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Arlyapov VA, Plekhanova YV, Kamanina OA, Nakamura H, Reshetilov AN. Microbial Biosensors for Rapid Determination of Biochemical Oxygen Demand: Approaches, Tendencies and Development Prospects. BIOSENSORS 2022; 12:842. [PMID: 36290979 PMCID: PMC9599453 DOI: 10.3390/bios12100842] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2022] [Revised: 09/23/2022] [Accepted: 10/01/2022] [Indexed: 06/16/2023]
Abstract
One of the main indices of the quality of water is the biochemical oxygen demand (BOD). A little over 40 years have passed since the practical application of the first microbial sensor for the determination of BOD, presented by the Japanese professor Isao Karube. This time span has brought new knowledge to and practical developments in the use of a wide range of microbial cells based on BOD biosensors. At present, this field of biotechnology is becoming an independent discipline. The traditional BOD analysis (BOD5) has not changed over many years; it takes no less than 5 days to carry out. Microbial biosensors can be used as an alternative technique for assessing the BOD attract attention because they can reduce hundredfold the time required to measure it. The review examines the experience of the creation and practical application of BOD biosensors accumulated by the international community. Special attention is paid to the use of multiple cell immobilization methods, signal registration techniques, mediators and cell consortia contained in the bioreceptor. We consider the use of nanomaterials in the modification of analytical devices developed for BOD evaluation and discuss the prospects of developing new practically important biosensor models.
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Affiliation(s)
- Vyacheslav A. Arlyapov
- Laboratory of Biologically Active Compounds and Biocomposites, Federal State Budgetary Educational Establishment of Higher Education “Tula State University”, 300012 Tula, Russia
| | - Yulia V. Plekhanova
- Pushchino Center for Biological Research of the Russian Academy of Sciences, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 142290 Pushchino, Russia
| | - Olga A. Kamanina
- Laboratory of Biologically Active Compounds and Biocomposites, Federal State Budgetary Educational Establishment of Higher Education “Tula State University”, 300012 Tula, Russia
| | - Hideaki Nakamura
- Department of Liberal Arts, Tokyo University of Technology, 1404-1 Katakura, Hachioji, Tokyo 192-0982, Japan
| | - Anatoly N. Reshetilov
- Pushchino Center for Biological Research of the Russian Academy of Sciences, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 142290 Pushchino, Russia
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Martin-Yken H. Yeast-Based Biosensors: Current Applications and New Developments. BIOSENSORS 2020; 10:E51. [PMID: 32413968 PMCID: PMC7277604 DOI: 10.3390/bios10050051] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/01/2020] [Revised: 04/17/2020] [Accepted: 04/20/2020] [Indexed: 12/23/2022]
Abstract
Biosensors are regarded as a powerful tool to detect and monitor environmental contaminants, toxins, and, more generally, organic or chemical markers of potential threats to human health. They are basically composed of a sensor part made up of either live cells or biological active molecules coupled to a transducer/reporter technological element. Whole-cells biosensors may be based on animal tissues, bacteria, or eukaryotic microorganisms such as yeasts and microalgae. Although very resistant to adverse environmental conditions, yeasts can sense and respond to a wide variety of stimuli. As eukaryotes, they also constitute excellent cellular models to detect chemicals and organic contaminants that are harmful to animals. For these reasons, combined with their ease of culture and genetic modification, yeasts have been commonly used as biological elements of biosensors since the 1970s. This review aims first at giving a survey on the different types of yeast-based biosensors developed for the environmental and medical domains. We then present the technological developments currently undertaken by academic and corporate scientists to further drive yeasts biosensors into a new era where the biological element is optimized in a tailor-made fashion by in silico design and where the output signals can be recorded or followed on a smartphone.
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Affiliation(s)
- Helene Martin-Yken
- Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), UMR 792 Toulouse Biotechnology Institute (TBI), 31400 Toulouse, France; ; Tel.: +689-89-52-31-88
- Institut de Recherche pour le Développement (IRD), Faa’a, 98702 Tahiti, French Polynesia
- Unite Mixte de Recherche n°241 Ecosystemes Insulaires et Oceaniens, Université de la Polynésie Française, Faa’a, 98702 Tahiti, French Polynesia
- Laboratoire de Recherche sur les Biotoxines Marines, Institut Louis Malardé, Papeete, 98713 Tahiti, French Polynesia
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Nakamura H. Current status of water environment and their microbial biosensor techniques - Part II: Recent trends in microbial biosensor development. Anal Bioanal Chem 2018; 410:3967-3989. [PMID: 29736704 DOI: 10.1007/s00216-018-1080-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2018] [Revised: 04/07/2018] [Accepted: 04/12/2018] [Indexed: 12/20/2022]
Abstract
In Part I of the present review series, I presented the current state of the water environment by focusing on Japanese cases and discussed the need to further develop microbial biosensor technologies for the actual water environment. I comprehensively present trends after approximately 2010 in microbial biosensor development for the water environment. In the first section, after briefly summarizing historical studies, recent studies on microbial biosensor principles are introduced. In the second section, recent application studies for the water environment are also introduced. Finally, I conclude the present review series by describing the need to further develop microbial biosensor technologies. Graphical abstract Current water pollution indirectly occurs by anthropogenic eutrophication (Part I). Recent trends in microbial biosensor development for water environment are described in part II of the present review series.
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Affiliation(s)
- Hideaki Nakamura
- Department of Liberal Arts, Tokyo University of Technology, 1404-1 Katakura, Hachioji, Tokyo, 192-0982, Japan.
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Li Y, Sun J, Wang J, Bian C, Tong J, Li Y, Xia S. A microbial electrode based on the co-electrodeposition of carboxyl graphene and Au nanoparticles for BOD rapid detection. Biochem Eng J 2017. [DOI: 10.1016/j.bej.2017.03.015] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Wang J, Li Y, Bian C, Tong J, Fang Y, Xia S. Ultramicroelectrode array modified with magnetically labeled Bacillus subtilis, palladium nanoparticles and reduced carboxy graphene for amperometric determination of biochemical oxygen demand. Mikrochim Acta 2016. [DOI: 10.1007/s00604-016-2055-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Jouanneau S, Recoules L, Durand MJ, Boukabache A, Picot V, Primault Y, Lakel A, Sengelin M, Barillon B, Thouand G. Methods for assessing biochemical oxygen demand (BOD): a review. WATER RESEARCH 2014; 49:62-82. [PMID: 24316182 DOI: 10.1016/j.watres.2013.10.066] [Citation(s) in RCA: 133] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2013] [Revised: 10/21/2013] [Accepted: 10/25/2013] [Indexed: 05/13/2023]
Abstract
The Biochemical Oxygen Demand (BOD) is one of the most widely used criteria for water quality assessment. It provides information about the ready biodegradable fraction of the organic load in water. However, this analytical method is time-consuming (generally 5 days, BOD5), and the results may vary according to the laboratory (20%), primarily due to fluctuations in the microbial diversity of the inoculum used. Work performed during the two last decades has resulted in several technologies that are less time-consuming and more reliable. This review is devoted to the analysis of the technical features of the principal methods described in the literature in order to compare their performances (measuring window, reliability, robustness) and to identify the pros and the cons of each method.
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Affiliation(s)
- S Jouanneau
- University of Nantes, UMR CNRS 6144 GEPEA CBAC, Campus de la Courtaisière, IUT, 18 Bd G. Defferre, 85035 La Roche sur Yon, France
| | - L Recoules
- LAAS-CNRS, 7, Avenue du Colonel Roche, BP 54200, 31031 Toulouse cedex 4, France; BIONEF, 73 rue de la Plaine, 75020 Paris, France
| | - M J Durand
- University of Nantes, UMR CNRS 6144 GEPEA CBAC, Campus de la Courtaisière, IUT, 18 Bd G. Defferre, 85035 La Roche sur Yon, France
| | - A Boukabache
- LAAS-CNRS, 7, Avenue du Colonel Roche, BP 54200, 31031 Toulouse cedex 4, France
| | - V Picot
- LAAS-CNRS, 7, Avenue du Colonel Roche, BP 54200, 31031 Toulouse cedex 4, France
| | - Y Primault
- BIONEF, 73 rue de la Plaine, 75020 Paris, France
| | - A Lakel
- CSTB, 11 rue Henri Picherit, BP 82341, 44323 Nantes Cedex 3, France
| | - M Sengelin
- Sotralentz, 3 rue de Bettwiller, BP 10028, 67320 Drulingen, France
| | - B Barillon
- SUEZ Environment, 38, Rue du Président Wilson, 78230 LE PECQ, France
| | - G Thouand
- University of Nantes, UMR CNRS 6144 GEPEA CBAC, Campus de la Courtaisière, IUT, 18 Bd G. Defferre, 85035 La Roche sur Yon, France.
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Nakamura H, Hattori D, Tokunaga D, Suzuki Y. An isothermal absorptiometric assay for viable microbes using the redox color indicator 2,6-dichlorophenolindophenol. Anal Biochem 2013; 441:140-6. [DOI: 10.1016/j.ab.2013.07.010] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2013] [Revised: 07/03/2013] [Accepted: 07/08/2013] [Indexed: 11/29/2022]
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Raud M, Tenno T, Jõgi E, Kikas T. Comparative study of semi-specific Aeromonas hydrophila and universal Pseudomonas fluorescens biosensors for BOD measurements in meat industry wastewaters. Enzyme Microb Technol 2012; 50:221-6. [DOI: 10.1016/j.enzmictec.2012.01.003] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2011] [Revised: 10/10/2011] [Accepted: 01/11/2012] [Indexed: 11/27/2022]
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Raud M, Tutt M, Jõgi E, Kikas T. BOD biosensors for pulp and paper industry wastewater analysis. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2011; 19:3039-3045. [PMID: 22374188 DOI: 10.1007/s11356-012-0817-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2011] [Accepted: 02/09/2012] [Indexed: 05/31/2023]
Abstract
INTRODUCTION Two semi-specific microbial biosensors were constructed for the analysis of biochemical oxygen demand (BOD) in high-cellulose-content pulp and paper industry wastewaters. The biosensors were based on living cells of Bacillus subtilis and Paenibacillus sp. immobilized in an agarose gel matrix. Semi-specific microorganisms were isolated from various samples (decaying sawdust and rabbit manure) and were chosen based on their ability to assimilate cellulose. MATERIALS & METHODS The biosensors were calibrated with the Organization for Economic Cooperation and Development synthetic wastewater, and measurements with different wastewaters were conducted. RESULTS The response time of biosensors using the steady-state method was 20-25 min, and the service life of immobilized microorganisms was 96 days. Detection limit was 5 mg/l of BOD(7) while linear ranges extended up to 55 and 50 mg/l of the BOD(7) for B. subtilis- and Paenibacillus sp.-based biosensors, respectively. Repeatability and reproducibility of both biosensors were within the limits set by APHA-less than 15.4%. In comparison, both biosensors overestimated the BOD(7) values in paper mill wastewaters and underestimated the BOD(7) in aspen pulp mill wastewater. CONCLUSIONS The semi-specific biosensors are suitable for the estimation of organic pollution derived from cellulose, while the detection of pollution derived from tannins and lignins was minor. Better results in terms of accuracy and repeatability were gained with Paenibacillus sp. biosensor.
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Affiliation(s)
- Merlin Raud
- Institute of Chemistry, University of Tartu, Ravila 14a, 50411, Tartu, Estonia.
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Pasco NF, Weld RJ, Hay JM, Gooneratne R. Development and applications of whole cell biosensors for ecotoxicity testing. Anal Bioanal Chem 2011; 400:931-45. [DOI: 10.1007/s00216-011-4663-6] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2010] [Revised: 12/22/2010] [Accepted: 01/03/2011] [Indexed: 10/18/2022]
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Ponomareva ON, Arlyapov VA, Alferov VA, Reshetilov AN. Microbial biosensors for detection of biological oxygen demand (a Review). APPL BIOCHEM MICRO+ 2011. [DOI: 10.1134/s0003683811010108] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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A method for assaying perchlorate concentration in microbial cultures using the fluorescent dye resazurin. J Microbiol Methods 2010; 81:26-32. [DOI: 10.1016/j.mimet.2010.01.019] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2009] [Revised: 01/12/2010] [Accepted: 01/16/2010] [Indexed: 11/20/2022]
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Abstract
Since the first microbial cell sensor was studied by Karube et al. in 1977, many types of yeast based sensors have been developed as analytical tools. Yeasts are known as facultative anaerobes. Facultative anaerobes can survive in both aerobic and anaerobic conditions. The yeast based sensor consisted of a DO electrode and an immobilized omnivorous yeast. In yeast based sensor development, many kinds of yeast have been employed by applying their characteristics to adapt to the analyte. For example, Trichosporon cutaneum was used to estimate organic pollution in industrial wastewater. Yeast based sensors are suitable for online control of biochemical processes and for environmental monitoring. In this review, principles and applications of yeast based sensors are summarized.
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Shimomura-Shimizu M, Karube I. Applications of microbial cell sensors. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2010; 118:1-30. [PMID: 20087723 DOI: 10.1007/10_2009_19] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Since the first microbial cell sensor was studied by Karube et al. in 1977, many types of microbial cell sensors have been developed as analytical tools. The microbial cell sensor utilizes microbes as a sensing element and a transducer. The characteristics of microbial cell sensors as sensing devices are a complete contrast to those of enzyme sensors or immunosensors, which are highly specific for the substrates of interest, although the specificity of the microbial cell sensor has been improved by genetic modification of the microbe used as the sensing element. Microbial cell sensors have the advantages of tolerance to measuring conditions, a long lifetime, and good cost performance, and have the disadvantage of a long response time. In this review, applications of microbial cell sensors are summarized.
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Affiliation(s)
- Mifumi Shimomura-Shimizu
- School of Bioscience and Biotechnology, Tokyo University of Technology, Hachioji, Tokyo 1920982, Japan
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Wang J, Zhang Y, Wang Y, Xu R, Sun Z, Jie Z. An innovative reactor-type biosensor for BOD rapid measurement. Biosens Bioelectron 2009; 25:1705-9. [PMID: 20056404 DOI: 10.1016/j.bios.2009.12.018] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2009] [Revised: 12/11/2009] [Accepted: 12/14/2009] [Indexed: 11/26/2022]
Abstract
Biochemical oxygen demand (BOD) is one of the most important and widely used parameters for characterizing the organic pollution of water and wastewater. In this paper, a novel reactor-type biosensor for rapid measurement of BOD was developed, based on using immobilized microbial cell (IMC) beads as recognition bio-element in a completely mixed reactor which was used as determining chamber, replacing the traditionally used membrane as recognition bio-element. The IMC beads were freely suspended in the aqueous solution, so the mass transfer resistance for dissolved oxygen and organic compounds significantly reduced, and the quantity of the microbial cells used as recognition element can be easily adjusted, in comparison with the traditional membrane-type BOD biosensor, in which exists a unadjustable contradiction between the quantity of biomass and the thickness of the bio-membrane, thus limiting the stability and the detection limit. This novel kind of BOD biosensor significantly increased the sensitivity of the response, the detecting precision and prolonged the life time of the recognition element. The experimental data showed that the most appropriate temperature for biochemical reaction in the reactor was 30 degrees C, and the IMC beads could keep the bioactivity for about 70d at the detecting frequency of 8 times every day. The standard deviation of repeatability and the reproducibility of responses were within +/-6.4% and +/-5.0%, respectively, which are within acceptable bias limits, and meet the requirement of BOD rapid measurement.
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Affiliation(s)
- Jianlong Wang
- Laboratory of Environmental Technology, INET, Tsinghua University, Beijing 100084, PR China.
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Nakamura H, Tanaka R, Suzuki K, Yataka M, Mogi Y. A direct determination method for ethanol concentrations in alcoholic beverages employing a eukaryote double-mediator system. Food Chem 2009. [DOI: 10.1016/j.foodchem.2009.04.026] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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A flow injection analysis system with encapsulated high-density Saccharomyces cerevisiae cells for rapid determination of biochemical oxygen demand. Appl Microbiol Biotechnol 2009; 83:217-23. [PMID: 19153729 DOI: 10.1007/s00253-008-1852-0] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2008] [Revised: 12/23/2008] [Accepted: 12/29/2008] [Indexed: 11/27/2022]
Abstract
The biochemical oxygen demand (BOD) determination was studied using a novel flow injection analysis (FIA) system with encapsulated Saccharomyces cerevisiae cells and an oxygen electrode and was compared with conventional 5-day BOD tests. S. cerevisiae cells were packed in a calcium alginate capsule at a dry cell weight of 250 g/l of capsule core. The level of dissolved oxygen (DO) was reduced due to the enhanced respiratory activity of the microbial cells when the injected nutrient passed through the bioreactor. The decrease in DO (DeltaDO) was intensified with the amount of microbial cells packed in the bioreactor. However, the specific DeltaDO decreased as the amount of cells loaded in the bioreactor increased. The DeltaDO value was dependent on the pH and temperature of the mobile phase and reached its maximum value at 35 degrees C and pH 7-8. Also, DeltaDO became larger at longer response times as the flow rate of the mobile phase decreased. The measurement of DeltaDO was repeated more than six times consecutively using a 20-ppm standard glucose and glutamic acid solution, which confirmed the reproducibility with a standard deviation of 0.95%. A strong linear correlation between DeltaDO and BOD was also observed. The 5-day BOD values of actual water and wastewater samples were in accordance with the BOD values obtained by this FIA method using encapsulated S. cerevisiae cells. Unlike the cell-immobilized bead system, there was no contamination of the bioreactor resulting from any leak of yeast cells from the sensor capsules during BOD measurements.
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An enzyme-chromogenic surface plasmon resonance biosensor probe for hydrogen peroxide determination using a modified Trinder's reagent. Biosens Bioelectron 2008; 24:455-60. [DOI: 10.1016/j.bios.2008.04.022] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2008] [Revised: 03/30/2008] [Accepted: 04/29/2008] [Indexed: 11/19/2022]
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Absorption-based highly sensitive and reproducible biochemical oxygen demand measurement method for seawater using salt-tolerant yeast Saccharomyces cerevisiae ARIF KD-003. Anal Chim Acta 2008; 620:127-33. [DOI: 10.1016/j.aca.2008.05.008] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2008] [Revised: 04/29/2008] [Accepted: 05/06/2008] [Indexed: 11/23/2022]
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John Wiley & Sons, Ltd.. Current awareness on yeast. Yeast 2008. [DOI: 10.1002/yea.1459] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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Nakamura H, Shimomura-Shimizu M, Karube I. Development of microbial sensors and their application. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2008; 109:351-394. [PMID: 18004516 DOI: 10.1007/10_2007_085] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Many types of microbial sensors have been developed as analytical tools since the first microbial sensor was studied by Karube et al. in 1977. The microbial sensor consists of a transducer and microbe as a sensing element. The characteristics of the microbial sensors are a complete contrast to those of enzyme sensors or immunosensors, which are highly specific for the substrates of interest, although the specificity of the microbial sensor has been improved by genetic modification of the microbe used as the sensing element. Microbial sensors have the advantages of tolerance to measuring conditions, a long lifetime, and cost performance, and also have the disadvantage of a long response time. In this review, the long history of microbial sensor development is summarized.
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Affiliation(s)
- Hideaki Nakamura
- School of Bionics, Tokyo University of Technology, 1404-1 Katakura, Hachioji, 192-0982 Tokyo, Japan
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