a dynamic situation in which a heme with a d(pi) electron configuration and planar porphyrinate ring is in equilibrium with a d(xy) electron configuration that has a ruffled porphyrin ring. Because of the similarity in the EPR spectra of the hydroperoxide complexes of heme oxygenase, cytochrome P450, and the model heme complex reported herein, it is possible that these two electron configurations and ring conformations may also exist in equilibrium in the enzymatic systems. The ruffled porphyrinate ring would aid the attack of the terminal oxygen of the hydroperoxide intermediate of heme oxygenase (HO) on the meso-carbon, and the large spin density at the meso-carbons of a d(xy) electron configuration heme suggests the possibility of a radical mechanism for HO. The dynamic equilibrium between the ruffled (d(xy)) and planar (d(pi)) conformers observed in the model complexes also suggests that a flexible heme binding cavity may be an important structural motif for heme oxygenase activity.
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Affiliation(s)
- Mario Rivera
- Department of Chemistry, Oklahoma State University, Stillwater, Oklahoma 74078-3071, USA.
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Tajima K, Tada K, Jinno J, Edo T, Mano H, Azuma N, Makino K. Mechanisms for the formation of six-coordinate Fe(III)TPP-peroxide complexes studied by simultaneous ESR and optical measurements. Inorganica Chim Acta 1997. [DOI: 10.1016/s0020-1693(96)05131-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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9
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Tajima K, Mikami K, Tada K, Oka S, Ishizu K, Ohya-Nishiguchi H. Autoreduction of a six-coordinate Fe(III)TPP-peroxide complex by heterolytic ironoxygen bond cleavage. Inorganica Chim Acta 1992. [DOI: 10.1016/s0020-1693(00)85823-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Jinno J, Shigematsu M, Tajima K, Sakurai H, Ohya-Nishiguchi H, Ishizu K. Coordination structure and chemical reactivity of hemoprotein-butyl peroxide complex. Biochem Biophys Res Commun 1991; 176:675-81. [PMID: 1850999 DOI: 10.1016/s0006-291x(05)80237-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
ESR and optical spectra ascribed to be the hemoprotein-butylperoxide complex were detected for the frozen aqueous solution containing whale met-Mb and t- or n-butylhydroperoxide at pH 10. The observed ESR and optical parameters of the complex were characteristic to those of six coordinate ferric low-spin complexes, having the butylperoxide anion at the axial position of heme. pH dependent ESR measurements demonstrated the formation of the complex in the biological pH regions (7.0). Time dependent ESR and optical measurements indicated that the complex may be one of the intermediate species in the processes of heme degradation reaction induced by butylperoxide.
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Affiliation(s)
- J Jinno
- Research Institute, Ohtsuka Pharmaceutical Co., Ltd., Tokushima, Japan
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11
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Structure and Reactivity of Fe(III)TPP-Oxygen-Skatole Ternary Complex in Tryptophan Dioxygenase Model Reaction System. ACTA ACUST UNITED AC 1991. [DOI: 10.1016/s0167-2991(08)62863-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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12
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Tajima K, Yoshino M, Mikami K, Edo T, Ishizu K, Ohya-Nishiguchi H. Important role of Fe(III)TPP-oxygen-skatole ternary complex in tryptophan dioxygenase model reaction system. Inorganica Chim Acta 1990. [DOI: 10.1016/s0020-1693(00)80454-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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13
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Tajima K. Formation of hemoprotein-alkylperoxide complexes demonstrated by ESR and optical absorption spectroscopy. Inorganica Chim Acta 1990. [DOI: 10.1016/s0020-1693(00)80520-4] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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14
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Tajima K, Shigematsu M, Jinno J, Kawano Y, Mikami K, Ishizu K, Ohya-Nishiguchi H, Shigamatsu M. A possible model of hemoprotein-fatty acid peroxide complex demonstrated by electron spin resonance. Biochem Biophys Res Commun 1990; 166:924-30. [PMID: 2154224 DOI: 10.1016/0006-291x(90)90899-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Coordination reaction between linolenic-acid-hydroperoxide (LHPO) and chloro(5, 10, 15, 20-tetraphenyl)-porphyrinato iron (III), Fe(III)TPPCl, was investigated by means of ESR. ESR spectra of the ferric low-spin complex (g1 = 2.336, g2 = 2.174 and g3 = 1.929) was recorded for the mixture prepared by mixing Fe(III)TPPCl and LHPO at -78 degrees C in the presence of alkaline reagent. ESR line width of complex was broadened when 17O2 labeled LHPO was used for ESR measurement. In terms of the g-parameters of the ferric low-spin species, this complex was concluded to be Fe(III)TPP(-OCH3)(-OO-linolenic acid) type complex.
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Affiliation(s)
- K Tajima
- Department of Chemistry, Faculty of Science, Ehime University, Matsuyama, Japan
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Abstract
Hemoproteins catalyze reductive and oxidative one-electron transformations. Not infrequently, the radicals produced by these one-electron reactions add to the prosthetic heme group of the enzyme and modify or terminate its catalytic function. Reactions of the radicals with the heme group include additions to the iron atom, pyrrole nitrogens, pyrrole carbons, vinyl groups, and meso carbons. The radicals involved in these reactions derive from the oxidizing agent, the substrate, or the amino acid residues of the catalytic site. The mechanism by which the radicals are generated, their steric and electronic properties, and the extent to which they have access to the heme group determine the nature and regiospecificity of the reaction. The reaction of heme prosthetic groups with radicals is relevant to the inhibition of hemoprotein enzymes, the normal and pathological degradation of heme, and our understanding of hemoprotein function.
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Affiliation(s)
- P R Ortiz de Montellano
- Department of Pharmaceutical Chemistry, School of Pharmacy, University of California, San Francisco 94143-0446
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17
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Sakurai H, Tsuchiya K, Fujita Y, Okada K. Dating of human blood by electron spin resonance spectroscopy. THE SCIENCE OF NATURE - NATURWISSENSCHAFTEN 1989; 76:24-5. [PMID: 2539566 DOI: 10.1007/bf00368306] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- H Sakurai
- Faculty of Pharmaceutical Sciences, University of Tokushima, Japan
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18
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Kohno M. Reactions of Cobalt Complexes of 5,10,15,20-Tetraphenylporphyrin with Peroxide Radicals Generated from Organic Peroxides and Unsaturated Fatty Acids. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1988. [DOI: 10.1246/bcsj.61.1509] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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