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Liu C, Liu H, Li Y, Xiao Z, Wang Y, Guo H, Luo J. Establishing a 4D-CT lung function related volumetric dose model to reduce radiation pneumonia. Sci Rep 2024; 14:12589. [PMID: 38824238 PMCID: PMC11144207 DOI: 10.1038/s41598-024-63251-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Accepted: 05/27/2024] [Indexed: 06/03/2024] Open
Abstract
In order to study how to use pulmonary functional imaging obtained through 4D-CT fusion for radiotherapy planning, and transform traditional dose volume parameters into functional dose volume parameters, a functional dose volume parameter model that may reduce level 2 and above radiation pneumonia was obtained. 41 pulmonary tumor patients who underwent 4D-CT in our department from 2020 to 2023 were included. MIM Software (MIM 7.0.7; MIM Software Inc., Cleveland, OH, USA) was used to register adjacent phase CT images in the 4D-CT series. The three-dimensional displacement vector of CT pixels was obtained when changing from one respiratory state to another respiratory state, and this three-dimensional vector was quantitatively analyzed. Thus, a color schematic diagram reflecting the degree of changes in lung CT pixels during the breathing process, namely the distribution of ventilation function strength, is obtained. Finally, this diagram is fused with the localization CT image. Select areas with Jacobi > 1.2 as high lung function areas and outline them as fLung. Import the patient's DVH image again, fuse the lung ventilation image with the localization CT image, and obtain the volume of fLung different doses (V60, V55, V50, V45, V40, V35, V30, V25, V20, V15, V10, V5). Analyze the functional dose volume parameters related to the risk of level 2 and above radiation pneumonia using R language and create a predictive model. By using stepwise regression and optimal subset method to screen for independent variables V35, V30, V25, V20, V15, and V10, the prediction formula was obtained as follows: Risk = 0.23656-0.13784 * V35 + 0.37445 * V30-0.38317 * V25 + 0.21341 * V20-0.10209 * V15 + 0.03815 * V10. These six independent variables were analyzed using a column chart, and a calibration curve was drawn using the calibrate function. It was found that the Bias corrected line and the Apparent line were very close to the Ideal line, The consistency between the predicted value and the actual value is very good. By using the ROC function to plot the ROC curve and calculating the area under the curve: 0.8475, 95% CI 0.7237-0.9713, it can also be determined that the accuracy of the model is very high. In addition, we also used Lasso method and random forest method to filter out independent variables with different results, but the calibration curve drawn by the calibration function confirmed poor prediction performance. The function dose volume parameters V35, V30, V25, V20, V15, and V10 obtained through 4D-CT are key factors affecting radiation pneumonia. Establishing a predictive model can provide more accurate lung restriction basis for clinical radiotherapy planning.
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Affiliation(s)
- Chunmei Liu
- Department of Radiation Oncology, The Second Hospital of Hebei Medical University, 215 West Heping Road, Shijiazhuang, 050000, Hebei, China
| | - Huizhi Liu
- Department of Radiation Oncology, The Second Hospital of Hebei Medical University, 215 West Heping Road, Shijiazhuang, 050000, Hebei, China
| | - Yange Li
- Department of Radiation Oncology, The Second Hospital of Hebei Medical University, 215 West Heping Road, Shijiazhuang, 050000, Hebei, China
| | - Zhiqing Xiao
- Department of Radiation Oncology, The Second Hospital of Hebei Medical University, 215 West Heping Road, Shijiazhuang, 050000, Hebei, China
| | - Yanqiang Wang
- Department of Radiation Oncology, The Second Hospital of Hebei Medical University, 215 West Heping Road, Shijiazhuang, 050000, Hebei, China
| | - Han Guo
- Department of Radiation Oncology, The Second Hospital of Hebei Medical University, 215 West Heping Road, Shijiazhuang, 050000, Hebei, China
| | - Jianmin Luo
- Department of Hematology, The Second Hospital of Hebei Medical University, 215 West Heping Road, Shijiazhuang, 050000, Hebei, China.
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Midroni J, Salunkhe R, Liu Z, Chow R, Boldt G, Palma D, Hoover D, Vinogradskiy Y, Raman S. Incorporation of Functional Lung Imaging Into Radiation Therapy Planning in Patients With Lung Cancer: A Systematic Review and Meta-Analysis. Int J Radiat Oncol Biol Phys 2024:S0360-3016(24)00481-4. [PMID: 38631538 DOI: 10.1016/j.ijrobp.2024.04.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 03/27/2024] [Accepted: 04/02/2024] [Indexed: 04/19/2024]
Abstract
Our purpose was to provide an understanding of current functional lung imaging (FLI) techniques and their potential to improve dosimetry and outcomes for patients with lung cancer receiving radiation therapy (RT). Excerpta Medica dataBASE (EMBASE), PubMed, and Cochrane Library were searched from 1990 until April 2023. Articles were included if they reported on FLI in one of: techniques, incorporation into RT planning for lung cancer, or quantification of RT-related outcomes for patients with lung cancer. Studies involving all RT modalities, including stereotactic body RT and particle therapy, were included. Meta-analyses were conducted to investigate differences in dose-function parameters between anatomic and functional RT planning techniques, as well as to investigate correlations of dose-function parameters with grade 2+ radiation pneumonitis (RP). One hundred seventy-eight studies were included in the narrative synthesis. We report on FLI modalities, dose-response quantification, functional lung (FL) definitions, FL avoidance techniques, and correlations between FL irradiation and toxicity. Meta-analysis results show that FL avoidance planning gives statistically significant absolute reductions of 3.22% to the fraction of well-ventilated lung receiving 20 Gy or more, 3.52% to the fraction of well-perfused lung receiving 20 Gy or more, 1.3 Gy to the mean dose to the well-ventilated lung, and 2.41 Gy to the mean dose to the well-perfused lung. Increases in the threshold value for defining FL are associated with decreases in functional parameters. For intensity modulated RT and volumetric modulated arc therapy, avoidance planning results in a 13% rate of grade 2+ RP, which is reduced compared with results from conventional planning cohorts. A trend of increased predictive ability for grade 2+ RP was seen in models using FL information but was not statistically significant. FLI shows promise as a method to spare FL during thoracic RT, but interventional trials related to FL avoidance planning are sparse. Such trials are critical to understanding the effect of FL avoidance planning on toxicity reduction and patient outcomes.
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Affiliation(s)
- Julie Midroni
- Temerty Faculty of Medicine, University of Toronto, Toronto, Canada; Radiation Medicine Program, Princess Margaret Cancer Center, Toronto, Canada
| | - Rohan Salunkhe
- Radiation Medicine Program, Princess Margaret Cancer Center, Toronto, Canada; Department of Radiation Oncology, University of Toronto, Toronto, Canada
| | - Zhihui Liu
- Biostatistics, Princess Margaret Cancer Center, Toronto, Canada
| | - Ronald Chow
- Temerty Faculty of Medicine, University of Toronto, Toronto, Canada; Radiation Medicine Program, Princess Margaret Cancer Center, Toronto, Canada; London Regional Cancer Program, London Health Sciences Centre, Schulich School of Medicine and Dentistry, University of Western Ontario, London, Canada
| | - Gabriel Boldt
- London Regional Cancer Program, London Health Sciences Centre, Schulich School of Medicine and Dentistry, University of Western Ontario, London, Canada
| | - David Palma
- London Regional Cancer Program, London Health Sciences Centre, Schulich School of Medicine and Dentistry, University of Western Ontario, London, Canada; Ontario Institute for Cancer Research, Toronto, Canada
| | - Douglas Hoover
- London Regional Cancer Program, London Health Sciences Centre, Schulich School of Medicine and Dentistry, University of Western Ontario, London, Canada
| | - Yevgeniy Vinogradskiy
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, United States of America; Department of Radiation Oncology, Thomas Jefferson University, Philadelphia, United States of America
| | - Srinivas Raman
- Radiation Medicine Program, Princess Margaret Cancer Center, Toronto, Canada; Department of Radiation Oncology, University of Toronto, Toronto, Canada.
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Lombardo J, Castillo E, Castillo R, Miller R, Jones B, Miften M, Kavanagh B, Dicker A, Boyle C, Leiby B, Banks J, Simone NL, Movsas B, Grills I, Guerrero T, Rusthoven CG, Vinogradskiy Y. Prospective Trial of Functional Lung Avoidance Radiation Therapy for Lung Cancer: Quality of Life Report. Int J Radiat Oncol Biol Phys 2024:S0360-3016(24)00476-0. [PMID: 38614278 DOI: 10.1016/j.ijrobp.2024.03.046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Revised: 03/26/2024] [Accepted: 03/29/2024] [Indexed: 04/15/2024]
Abstract
PURPOSE A novel form of lung function imaging has been developed that uses 4-dimensional computed tomography (4DCT) data to generate lung ventilation images (4DCT-ventilation). Functional avoidance uses 4DCT-ventilation to reduce doses to functional lung with the aim of reducing pulmonary side effects. A phase 2, multicenter 4DCT-ventilation functional avoidance clinical trial was completed. The purpose of this work was to quantify changes in patient-reported outcomes (PROs) for patients treated with functional avoidance and determine which metrics are predictive of PRO changes. MATERIALS AND METHODS Patients with locally advanced lung cancer receiving curative-intent radiation therapy were accrued. Each patient had a 4DCT-ventilation image generated using 4DCT data and image processing. PRO instruments included the Functional Assessment of Cancer Therapy-Lung (FACT-L) questionnaire administered pretreatment; at the end of treatment; and at 3, 6, and 12 months posttreatment. Using the FACT-Trial Outcome Index and the FACT-Lung Cancer Subscale results, the percentage of clinically meaningful declines (CMDs) were determined. A linear mixed-effects model was used to determine which patient, clinical, dose, and dose-function metrics were predictive of PRO decline. RESULTS Of the 59 patients who completed baseline PRO surveys. 83% had non-small cell lung cancer, with 75% having stage 3 disease. The median dose was 60 Gy in 30 fractions. CMD FACT-Trial Outcome Index decline was 46.3%, 38.5%, and 26.8%, at 3, 6, and 12 months, respectively. CMD FACT-Lung Cancer Subscale decline was 33.3%, 33.3%, and 29.3%, at 3, 6, and 12 months, respectively. Although an increase in most dose and dose-function parameters was associated with a modest decline in PROs, none of the results were significant (all P > .053). CONCLUSIONS The current work presents an innovative combination of use of functional avoidance and PRO assessment and is the first report of PROs for patients treated with prospective 4DCT-ventilation functional avoidance. Approximately 30% of patients had clinically significant decline in PROs at 12 months posttreatment. The study provides additional data on outcomes with 4DCT-ventilation functional avoidance.
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Affiliation(s)
- Joseph Lombardo
- Thomas Jefferson University, Radiation Oncology, Philadelphia, Pennsylvania
| | - Edward Castillo
- UT Austin, Department of Biomedical Engineering, Austin, Texas
| | - Richard Castillo
- Emory University School of Medicine, Radiation Oncology, Atlanta, Georgia
| | - Ryan Miller
- Thomas Jefferson University, Radiation Oncology, Philadelphia, Pennsylvania
| | - Bernard Jones
- University of Colorado, Radiation Oncology, Denver, Colorado
| | - Moyed Miften
- University of Colorado, Radiation Oncology, Denver, Colorado
| | - Brian Kavanagh
- University of Colorado, Radiation Oncology, Denver, Colorado
| | - Adam Dicker
- Thomas Jefferson University, Radiation Oncology, Philadelphia, Pennsylvania
| | - Cullen Boyle
- Thomas Jefferson University, Radiation Oncology, Philadelphia, Pennsylvania
| | - Benjamin Leiby
- Thomas Jefferson University, Department of Pharmacology, Physiology, and Cancer Biology, Philadelphia, Pennsylvania
| | - Joshua Banks
- Thomas Jefferson University, Department of Pharmacology, Physiology, and Cancer Biology, Philadelphia, Pennsylvania
| | - Nicole L Simone
- Thomas Jefferson University, Radiation Oncology, Philadelphia, Pennsylvania
| | - Benjamin Movsas
- Henry Ford Cancer Institute, Radiation Oncology, Detroit, Michigan
| | - Inga Grills
- Beaumont Health, Radiation Oncology, Royal Oak, Michigan
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Gu J, Qiu Q, Zhu J, Cao Q, Hou Z, Li B, Shu H. Deep learning-based combination of [18F]-FDG PET and CT images for producing pulmonary perfusion image. Med Phys 2023; 50:7779-7790. [PMID: 37387645 DOI: 10.1002/mp.16566] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Accepted: 06/07/2023] [Indexed: 07/01/2023] Open
Abstract
BACKGROUND The main application of [18F] FDG-PET (18 FDG-PET) and CT images in oncology is tumor identification and quantification. Combining PET and CT images to mine pulmonary perfusion information for functional lung avoidance radiation therapy (FLART) is desirable but remains challenging. PURPOSE To develop a deep-learning-based (DL) method to combine 18 FDG-PET and CT images for producing pulmonary perfusion images (PPI). METHODS Pulmonary technetium-99 m-labeled macroaggregated albumin SPECT (PPISPECT ), 18 FDG-PET, and CT images obtained from 53 patients were enrolled. CT and PPISPECT images were rigidly registered, and registration displacement was subsequently used to align 18 FDG-PET and PPISPECT images. The left/right lung was separated and rigidly registered again to improve the registration accuracy. A DL model based on 3D Unet architecture was constructed to directly combine multi-modality 18 FDG-PET and CT images for producing PPI (PPIDLM ). 3D Unet architecture was used as the basic architecture, and the input was expanded from a single-channel to a dual-channel to combine multi-modality images. For comparative evaluation, 18 FDG-PET images were also used alone to generate PPIDLPET . Sixty-seven samples were randomly selected for training and cross-validation, and 36 were used for testing. The Spearman correlation coefficient (rs ) and multi-scale structural similarity index measure (MS-SSIM) between PPIDLM /PPIDLPET and PPISPECT were computed to assess the statistical and perceptual image similarities. The Dice similarity coefficient (DSC) was calculated to determine the similarity between high-/low- functional lung (HFL/LFL) volumes. RESULTS The voxel-wise rs and MS-SSIM of PPIDLM /PPIDLPET were 0.78 ± 0.04/0.57 ± 0.03, 0.93 ± 0.01/0.89 ± 0.01 for cross-validation and 0.78 ± 0.11/0.55 ± 0.18, 0.93 ± 0.03/0.90 ± 0.04 for testing. PPIDLM /PPIDLPET achieved averaged DSC values of 0.78 ± 0.03/0.64 ± 0.02 for HFL and 0.83 ± 0.01/0.72 ± 0.03 for LFL in the training dataset and 0.77 ± 0.11/0.64 ± 0.12, 0.82 ± 0.05/0.72 ± 0.06 in the testing dataset. PPIDLM yielded a stronger correlation and higher MS-SSIM with PPISPECT than PPIDLPET (p < 0.001). CONCLUSIONS The DL-based method integrates lung metabolic and anatomy information for producing PPI and significantly improved the accuracy over methods based on metabolic information alone. The generated PPIDLM can be applied for pulmonary perfusion volume segmentation, which is potentially beneficial for FLART treatment plan optimization.
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Affiliation(s)
- Jiabing Gu
- Laboratory of Image Science and Technology, School of Computer Science and Engineering Southeast University, Nanjing, Jiangsu, P.R. China
- Department of Radiation Oncology Physics and Technology, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, P.R. China
| | - Qingtao Qiu
- Laboratory of Image Science and Technology, School of Computer Science and Engineering Southeast University, Nanjing, Jiangsu, P.R. China
| | - Jian Zhu
- Department of Radiation Oncology Physics and Technology, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, P.R. China
- Shandong Key Laboratory of Digital Medicine and Computer Assisted Surgery, The Affiliated Hospital of Qingdao University, Qingdao, P.R. China
| | - Qiang Cao
- Department of Radiation Oncology Physics and Technology, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, P.R. China
| | - Zhen Hou
- The Comprehensive Cancer Centre of Nanjing Drum Tower Hospital, The Affiliated Hospital of Nanjing University Medical School, Nanjing, Jiangsu, P.R. China
| | - Baosheng Li
- Laboratory of Image Science and Technology, School of Computer Science and Engineering Southeast University, Nanjing, Jiangsu, P.R. China
- Department of Radiation Oncology Physics and Technology, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, P.R. China
| | - Huazhong Shu
- Laboratory of Image Science and Technology, School of Computer Science and Engineering Southeast University, Nanjing, Jiangsu, P.R. China
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Flakus MJ, Wuschner AE, Wallat EM, Shao W, Meudt J, Shanmuganayagam D, Christensen GE, Reinhardt JM, Bayouth JE. Robust quantification of CT-ventilation biomarker techniques and repeatability in a porcine model. Med Phys 2023; 50:6366-6378. [PMID: 36999913 PMCID: PMC10544701 DOI: 10.1002/mp.16400] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2022] [Accepted: 03/13/2023] [Indexed: 04/01/2023] Open
Abstract
BACKGROUND Biomarkers estimating local lung ventilation have been derived from computed tomography (CT) imaging using various image acquisition and post-processing techniques. CT-ventilation biomarkers have potential clinical use in functional avoidance radiation therapy (RT), in which RT treatment plans are optimized to reduce dose delivered to highly ventilated lung. Widespread clinical implementation of CT-ventilation biomarkers necessitates understanding of biomarker repeatability. Performing imaging within a highly controlled experimental design enables quantification of error associated with remaining variables. PURPOSE To characterize CT-ventilation biomarker repeatability and dependence on image acquisition and post-processing methodology in anesthetized and mechanically ventilated pigs. METHODS Five mechanically ventilated Wisconsin Miniature Swine (WMS) received multiple consecutive four-dimensional CT (4DCT) and maximum inhale and exhale breath-hold CT (BH-CT) scans on five dates to generate CT-ventilation biomarkers. Breathing maneuvers were controlled with an average tidal volume difference <200 cc. As surrogates for ventilation, multiple local expansion ratios (LERs) were calculated from the acquired CT scans using Jacobian-based post-processing techniques.L E R 2 $LER_2$ measured local expansion between an image pair using either inhale and exhale BH-CT images or two 4DCT breathing phase images.L E R N $LER_N$ measured the maximum local expansion across the 4DCT breathing phase images. Breathing maneuver consistency, intra- and interday biomarker repeatability, image acquisition and post-processing technique dependence were quantitatively analyzed. RESULTS Biomarkers showed strong agreement with voxel-wise Spearman correlationρ > 0.9 $\rho > 0.9$ for intraday repeatability andρ > 0.8 $\rho > 0.8$ for all other comparisons, including between image acquisition techniques. Intra- and interday repeatability were significantly different (p < 0.01). LER2 and LERN post-processing did not significantly affect intraday repeatability. CONCLUSIONS 4DCT and BH-CT ventilation biomarkers derived from consecutive scans show strong agreement in controlled experiments with nonhuman subjects.
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Affiliation(s)
- Mattison J Flakus
- Department of Medical Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Antonia E Wuschner
- Department of Medical Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Eric M Wallat
- Department of Medical Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Wei Shao
- Department of Medicine, University of Florida, Gainesville, Florida, USA
| | - Jen Meudt
- Department of Animal and Dairy Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Dhanansayan Shanmuganayagam
- Department of Animal and Dairy Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA
- Department of Surgery, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Gary E Christensen
- Department of Electrical and Computer Engineering, University of Iowa, Iowa City, Iowa, USA
- Department of Radiation Oncology, University of Iowa, Iowa City, Iowa, USA
| | - Joseph M Reinhardt
- Roy J. Carver Department of Biomedical Engineering, University of Iowa, Iowa City, Iowa, USA
| | - John E Bayouth
- Department of Radiation Medicine, Oregon Health Sciences University, Portland, Oregon, USA
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Huang YH, Teng X, Zhang J, Chen Z, Ma Z, Ren G, Kong FMS, Ge H, Cai J. Respiratory Invariant Textures From Static Computed Tomography Scans for Explainable Lung Function Characterization. J Thorac Imaging 2023; 38:286-296. [PMID: 37265243 DOI: 10.1097/rti.0000000000000717] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
PURPOSE The inherent characteristics of lung tissue independent of breathing maneuvers may provide fundamental information for function assessment. This paper attempted to correlate textural signatures from computed tomography (CT) with pulmonary function measurements. MATERIALS AND METHODS Twenty-one lung cancer patients with thoracic 4-dimensional CT, DTPA-single-photon emission CT ventilation ( VNM ) scans, and available spirometry measurements (forced expiratory volume in 1 s, FEV 1 ; forced vital capacity, FVC; and FEV 1 /FVC) were collected. In subregional feature discovery, function-correlated candidates were identified from 79 radiomic features based on the statistical strength to differentiate defected/nondefected lung regions. Feature maps (FMs) of selected candidates were generated on 4-dimensional CT phases for a voxel-wise feature distribution study. Quantitative metrics were applied for validations, including the Spearman correlation coefficient (SCC) and the Dice similarity coefficient for FM- VNM spatial agreement assessments, intraclass correlation coefficient for FM interphase robustness evaluations, and FM-spirometry comparisons. RESULTS At the subregion level, 8 function-correlated features were identified (effect size>0.330). The FMs of candidates yielded moderate-to-strong voxel-wise correlations with the reference VNM . The FMs of gray level dependence matrix dependence nonuniformity showed the highest robust (intraclass correlation coefficient=0.96 and P <0.0001) spatial correlation, with median SCCs ranging from 0.54 to 0.59 throughout the 10 breathing phases. Its phase-averaged FM achieved a median SCC of 0.60, a median Dice similarity coefficient of 0.60 (0.65) for high (low) functional lung volumes, and a correlation of 0.565 (0.646) between the spatially averaged feature values and FEV 1 (FEV 1 /FVC). CONCLUSIONS The results provide further insight into the underlying association of specific pulmonary textures with both local ( VNM ) and global (FEV 1 /FVC, FEV 1 ) functions. Further validations of the FM generalizability and the standardization of implementation protocols are warranted before clinically relevant investigations.
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Affiliation(s)
- Yu-Hua Huang
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University
| | - Xinzhi Teng
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University
| | - Jiang Zhang
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University
| | - Zhi Chen
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University
| | - Zongrui Ma
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University
| | - Ge Ren
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University
| | - Feng-Ming Spring Kong
- Department of Clinical Oncology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong SAR
- Department of Clinical Oncology, The University of Hong Kong-Shenzhen Hospital, Shenzhen
| | - Hong Ge
- Department of Radiation Oncology, The Affiliated Cancer Hospital of Zhengzhou University & Henan Cancer Hospital, Zhengzhou, China
| | - Jing Cai
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University
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Katsuta Y, Kadoya N, Kajikawa T, Mouri S, Kimura T, Takeda K, Yamamoto T, Imano N, Tanaka S, Ito K, Kanai T, Nakajima Y, Jingu K. Radiation pneumonitis prediction model with integrating multiple dose-function features on 4DCT ventilation images. Phys Med 2023; 105:102505. [PMID: 36535238 DOI: 10.1016/j.ejmp.2022.11.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 11/18/2022] [Accepted: 11/25/2022] [Indexed: 12/23/2022] Open
Abstract
PURPOSE Radiation pneumonitis (RP) is dose-limiting toxicity for non-small-cell cancer (NSCLC). This study developed an RP prediction model by integrating dose-function features from computed four-dimensional computed tomography (4DCT) ventilation using the least absolute shrinkage and selection operator (LASSO). METHODS Between 2013 and 2020, 126 NSCLC patients were included in this study who underwent a 4DCT scan to calculate ventilation images. We computed two sets of candidate dose-function features from (1) the percentage volume receiving > 20 Gy or the mean dose on the functioning zones determined with the lower cutoff percentile ventilation value, (2) the functioning zones determined with lower and upper cutoff percentile ventilation value using 4DCT ventilation images. An RP prediction model was developed by LASSO while simultaneously determining the regression coefficient and feature selection through fivefold cross-validation. RESULTS We found 39.3 % of our patients had a ≥ grade 2 RP. The mean area under the curve (AUC) values for the developed models using clinical, dose-volume, and dose-function features with a lower cutoff were 0.791, and the mean AUC values with lower and upper cutoffs were 0.814. The relative regression coefficient (RRC) on dose-function features with upper and lower cutoffs revealed a relative impact of dose to each functioning zone to RP. RRCs were 0.52 for the mean dose on the functioning zone, with top 20 % of all functioning zone was two times greater than that of 0.19 for these with 60 %-80 % and 0.17 with 40 %-60 % (P < 0.01). CONCLUSIONS The introduction of dose-function features computed from functioning zones with lower and upper cutoffs in a machine learning framework can improve RP prediction. The RRC given by LASSO using dose-function features allows for the quantification of the RP impact of dose on each functioning zones and having the potential to support treatment planning on functional image-guided radiotherapy.
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Affiliation(s)
- Yoshiyuki Katsuta
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan.
| | - Noriyuki Kadoya
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Tomohiro Kajikawa
- Department of Radiology, Kyoto Prefectural University of Medicine, Kyoto, Japan
| | - Shina Mouri
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Tomoki Kimura
- Department of Radiation Oncology, Kochi Medical School, Kochi University, Nangoku, Japan
| | - Kazuya Takeda
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Takaya Yamamoto
- Department of Radiation Oncology, Graduate School of Biomedical Health Sciences, Hiroshima University, Hiroshima, Japan
| | - Nobuki Imano
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Shohei Tanaka
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Kengo Ito
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Takayuki Kanai
- Department of Radiation Oncology, Yamagata University, Yamagata, Japan
| | - Yujiro Nakajima
- Department of Radiological Sciences, Komazawa University, Tokyo, Japan
| | - Keiichi Jingu
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
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Gu J, Li B, Shu H, Zhu J, Qiu Q, Bai T. Development and verification of radiomics framework for computed tomography image segmentation. Med Phys 2022; 49:6527-6537. [PMID: 35917213 PMCID: PMC9805121 DOI: 10.1002/mp.15904] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 07/19/2022] [Accepted: 07/21/2022] [Indexed: 01/09/2023] Open
Abstract
BACKGROUND Radiomics has been considered an imaging marker for capturing quantitative image information (QII). The introduction of radiomics to image segmentation is desirable but challenging. PURPOSE This study aims to develop and validate a radiomics-based framework for image segmentation (RFIS). METHODS RFIS is designed using features extracted from volume (svfeatures) created by sliding window (swvolume). The 53 svfeatures are extracted from 11 phantom series. Outliers in the svfeature datasets are detected by isolation forest (iForest) and specified as the mean value. The percentage coefficient of variation (%COV) is calculated to evaluate the reproducibility of svfeatures. RFIS is constructed and applied to the gross target volume (GTV) segmentation from the peritumoral region (GTV with a 10 mm margin) to assess its feasibility. The 127 lung cancer images are enrolled. The test-retest method, correlation matrix, and Mann-Whitney U test (p < 0.05) are used to select non-redundant svfeatures of statistical significance from the reproducible svfeatures. The synthetic minority over-sampling technique is utilized to balance the minority group in the training sets. The support vector machine is employed for RFIS construction, which is tuned in the training set using 10-fold stratified cross-validation and then evaluated in the test sets. The swvolumes with the consistent classification results are grouped and merged. Mode filtering is performed to remove very small subvolumes and create relatively large regions of completely uniform character. In addition, RFIS performance is evaluated by the area under the receiver operating characteristic (ROC) curve (AUC), accuracy, sensitivity, specificity, and Dice similarity coefficient (DSC). RESULTS 30249 phantom and 145008 patient image swvolumes were analyzed. Forty-nine (92.45% of 53) svfeatures represented excellent reproducibility(%COV<15). Forty-five features (91.84% of 49) included five categories that passed test-retest analysis. Thirteen svfeatures (28.89% of 45) svfeatures were selected for RFIS construction. RFIS showed an average (95% confidence interval) sensitivity of 0.848 (95% CI:0.844-0.883), a specificity of 0.821 (95% CI: 0.818-0.825), an accuracy of 83.48% (95% CI: 83.27%-83.70%), and an AUC of 0.906 (95% CI: 0.904-0.908) with cross-validation. The sensitivity, specificity, accuracy, and AUC were equal to 0.762 (95% CI: 0.754-0.770), 0.840 (95% CI: 0.837-0.844), 82.29% (95% CI: 81.90%-82.60%), and 0.877 (95% CI: 0.873-0.881) in the test set, respectively. GTV was segmented by grouping and merging swvolume with identical classification results. The mean DSC after mode filtering was 0.707 ± 0.093 in the training sets and 0.688 ± 0.072 in the test sets. CONCLUSION Reproducible svfeatures can capture the differences in QII among swvolumes. RFIS can be applied to swvolume classification, which achieves image segmentation by grouping and merging the swvolume with similar QII.
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Affiliation(s)
- Jiabing Gu
- Southeast UniversityLaboratory of Image Science and TechnologyJiangsu Provincial Joint International Research Laboratory of Medical Information ProcessingCentre de Recherche en Information Biomédicale Sino‐français (CRIBs)NanjingP. R. China,Department of Radiation Oncology Physics and TechnologyShandong Cancer Hospital and InstituteShandong First Medical University and Shandong Academy of Medical SciencesJinanChina
| | - Baosheng Li
- Southeast UniversityLaboratory of Image Science and TechnologyJiangsu Provincial Joint International Research Laboratory of Medical Information ProcessingCentre de Recherche en Information Biomédicale Sino‐français (CRIBs)NanjingP. R. China,Department of Radiation Oncology Physics and TechnologyShandong Cancer Hospital and InstituteShandong First Medical University and Shandong Academy of Medical SciencesJinanChina
| | - Huazhong Shu
- Southeast UniversityLaboratory of Image Science and TechnologyJiangsu Provincial Joint International Research Laboratory of Medical Information ProcessingCentre de Recherche en Information Biomédicale Sino‐français (CRIBs)NanjingP. R. China
| | - Jian Zhu
- Department of Radiation Oncology Physics and TechnologyShandong Cancer Hospital and InstituteShandong First Medical University and Shandong Academy of Medical SciencesJinanChina,Shandong Key Laboratory of Digital Medicine and Computer Assisted SurgeryThe Affiliated Hospital of Qingdao UniversityQingdaoP. R. China
| | - Qingtao Qiu
- Department of Radiation Oncology Physics and TechnologyShandong Cancer Hospital and InstituteShandong First Medical University and Shandong Academy of Medical SciencesJinanChina
| | - Tong Bai
- Department of Radiation Oncology Physics and TechnologyShandong Cancer Hospital and InstituteShandong First Medical University and Shandong Academy of Medical SciencesJinanChina
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9
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Kajikawa T, Kadoya N, Maehara Y, Miura H, Katsuta Y, Nagasawa S, Suzuki G, Yamazaki H, Tamaki N, Yamada K. A deep learning method for translating 3D-CT to SPECT ventilation imaging: First comparison with 81m Kr-gas SPECT ventilation imaging. Med Phys 2022; 49:4353-4364. [PMID: 35510535 PMCID: PMC9545310 DOI: 10.1002/mp.15697] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Revised: 03/29/2022] [Accepted: 04/18/2022] [Indexed: 11/10/2022] Open
Abstract
PURPOSE This study aimed to evaluate the accuracy of deep learning (DL)-based computed tomography (CT) ventilation imaging (CTVI). METHODS A total of 71 cases who underwent single-photon emission CT 81m Kr-gas ventilation (SPECT V) and CT imaging were included. Sixty cases were assigned to the training and validation sets and the remaining 11 cases were assigned to the test set. To directly transform 3DCT (free-breathing CT) images to SPECT V images, a DL-based model was implemented based on the U-Net architecture. The input and output data were 3DCT- and SPECT V-masked, respectively, except for whole-lung volumes. These data were rearranged in voxel size, registered rigidly, cropped, and normalized in pre-processing. In addition to a standard estimation method (i.e., without dropout during the estimation process), a Monte-Carlo Dropout (MCD) method (i.e., with dropout during the estimation process) was used to calculate prediction uncertainty. To evaluate the two models' (CTVIMCD U-Net , CTVIU-Net ) performance, we used five-fold cross-validation for the training and validation sets. To test the final model performances for both approaches, we applied the test set to each trained model and averaged the test prediction results from the five trained models to acquire the mean test result (bagging) for each approach. For the MCD method, the models were predicted repeatedly (sample size = 200), and the average and standard deviation maps were calculated in each voxel from the predicted results: the average maps were defined as test prediction results in each fold. As an evaluation index, the voxel-wise Spearman rank correlation coefficient (Spearman rs ) and dice similarity coefficient (DSC) were calculated. The DSC was calculated for three functional regions (high, moderate, and low) separated by an almost equal volume. The coefficient of variation was defined as prediction uncertainty, and these average values were calculated within three functional regions. The Wilcoxon signed-rank test was used to test for a significant difference between the two DL-based approaches RESULTS: The average indexes with one standard deviation (1SD) between CTVIMCD U-Net and SPECT V were 0.76 ± 0.06, 0.69 ± 0.07, 0.51 ± 0.06, and 0.75 ± 0.04 for Spearman rs , DSChigh , DSCmoderate , and DSClow , respectively. The average indexes with 1SD between CTVIU-Net and SPECT V were 0.72 ± 0.05, 0.66 ± 0.04, 0.48 ± 0.04, and 0.74 ± 0.06 for Spearman rs , DSChigh , DSCmoderate , and DSClow , respectively. These indexes between CTVIMCD U-Net and CTVIU-Net showed no significance difference (Spearman rs , p = 0.175; DSChigh , p = 0.123; DSCmoderate , p = 0.278; DSClow , p = 0.520). The average coefficient of variations with 1SD were 0.27 ± 0.00, 0.27 ± 0.01, and 0.36 ± 0.03 for the high-, moderate-, and low-functional regions, respectively, and the low-functional region showed a tendency to exhibit larger uncertainties than the others. CONCLUSION We evaluated DL-based framework for estimating lung-functional ventilation images only from CT images. The results indicated that the DL-based approach could potentially be used for lung-ventilation estimation. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- Tomohiro Kajikawa
- Department of Radiology, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kyoto, Japan.,Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Noriyuki Kadoya
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Yosuke Maehara
- Department of Radiology, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kyoto, Japan
| | - Hiroshi Miura
- Department of Radiology, Japanese Red Cross Kyoto Daiichi Hospital, Kyoto, Japan
| | - Yoshiyuki Katsuta
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Shinsuke Nagasawa
- Department of Radiology, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kyoto, Japan
| | - Gen Suzuki
- Department of Radiology, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kyoto, Japan
| | - Hideya Yamazaki
- Department of Radiology, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kyoto, Japan
| | - Nagara Tamaki
- Department of Radiology, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kyoto, Japan
| | - Kei Yamada
- Department of Radiology, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kyoto, Japan
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10
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Katsuta Y, Kadoya N, Mouri S, Tanaka S, Kanai T, Takeda K, Yamamoto T, Ito K, Kajikawa T, Nakajima Y, Jingu K. Prediction of radiation pneumonitis with machine learning using 4D-CT based dose-function features. JOURNAL OF RADIATION RESEARCH 2022; 63:71-79. [PMID: 34718683 PMCID: PMC8776701 DOI: 10.1093/jrr/rrab097] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Revised: 08/20/2021] [Indexed: 06/13/2023]
Abstract
In this article, we highlight the fundamental importance of the simultaneous use of dose-volume histogram (DVH) and dose-function histogram (DFH) features based on functional images calculated from 4-dimensional computed tomography (4D-CT) and deformable image registration (DIR) in developing a multivariate radiation pneumonitis (RP) prediction model. The patient characteristics, DVH features and DFH features were calculated from functional images by Hounsfield unit (HU) and Jacobian metrics, for an RP grade ≥ 2 multivariate prediction models were computed from 85 non-small cell lung cancer patients. The prediction model is developed using machine learning via a kernel-based support vector machine (SVM) machine. In the patient cohort, 21 of the 85 patients (24.7%) presented with RP grade ≥ 2. The median area under curve (AUC) was 0.58 for the generated 50 prediction models with patient clinical features and DVH features. When HU metric and Jacobian metric DFH features were added, the AUC improved to 0.73 and 0.68, respectively. We conclude that predictive RP models that incorporate DFH features were successfully developed via kernel-based SVM. These results demonstrate that effectiveness of the simultaneous use of DVH features and DFH features calculated from 4D-CT and DIR on functional image-guided radiotherapy.
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Affiliation(s)
- Yoshiyuki Katsuta
- Corresponding author. Department of Radiation Oncology, Tohoku University Graduate School of Medicine, 1-1 Seiryo-machi, Aoba-ku, Sendai, 980-8574, Japan, Tel: +81-22-717-7312, Fax: +81-22-717-7316, E-mail:
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11
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Feng A, Shao Y, Wang H, Chen H, Gu H, Duan Y, Gan W, Xu Z. A novel lung-avoidance planning strategy based on 4DCT ventilation imaging and CT density characteristics for stage III non-small-cell lung cancer patients. Strahlenther Onkol 2021; 197:1084-1092. [PMID: 34351454 PMCID: PMC8604857 DOI: 10.1007/s00066-021-01821-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2020] [Accepted: 07/02/2021] [Indexed: 12/14/2022]
Abstract
BACKGROUND Functional planning based merely on 4DCT ventilation imaging has limitations. In this study, we proposed a radiotherapy planning strategy based on 4DCT ventilation imaging and CT density characteristics. MATERIALS AND METHODS For 20 stage III non-small-cell lung cancer (NSCLC) patients, clinical plans and lung-avoidance plans were generated. Through deformable image registration (DIR) and quantitative image analysis, a 4DCT ventilation map was calculated. High-, medium-, and low-ventilation regions of the lung were defined based on the ventilation value. In addition, the total lung was also divided into high-, medium-, and low-density areas according to the HU threshold. The lung-avoidance plan aimed to reduce the dose to functional and high-density lungs while meeting standard target and critical structure constraints. Standard and dose-function metrics were compared between the clinical and lung-avoidance plans. RESULTS Lung avoidance plans led to significant reductions in high-function and high-density lung doses, without significantly increasing other organ at risk (OAR) doses, but at the expense of a significantly degraded homogeneity index (HI) and conformity index (CI; p < 0.05) of the planning target volume (PTV) and a slight increase in monitor units (MU) as well as in the number of segments (p > 0.05). Compared with the clinical plan, the mean lung dose (MLD) in the high-function and high-density areas was reduced by 0.59 Gy and 0.57 Gy, respectively. CONCLUSION A lung-avoidance plan based on 4DCT ventilation imaging and CT density characteristics is feasible and implementable, with potential clinical benefits. Clinical trials will be crucial to show the clinical relevance of this lung-avoidance planning strategy.
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Affiliation(s)
- AiHui Feng
- Department of Radiation Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, NO.241 West Huaihai Road, Xuhui District, 20030, Shanghai, China
| | - Yan Shao
- Department of Radiation Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, NO.241 West Huaihai Road, Xuhui District, 20030, Shanghai, China
| | - Hao Wang
- Department of Radiation Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, NO.241 West Huaihai Road, Xuhui District, 20030, Shanghai, China
| | - Hua Chen
- Department of Radiation Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, NO.241 West Huaihai Road, Xuhui District, 20030, Shanghai, China
| | - HengLe Gu
- Department of Radiation Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, NO.241 West Huaihai Road, Xuhui District, 20030, Shanghai, China
| | - YanHua Duan
- Department of Radiation Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, NO.241 West Huaihai Road, Xuhui District, 20030, Shanghai, China
| | - WuTian Gan
- Department of Radiation Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, NO.241 West Huaihai Road, Xuhui District, 20030, Shanghai, China
| | - ZhiYong Xu
- Department of Radiation Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, NO.241 West Huaihai Road, Xuhui District, 20030, Shanghai, China.
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12
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Nair GB, Al-Katib S, Podolsky R, Quinn T, Stevens C, Castillo E. Dynamic lung compliance imaging from 4DCT-derived volume change estimation. Phys Med Biol 2021; 66. [PMID: 34560677 DOI: 10.1088/1361-6560/ac29ce] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Accepted: 09/24/2021] [Indexed: 11/12/2022]
Abstract
Background. Lung compliance (LC) is the ability of the lung to expand with changes in pressure and is one of the earliest physiological measurements to be altered in patients with parenchymal lung disease. Therefore, compliance monitoring could potentially identify patients at risk for disease progression. However, in clinical practice, compliance measurements are prohibitively invasive for use as a routine monitoring tool.Purpose. We propose a novel method for computing dynamic lung compliance imaging (LCI) from non-contrast computed tomography (CT) scans. LCI applies image processing methods to free-breathing 4DCT images, acquired under two different continuous positive airway pressures (CPAP) applied using a full-face mask, in order to compute the lung volume change induced by the pressure change. LCI provides a quantitative volumetric map of lung stiffness.Methods. We compared mean LCI values computed for 10 patients with idiopathic pulmonary fibrosis (IPF) and 7 non-IPF patients who were screened for lung nodules. 4DCTs were acquired for each patient at 5 cm and 10 cm H20 CPAP, as the patients were free breathing at functional residual capacity. LCI was computed from the two 4DCTs. Mean LCI intensities, which represent relative voxel volume change induced by the change in CPAP pressure, were computed.Results.The mean LCI values for patients with IPF ranged between [0.0309, 0.1165], whereas the values ranged between [0.0704, 0.2185] for the lung nodule cohort. Two-sided Wilcoxon rank sum test indicated that the difference in medians is statistically significant (pvalue = 0.009) and that LCI -measured compliance is overall lower in the IPF patient cohort.Conclusion. There is considerable difference in LC scores between patients with IPF compared to controls. Future longitudinal studies should look for LC alterations in areas of lung prior to radiographic detection of fibrosis to further characterize LCI's potential utility as an image marker for disease progression.
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Affiliation(s)
- Girish B Nair
- Division of Pulmonary and Critical Care, Beaumont Health, OUWB School of Medicine, United States of America
| | - Sayf Al-Katib
- Department of Radiology and Molecular Imaging, Beaumont Health, OUWB School of Medicine, United States of America
| | - Robert Podolsky
- Division of Informatics & Biostatistics, Beaumont Research Institute, Beaumont Health, United States of America
| | - Thomas Quinn
- Department of Radiation Oncology, Beaumont Health, OUWB School of Medicine, United States of America
| | - Craig Stevens
- Department of Radiation Oncology, Beaumont Health, OUWB School of Medicine, United States of America
| | - Edward Castillo
- Department of Radiation Oncology, Beaumont Health, OUWB School of Medicine, United States of America.,Department of Biomedical Engineering, The University of Texas at Austin, United States of America
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13
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Tanaka R, Matsumoto I, Tamura M, Takata M, Yoshida S, Saito D, Tanaka Y, Inoue D, Ohkura N, Kasahara K. Dynamic chest radiography: clinical validation of ventilation and perfusion metrics derived from changes in radiographic lung density compared to nuclear medicine imaging. Quant Imaging Med Surg 2021; 11:4016-4027. [PMID: 34476186 DOI: 10.21037/qims-20-1217] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2020] [Accepted: 04/08/2021] [Indexed: 01/04/2023]
Abstract
Background Dynamic chest radiography (DCR) is a type of non-contrast-enhanced functional lung imaging with a dynamic flat-panel detector (FPD). This study aimed to assess the clinical significance of ventilation and perfusion metrics derived from changes in radiographic lung density on DCR in comparison to nuclear medicine imaging-derived metrics. Methods DCR images of 42 lung cancer patients were sequentially obtained during respiration using a dynamic FPD imaging system. For each subdivided lung region, the maximum change in the averaged pixel value (Δmax), i.e., lung density, due to respiration and cardiac function was calculated, and the percentage of Δmax relative to the total of all lung regions (Δmax%) was computed for ventilation and perfusion, respectively. The Δmax% was compared to the accumulation of radioactive agents such as Tc-99m gas and Tc-99m macro-aggregated albumin (radioactive agents%) on ventilation and perfusion scans in the subdivided lung regions, by Spearman's correlation coefficient (r) and the Dice similarity coefficients (DSC). To facilitate visual evaluation, Δmax% was visualized as a color scaling, where larger Δmax values were indicated by higher color intensities. Results We found a moderate correlation between Δmax% and radioactive agents% on ventilation and perfusion scans, with perfusion metrics (r=0.57, P<0.001) showing a higher correlation than ventilation metrics (r=0.53, P<0.001). We also found a good or strong correlation (r≥0.5) in 80.9% (34/42) of patients for perfusion metrics (r=0.60±0.16) and in 52.4% (22/42) of patients for ventilation metrics (r=0.53±0.16). DSC indicated a moderate correlation for both metrics. Decreased pulmonary function was observed in the form of reduced color intensities on color-mapping images. Conclusions DCR-derived ventilation and perfusion metrics correlated reasonably well with nuclear medicine imaging findings in lung subdivisions, suggesting that DCR could provide useful information on pulmonary function without the use of radioactive contrast agents.
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Affiliation(s)
- Rie Tanaka
- College of Medical, Pharmaceutical & Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan
| | - Isao Matsumoto
- Department of Thoracic Surgery, Kanazawa University, Kanazawa, Ishikawa, Japan
| | - Masaya Tamura
- Department of Thoracic Surgery, Kanazawa University, Kanazawa, Ishikawa, Japan
| | - Munehisa Takata
- Department of Thoracic Surgery, Kanazawa University, Kanazawa, Ishikawa, Japan
| | - Shuhei Yoshida
- Department of Thoracic Surgery, Kanazawa University, Kanazawa, Ishikawa, Japan
| | - Daisuke Saito
- Department of Thoracic Surgery, Kanazawa University, Kanazawa, Ishikawa, Japan
| | - Yusuke Tanaka
- Department of Thoracic Surgery, Kanazawa University, Kanazawa, Ishikawa, Japan
| | - Dai Inoue
- Department of Radiology, Kanazawa University Hospital, Kanazawa, Ishikawa, Japan
| | - Noriyuki Ohkura
- Department of Respiratory Medicine, Kanazawa University Hospital, Kanazawa, Ishikawa, Japan
| | - Kazuo Kasahara
- Department of Respiratory Medicine, Kanazawa University Hospital, Kanazawa, Ishikawa, Japan
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14
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Low DA, O'Connell D, Lauria M, Stiehl B, Naumann L, Lee P, Hegde J, Barjaktarevic I, Goldin J, Santhanam A. Ventilation measurements using fast-helical free-breathing computed tomography. Med Phys 2021; 48:6094-6105. [PMID: 34410014 DOI: 10.1002/mp.15173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2021] [Revised: 07/28/2021] [Accepted: 08/01/2021] [Indexed: 11/10/2022] Open
Abstract
PURPOSE To examine the use of multiple fast-helical free breathing computed tomography (FHFBCT) scans for ventilation measurement. METHODS Ten patients were scanned 25 times in alternating directions using a FHFBCT protocol. Simultaneously, an abdominal pneumatic bellows was used as a real-time breathing surrogate. Regions-of-interest (ROIs) were selected from the upper right lungs of each patient for analysis. The ROIs were first registered using a published registration technique (pTV). A subsequent follow-up registration employed an objective function with two terms, a ventilation-adjusted Hounsfield Unit difference and a conservation-of-mass term labeled ΔΓ that denoted the difference between the deformation Jacobian and the tissue density ratio. The ventilations were calculated voxel-by-voxel as the slope of a first-order fit of the Jacobian as a function of the breathing amplitude. RESULTS The ventilations of the 10 patients showed different patterns and magnitudes. The average ventilation calculated from the deformation vector fields (DVFs) of the pTV and secondary registration was nearly identical, but the standard deviation of the voxel-to-voxel differences was approximately 0.1. The mean of the 90th percentile values of ΔΓ was reduced from 0.153 to 0.079 between the pTV and secondary registration, implying first that the secondary registration improved the conservation-of-mass criterion by almost 50% and that on average the correspondence between the Jacobian and density ratios as demonstrated by ΔΓ was less than 0.1. This improvement occurred in spite of the average of the 90th percentile changes in the DVF magnitudes being only 0.58 mm. CONCLUSIONS This work introduces the use of multiple free-breathing CT scans for free-breathing ventilation measurements. The approach has some benefits over the traditional use of 4-dimensional CT (4DCT) or breath-hold scans. The benefit over 4DCT is that FHFBCT does not have sorting artifacts. The benefits over breath-hold scans include the relatively small motion induced by quiet respiration versus deep-inspiration breath hold and the potential for characterizing dynamic breathing processes that disappear during breath hold.
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Affiliation(s)
- Daniel A Low
- Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, California, USA
| | - Dylan O'Connell
- Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, California, USA
| | - Michael Lauria
- Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, California, USA
| | - Bradley Stiehl
- Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, California, USA
| | - Louise Naumann
- Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, California, USA
| | - Percy Lee
- Department of Radiation Oncology, The University of Texas M.D. Anderson Cancer Center, Houston, Texas, USA
| | - John Hegde
- Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, California, USA
| | - Igor Barjaktarevic
- Department of Medicine, University of California, Los Angeles, Los Angeles, California, USA
| | - Jonathan Goldin
- Department of Radiology, University of California, Los Angeles, Los Angeles, California, USA
| | - Anand Santhanam
- Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, California, USA
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15
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Chang Y, Jiang Z, Segars WP, Zhang Z, Lafata K, Cai J, Yin FF, Ren L. A generative adversarial network (GAN)-based technique for synthesizing realistic respiratory motion in the extended cardiac-torso (XCAT) phantoms. Phys Med Biol 2021; 66. [PMID: 34061044 DOI: 10.1088/1361-6560/ac01b4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2020] [Accepted: 05/14/2021] [Indexed: 11/12/2022]
Abstract
Objective. Synthesize realistic and controllable respiratory motions in the extended cardiac-torso (XCAT) phantoms by developing a generative adversarial network (GAN)-based deep learning technique.Methods. A motion generation model was developed using bicycle-GAN with a novel 4D generator. Input with the end-of-inhale (EOI) phase images and a Gaussian perturbation, the model generates inter-phase deformable-vector-fields (DVFs), which were composed and applied to the input to generate 4D images. The model was trained and validated using 71 4D-CT images from lung cancer patients and then applied to the XCAT EOI images to generate 4D-XCAT with realistic respiratory motions. A separate respiratory motion amplitude control model was built using decision tree regression to predict the input perturbation needed for a specific motion amplitude, and this model was developed using 300 4D-XCAT generated from 6 XCAT phantom sizes with 50 different perturbations for each size. In both patient and phantom studies, Dice coefficients for lungs and lung volume variation during respiration were compared between the simulated images and reference images. The generated DVF was evaluated by deformation energy. DVFs and ventilation maps of the simulated 4D-CT were compared with the reference 4D-CTs using cross correlation and Spearman's correlation. Comparison of DVFs and ventilation maps among the original 4D-XCAT, the generated 4D-XCAT, and reference patient 4D-CTs were made to show the improvement of motion realism by the model. The amplitude control error was calculated.Results. Comparing the simulated and reference 4D-CTs, the maximum deviation of lung volume during respiration was 5.8%, and the Dice coefficient reached at least 0.95 for lungs. The generated DVFs presented comparable deformation energy levels. The cross correlation of DVFs achieved 0.89 ± 0.10/0.86 ± 0.12/0.95 ± 0.04 along thex/y/zdirection in the testing group. The cross correlation of ventilation maps derived achieved 0.80 ± 0.05/0.67 ± 0.09/0.68 ± 0.13, and the Spearman's correlation achieved 0.70 ± 0.05/0, 60 ± 0.09/0.53 ± 0.01, respectively, in the training/validation/testing groups. The generated 4D-XCAT phantoms presented similar deformation energy as patient data while maintained the lung volumes of the original XCAT phantom (Dice = 0.95, maximum lung volume variation = 4%). The motion amplitude control models controlled the motion amplitude control error to be less than 0.5 mm.Conclusions. The results demonstrated the feasibility of synthesizing realistic controllable respiratory motion in the XCAT phantom using the proposed method. This crucial development enhances the value of XCAT phantoms for various 4D imaging and therapy studies.
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Affiliation(s)
- Yushi Chang
- Department of Radiation Oncology, Duke University Medical Center, Durham, NC,United States of America.,Medical Physics Graduate Program, Duke University Durham, NC, United States of America
| | - Zhuoran Jiang
- Department of Radiation Oncology, Duke University Medical Center, Durham, NC,United States of America
| | - William Paul Segars
- Medical Physics Graduate Program, Duke University Durham, NC, United States of America.,Department of Radiology, Duke University Medical Center, Durham, NC, United States of America.,Carl E. Ravin Advanced Imaging Laboratories, Duke University, Durham, NC, United States of America
| | - Zeyu Zhang
- Department of Radiation Oncology, Duke University Medical Center, Durham, NC,United States of America.,Medical Physics Graduate Program, Duke University Durham, NC, United States of America
| | - Kyle Lafata
- Department of Radiation Oncology, Duke University Medical Center, Durham, NC,United States of America
| | - Jing Cai
- Hong Kong Polytechnic University, Hong Kong, HK, CN, Hong Kong, People's Republic of China
| | - Fang-Fang Yin
- Department of Radiation Oncology, Duke University Medical Center, Durham, NC,United States of America.,Medical Physics Graduate Program, Duke University Durham, NC, United States of America
| | - Lei Ren
- School of Medicine, University of Maryland, Baltimore, MD, United States of America
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Fujita Y, Kent M, Wisner E, Johnson L, Stern J, Qi L, Boone J, Yamamoto T. Combined Assessment of Pulmonary Ventilation and Perfusion with Single-Energy Computed Tomography and Image Processing. Acad Radiol 2021; 28:636-646. [PMID: 32534966 DOI: 10.1016/j.acra.2020.04.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Revised: 04/03/2020] [Accepted: 04/04/2020] [Indexed: 10/24/2022]
Abstract
RATIONALE AND OBJECTIVES To establish a proof-of-principle for combined assessment of pulmonary ventilation and perfusion using single-energy computed tomography (CT) and image processing/analysis (denoted as single-energy CT ventilation/perfusion imaging). MATERIALS AND METHODS Breath-hold CT scans were acquired at end-expiration and end-inspiration before injection of iodinated contrast agents, and repeated at end-inspiration after contrast injection for 17 canines (8 normal and 9 diseased lung subjects). Ventilation images were calculated with deformable image registration to map the end-expiratory and end-inspiratory CT images and quantitative analysis for regional volume changes as surrogates for ventilation. Perfusion images were calculated by subtracting the end-inspiratory precontrast CT from the deformably registered end-inspiratory postcontrast CT, yielding a map of regional Hounsfield unit enhancement as a surrogate for perfusion. Ventilation-perfusion matching, spatial heterogeneity, and gravitationally directed gradients were compared between two groups using a Wilcoxon rank-sum test. RESULTS The normal group had significantly higher Dice similarity coefficients for spatial overlap of segmented functional volumes between ventilation and perfusion (median 0.40 vs. 0.33, p = 0.05), suggesting stronger ventilation-perfusion matching. The normal group also had greater Spearman's correlation coefficients based on 16 regions of interest (median 0.58 vs. 0.40, p = 0.09). The coefficients of variation were comparable (median, ventilation 0.71 vs. 0.91, p = 0.60; perfusion 0.63 vs. 0.75, p = 0.27). The linear regression slopes of gravitationally directed gradient were also comparable for ventilation (median, ventilation -0.26 vs. -0.18, p = 0.19; perfusion -0.17 vs. -0.06, p = 0.11). CONCLUSION These findings provide proof-of-principle for single-energy CT ventilation/perfusion imaging.
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Castillo E, Nair G, Turner-Lawrence D, Myziuk N, Emerson S, Al-Katib S, Westergaard S, Castillo R, Vinogradskiy Y, Quinn T, Guerrero T, Stevens C. Quantifying pulmonary perfusion from noncontrast computed tomography. Med Phys 2021; 48:1804-1814. [PMID: 33608933 PMCID: PMC8252085 DOI: 10.1002/mp.14792] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Revised: 01/14/2021] [Accepted: 02/08/2021] [Indexed: 11/29/2022] Open
Abstract
Purpose Computed tomography (CT)‐derived ventilation methods compute respiratory induced volume changes as a surrogate for pulmonary ventilation. Currently, there are no known methods to derive perfusion information from noncontrast CT. We introduce a novel CT‐Perfusion (CT‐P) method for computing the magnitude mass changes apparent on dynamic noncontrast CT as a surrogate for pulmonary perfusion. Methods CT‐Perfusion is based on a mass conservation model which describes the unknown mass change as a linear combination of spatially corresponding inhale and exhale HU estimated voxel densities. CT‐P requires a deformable image registration (DIR) between the inhale/exhale lung CT pair, a preprocessing lung volume segmentation, and an estimate for the Jacobian of the DIR transformation. Given this information, the CT‐P image, which provides the magnitude mass change for each voxel within the lung volume, is formulated as the solution to a constrained linear least squares problem defined by a series of subregional mean magnitude mass change measurements. Similar to previous robust CT‐ventilation methods, the amount of uncertainty in a subregional sample mean measurement is related to measurement resolution and can be characterized with respect to a tolerance parameter τ. Spatial Spearman correlation between single photon emission CT perfusion (SPECT‐P) and the proposed CT‐P method was assessed in two patient cohorts via a parameter sweep of τ. The first cohort was comprised of 15 patients diagnosed with pulmonary embolism (PE) who had SPECT‐P and 4DCT imaging acquired within 24 h of PE diagnosis. The second cohort was comprised of 15 nonsmall cell lung cancer patients who had SPECT‐P and 4DCT images acquired prior to radiotherapy. For each test case, CT‐P images were computed for 30 different uncertainty parameter values, uniformly sampled from the range [0.01, 0.125], and the Spearman correlation between the SPECT‐P and the resulting CT‐P images were computed. Results The median correlations between CT‐P and SPECT‐P taken over all 30 test cases ranged between 0.49 and 0.57 across the parameter sweep. For the optimal tolerance τ = 0.0385, the CT‐P and SPECT‐P correlations across all 30 test cases ranged between 0.02 and 0.82. A one‐sample sign test was applied separately to the PE and lung cancer cohorts. A low Spearmen correlation of 15% was set as the null median value and two‐sided alternative was tested. The PE patients showed a median correlation of 0.57 (IQR = 0.305). One‐sample sign test was statistically significant with 96.5 % confidence interval: 0.20–0.63, P < 0.00001. Lung cancer patients had a median correlation of 0.57(IQR = 0.230). Again, a one‐sample sign test for median was statistically significant with 96.5 percent confidence interval: 0.45–0.71, P < 0.00001. Conclusion CT‐Perfusion is the first mechanistic model designed to quantify magnitude blood mass changes on noncontrast dynamic CT as a surrogate for pulmonary perfusion. While the reported correlations with SPECT‐P are promising, further investigation is required to determine the optimal CT acquisition protocol and numerical method implementation for CT‐P imaging.
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Affiliation(s)
- Edward Castillo
- Department of Radiation Oncology, Beaumont Health, Royal Oak, MI, USA.,Department of Computational and Applied Mathematics, Rice University, Houston, TX, USA
| | - Girish Nair
- Department of Internal Medicine, Beaumont Health, Royal Oak, MI, USA
| | | | - Nicholas Myziuk
- Department of Radiation Oncology, Beaumont Health, Royal Oak, MI, USA
| | - Scott Emerson
- Department of Diagnostic Radiology, Beaumont Health, Royal Oak, MI, USA
| | - Sayf Al-Katib
- Department of Diagnostic Radiology, Beaumont Health, Royal Oak, MI, USA
| | - Sarah Westergaard
- Department of Radiation Oncology, Emory University, Atlanta, GA, USA
| | - Richard Castillo
- Department of Radiation Oncology, Emory University, Atlanta, GA, USA
| | | | - Thomas Quinn
- Department of Radiation Oncology, Beaumont Health, Royal Oak, MI, USA
| | - Thomas Guerrero
- Department of Radiation Oncology, Beaumont Health, Royal Oak, MI, USA
| | - Craig Stevens
- Department of Radiation Oncology, Beaumont Health, Royal Oak, MI, USA
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18
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Nair GB, Galban CJ, Al-Katib S, Podolsky R, van den Berge M, Stevens C, Castillo E. An assessment of the correlation between robust CT-derived ventilation and pulmonary function test in a cohort with no respiratory symptoms. Br J Radiol 2020; 94:20201218. [PMID: 33320729 DOI: 10.1259/bjr.20201218] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
Abstract
OBJECTIVE To evaluate CT-ventilation imaging (CTVI) within a well-characterized, healthy cohort with no respiratory symptoms and examine the correlation between CTVI and concurrent pulmonary function test (PFT). METHODS CT scans and PFTs from 77 Caucasian participants in the NORM dataset (clinicaltrials.gov NCT00848406) were analyzed. CTVI was generated using the robust Integrated Jacobian Formulation (IJF) method. IJF estimated total lung capacity (TLC) was computed from CTVI. Bias-adjusted Pearson's correlation between PFT and IJF-based TLC was computed. RESULTS IJF- and PFT-measured TLC showed a good correlation for both males and females [males: 0.657, 95% CI (0.438-0.797); females: 0.667, 95% CI (0.416-0.817)]. When adjusting for age, height, smoking, and abnormal CT scan, correlation moderated [males: 0.432, 95% CI (0.129-0.655); females: 0.540, 95% CI (0.207-0.753)]. Visual inspection of CTVI revealed participants who had functional defects, despite the fact that all participant had normal high-resolution CT scan. CONCLUSION In this study, we demonstrate that IJF computed CTVI has good correlation with concurrent PFT in a well-validated patient cohort with no respiratory symptoms. ADVANCES IN KNOWLEDGE IJF-computed CTVI's overall numerical robustness and consistency with PFT support its potential as a method for providing spatiotemporal assessment of high and low function areas on volumetric non-contrast CT scan.
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Affiliation(s)
- Girish B Nair
- Division of Pulmonary and Critical Care, Beaumont Health, OUWB School of Medicine, Auburn Hills, MI, USA
| | - Craig J Galban
- Department of Radiology, University of Michigan, Ann Arbor, MI, USA
| | - Sayf Al-Katib
- Department of Radiology and Molecular Imaging, Beaumont Health, OUWB School of Medicine, Auburn Hills, MI, USA
| | - Robert Podolsky
- Division of Informatics & Biostatistics, Beaumont Research Institute, Beaumont Health, Beaumont, TX, USA
| | - Maarten van den Berge
- Department of Pulmonary Disease, University Medical Center Groningen, Groningen, The Netherlands
| | - Craig Stevens
- Department of Radiation Oncology, Beaumont Health, OUWB School of Medicine, Auburn Hills, MI, USA
| | - Edward Castillo
- Department of Radiation Oncology, Beaumont Health, OUWB School of Medicine, Auburn Hills, MI, USA.,Department of Computational and Applied Mathematics, Rice University, Houston, TX, USA
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Castillo E, Castillo R, Vinogradskiy Y, Nair G, Grills I, Guerrero T, Stevens C. Technical Note: On the spatial correlation between robust CT-ventilation methods and SPECT ventilation. Med Phys 2020; 47:5731-5738. [PMID: 33007118 PMCID: PMC7727923 DOI: 10.1002/mp.14511] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2020] [Revised: 08/03/2020] [Accepted: 09/21/2020] [Indexed: 11/18/2022] Open
Abstract
Purpose The computed tomography (CT)‐derived ventilation imaging methodology employs deformable image registration (DIR) to recover respiratory motion‐induced volume changes from an inhale/exhale CT image pair, as a surrogate for ventilation. The Integrated Jacobian Formulation (IJF) and Mass Conserving Volume Change (MCVC) numerical methods for volume change estimation represent two classes of ventilation methods, namely transformation based and intensity (Hounsfield Unit) based, respectively. Both the IJF and MCVC methods utilize subregional volume change measurements that satisfy a specified uncertainty tolerance. In previous publications, the ventilation images resulting from this numerical strategy demonstrated robustness to DIR variations. However, the reduced measurement uncertainty comes at the expense of measurement resolution. The purpose of this study was to examine the spatial correlation between robust CT‐ventilation images and single photon emission CT‐ventilation (SPECT‐V). Methods Previously described implementations of IJF and MCVC require the solution of a large scale, constrained linear least squares problem defined by a series of robust subregional volume change measurements. We introduce a simpler parameterized implementation that reduces the number of unknowns while increasing the number of data points in the resulting least squares problem. A parameter sweep of the measurement uncertainty tolerance, τ, was conducted using the 4DCT and SPECT‐V images acquired for 15 non‐small cell lung cancer patients prior to radiotherapy. For each test case, MCVC and IJF CT‐ventilation images were created for 30 different uncertainty parameter values, uniformly sampled from the range 0.01,0.25. Voxel‐wise Spearman correlation between the SPECT‐V and the resulting CT‐ventilation images was computed. Results The median correlations between MCVC and SPECT‐V ranged from 0.20 to 0.48 across the parameter sweep, while the median correlations for IJF and SPECT‐V ranged between 0.79 and 0.82. For the optimal IJF tolerance τ=0.07, the IJF and SPECT‐V correlations across all 15 test cases ranged between 0.12 and 0.90. For the optimal MCVC tolerance τ=0.03, the MCVC and SPECT‐V correlations across all 15 test cases ranged between −0.06 and 0.84. Conclusion The reported correlations indicate that robust methods generate ventilation images that are spatially consistent with SPECT‐V, with the transformation‐based IJF method yielding higher correlations than those previously reported in the literature. For both methods, overall correlations were found to marginally vary for τ∈[0.03,0.15], indicating that the clinical utility of both methods is robust to both uncertainty tolerance and DIR solution.
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Affiliation(s)
- Edward Castillo
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA.,Department of Computational and Applied Mathematics, Rice University, Houston, TX, USA
| | - Richard Castillo
- Department of Radiation Oncology, Emory University, Atlanta, GA, USA
| | | | - Girish Nair
- Department of Internal Medicine, Beaumont Health Systems, Royal Oak, MI, USA
| | - Inga Grills
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA
| | - Thomas Guerrero
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA
| | - Craig Stevens
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA
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20
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Shao W, Patton TJ, Gerard SE, Pan Y, Reinhardt JM, Durumeric OC, Bayouth JE, Christensen GE. N-Phase Local Expansion Ratio for Characterizing Out-of-Phase Lung Ventilation. IEEE TRANSACTIONS ON MEDICAL IMAGING 2020; 39:2025-2034. [PMID: 31899418 PMCID: PMC7316305 DOI: 10.1109/tmi.2019.2963083] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Out-of-phase ventilation occurs when local regions of the lung reach their maximum or minimum volumes at breathing phases other than the global end inhalation or exhalation phases. This paper presents the N-phase local expansion ratio (LER N ) as a surrogate for lung ventilation. A common approach to estimate lung ventilation is to use image registration to align the end exhalation and inhalation 3DCT images and then analyze the resulting correspondence map. This 2-phase local expansion ratio (LER2) is limited because it ignores out-of-phase ventilation and thus may underestimate local lung ventilation. To overcome this limitation, LER N measures the maximum ratio of local expansion and contraction over the entire breathing cycle. Comparing LER2 to LER N provides a means for detecting and characterizing locations of the lung that experience out-of-phase ventilation. We present a novel in-phase/out-of-phase ventilation (IOV) function plot to visualize and measure the amount of high-function IOV that occurs during a breathing cycle. Treatment planning 4DCT scans collected during coached breathing from 32 human subjects with lung cancer were analyzed in this study. Results show that out-of-phase breathing occurred in all subjects and that the spatial distribution of out-of-phase ventilation varied from subject to subject. For the 32 subjects analyzed, 50% of the out-of-phase regions on average were mislabeled as low-function by LER2 (high-function threshold of 1.1, IOV threshold of 1.05). 4DCT and Xenon-enhanced CT of four sheep showed that LER8 is more accurate than LER2 for measuring lung ventilation.
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Nakajima Y, Kadoya N, Kimura T, Hioki K, Jingu K, Yamamoto T. Variations Between Dose-Ventilation and Dose-Perfusion Metrics in Radiation Therapy Planning for Lung Cancer. Adv Radiat Oncol 2020; 5:459-465. [PMID: 32529141 PMCID: PMC7280081 DOI: 10.1016/j.adro.2020.03.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2019] [Revised: 02/20/2020] [Accepted: 03/05/2020] [Indexed: 12/25/2022] Open
Abstract
Purpose Currently, several active clinical trials of functional lung avoidance radiation therapy using different imaging modalities for ventilation or perfusion are underway. Patients with lung cancer often show ventilation-perfusion mismatch, whereas the significance of dose-function metric remains unclear. The aim of the present study was to compare dose-ventilation metrics with dose-perfusion metrics for radiation therapy plan evaluation. Methods and Materials Pretreatment 4-dimensional computed tomography and 99mTc-macroaggregated albumin single-photon emission computed tomography perfusion images of 60 patients with lung cancer treated with radiation therapy were analyzed. Ventilation images were created using the deformable image registration of 4-dimensional computed tomography image sets and image analysis for regional volume changes as a surrogate for ventilation. Ventilation and perfusion images were converted into percentile distribution images. Analyses included Pearson’s correlation coefficient and comparison of agreements between the following dose-ventilation and dose-perfusion metrics: functional mean lung dose and functional percent lung function receiving 5, 10, 20, 30, and 40 Gy (fV5, fV10, fV20, fV30, and fV40, respectively). Results Overall, the dose-ventilation metrics were greater than the dose-perfusion metrics (ie, fV20, 26.3% ± 9.9% vs 23.9% ± 9.8%). Correlations between the dose-ventilation and dose-perfusion metrics were strong (range, r = 0.94-0.97), whereas the agreements widely varied among patients, with differences as large as 6.6 Gy for functional mean lung dose and 11.1% for fV20. Paired t test indicated that the dose-ventilation and dose-perfusion metrics were significantly different. Conclusions Strong correlations were present between the dose-ventilation and dose-perfusion metrics. However, the agreement between the dose-ventilation and dose-perfusion metrics widely varied among patients, suggesting that ventilation-based radiation therapy plan evaluation may not be comparable to that based on perfusion. Future studies should elucidate the correlation of dose-function metrics with clinical pulmonary toxicity metrics.
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Affiliation(s)
- Yujiro Nakajima
- Department of Radiation Oncology, Tokyo Metropolitan Cancer and Infectious Diseases Center Komagome Hospital, Tokyo, Japan.,Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Noriyuki Kadoya
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Tomoki Kimura
- Department of Radiation Oncology, Hiroshima University Graduate School of Biomedical Sciences, Hiroshima, Japan
| | - Kazunari Hioki
- Department of Clinical Support, Hiroshima University Hospital, Hiroshima, Japan.,Graduate School of Health Science, Kumamoto University, Kumamoto, Japan
| | - Keiichi Jingu
- Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Tokihiro Yamamoto
- Department of Radiation Oncology, University of California Davis School of Medicine, Sacramento, California
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Liu Z, Miao J, Huang P, Wang W, Wang X, Zhai Y, Wang J, Zhou Z, Bi N, Tian Y, Dai J. A deep learning method for producing ventilation images from 4DCT: First comparison with technegas SPECT ventilation. Med Phys 2020; 47:1249-1257. [PMID: 31883382 DOI: 10.1002/mp.14004] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2019] [Revised: 12/13/2019] [Accepted: 12/23/2019] [Indexed: 01/19/2023] Open
Abstract
PURPOSE The purpose of this study is to develop a deep learning (DL) method for producing four-dimensional computed tomography (4DCT) ventilation imaging and to evaluate the accuracy of the DL-based ventilation imaging against single-photon emission-computed tomography (SPECT) ventilation imaging (SPECT-VI). The performance of the DL-based method is assessed by comparing with density change- and Jacobian-based (HU and JAC) methods. MATERIALS AND METHODS Fifty patients with esophagus or lung cancer who underwent thoracic radiotherapy were enrolled in this study. For each patient, 4DCT scans paired with 99mTc-Technegas SPECT/CT were acquired before the first radiotherapy treatment. 4DCT and SPECT/CT were first rigidly registered using MIMvista and converted to data matrix using MATLAB, and then transferred to a DL model based on U-net for correlating 4DCT features and SPECT-VI. Two forms of 4DCT dataset [(a) ten phases and (b) two phases of peak-exhalation and peak-inhalation] as input are studied. Tenfold cross-validation procedure was used to evaluate the performance of the DL model. For comparative evaluation, HU and JAC methodologies are used to calculate specific ventilation imaging based on 4DCT (CTVI) for each patient. The voxel-wise Spearman's correlation was evaluated over the whole lung between each of CTVI and corresponding SPECT-VI. The SPECT-VI and produced CTVIs were segmented into high, median, and low functional lung (HFL, MFL, and LFL) regions. The spatial overlap of corresponding HFL, MFL, and LFL for each CTVI against SPECT-VI was also evaluated using the dice similarity coefficient (DSC). The averaged DSC of functional lung regions was calculated and statistically analyzed with a one-factor ANONA model among different methods. RESULTS The voxel-wise Spearman rs values were (0.22 ± 0.31), (-0.09 ± 0.18), and (0.73 ± 0.16)/(0.71 ± 0.17) for the CTVIHU , CTVIJAC , and CTVIDL(1) /CTVIDL(2) . These results showed the DL method yielded the strongest correlation with SPECT-VI. Using the DSC as the spatial overlap metric, we found that the CTVIHU , CTVIJAC , and CTVIDL(1) /CTVIDL(2) methods achieved averaged DSC values for all patients to be (0.45 ± 0.08), (0.33 ± 0.04), and (0.73 ± 0.09)/(0.71 ± 0.09), respectively. The results demonstrated that the DL method yielded the highest similarity with SPECT-VI with the prominently significant difference (P < 10-7 ). CONCLUSIONS This study developed a DL method for producing CTVI and performed a validation against SPECT-VI. The results demonstrated that DL method can derive CTVI with greatly improved accuracy in comparison to HU and JAC methods. The produced ventilation images can be more accurate and useful for lung functional avoidance radiotherapy and treatment response modeling.
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Affiliation(s)
- Zhiqiang Liu
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
| | - Junjie Miao
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
| | - Peng Huang
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
| | - Wenqing Wang
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
| | - Xin Wang
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
| | - Yirui Zhai
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
| | - Jingbo Wang
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
| | - Zongmei Zhou
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
| | - Nan Bi
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
| | - Yuan Tian
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
| | - Jianrong Dai
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, 17 Panjiayuannanli, Chaoyang District, Beijing, 100021, China
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23
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Castillo E, Vinogradskiy Y, Castillo R. Robust HU-based CT ventilation from an integrated mass conservation formulation. Med Phys 2019; 46:5036-5046. [PMID: 31514235 PMCID: PMC6842051 DOI: 10.1002/mp.13817] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Revised: 06/26/2019] [Accepted: 08/20/2019] [Indexed: 11/07/2022] Open
Abstract
Computed tomography (CT) ventilation algorithms estimate volume changes induced by respiratory motion. Existing Hounsfield Unit (HU) methods approximate volume change from the measured HU variations between spatially corresponding voxel locations within a temporally resolved CT image pair, assuming that volume changes are caused solely by changes in air content. Numerical implementations require a deformable image registration to determine the inhale/exhale spatial correspondence, a preprocessing lung volume segmentation, a preprocessing high-intensity vessel segmentation, and a post-processing smoothing applied to the raw volume change estimates obtained for each lung tissue voxel. PURPOSE We introduce the novel mass-conserving volume change (MCVC) method for estimating voxel volume changes from the HU values within an inhale/exhale CT image pair. MCVC is based on subregional volume change estimates that possess quantitatively characterized and controllable levels of uncertainty. MCVC is therefore robust to small variations in DIR solutions and the resulting ventilation images are overall more reproducible. In contrast to existing HU methods, MCVC does not require a preprocessing lung vessel segmentation or pre/post-processing Gaussian smoothing. METHODS Subregional volume change estimates are defined in terms of mean density ratios. As such, the corresponding uncertainty is characterized using Gaussian statistics and standard error analysis of the sample density means. A numerical solution is obtained from the MCVC formulation by solving a constrained linear least squares problem defined by a series of subregional volume change estimates. Reproducibility of the MCVC method with respect to DIR solution was assessed using expert-determined landmark point pairs and inhale/exhale phases from 10 four-dimensional CTs (4DCTs) available on www.dir-lab.com. MCVC was also compared to the robust Integrated Jacobian Formulation (IJF), a transformation-based ventilation method. RESULTS The ten Dir-Lab 4DCT cases were registered twice with the same DIR algorithm, but using different degrees of freedom (DIR 1 and DIR 2). Standard HU ventilation (HUV) and MCVC ventilation images were computed for both solutions. The average spatial errors (300 landmarks per case) for DIR 1 ranged between 0.74 and 1.50 mm, whereas for DIR 2 they ranged between 0.68 and 1.18 mm. Despite the differences in spatial errors between the two DIR solutions, the average Pearson correlation between the corresponding HUV images was 0.94 (0.03), while for the MCVC images it was 1.00 (0.00). The average correlation between MCVC and IJF ventilation over the ten test cases was 0.81 (0.14), whereas for HUV and IJF it was 0.56 (1.11). CONCLUSION While HUV is robust to DIR solution, its implementation depends on heuristic Gaussian smoothing and vessel segmentation. MCVC is based on subregional volume change measurements with quantifiable and controllable levels of uncertainty. The subregional approach eliminates the need for Gaussian smoothing and lung vasculature segmentation. Numerical experiments are consistent with the underlying mathematical theory and indicate that MCVC ventilation is more reproducible with respect to DIR algorithm than standard HU methods. MCVC results are also more consistent with the robust IJF method, which suggests that incorporating robustness leads to more consistent results across both DIRs and ventilation algorithms.
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Affiliation(s)
- Edward Castillo
- Department of Radiation OncologyBeaumont Health SystemsRoyal OakMIUSA
- Department of Computational and Applied MathematicsRice UniversityHoustonTXUSA
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24
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Tian Y, Miao J, Liu Z, Huang P, Wang W, Wang X, Zhai Y, Wang J, Li M, Ma P, Zhang K, Yan H, Dai J. Availability of a simplified lung ventilation imaging algorithm based on four-dimensional computed tomography. Phys Med 2019; 65:53-58. [PMID: 31430587 DOI: 10.1016/j.ejmp.2019.08.006] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/18/2019] [Revised: 07/08/2019] [Accepted: 08/05/2019] [Indexed: 01/05/2023] Open
Abstract
PURPOSE It is still not conclusive which four-dimensional computed tomography (4DCT)-based ventilation imaging algorithm is most accurate and efficient. In this study, we proposed a simplified algorithm (VIAAVG) which only requires the average computed tomography (AVG CT) as input, and quantitatively compared its accuracy and efficiency with three other popular algorithms. MATERIAL AND METHODS Fifty patients with lung or esophageal cancer who underwent radiotherapy were enrolled. Single photon emission computed tomography (SPECT) ventilation images (VI-SPECT) and 4DCT were acquired 1-3 days before the first treatment session. The end of exhalation and the end of inhalation CT were registered to derive deformable vector field (DVF) using MIMvista. 4DCT-based ventilation images (CTVI) were first calculated respectively by means of four algorithms (VIAJAC, VIAHU, VIAPRO and VIAAVG). The computation times were compared using paired t-test. The corresponding CTVIs (CTVIJAC, CTVIHU, CTVIPRO and CTVIAVG) and VI-SPECT were segmented into three equal sub-volumes (high, medium and low function lung, respectively) after smoothing and normalization. The Dice Similarity Coefficients (DSCs) were calculated for each sub-volume between each CTVI and VI-SPECT. The average DSCs for high, medium and low function lung in different CTVIs for each patient were compared using paired t-test. RESULTS The mean DSCs for CTVIJAC, CTVIHU, CTVIPRO and CTVIAVG were 0.3255, 0.4465, 0.5865 and 0.5958, respectively. The average computation times for CTVIJAC, CTVIHU, CTVIPRO and CTVIAVG were 18.3 s, 24.2 s, 144.8 s and 15.0 s. CONCLUSION VIAAVG is available for clinical use because of its high accuracy, improved efficiency and less input requirement compared to the other algorithms.
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Affiliation(s)
- Yuan Tian
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Junjie Miao
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Zhiqiang Liu
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Peng Huang
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Wenqin Wang
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Xin Wang
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Yirui Zhai
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Jingbo Wang
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Minghui Li
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Pan Ma
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Ke Zhang
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Hui Yan
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China
| | - Jianrong Dai
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100021, China.
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Vinogradskiy Y. CT-based ventilation imaging in radiation oncology. BJR Open 2019; 1:20180035. [PMID: 33178925 PMCID: PMC7592480 DOI: 10.1259/bjro.20180035] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2018] [Revised: 01/28/2019] [Accepted: 03/11/2019] [Indexed: 11/06/2022] Open
Abstract
A form of lung function imaging is emerging that uses phase-resolved four-dimensional CT (4DCT or breath-hold CT) images along with image processing techniques to generate lung function maps that provide a surrogate of lung ventilation. CT-based ventilation (referred to as CT-ventilation) research has gained momentum in Radiation Oncology because many lung cancer patients undergo four-dimensional CT simulation as part of the standard treatment planning process. Therefore, generating CT-ventilation images provides functional information without burdening the patient with an extra imaging procedure. CT-ventilation has progressed from an image processing calculation methodology, to validation efforts, to retrospective demonstration of clinical utility in Radiation Oncology. In particular, CT-ventilation has been proposed for two main clinical applications: functional avoidance radiation therapy and thoracic dose-response assessment. The idea of functional avoidance radiation therapy is to preferentially spare functional portions of the lung (as measured by CT-ventilation) during radiation therapy with the hypothesis that reducing dose to functional portions of the lung will lead to reduced rates of radiation-related thoracic toxicity. The idea of imaging-based dose-response assessment is to evaluate pre- to post-treatment CT-ventilation-based imaging changes. The hypothesis is that early, imaging-change-based response can be an early predictor of subsequent thoracic toxicity. Based on the retrospective evidence, the clinical applications of CT-ventilation have progressed from the retrospective setting to on-going prospective clinical trials. This review will cover basic CT-ventilation calculation methodologies, validation efforts, presentation of clinical applications, summarize on-going clinical trials, review potential uncertainties and shortcomings of CT-ventilation, and discuss future directions of CT-ventilation research.
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Affiliation(s)
- Yevgeniy Vinogradskiy
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, CO
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Castillo E, Castillo R, Vinogradskiy Y, Dougherty M, Solis D, Myziuk N, Thompson A, Guerra R, Nair G, Guerrero T. Robust CT ventilation from the integral formulation of the Jacobian. Med Phys 2019; 46:2115-2125. [PMID: 30779353 PMCID: PMC6510605 DOI: 10.1002/mp.13453] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2018] [Revised: 01/03/2019] [Accepted: 02/12/2019] [Indexed: 11/18/2022] Open
Abstract
Computed tomography (CT) derived ventilation algorithms estimate the apparent voxel volume changes within an inhale/exhale CT image pair. Transformation‐based methods compute these estimates solely from the spatial transformation acquired by applying a deformable image registration (DIR) algorithm to the image pair. However, approaches based on finite difference approximations of the transformation's Jacobian have been shown to be numerically unstable. As a result, transformation‐based CT ventilation is poorly reproducible with respect to both DIR algorithm and CT acquisition method. Purpose We introduce a novel Integrated Jacobian Formulation (IJF) method for estimating voxel volume changes under a DIR‐recovered spatial transformation. The method is based on computing volume estimates of DIR mapped subregions using the hit‐or‐miss sampling algorithm for integral approximation. The novel approach allows for regional volume change estimates that (a) respect the resolution of the digital grid and (b) are based on approximations with quantitatively characterized and controllable levels of uncertainty. As such, the IJF method is designed to be robust to variations in DIR solutions and thus overall more reproducible. Methods Numerically, Jacobian estimates are recovered by solving a simple constrained linear least squares problem that guarantees the recovered global volume change is equal to the global volume change obtained from the inhale and exhale lung segmentation masks. Reproducibility of the IJF method with respect to DIR solution was assessed using the expert‐determined landmark point pairs and inhale/exhale phases from 10 four‐dimensional computed tomographies (4DCTs) available on http://www.dir-lab.com. Reproducibility with respect to CT acquisition was assessed on the 4DCT and 4D cone beam CT (4DCBCT) images acquired for five lung cancer patients prior to radiotherapy. Results The ten Dir‐Lab 4DCT cases were registered twice with the same DIR algorithm, but with different smoothing parameter. Finite difference Jacobian (FDJ) and IFJ images were computed for both solutions. The average spatial errors (300 landmarks per case) for the two DIR solution methods were 0.98 (1.10) and 1.02 (1.11). The average Pearson correlation between the FDJ images computed from the two DIR solutions was 0.83 (0.03), while for the IJF images it was 1.00 (0.00). For intermodality assessment, the IJF and FDJ images were computed from the 4DCT and 4DCBCT of five patients. The average Pearson correlation of the spatially aligned FDJ images was 0.27 (0.11), while it was 0.77 (0.13) for the IFJ method. Conclusion The mathematical theory underpinning the IJF method allows for the generation of ventilation images that are (a) computed with respect to DIR spatial accuracy on the digital voxel grid and (b) based on DIR‐measured subregional volume change estimates acquired with quantifiable and controllable levels of uncertainty. Analyses of the experiments are consistent with the mathematical theory and indicate that IJF ventilation imaging has a higher reproducibility with respect to both DIR algorithm and CT acquisition method, in comparison to the standard finite difference approach.
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Affiliation(s)
- Edward Castillo
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA.,Department of Computational and Applied Mathematics, Rice University, Houston, TX, USA
| | - Richard Castillo
- Department of Radiation Oncology, Emory University, Atlanta, GA, USA
| | | | | | - David Solis
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA
| | - Nicholas Myziuk
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA
| | - Andrew Thompson
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA
| | - Rudy Guerra
- Department of Statistics, Rice University, Houston, TX, USA
| | - Girish Nair
- Department of Internal Medicine, Beaumont Health Systems, Royal Oak, MI, USA
| | - Thomas Guerrero
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA
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Yamamoto T, Kabus S, Bal M, Bzdusek K, Keall PJ, Wright C, Benedict SH, Daly ME. Changes in Regional Ventilation During Treatment and Dosimetric Advantages of CT Ventilation Image Guided Radiation Therapy for Locally Advanced Lung Cancer. Int J Radiat Oncol Biol Phys 2018; 102:1366-1373. [PMID: 29891207 PMCID: PMC6443402 DOI: 10.1016/j.ijrobp.2018.04.063] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2017] [Accepted: 04/23/2018] [Indexed: 12/25/2022]
Abstract
PURPOSE Lung functional image guided radiation therapy (RT) that avoids irradiating highly functional regions has potential to reduce pulmonary toxicity following RT. Tumor regression during RT is common, leading to recovery of lung function. We hypothesized that computed tomography (CT) ventilation image-guided treatment planning reduces the functional lung dose compared to standard anatomic image-guided planning in 2 different scenarios with or without plan adaptation. METHODS AND MATERIALS CT scans were acquired before RT and during RT at 2 time points (16-20 Gy and 30-34 Gy) for 14 patients with locally advanced lung cancer. Ventilation images were calculated by deformable image registration of four-dimensional CT image data sets and image analysis. We created 4 treatment plans at each time point for each patient: functional adapted, anatomic adapted, functional unadapted, and anatomic unadapted plans. Adaptation was performed at 2 time points. Deformable image registration was used for accumulating dose and calculating a composite of dose-weighted ventilation used to quantify the lung accumulated dose-function metrics. The functional plans were compared with the anatomic plans for each scenario separately to investigate the hypothesis at a significance level of 0.05. RESULTS Tumor volume was significantly reduced by 20% after 16 to 20 Gy (P = .02) and by 32% after 30 to 34 Gy (P < .01) on average. In both scenarios, the lung accumulated dose-function metrics were significantly lower in the functional plans than in the anatomic plans without compromising target volume coverage and adherence to constraints to critical structures. For example, functional planning significantly reduced the functional mean lung dose by 5.0% (P < .01) compared to anatomic planning in the adapted scenario and by 3.6% (P = .03) in the unadapted scenario. CONCLUSIONS This study demonstrated significant reductions in the accumulated dose to the functional lung with CT ventilation image-guided planning compared to anatomic image-guided planning for patients showing tumor regression and changes in regional ventilation during RT.
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Affiliation(s)
- Tokihiro Yamamoto
- Department of Radiation Oncology, University of California Davis, Sacramento, California.
| | - Sven Kabus
- Department of Digital Imaging, Philips Research, Hamburg, Germany
| | | | | | - Paul J Keall
- Radiation Physics Laboratory, Sydney Medical School, University of Sydney, New South Wales, Australia
| | - Cari Wright
- Department of Radiation Oncology, University of California Davis, Sacramento, California
| | - Stanley H Benedict
- Department of Radiation Oncology, University of California Davis, Sacramento, California
| | - Megan E Daly
- Department of Radiation Oncology, University of California Davis, Sacramento, California
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Rankine LJ, Wang Z, Driehuys B, Marks LB, Kelsey CR, Das SK. Correlation of Regional Lung Ventilation and Gas Transfer to Red Blood Cells: Implications for Functional-Avoidance Radiation Therapy Planning. Int J Radiat Oncol Biol Phys 2018; 101:1113-1122. [PMID: 29907488 PMCID: PMC6689416 DOI: 10.1016/j.ijrobp.2018.04.017] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2017] [Revised: 03/02/2018] [Accepted: 04/05/2018] [Indexed: 02/08/2023]
Abstract
PURPOSE To investigate the degree to which lung ventilation and gas exchange are regionally correlated, using the emerging technology of hyperpolarized (HP)-129Xe magnetic resonance imaging (MRI). METHODS AND MATERIALS Hyperpolarized-129Xe MRI studies were performed on 17 institutional review board-approved human subjects, including 13 healthy volunteers, 1 emphysema patient, and 3 non-small cell lung cancer patients imaged before and approximately 11 weeks after radiation therapy (RT). Subjects inhaled 1 L of HP-129Xe mixture, followed by the acquisition of interleaved ventilation and gas exchange images, from which maps were obtained of the relative HP-129Xe distribution in three states: (1) gaseous, in lung airspaces; (2) dissolved interstitially, in alveolar barrier tissue; and (3) transferred to red blood cells (RBCs), in the capillary vasculature. The relative spatial distributions of HP-129Xe in airspaces (regional ventilation) and RBCs (regional gas transfer) were compared. Further, we investigated the degree to which ventilation and RBC transfer images identified similar functional regions of interest (ROIs) suitable for functionally guided RT. For the RT patients, both ventilation and RBC functional images were used to calculate differences in the lung dose-function histogram and functional effective uniform dose. RESULTS The correlation of ventilation and RBC transfer was ρ = 0.39 ± 0.15 in healthy volunteers. For the RT patients, this correlation was ρ = 0.53 ± 0.02 before treatment and ρ = 0.39 ± 0.07 after treatment; for the emphysema patient it was ρ = 0.24. Comparing functional ROIs, ventilation and RBC transfer demonstrated poor spatial agreement: Dice similarity coefficient = 0.50 ± 0.07 and 0.26 ± 0.12 for the highest-33%- and highest-10%-function ROIs in healthy volunteers, and in RT patients (before treatment) these were 0.58 ± 0.04 and 0.40 ± 0.04. The average magnitude of the differences between RBC- and ventilation-derived functional effective uniform dose, fV20Gy, fV10Gy, and fV5Gy were 1.5 ± 1.4 Gy, 4.1% ± 3.8%, 5.0% ± 3.8%, and 5.3% ± 3.9%, respectively. CONCLUSION Ventilation may not be an effective surrogate for true regional lung function for all patients.
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Affiliation(s)
- Leith J Rankine
- Department of Radiation Oncology, University of North Carolina School of Medicine, Chapel Hill, North Carolina; Medical Physics Graduate Program, Duke University, Durham, North Carolina.
| | - Ziyi Wang
- Department of Biomedical Engineering, Duke University, Durham, North Carolina
| | - Bastiaan Driehuys
- Medical Physics Graduate Program, Duke University, Durham, North Carolina; Department of Biomedical Engineering, Duke University, Durham, North Carolina; Radiology, Duke University, Durham, North Carolina
| | - Lawrence B Marks
- Department of Radiation Oncology, University of North Carolina School of Medicine, Chapel Hill, North Carolina
| | - Chris R Kelsey
- Department of Radiation Oncology, Duke University Medical Center, Durham, North Carolina
| | - Shiva K Das
- Department of Radiation Oncology, University of North Carolina School of Medicine, Chapel Hill, North Carolina
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Miyakawa S, Tachibana H, Moriya S, Kurosawa T, Nishio T, Sato M. Design and development of a nonrigid phantom for the quantitative evaluation of DIR-based mapping of simulated pulmonary ventilation. Med Phys 2018; 45:3496-3505. [PMID: 29807393 DOI: 10.1002/mp.13017] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2016] [Revised: 05/16/2018] [Accepted: 05/16/2018] [Indexed: 12/25/2022] Open
Abstract
PURPOSE The validation of deformable image registration (DIR)-based pulmonary ventilation mapping is time consuming and prone to inaccuracies and is also affected by deformation parameters. In this study, we developed a nonrigid phantom as a quality assurance (QA) tool that simulates ventilation to evaluate DIR-based images quantitatively. METHODS The phantom consists of an acrylic cylinder filled with polyurethane foam designed to simulate pulmonic alveoli. A polyurethane membrane is attached to the inferior end of the phantom to simulate the diaphragm. In addition, tracheobronchial-tree-shaped polyurethane tubes are inserted through the foam and converge outside the phantom to simulate the trachea. Solid polyurethane is also used to model arteries, which closely follow the model airways. Two three-dimensional (3D) CT scans were performed during exhalation and inhalation phases using xenon (Xe) gas as the inhaled contrast agent. The exhalation 3D-CT image is deformed to an inhalation 3D-CT image using our in-house program based on the NiftyReg open-source package. The target registration error (TRE) between the two images was calculated for 16 landmarks located in the simulated lung volume. The DIR-based ventilation image was generated using Jacobian determinant (JD) metrics. Subsequently, differences in the Hounsfield unit (HU) values between the two images were measured. The correlation coefficient between the JD and HU differences was calculated. In addition, three 4D-CT scans are performed to evaluate the reproducibility of the phantom motion and Xe gas distribution. RESULTS The phantom exhibited a variety of displacements for each landmark (range: 1-20 mm). The reproducibility analysis indicated that the location differences were <1 mm for all landmarks, and the HU variation in the Xe gas distribution was close to zero. The mean TRE in the evaluation of spatial accuracy according to the DIR software was 1.47 ± 0.71 mm (maximum: 2.6 mm). The relationship between the JD and HU differences had a large correlation (R = -0.71) for the DIR software. CONCLUSION The phantom implemented new features, namely, deformation and simulated ventilation. To assess the accuracy of the DIR-based mapping of the simulated pulmonary ventilation, the phantom allows for simulation of Xe gas wash-in and wash-out. The phantom may be an effective QA tool, because the DIR algorithm can be quickly changed and its accuracy evaluated with a high degree of precision.
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Affiliation(s)
- Shin Miyakawa
- Department of Medical Physics, Graduate School of Medicine, Tokyo Women's Medical University, Tokyo, 162-8666, Japan
- Radiological Sciences, Graduate Division of Health Sciences, Komazawa University, Tokyo, 154-8525, Japan
| | - Hidenobu Tachibana
- Particle Therapy Division, Research Center for Innovative Oncology, National Cancer Center, Chiba, 277-8577, Japan
| | - Shunsuke Moriya
- Doctoral Program in Biomedical Sciences, Graduate School of Comprehensive Human Sciences, University of Tsukuba, Chiba, 305-8577, Japan
| | - Tomoyuki Kurosawa
- Department of Medical Physics, Graduate School of Medicine, Tokyo Women's Medical University, Tokyo, 162-8666, Japan
- Radiological Sciences, Graduate Division of Health Sciences, Komazawa University, Tokyo, 154-8525, Japan
| | - Teiji Nishio
- Department of Medical Physics, Graduate School of Medicine, Tokyo Women's Medical University, Tokyo, 162-8666, Japan
| | - Masanori Sato
- Radiological Sciences, Graduate Division of Health Sciences, Komazawa University, Tokyo, 154-8525, Japan
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Yamamoto T, Kabus S. Technical Note: Correction for the effect of breathing variations in CT pulmonary ventilation imaging. Med Phys 2017; 45:322-327. [PMID: 29072320 DOI: 10.1002/mp.12634] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Revised: 10/16/2017] [Accepted: 10/17/2017] [Indexed: 11/12/2022] Open
Abstract
PURPOSE The accuracy and precision of computed tomography (CT) pulmonary ventilation imaging with conventional CT scanners are limited by breathing variations. We propose a method to correct for the effect of breathing variations in CT ventilation imaging based on external respiratory signals acquired throughout a scan. METHODS The proposed method is based on: (a) calculating voxel-by-voxel abdominal surface motion ranges using four-dimensional (4D) CT image datasets spatiotemporally correlated with external respiratory monitor data, and (b) applying the correction factor, which is defined as the ratio of the overall mean of the abdominal surface motion range in the lungs to that of each voxel, to the CT ventilation value. The performance of the proposed method was investigated by comparing voxel-wise correlations of the uncorrected and corrected CT ventilation images with single-photon emission CT (SPECT) ventilation images as a ground truth for nine patients. CT ventilation images were calculated by deformable image registration of the 4D-CT image datasets, followed by calculation of regional volume changes. A Steiger's Z-test was used to determine the statistical significance of the difference between the correlations for the uncorrected and corrected CT ventilation images. RESULTS The proposed correction method resulted in significant increases (P < 0.05) in the correlation between CT and SPECT ventilation in three patients, trends toward significant increase (P: 0.13-0.18) in two patients, no significant differences in three patients, and a significantly decreased correlation in one patient. The average standard deviation of the abdominal surface motion range in three patients showing significant increases was 0.27 (range 0.10-0.37), which was greater than 0.17 (range 0.07-0.38) in the other six patients. CONCLUSIONS The proposed method to correct for the effect of breathing variations could be readily implemented and has the potential to improve the accuracy of CT ventilation imaging as demonstrated in a nine-patient study.
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Affiliation(s)
- Tokihiro Yamamoto
- Department of Radiation Oncology, University of California Davis School of Medicine, Sacramento, CA, 95817, USA
| | - Sven Kabus
- Department of Digital Imaging, Philips Research, 22335, Hamburg, Germany
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Wilms M, Werner R, Yamamoto T, Handels H, Ehrhardt J. Subpopulation-based correspondence modelling for improved respiratory motion estimation in the presence of inter-fraction motion variations. ACTA ACUST UNITED AC 2017; 62:5823-5839. [DOI: 10.1088/1361-6560/aa70cc] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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Castillo E, Castillo R, Vinogradskiy Y, Guerrero T. The numerical stability of transformation-based CT ventilation. Int J Comput Assist Radiol Surg 2017; 12:569-580. [PMID: 28058533 PMCID: PMC5362676 DOI: 10.1007/s11548-016-1509-x] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2016] [Accepted: 12/03/2016] [Indexed: 12/31/2022]
Abstract
Abstract Computed tomography (CT)-derived ventilation imaging utilizes deformable image registration (DIR) to recover respiratory-induced tissue volume changes from inhale/exhale 4DCT phases. While current strategies for validating CT ventilation rely on analyzing its correlation with existing functional imaging modalities, the numerical stability of the CT ventilation calculation has not been characterized. Purpose The purpose of this study is to examine how small changes in the DIR displacement field can affect the calculation of transformation-based CT ventilation. Methods First, we derive a mathematical theorem, which states that the change in ventilation metric induced by a perturbation to single displacement vector is bounded by the perturbation magnitude. Second, we introduce a novel Jacobian constrained optimization method for computing user-defined CT ventilation images. Results Using the Jacobian constrained method, we demonstrate that for the same inhale/exhale CT pair, it is possible to compute two DIR transformations that have similar spatial accuracies, but generate ventilation images with significantly different physical characteristics. In particular, we compute a CT ventilation image that perfectly correlates with a single-photon emission CT perfusion scan. Conclusion The analysis and experiments indicate that while transformation-based CT ventilation is a promising modality, small changes in the DIR displacement field can result in large relative changes in the ventilation image. As such, approaches for improving the reproducibility of CT ventilation are still needed.
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Affiliation(s)
- Edward Castillo
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA.
- Department of Computational and Applied Mathematics, Rice University, Houston, TX, USA.
| | - Richard Castillo
- Department of Radiation Oncology, University of Texas Medical Branch, Galveston, TX, USA
| | | | - Thomas Guerrero
- Department of Radiation Oncology, Beaumont Health Systems, Royal Oak, MI, USA
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Ireland R, Tahir B, Wild J, Lee C, Hatton M. Functional Image-guided Radiotherapy Planning for Normal Lung Avoidance. Clin Oncol (R Coll Radiol) 2016; 28:695-707. [DOI: 10.1016/j.clon.2016.08.005] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2016] [Revised: 07/19/2016] [Accepted: 07/20/2016] [Indexed: 12/25/2022]
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Kida S, Bal M, Kabus S, Negahdar M, Shan X, Loo BW, Keall PJ, Yamamoto T. CT ventilation functional image-based IMRT treatment plans are comparable to SPECT ventilation functional image-based plans. Radiother Oncol 2016; 118:521-7. [DOI: 10.1016/j.radonc.2016.02.019] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2015] [Revised: 01/07/2016] [Accepted: 02/05/2016] [Indexed: 12/25/2022]
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Yamamoto T, Kabus S, Bal M, Keall P, Benedict S, Daly M. The first patient treatment of computed tomography ventilation functional image-guided radiotherapy for lung cancer. Radiother Oncol 2016; 118:227-31. [DOI: 10.1016/j.radonc.2015.11.006] [Citation(s) in RCA: 67] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2015] [Revised: 10/27/2015] [Accepted: 11/18/2015] [Indexed: 12/25/2022]
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Dewalle-Vignion AS, Betrouni N, Baillet C, Vermandel M. Is STAPLE algorithm confident to assess segmentation methods in PET imaging? Phys Med Biol 2015; 60:9473-91. [PMID: 26584044 DOI: 10.1088/0031-9155/60/24/9473] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Accurate tumor segmentation in [18F]-fluorodeoxyglucose positron emission tomography is crucial for tumor response assessment and target volume definition in radiation therapy. Evaluation of segmentation methods from clinical data without ground truth is usually based on physicians' manual delineations. In this context, the simultaneous truth and performance level estimation (STAPLE) algorithm could be useful to manage the multi-observers variability. In this paper, we evaluated how this algorithm could accurately estimate the ground truth in PET imaging. Complete evaluation study using different criteria was performed on simulated data. The STAPLE algorithm was applied to manual and automatic segmentation results. A specific configuration of the implementation provided by the Computational Radiology Laboratory was used. Consensus obtained by the STAPLE algorithm from manual delineations appeared to be more accurate than manual delineations themselves (80% of overlap). An improvement of the accuracy was also observed when applying the STAPLE algorithm to automatic segmentations results. The STAPLE algorithm, with the configuration used in this paper, is more appropriate than manual delineations alone or automatic segmentations results alone to estimate the ground truth in PET imaging. Therefore, it might be preferred to assess the accuracy of tumor segmentation methods in PET imaging.
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Affiliation(s)
- Anne-Sophie Dewalle-Vignion
- Université Lille, Inserm, CHU Lille, U1189-ONCO-THAI-Image Assisted Laser Therapy for Oncology, F-59000 Lille, France
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Analysis of Long-Term 4-Dimensional Computed Tomography Regional Ventilation After Radiation Therapy. Int J Radiat Oncol Biol Phys 2015; 92:683-90. [DOI: 10.1016/j.ijrobp.2015.02.037] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2014] [Revised: 02/14/2015] [Accepted: 02/18/2015] [Indexed: 11/17/2022]
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Dang J, Gu X, Pan T, Wang J. A pilot evaluation of a 4-dimensional cone-beam computed tomographic scheme based on simultaneous motion estimation and image reconstruction. Int J Radiat Oncol Biol Phys 2015; 91:410-8. [PMID: 25636763 DOI: 10.1016/j.ijrobp.2014.10.029] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2014] [Revised: 10/10/2014] [Accepted: 10/14/2014] [Indexed: 11/26/2022]
Abstract
PURPOSE To evaluate the performance of a 4-dimensional (4-D) cone-beam computed tomographic (CBCT) reconstruction scheme based on simultaneous motion estimation and image reconstruction (SMEIR) through patient studies. METHODS AND MATERIALS The SMEIR algorithm contains 2 alternating steps: (1) motion-compensated CBCT reconstruction using projections from all phases to reconstruct a reference phase 4D-CBCT by explicitly considering the motion models between each different phase and (2) estimation of motion models directly from projections by matching the measured projections to the forward projection of the deformed reference phase 4D-CBCT. Four lung cancer patients were scanned for 4 to 6 minutes to obtain approximately 2000 projections for each patient. To evaluate the performance of the SMEIR algorithm on a conventional 1-minute CBCT scan, the number of projections at each phase was reduced by a factor of 5, 8, or 10 for each patient. Then, 4D-CBCTs were reconstructed from the down-sampled projections using Feldkamp-Davis-Kress, total variation (TV) minimization, prior image constrained compressive sensing (PICCS), and SMEIR. Using the 4D-CBCT reconstructed from the fully sampled projections as a reference, the relative error (RE) of reconstructed images, root mean square error (RMSE), and maximum error (MaxE) of estimated tumor positions were analyzed to quantify the performance of the SMEIR algorithm. RESULTS The SMEIR algorithm can achieve results consistent with the reference 4D-CBCT reconstructed with many more projections per phase. With an average of 30 to 40 projections per phase, the MaxE in tumor position detection is less than 1 mm in SMEIR for all 4 patients. CONCLUSION The results from a limited number of patients show that SMEIR is a promising tool for high-quality 4D-CBCT reconstruction and tumor motion modeling.
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Affiliation(s)
- Jun Dang
- Department of Radiation Oncology, The University of Texas Southwestern Medical Center, Dallas, Texas
| | - Xuejun Gu
- Department of Radiation Oncology, The University of Texas Southwestern Medical Center, Dallas, Texas
| | - Tinsu Pan
- Department of Imaging Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas
| | - Jing Wang
- Department of Radiation Oncology, The University of Texas Southwestern Medical Center, Dallas, Texas.
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Brennan D, Schubert L, Diot Q, Castillo R, Castillo E, Guerrero T, Martel MK, Linderman D, Gaspar LE, Miften M, Kavanagh BD, Vinogradskiy Y. Clinical validation of 4-dimensional computed tomography ventilation with pulmonary function test data. Int J Radiat Oncol Biol Phys 2015; 92:423-9. [PMID: 25817531 DOI: 10.1016/j.ijrobp.2015.01.019] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2014] [Revised: 01/09/2015] [Accepted: 01/13/2015] [Indexed: 12/25/2022]
Abstract
PURPOSE A new form of functional imaging has been proposed in the form of 4-dimensional computed tomography (4DCT) ventilation. Because 4DCTs are acquired as part of routine care for lung cancer patients, calculating ventilation maps from 4DCTs provides spatial lung function information without added dosimetric or monetary cost to the patient. Before 4DCT-ventilation is implemented it needs to be clinically validated. Pulmonary function tests (PFTs) provide a clinically established way of evaluating lung function. The purpose of our work was to perform a clinical validation by comparing 4DCT-ventilation metrics with PFT data. METHODS AND MATERIALS Ninety-eight lung cancer patients with pretreatment 4DCT and PFT data were included in the study. Pulmonary function test metrics used to diagnose obstructive lung disease were recorded: forced expiratory volume in 1 second (FEV1) and FEV1/forced vital capacity. Four-dimensional CT data sets and spatial registration were used to compute 4DCT-ventilation images using a density change-based and a Jacobian-based model. The ventilation maps were reduced to single metrics intended to reflect the degree of ventilation obstruction. Specifically, we computed the coefficient of variation (SD/mean), ventilation V20 (volume of lung ≤20% ventilation), and correlated the ventilation metrics with PFT data. Regression analysis was used to determine whether 4DCT ventilation data could predict for normal versus abnormal lung function using PFT thresholds. RESULTS Correlation coefficients comparing 4DCT-ventilation with PFT data ranged from 0.63 to 0.72, with the best agreement between FEV1 and coefficient of variation. Four-dimensional CT ventilation metrics were able to significantly delineate between clinically normal versus abnormal PFT results. CONCLUSIONS Validation of 4DCT ventilation with clinically relevant metrics is essential. We demonstrate good global agreement between PFTs and 4DCT-ventilation, indicating that 4DCT-ventilation provides a reliable assessment of lung function. Four-dimensional CT ventilation enables exciting opportunities to assess lung function and create functional avoidance radiation therapy plans. The present work provides supporting evidence for the integration of 4DCT-ventilation into clinical trials.
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Affiliation(s)
| | - Leah Schubert
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado
| | - Quentin Diot
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado
| | - Richard Castillo
- Department of Radiation Oncology, The University of Texas Medical Branch, Galveston, Texas
| | - Edward Castillo
- Department of Radiation Oncology, William Beaumont Hospital, Royal Oak, Michigan
| | - Thomas Guerrero
- Department of Radiation Oncology, William Beaumont Hospital, Royal Oak, Michigan
| | - Mary K Martel
- Department of Radiation Physics, The University of Texas M. D. Anderson Cancer Center, Houston, Texas
| | - Derek Linderman
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado
| | - Laurie E Gaspar
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado
| | - Moyed Miften
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado
| | - Brian D Kavanagh
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado
| | - Yevgeniy Vinogradskiy
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado.
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Kida S. [Toward physiologically-adaptive radiotherapy with lung functional imaging based on 4D CT]. Nihon Hoshasen Gijutsu Gakkai Zasshi 2014; 70:1353-1359. [PMID: 25410344 DOI: 10.6009/jjrt.2014_jsrt_70.11.1353] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
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Pennati F, Salito C, Baroni G, Woods J, Aliverti A. Comparison between multivolume CT-based surrogates of regional ventilation in healthy subjects. Acad Radiol 2014; 21:1268-75. [PMID: 25126974 DOI: 10.1016/j.acra.2014.05.022] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2013] [Revised: 05/22/2014] [Accepted: 05/27/2014] [Indexed: 01/14/2023]
Abstract
RATIONALE AND OBJECTIVES The assessment of regional ventilation is of critical importance when investigating lung function during disease progression and planning of pulmonary interventions. Recently, different computed tomography (CT)-based parameters have been proposed as surrogates of lung ventilation. The aim of the present study was to compare these parameters, namely variations of density (ΔHU), specific volume (sVol), and specific gas volume (ΔSVg) between different lung volumes, in relation to their topographic distribution within the lung. MATERIALS AND METHODS Ten healthy volunteers were scanned via high-resolution CT at residual volume (RV) and total lung capacity (TLC); ΔHU, sVol, and ΔSVg were mapped voxel by voxel after registering TLC onto RV. Variations of the three parameters along the vertical and horizontal directions were analyzed. RESULTS Along the vertical direction (from ventral to dorsal regions), a strong dependence on gravity was found in ΔHU and sVol, with greater values in the dorsal regions of the lung (P < .001), whereas ΔSVg was more homogeneously distributed within the lung. Conversely, along the caudocranial direction (from lung bases to apexes) where no gravitational gradient is present, the three parameters behaved similarly, with lower values at the apices. CONCLUSIONS ΔHU, sVol, and ΔSVg behave differently along the gravity direction. As the greater amount of air delivered to the dependent portion of the lung supplies a larger number of alveoli, the amount of gas delivered to alveoli compared to the mass of tissue is not gravity dependent. The minimization of gravity dependence in the distribution of ventilation when using ΔSVg suggests that this parameter is more reliable to discriminate healthy from pathologic regions.
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Affiliation(s)
- Francesca Pennati
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, P.zza L. da Vinci, 32, 20133 Milano, Italy
| | - Caterina Salito
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, P.zza L. da Vinci, 32, 20133 Milano, Italy
| | - Guido Baroni
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, P.zza L. da Vinci, 32, 20133 Milano, Italy
| | - Jason Woods
- Pulmonary Imaging Research Center, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio
| | - Andrea Aliverti
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, P.zza L. da Vinci, 32, 20133 Milano, Italy.
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Du K, Reinhardt JM, Christensen GE, Ding K, Bayouth JE. Respiratory effort correction strategies to improve the reproducibility of lung expansion measurements. Med Phys 2014; 40:123504. [PMID: 24320544 DOI: 10.1118/1.4829519] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE Four-dimensional computed tomography (4DCT) can be used to make measurements of pulmonary function longitudinally. The sensitivity of such measurements to identify change depends on measurement uncertainty. Previously, intrasubject reproducibility of Jacobian-based measures of lung tissue expansion was studied in two repeat prior-RT 4DCT human acquisitions. Difference in respiratory effort such as breathing amplitude and frequency may affect longitudinal function assessment. In this study, the authors present normalization schemes that correct ventilation images for variations in respiratory effort and assess the reproducibility improvement after effort correction. METHODS Repeat 4DCT image data acquired within a short time interval from 24 patients prior to radiation therapy (RT) were used for this analysis. Using a tissue volume preserving deformable image registration algorithm, Jacobian ventilation maps in two scanning sessions were computed and compared on the same coordinate for reproducibility analysis. In addition to computing the ventilation maps from end expiration to end inspiration, the authors investigated the effort normalization strategies using other intermediated inspiration phases upon the principles of equivalent tidal volume (ETV) and equivalent lung volume (ELV). Scatter plots and mean square error of the repeat ventilation maps and the Jacobian ratio map were generated for four conditions: no effort correction, global normalization, ETV, and ELV. In addition, gamma pass rate was calculated from a modified gamma index evaluation between two ventilation maps, using acceptance criterions of 2 mm distance-to-agreement and 5% ventilation difference. RESULTS The pattern of regional pulmonary ventilation changes as lung volume changes. All effort correction strategies improved reproducibility when changes in respiratory effort were greater than 150 cc (p < 0.005 with regard to the gamma pass rate). Improvement of reproducibility was correlated with respiratory effort difference (R = 0.744 for ELV in the cohort with tidal volume difference greater than 100 cc). In general for all subjects, global normalization, ETV and ELV significantly improved reproducibility compared to no effort correction (p = 0.009, 0.002, 0.005 respectively). When tidal volume difference was small (less than 100 cc), none of the three effort correction strategies improved reproducibility significantly (p = 0.52, 0.46, 0.46 respectively). For the cohort (N = 13) with tidal volume difference greater than 100 cc, the average gamma pass rate improves from 57.3% before correction to 66.3% after global normalization, and 76.3% after ELV. ELV was found to be significantly better than global normalization (p = 0.04 for all subjects, and p = 0.003 for the cohort with tidal volume difference greater than 100 cc). CONCLUSIONS All effort correction strategies improve the reproducibility of the authors' pulmonary ventilation measures, and the improvement of reproducibility is highly correlated with the changes in respiratory effort. ELV gives better results as effort difference increase, followed by ETV, then global. However, based on the spatial and temporal heterogeneity in the lung expansion rate, a single scaling factor (e.g., global normalization) appears to be less accurate to correct the ventilation map when changes in respiratory effort are large.
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Affiliation(s)
- Kaifang Du
- Department of Biomedical Engineering, The University of Iowa, Iowa City, Iowa 52242
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Yamamoto T, Kabus S, Lorenz C, Mittra E, Hong JC, Chung M, Eclov N, To J, Diehn M, Loo BW, Keall PJ. Pulmonary ventilation imaging based on 4-dimensional computed tomography: comparison with pulmonary function tests and SPECT ventilation images. Int J Radiat Oncol Biol Phys 2014; 90:414-22. [PMID: 25104070 DOI: 10.1016/j.ijrobp.2014.06.006] [Citation(s) in RCA: 77] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2014] [Revised: 05/28/2014] [Accepted: 06/01/2014] [Indexed: 12/25/2022]
Abstract
PURPOSE 4-dimensional computed tomography (4D-CT)-based pulmonary ventilation imaging is an emerging functional imaging modality. The purpose of this study was to investigate the physiological significance of 4D-CT ventilation imaging by comparison with pulmonary function test (PFT) measurements and single-photon emission CT (SPECT) ventilation images, which are the clinical references for global and regional lung function, respectively. METHODS AND MATERIALS In an institutional review board-approved prospective clinical trial, 4D-CT imaging and PFT and/or SPECT ventilation imaging were performed in thoracic cancer patients. Regional ventilation (V4DCT) was calculated by deformable image registration of 4D-CT images and quantitative analysis for regional volume change. V4DCT defect parameters were compared with the PFT measurements (forced expiratory volume in 1 second (FEV1; % predicted) and FEV1/forced vital capacity (FVC; %). V4DCT was also compared with SPECT ventilation (VSPECT) to (1) test whether V4DCT in VSPECT defect regions is significantly lower than in nondefect regions by using the 2-tailed t test; (2) to quantify the spatial overlap between V4DCT and VSPECT defect regions with Dice similarity coefficient (DSC); and (3) to test ventral-to-dorsal gradients by using the 2-tailed t test. RESULTS Of 21 patients enrolled in the study, 18 patients for whom 4D-CT and either PFT or SPECT were acquired were included in the analysis. V4DCT defect parameters were found to have significant, moderate correlations with PFT measurements. For example, V4DCT(HU) defect volume increased significantly with decreasing FEV1/FVC (R=-0.65, P<.01). V4DCT in VSPECT defect regions was significantly lower than in nondefect regions (mean V4DCT(HU) 0.049 vs 0.076, P<.01). The average DSCs for the spatial overlap with SPECT ventilation defect regions were only moderate (V4DCT(HU)0.39 ± 0.11). Furthermore, ventral-to-dorsal gradients of V4DCT were strong (V4DCT(HU) R(2) = 0.69, P=.08), which was similar to VSPECT (R(2) = 0.96, P<.01). CONCLUSIONS An 18-patient study demonstrated significant correlations between 4D-CT ventilation and PFT measurements as well as SPECT ventilation, providing evidence toward the validation of 4D-CT ventilation imaging.
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Affiliation(s)
- Tokihiro Yamamoto
- Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California; Department of Radiation Oncology, University of California Davis School of Medicine, Sacramento, California.
| | - Sven Kabus
- Department of Digital Imaging, Philips Research Europe, Hamburg, Germany
| | - Cristian Lorenz
- Department of Digital Imaging, Philips Research Europe, Hamburg, Germany
| | - Erik Mittra
- Departments of Radiology, Stanford University School of Medicine, Stanford, California
| | - Julian C Hong
- Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California
| | - Melody Chung
- Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California
| | - Neville Eclov
- Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California
| | - Jacqueline To
- Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California
| | - Maximilian Diehn
- Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California
| | - Billy W Loo
- Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California
| | - Paul J Keall
- Radiation Physics Laboratory, Sydney Medical School, University of Sydney, Sydney, New South Wales, Australia
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Vinogradskiy Y, Koo PJ, Castillo R, Castillo E, Guerrero T, Gaspar LE, Miften M, Kavanagh BD. Comparison of 4-dimensional computed tomography ventilation with nuclear medicine ventilation-perfusion imaging: a clinical validation study. Int J Radiat Oncol Biol Phys 2014; 89:199-205. [PMID: 24725702 DOI: 10.1016/j.ijrobp.2014.01.009] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2013] [Revised: 12/11/2013] [Accepted: 01/08/2014] [Indexed: 11/18/2022]
Abstract
PURPOSE Four-dimensional computed tomography (4DCT) ventilation imaging provides lung function information for lung cancer patients undergoing radiation therapy. Before 4DCT-ventilation can be implemented clinically it needs to be validated against an established imaging modality. The purpose of this work was to compare 4DCT-ventilation to nuclear medicine ventilation, using clinically relevant global metrics and radiologist observations. METHODS AND MATERIALS Fifteen lung cancer patients with 16 sets of 4DCT and nuclear medicine ventilation-perfusion (VQ) images were used for the study. The VQ-ventilation images were acquired in planar mode using Tc-99m-labeled diethylenetriamine-pentaacetic acid aerosol inhalation. 4DCT data, spatial registration, and a density-change-based model were used to compute a 4DCT-based ventilation map for each patient. The percent ventilation was calculated in each lung and each lung third for both the 4DCT and VQ-ventilation scans. A nuclear medicine radiologist assessed the VQ and 4DCT scans for the presence of ventilation defects. The VQ and 4DCT-based images were compared using regional percent ventilation and radiologist clinical observations. RESULTS Individual patient examples demonstrate good qualitative agreement between the 4DCT and VQ-ventilation scans. The correlation coefficients were 0.68 and 0.45, using the percent ventilation in each individual lung and lung third, respectively. Using radiologist-noted presence of ventilation defects and receiver operating characteristic analysis, the sensitivity, specificity, and accuracy of the 4DCT-ventilation were 90%, 64%, and 81%, respectively. CONCLUSIONS The current work compared 4DCT with VQ-based ventilation using clinically relevant global metrics and radiologist observations. We found good agreement between the radiologist's assessment of the 4DCT and VQ-ventilation images as well as the percent ventilation in each lung. The agreement lessened when the data were analyzed on a regional level. Our study presents an important step for the integration of 4DCT-ventilation into thoracic clinical practice.
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Affiliation(s)
- Yevgeniy Vinogradskiy
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado.
| | - Phillip J Koo
- Department of Radiology, University of Colorado School of Medicine, Aurora, Colorado
| | - Richard Castillo
- Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas
| | - Edward Castillo
- Department of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas; Department of Computational and Applied Mathematics, Rice University, Houston, Texas
| | - Thomas Guerrero
- Department of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas; Department of Computational and Applied Mathematics, Rice University, Houston, Texas
| | - Laurie E Gaspar
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado
| | - Moyed Miften
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado
| | - Brian D Kavanagh
- Department of Radiation Oncology, University of Colorado School of Medicine, Aurora, Colorado
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Wang J, Gu X. Simultaneous motion estimation and image reconstruction (SMEIR) for 4D cone-beam CT. Med Phys 2014; 40:101912. [PMID: 24089914 DOI: 10.1118/1.4821099] [Citation(s) in RCA: 67] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE Image reconstruction and motion model estimation in four-dimensional cone-beam CT (4D-CBCT) are conventionally handled as two sequential steps. Due to the limited number of projections at each phase, the image quality of 4D-CBCT is degraded by view aliasing artifacts, and the accuracy of subsequent motion modeling is decreased by the inferior 4D-CBCT. The objective of this work is to enhance both the image quality of 4D-CBCT and the accuracy of motion model estimation with a novel strategy enabling simultaneous motion estimation and image reconstruction (SMEIR). METHODS The proposed SMEIR algorithm consists of two alternating steps: (1) model-based iterative image reconstruction to obtain a motion-compensated primary CBCT (m-pCBCT) and (2) motion model estimation to obtain an optimal set of deformation vector fields (DVFs) between the m-pCBCT and other 4D-CBCT phases. The motion-compensated image reconstruction is based on the simultaneous algebraic reconstruction technique (SART) coupled with total variation minimization. During the forward- and backprojection of SART, measured projections from an entire set of 4D-CBCT are used for reconstruction of the m-pCBCT by utilizing the updated DVF. The DVF is estimated by matching the forward projection of the deformed m-pCBCT and measured projections of other phases of 4D-CBCT. The performance of the SMEIR algorithm is quantitatively evaluated on a 4D NCAT phantom. The quality of reconstructed 4D images and the accuracy of tumor motion trajectory are assessed by comparing with those resulting from conventional sequential 4D-CBCT reconstructions (FDK and total variation minimization) and motion estimation (demons algorithm). The performance of the SMEIR algorithm is further evaluated by reconstructing a lung cancer patient 4D-CBCT. RESULTS Image quality of 4D-CBCT is greatly improved by the SMEIR algorithm in both phantom and patient studies. When all projections are used to reconstruct a 3D-CBCT by FDK, motion-blurring artifacts are present, leading to a 24.4% relative reconstruction error in the NACT phantom. View aliasing artifacts are present in 4D-CBCT reconstructed by FDK from 20 projections, with a relative error of 32.1%. When total variation minimization is used to reconstruct 4D-CBCT, the relative error is 18.9%. Image quality of 4D-CBCT is substantially improved by using the SMEIR algorithm and relative error is reduced to 7.6%. The maximum error (MaxE) of tumor motion determined from the DVF obtained by demons registration on a FDK-reconstructed 4D-CBCT is 3.0, 2.3, and 7.1 mm along left-right (L-R), anterior-posterior (A-P), and superior-inferior (S-I) directions, respectively. From the DVF obtained by demons registration on 4D-CBCT reconstructed by total variation minimization, the MaxE of tumor motion is reduced to 1.5, 0.5, and 5.5 mm along L-R, A-P, and S-I directions. From the DVF estimated by SMEIR algorithm, the MaxE of tumor motion is further reduced to 0.8, 0.4, and 1.5 mm along L-R, A-P, and S-I directions, respectively. CONCLUSIONS The proposed SMEIR algorithm is able to estimate a motion model and reconstruct motion-compensated 4D-CBCT. The SMEIR algorithm improves image reconstruction accuracy of 4D-CBCT and tumor motion trajectory estimation accuracy as compared to conventional sequential 4D-CBCT reconstruction and motion estimation.
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Affiliation(s)
- Jing Wang
- Department of Radiation Oncology, The University of Texas Southwestern Medical Center, Dallas, Texas 75235-8808
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Yip S, Perk T, Jeraj R. Development and evaluation of an articulated registration algorithm for human skeleton registration. Phys Med Biol 2014; 59:1485-99. [PMID: 24594843 DOI: 10.1088/0031-9155/59/6/1485] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Accurate registration over multiple scans is necessary to assess treatment response of bone diseases (e.g. metastatic bone lesions). This study aimed to develop and evaluate an articulated registration algorithm for the whole-body skeleton registration in human patients. In articulated registration, whole-body skeletons are registered by auto-segmenting into individual bones using atlas-based segmentation, and then rigidly aligning them. Sixteen patients (weight = 80-117 kg, height = 168-191 cm) with advanced prostate cancer underwent the pre- and mid-treatment PET/CT scans over a course of cancer therapy. Skeletons were extracted from the CT images by thresholding (HU>150). Skeletons were registered using the articulated, rigid, and deformable registration algorithms to account for position and postural variability between scans. The inter-observers agreement in the atlas creation, the agreement between the manually and atlas-based segmented bones, and the registration performances of all three registration algorithms were all assessed using the Dice similarity index-DSIobserved, DSIatlas, and DSIregister. Hausdorff distance (dHausdorff) of the registered skeletons was also used for registration evaluation. Nearly negligible inter-observers variability was found in the bone atlases creation as the DSIobserver was 96 ± 2%. Atlas-based and manual segmented bones were in excellent agreement with DSIatlas of 90 ± 3%. Articulated (DSIregsiter = 75 ± 2%, dHausdorff = 0.37 ± 0.08 cm) and deformable registration algorithms (DSIregister = 77 ± 3%, dHausdorff = 0.34 ± 0.08 cm) considerably outperformed the rigid registration algorithm (DSIregsiter = 59 ± 9%, dHausdorff = 0.69 ± 0.20 cm) in the skeleton registration as the rigid registration algorithm failed to capture the skeleton flexibility in the joints. Despite superior skeleton registration performance, deformable registration algorithm failed to preserve the local rigidity of bones as over 60% of the skeletons were deformed. Articulated registration is superior to rigid and deformable registrations by capturing global flexibility while preserving local rigidity inherent in skeleton registration. Therefore, articulated registration can be employed to accurately register the whole-body human skeletons, and it enables the treatment response assessment of various bone diseases.
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Affiliation(s)
- Stephen Yip
- Department of Physics, University of Wisconsin, Madison, WI, USA
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Du K, Bayouth JE, Ding K, Christensen GE, Cao K, Reinhardt JM. Reproducibility of intensity-based estimates of lung ventilation. Med Phys 2014; 40:063504. [PMID: 23718615 DOI: 10.1118/1.4805106] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE Lung function depends on lung expansion and contraction during the respiratory cycle. Respiratory-gated CT imaging and image registration can be used to estimate the regional lung volume change by observing CT voxel density changes during inspiration or expiration. In this study, the authors examine the reproducibility of intensity-based estimates of lung tissue expansion and contraction in three mechanically ventilated sheep and ten spontaneously breathing humans. The intensity-based estimates are compared to the estimates of lung function derived from image registration deformation field. METHODS 4DCT data set was acquired for a cohort of spontaneously breathing humans and anesthetized and mechanically ventilated sheep. For each subject, two 4DCT scans were performed with a short time interval between acquisitions. From each 4DCT data set, an image pair consisting of a volume reconstructed near end inspiration and a volume reconstructed near end exhalation was selected. The end inspiration and end exhalation images were registered using a tissue volume preserving deformable registration algorithm. The CT density change in the registered image pair was used to compute intensity-based specific air volume change (SAC) and the intensity-based Jacobian (IJAC), while the transformation-based Jacobian (TJAC) was computed directly from the image registration deformation field. IJAC is introduced to make the intensity-based and transformation-based methods comparable since SAC and Jacobian may not be associated with the same physiological phenomenon and have different units. Scan-to-scan variations in respiratory effort were corrected using a global scaling factor for normalization. A gamma index metric was introduced to quantify voxel-by-voxel reproducibility considering both differences in ventilation and distance between matching voxels. The authors also tested how different CT prefiltering levels affected intensity-based ventilation reproducibility. RESULTS Higher reproducibility was found for anesthetized mechanically ventilated animals than for the humans for both the intensity-based (IJAC) and transformation-based (TJAC) ventilation estimates. The human IJAC maps had scan-to-scan correlation coefficients of 0.45 ± 0.14, a gamma pass rate 70 ± 8 without normalization and 75 ± 5 with normalization. The human TJAC maps had correlation coefficients 0.81 ± 0.10, a gamma pass rate 86 ± 11 without normalization and 93 ± 4 with normalization. The gamma pass rate and correlation coefficient of the IJAC maps gradually increased with increased smoothing, but were still much lower than those of the TJAC maps. CONCLUSIONS The transformation-based ventilation maps show better reproducibility than the intensity-based maps, especially in human subjects. Reproducibility was also found to depend on variations in respiratory effort; all techniques were better when applied to images from mechanically ventilated sheep compared to spontaneously breathing human subjects. Nevertheless, intensity-based techniques applied to mechanically ventilated sheep were less reproducible than the transformation-based applied to spontaneously breathing humans, suggesting the method used to determine ventilation maps is important. Prefiltering of the CT images may help to improve the reproducibility of the intensity-based ventilation estimates, but even with filtering the reproducibility of the intensity-based ventilation estimates is not as good as that of transformation-based ventilation estimates.
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Affiliation(s)
- Kaifang Du
- Department of Biomedical Engineering, The University of Iowa, Iowa City, Iowa 52242, USA
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Kipritidis J, Siva S, Hofman MS, Callahan J, Hicks RJ, Keall PJ. Validating and improving CT ventilation imaging by correlating with ventilation 4D-PET/CT using 68
Ga-labeled nanoparticles. Med Phys 2013; 41:011910. [DOI: 10.1118/1.4856055] [Citation(s) in RCA: 66] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
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49
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Yamamoto T, Kabus S, Lorenz C, Johnston E, Maxim PG, Diehn M, Eclov N, Barquero C, Loo BW, Keall PJ. 4D CT lung ventilation images are affected by the 4D CT sorting method. Med Phys 2013; 40:101907. [PMID: 24089909 PMCID: PMC3785523 DOI: 10.1118/1.4820538] [Citation(s) in RCA: 50] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2013] [Revised: 07/01/2013] [Accepted: 08/17/2013] [Indexed: 11/07/2022] Open
Abstract
PURPOSE Four-dimensional (4D) computed tomography (CT) ventilation imaging is a novel promising technique for lung functional imaging. The current standard 4D CT technique using phase-based sorting frequently results in artifacts, which may deteriorate the accuracy of ventilation imaging. The purpose of this study was to quantify the variability of 4D CT ventilation imaging due to 4D CT sorting. METHODS 4D CT image sets from nine lung cancer patients were each sorted by the phase-based method and anatomic similarity-based method, designed to reduce artifacts, with corresponding ventilation images created for each method. Artifacts in the resulting 4D CT images were quantified with the artifact score which was defined based on the difference between the normalized cross correlation for CT slices within a CT data segment and that for CT slices bordering the interface between adjacent CT data segments. The ventilation variation was quantified using voxel-based Spearman rank correlation coefficients for all lung voxels, and Dice similarity coefficients (DSC) for the spatial overlap of low-functional lung volumes. Furthermore, the correlations with matching single-photon emission CT (SPECT) ventilation images (assumed ground truth) were evaluated for three patients to investigate which sorting method provides higher physiologic accuracy. RESULTS Anatomic similarity-based sorting reduced 4D CT artifacts compared to phase-based sorting (artifact score, 0.45 ± 0.14 vs 0.58 ± 0.24, p = 0.10 at peak-exhale; 0.63 ± 0.19 vs 0.71 ± 0.31, p = 0.25 at peak-inhale). The voxel-based correlation between the two ventilation images was 0.69 ± 0.26 on average, ranging from 0.03 to 0.85. The DSC was 0.71 ± 0.13 on average. Anatomic similarity-based sorting yielded significantly fewer lung voxels with paradoxical negative ventilation values than phase-based sorting (5.0 ± 2.6% vs 9.7 ± 8.4%, p = 0.05), and improved the correlation with SPECT ventilation regionally. CONCLUSIONS The variability of 4D CT ventilation imaging due to 4D CT sorting was moderate overall and substantial in some cases, suggesting that 4D CT artifacts are an important source of variations in 4D CT ventilation imaging. Reduction of 4D CT artifacts provided more physiologically convincing and accurate ventilation estimates. Further studies are needed to confirm this result.
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Affiliation(s)
- Tokihiro Yamamoto
- Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California 94305-5847 and Department of Radiation Oncology, University of California Davis School of Medicine, Sacramento, California 95817
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