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Ragaller F, Sjule E, Urem YB, Schlegel J, El R, Urbancic D, Urbancic I, Blom H, Sezgin E. Quantifying Fluorescence Lifetime Responsiveness of Environment-Sensitive Probes for Membrane Fluidity Measurements. J Phys Chem B 2024; 128:2154-2167. [PMID: 38415644 PMCID: PMC10926104 DOI: 10.1021/acs.jpcb.3c07006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 02/08/2024] [Accepted: 02/09/2024] [Indexed: 02/29/2024]
Abstract
The structural diversity of different lipid species within the membrane defines its biophysical properties such as membrane fluidity, phase transition, curvature, charge distribution, and tension. Environment-sensitive probes, which change their spectral properties in response to their surrounding milieu, have greatly contributed to our understanding of such biophysical properties. To realize the full potential of these probes and avoid misinterpretation of their spectral responses, a detailed investigation of their fluorescence characteristics in different environments is necessary. Here, we examined the fluorescence lifetime of two newly developed membrane order probes, NR12S and NR12A, in response to alterations in their environments such as the degree of lipid saturation, cholesterol content, double bond position and configuration, and phospholipid headgroup. As a comparison, we investigated the lifetime sensitivity of the membrane tension probe Flipper in these environments. Applying fluorescence lifetime imaging microscopy (FLIM) in both model membranes and biological membranes, all probes distinguished membrane phases by lifetime but exhibited different lifetime sensitivities to varying membrane biophysical properties (e.g., cholesterol). While the lifetime of Flipper is particularly sensitive to the membrane cholesterol content, the NR12S and NR12A lifetimes are moderately sensitive to both the cholesterol content and lipid acyl chains. Moreover, all of the probes exhibit longer lifetimes at longer emission wavelengths in membranes of any complexity. This emission wavelength dependency results in varying lifetime resolutions at different spectral regions, which are highly relevant for FLIM data acquisition. Our data provide valuable insights on how to perform FLIM with these probes and highlight both their potential and limitations.
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Affiliation(s)
- Franziska Ragaller
- Department
of Women’s and Children’s Health, Science for Life Laboratory, Karolinska Institutet, 17165 Solna, Sweden
| | - Ellen Sjule
- Department
of Women’s and Children’s Health, Science for Life Laboratory, Karolinska Institutet, 17165 Solna, Sweden
| | - Yagmur Balim Urem
- Department
of Women’s and Children’s Health, Science for Life Laboratory, Karolinska Institutet, 17165 Solna, Sweden
| | - Jan Schlegel
- Department
of Women’s and Children’s Health, Science for Life Laboratory, Karolinska Institutet, 17165 Solna, Sweden
| | - Rojbin El
- Weatherall
Institute of Molecular Medicine, University
of Oxford, OX39DS Oxford, United
Kingdom
| | - Dunja Urbancic
- Weatherall
Institute of Molecular Medicine, University
of Oxford, OX39DS Oxford, United
Kingdom
- Faculty
of Pharmacy, University
of Ljubljana, 1000 Ljubljana, Slovenia
| | - Iztok Urbancic
- Laboratory
of Biophysics, Condensed Matter Physics Department, Jožef Stefan Institute, 1000 Ljubljana, Slovenia
| | - Hans Blom
- Science
for Life Laboratory, Department of Applied Physics, Royal Institute of Technology, 17165 Solna, Sweden
| | - Erdinc Sezgin
- Department
of Women’s and Children’s Health, Science for Life Laboratory, Karolinska Institutet, 17165 Solna, Sweden
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Shih HW, Alas GCM, Paredez AR. Encystation stimuli sensing is mediated by adenylate cyclase AC2-dependent cAMP signaling in Giardia. Nat Commun 2023; 14:7245. [PMID: 37945557 PMCID: PMC10636121 DOI: 10.1038/s41467-023-43028-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2023] [Accepted: 10/26/2023] [Indexed: 11/12/2023] Open
Abstract
Protozoan parasites use cAMP signaling to precisely regulate the place and time of developmental differentiation, yet it is unclear how this signaling is initiated. Encystation of the intestinal parasite Giardia lamblia can be activated by multiple stimuli, which we hypothesize result in a common physiological change. We demonstrate that bile alters plasma membrane fluidity by reducing cholesterol-rich lipid microdomains, while alkaline pH enhances bile function. Through depletion of the cAMP producing enzyme Adenylate Cyclase 2 (AC2) and the use of a newly developed Giardia-specific cAMP sensor, we show that AC2 is necessary for encystation stimuli-induced cAMP upregulation and activation of downstream signaling. Conversely, over expression of AC2 or exogenous cAMP were sufficient to initiate encystation. Our findings indicate that encystation stimuli induce membrane reorganization, trigger AC2-dependent cAMP upregulation, and initiate encystation-specific gene expression, thereby advancing our understanding of a critical stage in the life cycle of a globally important parasite.
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Affiliation(s)
- Han-Wei Shih
- Department of Biology, University of Washington, Seattle, WA, 98195, USA
| | - Germain C M Alas
- Department of Biology, University of Washington, Seattle, WA, 98195, USA
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Shih HW, Alas GCM, Paredez AR. Encystation stimuli sensing mediated by adenylate cyclase AC2-dependent cAMP signaling in Giardia. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.04.10.536239. [PMID: 37090513 PMCID: PMC10120678 DOI: 10.1101/2023.04.10.536239] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/25/2023]
Abstract
Protozoan parasites use cAMP signaling to precisely regulate the place and time of developmental differentiation, yet it is unclear how this signaling is initiated. Encystation of the intestinal parasite Giardia lamblia can be activated by multiple stimuli, which we hypothesize result in a common physiological change. We demonstrate that bile alters plasma membrane fluidity by reducing cholesterol-rich lipid microdomains, while alkaline pH enhances bile function. Through depletion of the cAMP producing enzyme Adenylate Cyclase 2 (AC2) and the use of a newly developed Giardia-specific cAMP sensor, we show that AC2 is necessary for encystation stimuli-induced cAMP upregulation and activation of downstream signaling. Conversely, over expression of AC2 or exogenous cAMP were sufficient to initiate encystation. Our findings indicate that encystation stimuli induce membrane reorganization, trigger AC2-dependent cAMP upregulation, and initiate encystation-specific gene expression, thereby advancing our understanding of a critical stage in the life cycle of a globally important parasite.
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Affiliation(s)
- Han-Wei Shih
- Department of Biology, University of Washington, Seattle, Washington 98195
| | - Germain C M Alas
- Department of Biology, University of Washington, Seattle, Washington 98195
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4
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Niko Y, Klymchenko AS. Emerging Solvatochromic Push-Pull Dyes for Monitoring the Lipid Order of Biomembranes in Live Cells. J Biochem 2021; 170:163-174. [PMID: 34213537 DOI: 10.1093/jb/mvab078] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Accepted: 06/21/2021] [Indexed: 11/13/2022] Open
Abstract
Solvatochromic dyes have emerged as a new class of fluorescent probes in the field of lipid membranes due to their ability to identify the lipid organization of biomembranes in live cells by changing the color of their fluorescence. This type of solvatochromic function is useful for studying the heterogeneous features of biomembranes caused by the uneven distribution of lipids and cholesterols in live cells and related cellular processes. Therefore, a variety of advanced solvatochromic dyes have been rapidly developed over the last decade. To provide an overview of the works recently developed solvatochromic dyes have enabled, we herein present some solvatochromic dyes, with a particular focus on those based on pyrene and Nile red. As these dyes exhibit preferable photophysical properties in terms of fluorescence microscopy applications and unique distribution/localization in cellular compartments, some have already found applications in cell biological and biophysical studies. The goal of this review is to provide information to researchers who have never used solvatochromic dyes or who have not discovered applications of such dyes in biological studies.
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Affiliation(s)
- Yosuke Niko
- Research and Education Faculty, Multidisciplinary Science Cluster, Interdisciplinary Science Unit, Kochi University, 2-5-1, Akebono-cho, Kochi-shi, Kochi, 780-8520, Japan
| | - Andrey S Klymchenko
- Laboratoire de Bioimagerie et Pathologies, UMR 7021 CNRS, Université de Strasbourg, 74 route du Rhin, 67401, Illkirch, France
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Sahu SS, Sarkar P, Shrivastava S, Chattopadhyay A. Differential effects of simvastatin on membrane organization and dynamics in varying phases. Chem Phys Lipids 2019; 225:104831. [DOI: 10.1016/j.chemphyslip.2019.104831] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2019] [Revised: 09/15/2019] [Accepted: 09/20/2019] [Indexed: 12/24/2022]
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A homologous series of apoptosis-inducing N‑acylserinols: Thermotropic phase behavior, interaction with cholesterol and characterization of cationic N‑myristoylserinol-cholesterol-CTAB niosomes. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2019; 1861:504-513. [DOI: 10.1016/j.bbamem.2018.12.002] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2018] [Revised: 12/01/2018] [Accepted: 12/05/2018] [Indexed: 12/17/2022]
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Liu S, Chen D, Yuan Y, Zhang X, Li Y, Yan S, Zhang J. Efficient intracellular delivery makes cancer cells sensitive to nanoemulsive chemodrugs. Oncotarget 2017; 8:65042-65055. [PMID: 29029410 PMCID: PMC5630310 DOI: 10.18632/oncotarget.17536] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2017] [Accepted: 04/15/2017] [Indexed: 11/25/2022] Open
Abstract
Evodiamine has been documented to possess activities in numerous cancer cells. Our preliminary study showed that A549 cells were insensitive to evodiamine. In this paper, A549 cells are sensitive to nanoemulsive evodiamine (EVONE) through an efficient intracellular and systematic delivery. EVONE entered tumor cells by energy-dependent and mainly through clathrin-mediated endocytosis. EVONE exerted a higher cytotoxicity in a dose- and time-dependent manner. The enhanced induction of cell cycle arrest was ascribed to the down-regulation of cyclin B and cyclin dependent kinase 1, while the enhanced induction of apoptosis was due to the activation of caspase −3, −8 and −9 and the decreased B-cell lymphoma 2/ assaciated X protein ratio. Furthermore, the in vivo kinetic, bioavailability and in situ absorption characteristics of EVONE were much better than those of free evodiamine. The cancer cells insensitive to free chemodrugs became sensitive to nanoemulsive chemodrugs.
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Affiliation(s)
- Shan Liu
- Chongqing Research Center for Pharmaceutical Engineering, Chongqing Medical University, Chongqing 400016, China
| | - Dilong Chen
- Tumor Drug Engineering Research Center, Chongqing Three Gorges Medical College, Chongqing 404120, China
| | - Yuming Yuan
- Chongqing Research Center for Pharmaceutical Engineering, Chongqing Medical University, Chongqing 400016, China
| | - Xue Zhang
- Chongqing Research Center for Pharmaceutical Engineering, Chongqing Medical University, Chongqing 400016, China
| | - Yao Li
- Chongqing Research Center for Pharmaceutical Engineering, Chongqing Medical University, Chongqing 400016, China
| | - Shenglei Yan
- Chongqing Research Center for Pharmaceutical Engineering, Chongqing Medical University, Chongqing 400016, China
| | - Jingqing Zhang
- Chongqing Research Center for Pharmaceutical Engineering, Chongqing Medical University, Chongqing 400016, China
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Effect of local anesthetics on serotonin1A receptor function. Chem Phys Lipids 2016; 201:41-49. [DOI: 10.1016/j.chemphyslip.2016.11.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2016] [Revised: 10/27/2016] [Accepted: 11/01/2016] [Indexed: 01/05/2023]
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Reddy ST, Shrivastava S, Mallesham K, Chattopadhyay A. Cholesterol-dependent thermotropic behavior and organization of neuronal membranes. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2016; 1858:2611-2616. [PMID: 27453199 DOI: 10.1016/j.bbamem.2016.07.007] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2016] [Revised: 07/15/2016] [Accepted: 07/19/2016] [Indexed: 12/31/2022]
Abstract
The composition of neuronal membranes is unique with diverse lipid composition due to evolutionary requirement. The organization and dynamics of neuronal membranes are crucial for efficient functioning of neuronal receptors. We have previously established hippocampal membranes as a convenient natural source for exploring lipid-protein interactions, and organization of neuronal receptors. Keeping in mind the pathophysiological role of neuronal cholesterol, in this work, we used differential scanning calorimetry (DSC) and small angle X-ray scattering (SAXS) to explore thermotropic phase behavior and organization (thickness) of hippocampal membranes under conditions of varying cholesterol content. Our results show that the apparent phase transition temperature of hippocampal membranes displays characteristic linear dependence on membrane cholesterol content. These results are in contrast to earlier results with binary lipid mixtures containing cholesterol where phase transition temperature was found to be not significantly dependent on cholesterol concentration. Interestingly, SAXS data showed that hippocampal membrane thickness remained more or less invariant, irrespective of cholesterol content. We believe that these results constitute one of the early reports on the thermotropic phase behavior and organizational characterization of hippocampal membranes under varying cholesterol content. These results could have implications in the functioning of neuronal receptors in healthy and diseased states.
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Affiliation(s)
- S Thirupathi Reddy
- CSIR-Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad 500007, India
| | - Sandeep Shrivastava
- CSIR-Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad 500007, India
| | - K Mallesham
- CSIR-Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad 500007, India
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Shrivastava S, Dutta D, Chattopadhyay A. Effect of local anesthetics on the organization and dynamics in membranes of varying phase: A fluorescence approach. Chem Phys Lipids 2016; 198:21-7. [DOI: 10.1016/j.chemphyslip.2016.04.009] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2016] [Accepted: 04/29/2016] [Indexed: 01/21/2023]
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