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Purchase R, Völker S. Spectral hole burning: examples from photosynthesis. PHOTOSYNTHESIS RESEARCH 2009; 101:245-66. [PMID: 19714478 PMCID: PMC2744831 DOI: 10.1007/s11120-009-9484-5] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2009] [Accepted: 07/31/2009] [Indexed: 05/14/2023]
Abstract
The optical spectra of photosynthetic pigment-protein complexes usually show broad absorption bands, often consisting of a number of overlapping, "hidden" bands belonging to different species. Spectral hole burning is an ideal technique to unravel the optical and dynamic properties of such hidden species. Here, the principles of spectral hole burning (HB) and the experimental set-up used in its continuous wave (CW) and time-resolved versions are described. Examples from photosynthesis studied with hole burning, obtained in our laboratory, are then presented. These examples have been classified into three groups according to the parameters that were measured: (1) hole widths as a function of temperature, (2) hole widths as a function of delay time and (3) hole depths as a function of wavelength. Two examples from light-harvesting (LH) 2 complexes of purple bacteria are given within the first group: (a) the determination of energy-transfer times from the chromophores in the B800 ring to the B850 ring, and (b) optical dephasing in the B850 absorption band. One example from photosystem II (PSII) sub-core complexes of higher plants is given within the second group: it shows that the size of the complex determines the amount of spectral diffusion measured. Within the third group, two examples from (green) plants and purple bacteria have been chosen for: (a) the identification of "traps" for energy transfer in PSII sub-core complexes of green plants, and (b) the uncovering of the lowest k = 0 exciton-state distribution within the B850 band of LH2 complexes of purple bacteria. The results prove the potential of spectral hole burning measurements for getting quantitative insight into dynamic processes in photosynthetic systems at low temperature, in particular, when individual bands are hidden within broad absorption bands. Because of its high-resolution wavelength selectivity, HB is a technique that is complementary to ultrafast pump-probe methods. In this review, we have provided an extensive bibliography for the benefit of scientists who plan to make use of this valuable technique in their future research.
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Affiliation(s)
- Robin Purchase
- Huygens and Gorlaeus Laboratories, Leiden University, 2300 RA Leiden, The Netherlands
| | - Silvia Völker
- Huygens and Gorlaeus Laboratories, Leiden University, 2300 RA Leiden, The Netherlands
- Department of Biophysics, Faculty of Exact Sciences, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands
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Lock AJ, Creemers TMH, Völker S. Spectral diffusion in glasses under high pressure: A study by time-resolved hole-burning. J Chem Phys 1999. [DOI: 10.1063/1.478649] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Nishiyama S, Machida S, Yamashita T, Horie K. Persistent Spectral Hole Burning of Phenoxazine and Phenothiazine Derivatives in Poly(vinyl alcohol) and the Effect of the Addition ofN,N,N′,N′-Tetramethyl-p-phenylenediamine. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1998. [DOI: 10.1246/bcsj.71.1731] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Nishiyama S, Machida S, Yamashita T, Horie K. Persistent Spectral Hole Burning of Resazurin and Resorufin in Poly(methyl methacrylate) in the Presence and Absence of N,N,N‘,N‘-Tetramethyl-p-phenylenediamine. J Phys Chem B 1998. [DOI: 10.1021/jp972714a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Satoko Nishiyama
- Department of Chemistry and Biotechnology, Graduate School of Engineering, the University of Tokyo, Hongo 7-3-1, Bunkyo-ku, Tokyo 113, Japan
| | - Shinjiro Machida
- Department of Chemistry and Biotechnology, Graduate School of Engineering, the University of Tokyo, Hongo 7-3-1, Bunkyo-ku, Tokyo 113, Japan
| | - Takashi Yamashita
- Department of Chemistry and Biotechnology, Graduate School of Engineering, the University of Tokyo, Hongo 7-3-1, Bunkyo-ku, Tokyo 113, Japan
| | - Kazuyuki Horie
- Department of Chemistry and Biotechnology, Graduate School of Engineering, the University of Tokyo, Hongo 7-3-1, Bunkyo-ku, Tokyo 113, Japan
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Temperature dependence of electron-vibronic spectra of photosynthetic systems. Computer simulations and comparison with experiment. Chem Phys 1995. [DOI: 10.1016/0301-0104(95)00073-w] [Citation(s) in RCA: 63] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Drobizhev M, Sapozhnikov M. A relationship between the kinetics of persistent spectral hole burning and its mechanism. Experiments with porphyrin dications. Chem Phys Lett 1995. [DOI: 10.1016/0009-2614(95)00234-u] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Jankowiak R, Small GJ. Spectral diffusion of molecular electronic transitions in amorphous solids: Weak and strong two-level-system phonon coupling. PHYSICAL REVIEW. B, CONDENSED MATTER 1993; 47:14805-14812. [PMID: 10005854 DOI: 10.1103/physrevb.47.14805] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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Kikas J, Schellenberg P, Friedrich J. Temperature broadening of impurity transitions in the crystalline and glassy phase of benzophenone. Chem Phys Lett 1993. [DOI: 10.1016/0009-2614(93)87005-n] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Wannemacher R, Koedijk J, Völker S. Spectral diffusion in organic glasses. Temperature dependence of permanent and transient holes. Chem Phys Lett 1993. [DOI: 10.1016/0009-2614(93)85507-k] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Dian J, Adamec F, Ambrož M, Pšenčik J, Vácha M, Hála J. Low temperature optical spectroscopy of natural porphyrins. J Mol Struct 1993. [DOI: 10.1016/0022-2860(93)80043-u] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Hiroike E, Fujimura Y. Dephasing effects on ultrafast transient hole-burning of nonpolar solute and solvent molecules. Chem Phys Lett 1993. [DOI: 10.1016/0009-2614(93)85098-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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12
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Sauter B, Bräuchle C. Efficient persistent spectral hole-burning of free-base octaethylporphine adsorbed on γ-alumina between 1.6 and 90 K. Chem Phys Lett 1992. [DOI: 10.1016/0009-2614(92)85473-n] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Littau KA, Dugan MA, Chen S, Fayer MD. Dynamics in a low‐temperature glass: Fast generation and detection of optical holes. J Chem Phys 1992. [DOI: 10.1063/1.461902] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Spectral diffusion in organic glasses measured by transient hole recovery kinetics on a time scale 1–500 ms. Chem Phys Lett 1991. [DOI: 10.1016/0009-2614(91)90217-w] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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15
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van der Zaag P, Schokker B, Völker S. Optical dephasing of organic glassy systems studied by hole-burning: relation with excited-state lifetimes. Chem Phys Lett 1991. [DOI: 10.1016/0009-2614(91)85138-m] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Thermal history and temperature-dependent photon echo and hole burning linewidths in low temperature glycerol glasses. Chem Phys Lett 1990. [DOI: 10.1016/0009-2614(90)85534-j] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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van der Laan H, Schmidt T, Visschers R, Visscher K, van Grondelle R, Völker S. Energy transfer in the B800–850 antenna complex of purple bacteria Rhodobacter sphaeroides: A study by spectral hole-burning. Chem Phys Lett 1990. [DOI: 10.1016/0009-2614(90)87121-7] [Citation(s) in RCA: 73] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Osad'ko I, Soldatov S. Non-Lorentzian wings of homogeneous zero-phonon lines: Manifestation in power broadening of holes. Chem Phys Lett 1990. [DOI: 10.1016/s0009-2614(90)87031-l] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Littau KA, Bai YS, Fayer MD. Two‐level systems and low‐temperature glass dynamics: Spectral diffusion and thermal reversibility of hole‐burning linewidths. J Chem Phys 1990. [DOI: 10.1063/1.457773] [Citation(s) in RCA: 58] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Osad'ko I. Density matrix approach to optical dephasing in solids: Nonperturbative theory for dephasing processes. Chem Phys Lett 1990. [DOI: 10.1016/0009-2614(90)85022-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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21
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van der Zaag P, Galaup J, Völker S. In search of spectral diffusion in glasses. A time-resolved transient hole-burning study of porphins in polyethylene. Chem Phys Lett 1990. [DOI: 10.1016/0009-2614(90)80027-b] [Citation(s) in RCA: 33] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Root LJ, Stillinger FH. Molecular-dynamics computer simulation applied to nonphotochemical hole-burning processes: Resorufin in glycerol. PHYSICAL REVIEW. B, CONDENSED MATTER 1990; 41:2348-2358. [PMID: 9993971 DOI: 10.1103/physrevb.41.2348] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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Hirschmann R, Friedrich J. A hole burning study of excitonic states of chain molecules in glasses. J Chem Phys 1989. [DOI: 10.1063/1.457217] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Spectral Hole-Burning in Crystalline and Amorphous Organic Solids. Optical Relaxation Processes at Low Temperature. RELAXATION PROCESSES IN MOLECULAR EXCITED STATES 1989. [DOI: 10.1007/978-94-009-0863-5_4] [Citation(s) in RCA: 31] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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27
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Van den berg R, Völker S. Site-selection spectroscopy and hole-burning of ionic dyes in amorphous hosts at low temperature. Chem Phys 1988. [DOI: 10.1016/0301-0104(88)85075-4] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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28
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Persistent infrared spectral hole burning of the sulfur—hydrogen vibrational mode in hydrogenated As2S3 glass. Chem Phys Lett 1988. [DOI: 10.1016/0009-2614(88)85228-x] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Optical dephasing and high-resolution spectroscopy of Eu3+ in organic glasses and polymers between 0.3 and 4.2 K. Chem Phys Lett 1988. [DOI: 10.1016/0009-2614(88)87236-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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