A novel deep recurrent convolutional neural network for subthalamic nucleus localization using local field potential signals

STN localization using local field potentials based on wavelet packet features and stacking ensemble learning

BACKGROUND

DBS entails the insertion of an electrode into the patient brain, enabling Subthalamic nucleus (STN) stimulation. Accurate delineation of STN borders is a critical but time-consuming task, traditionally reliant on the neurosurgeon experience in deciphering the intricacies of microelectrode recording (MER). While clinical outcomes of MER have been satisfactory, they involve certain risks to patient safety. Recently, there has been a growing interest in exploring the potential of local field potentials (LFP) due to their correlation with the STN motor territory.

METHOD

A novel STN detection system, integrating LFP and wavelet packet transform (WPT) with stacking ensemble learning, is developed. Initial steps involve the inclusion of soft thresholding to increase robustness to LFP variability. Subsequently, non-linear WPT features are extracted. Finally, a unique ensemble model, comprising a dual-layer structure, is developed for STN localization. We harnessed the capabilities of support vector machine, Decision tree and k-Nearest Neighbor in conjunction with long short-term memory (LSTM) network. LSTM is pivotal for assigning adequate weights to every base model.

RESULTS

Results reveal that the proposed model achieved a remarkable accuracy and F1-score of 89.49% and 91.63%.

COMPARISON WITH EXISTING METHODS

Ensemble model demonstrated superior performance when compared to standalone base models and existing meta techniques.

CONCLUSION

This framework is envisioned to enhance the efficiency of DBS surgery and reduce the reliance on clinician experience for precise STN detection. This achievement is strategically significant to serve as an invaluable tool for refining the electrode trajectory, potentially replacing the current methodology based on MER.

ANet: Autoencoder-Based Local Field Potential Feature Extractor for Evaluating an Antidepressant Effect in Mice After Administering Kratom Leaf Extracts

Kratom (KT) typically exerts antidepressant (AD) effects. However, evaluating which form of KT extracts possesses AD properties similar to the standard AD fluoxetine (flu) remained challenging. Here, we adopted an autoencoder (AE)-based anomaly detector called ANet to measure the similarity of mice's local field potential (LFP) features that responded to KT leave extracts and AD flu. The features that responded to KT syrup had the highest similarity to those that responded to the AD flu at 87.11 ± 0.25%. This finding presents the higher feasibility of using KT syrup as an alternative substance for depressant therapy than KT alkaloids and KT aqueous, which are the other candidates in this study. Apart from the similarity measurement, we utilized ANet as a multi-task AE and evaluated the performance in discriminating multi-class LFP responses corresponding to the effect of different KT extracts and AD flu simultaneously. Furthermore, we visualized learned latent features among LFP responses qualitatively and quantitatively as t-SNE projection and maximum mean discrepancy distance, respectively. The classification results reported the accuracy and F1-score of 90.11 ± 0.11% and 90.08 ± 0.00%. In summary, the outcomes of this research might help therapeutic design devices for an alternative substance profile evaluation, such as Kratom-based form, in real-world applications.

High Classification Accuracy of Touch Locations from S1 LFPs Using CNNs and Fastai

The primary somatosensory cortex (S1) is a region often targeted for input via somatosensory neuroprosthesis as tactile and proprioception are represented in S1. How this information is represented is an ongoing area of research. Neural signals are high-dimensional, making accurate models for decoding a significant challenge. Artificial neural networks (ANNs) have proven efficient at classification tasks in multiple fields. Moreover, ANNs allow for transfer learning, which exploits feature extraction trained on a large and more general dataset than may be available for a particular problem. In this work, convolutional neural networks (CNN), used for image recognition, were fine-tuned with somatosensory cortical recordings during experiments with naturalistic touch stimuli. We created a highly accurate ( correct) classifier for cutaneous stimulation locations as part of a somatosensory neuroprosthesis pipeline. Here we present the classifier results. Clinical Relevance- Our work provides a method for classifying cortical activity in brain-machine interface applications, specifically towards somatosensory neuroprosthetics.