Microbial community structures in a closed raw water distribution system biofilm as revealed by 454-pyrosequencing analysis and the effect of microbial biofilm communities on raw water quality

Pyrrhotite promote aerobic granular sludge formation in dye wastewater: pH, interfacial free energy, and microbial community evolution

This study introduces a technique utilizing natural pyrrhotite powder as a nucleating agent in four sequencing batch reactors (SBRs) for the treatment of dye wastewater. Through analysis of various factors including pH, pyrrhotite surface free energy, sludge zeta potential, and shifts in microbial communities, the mechanism by which pyrrhotite facilitates the formation of aerobic granular sludge (AGS) is elucidated. Over 140 days of continuous operation under neutral conditions, natural pyrrhotite rapidly cultivated AGS under neutral conditions. The structure of the sludge was compact and the settling properties were satisfactory (SVI30/SVI5 close to 1). Reductions in both sludge zeta potential and interfacial free energy of pyrrhotite correlated with increased hydrophobicity of AGS, leading to enhanced sludge aggregation. Changes in pH, sludge interfacial free energy, and zeta potential were found to influence the microbial community composition and diversity within the sludge.This study provides a novel approach for dye wastewater treatment.

Biofilm formation dynamics in long-distance water conveyance pipelines: Impacts of nutrient levels and metal stress

Biofilm formation in long-distance water conveyance pipelines poses significant risks to water quality, particularly under varying nutrient levels and heavy metal stress. However, the impacts of pipeline material on biofilm formation dynamics under different raw water conditions remain elusive. This study investigated the effects of nutrient availability and Fe-Mn stress on biofilm development, structural stability, bacterial community composition, and the occurrence of viable but non-culturable (VBNC) bacteria. Using reactors with different nutrient conditions, we observed that increased nutrient levels promote biofilm growth but lead to greater instability, heightening the risk of secondary contamination. Notably, nutrient escalation beyond a critical threshold had a diminishing impact on biofilm community composition. Additionally, Fe-Mn stress, while initially enhancing microbial adhesion and metabolic activity, ultimately inhibited biofilm formation over time and increases the prevalence of VBNC bacteria, particularly on stainless steel (SS) surfaces. Our findings also highlighted the importance of material selection for pipelines, with polyvinyl chloride (PVC) showing reduced biofilm formation compared to SS, making it a more suitable option for transporting raw water in environments with high metal content. Dispersal limitation determined the bacterial community assembly during the biofilm formation, accounting for 64.53-90.67 % of the variability in different scenarios. These insights offer valuable guidance for managing biofilm-related issues in water distribution systems, emphasizing the need for careful control of nutrient levels and material choice to ensure water safety over long distances.

Novel insights on ecological responses of short- and long-chain perfluorocarboxylic acids in constructed wetlands coupled with modified basalt fiber bio-nest

The first investigation based on constructed wetlands coupled with modified basalt fiber bio-nest (MBF-CWs) was performed under exposure of short- and long-chain perfluorocarboxylic acids (PFCAs). In general, both perfluorooctanoic acid (PFOA) and perfluorobutanoic acid (PFBA) caused significant decline of chemical oxygen demand removal by 10.83 % and 4.73 %. However, only PFOA led to marked inhibition on total phosphorus removal by 12.51 % in whole duration. Suppression of removal performance resulted from side impacts on microbes by PFOA. For instance, activities of key enzymes like dehydrogenase (DHA), urease (URE), and phosphatase (PST) decreased by 52.77 %, 40.70 %, and 56.94 % in maximum under PFOA stress, while URE could alleviate over time. By contrast, distinct inhibition was only found on PST in later phases with PFBA exposure. PFCAs had adverse influence on alpha diversity of MBF-CWs, particularly long-chain PFOA. Both PFCAs caused enrichment of Proteobacteria, owing to increase of Gammaproteobacteria and Plasticicumulans by 22.04-35.79 % and 22.91-219.77 %. Nevertheless, some dominant phyla (like Bacteroidota and Acidobacteriota) and genera (like SC-I-84, Thauera, Subgroup_10, and Ellin6067) were only suppressed by PFOA, causing more hazards to microbial decontamination than PFBA did. As for plants, chlorophyll contents tend to decrease with PFOA treatment. Whereas, higher antioxidase activities and more lipid peroxidation products were uncovered in PFOA group, demonstrating more reactive oxygen species brought by long-chain PFCAs. This work offered new findings about ecological effects of MBF-CWs under PFCAs exposure, evaluating stability and sustainability of MBF-CW systems to treat sewage containing complex PFCAs.

Changes in microbial community during hydrolyzed sludge reduction

In this study, the effects of different enzymes (lysozyme, α-amylase and neutral protease) on sludge hydrolysis efficiency and microbial community in sequencing batch reactor (SBR) were introduced. The results showed that the hydrolysis efficiencies of the three enzymes were 48.5, 22.5 and 31%, respectively, compared with the accumulated sludge discharge of the blank control group. However, it has varying degrees of impact on the effluent quality, and the denitrification and phosphorus removal effect of the system deteriorates. The lysozyme that achieves the optimal sludge hydrolysis effect of 48.5% has the greatest impact on the chemical oxygen demand (COD), total nitrogen (TN), and nitrate nitrogen (NO3--N) of the effluent. The sludge samples of the control group and the groups supplemented with different enzyme preparations were subjected to high-throughput sequencing. It was found that the number of OTUs (Operational Taxonomic Units) of the samples was lysozyme > α-amylase > blank control > neutral protease. Moreover, the abundance grade curve of the sludge samples supplemented with lysozyme and α-amylase was smoother, and the community richness and diversity were improved by lysozyme and α-amylase. The species diversity of the sludge supplemented with lysozyme and neutral protease was great, and the community succession was obvious. The introduction of enzymes did not change the main microbial communities of the sludge, which were mainly Proteobacteria, Actinobacteria and Bacteroidetes. The effects of three enzyme preparations on sludge reduction and microbial diversity during pilot operation were analyzed, the gap in microbial research was filled, which provided theoretical value for the practical operation of enzymatic sludge reduction.

Aquifer clogging caused by chlorine disinfection during the reclaimed water recharge

Aquifer clogging plays a critical role in the efficiency of reclaimed water recharge. While chlorine disinfection is commonly used for reclaimed water, its impact on clogging has seldom been discussed. Thus, this study aimed to investigate the mechanism of chlorine disinfection on clogging by establishing a lab-scale reclaimed water recharge system that utilized chlorine-treated secondary effluent as feed water. The findings indicated that increasing the chlorine concentration led to a surge in the total amount of suspended particles, and the median particle size increased from 2.65 μm to 10.58 μm. Furthermore, the fluorescence intensity of dissolved organic matter decreased by 20%, with 80% of these compounds, including humic acid, becoming entrapped within the porous media. Additionally, the formation of biofilms was also found to be promoted. Microbial community structure analysis unveiled a consistent dominance of Proteobacteria consistently exceeded 50% in relative abundance. Moreover, the relative abundance of Firmicutes increased from 0.19% to 26.28%, thereby verifying their strong tolerance to chlorine disinfection. These results showed that higher chlorine concentrations could stimulate microorganisms to secrete an increased quantity of extracellular polymeric substance (EPS) and form a coexistence system with the trapped particles and natural organic matter (NOM) within the porous media. Consequently, this supported the formation of biofilms, thereby potentially elevating the risk of aquifer clogging.

Simultaneous nitrate and sulfate biotransformation driven by different substrates: comparison of carbon sources and metabolic pathways at different C/N ratios

Nitrate (NO₃^-) and sulfate (SO₄^2-) often coexist in organic wastewater. The effects of different substrates on NO₃^- and SO₄^2- biotransformation pathways at various C/N ratios were investigated in this study. This study used an activated sludge process for simultaneous desulfurization and denitrification in an integrated sequencing batch bioreactor. The results revealed that the most complete removals of NO₃^- and SO₄^2- were achieved at a C/N ratio of 5 in integrated simultaneous desulfurization and denitrification (ISDD). Reactor Rb (sodium succinate) displayed a higher SO₄^2- removal efficiency (93.79%) with lower chemical oxygen demand (COD) consumption (85.72%) than reactor Ra (sodium acetate) on account of almost 100% removal of NO₃^- in both Ra and Rb. Ra produced more S^2- (5.96 mg L^-1) and H₂S (25 mg L^-1) than Rb, which regulated the biotransformation of NO₃^- from denitrification to dissimilatory nitrate reduction to ammonium (DNRA), whereas almost no H₂S accumulated in Rb which can avoid secondary pollution. Sodium acetate-supported systems were found to favor the growth of DNRA bacteria (Desulfovibrio); although denitrifying bacteria (DNB) and sulfate-reducing bacteria (SRB) were found to co-exist in both systems, Rb has a greater keystone taxa diversity. Furthermore, the potential carbon metabolic pathways of the two carbon sources have been predicted. Both succinate and acetate could be generated in reactor Rb through the citrate cycle and the acetyl-CoA pathway. The high prevalence of four-carbon metabolism in Ra suggests that the carbon metabolism of sodium acetate is significantly improved at a C/N ratio of 5. This study has clarified the biotransformation mechanisms of NO₃^- and SO₄^2- in the presence of different substrates and the potential carbon metabolism pathway, which is expected to provide new ideas for the simultaneous removal of NO₃^- and SO₄^2- from different media.

Insights into the role of prechlorination in algae-laden raw water distribution process: Algal organic matter and microcystin-LR release, extracellular polymeric substances (EPS) aggregation, and pipeline biofilm communities

Prechlorination routinely applied for the treatment of algae-laden raw water has received extensive attention due to its influence on water quality and aquatic microbes. In this study, prechlorination experiments with different doses were conducted in sets of model raw water distribution systems. With the elevated dose of chlorine and prolonged hydraulic retention time (HRT), the ratio of intact algal cells decreased, and the stability of water enhanced. Dissolved organic carbon (DOC) and nitrogen (DON) increased when chlorine dose elevated from 0 to 0.5 mg/L but decreased with elevations from 0.5 to 2.0 mg/L, while UV₂₅₄ showed a monotonically increasing tendency. DOC, DON and extracellular microcystin-LR increase initially and decrease thereafter with the prolonged HRT. Notably, the effects of prechlorination on extracellular polymeric substances aggregation behavior on pipe walls and microbial community composition was revealed, providing more profound understanding of the community dynamics in this engineered system. This study helped optimize strategies to improve the stability and efficiency of pretreatment of algae-laden water.

Spatiotemporal Dynamics of Bacterial Taxonomic and Functional Profiles in Estuarine Intertidal Soils of China Coastal Zone

Bacteria play an important role in regulating carbon (C), nitrogen (N), and sulfur (S) in estuarine intertidal wetlands. To gain insights into the ecological and metabolic modes possessed by bacteria in estuarine intertidal wetlands, a total of 78 surface soil samples were collected from China's coastal intertidal wetlands to examine the spatial and seasonal variations of bacterial taxonomic composition, assembly processes, and ecological system functions through shotgun metagenomic and 16S rRNA gene sequencing. Obvious spatiotemporal dynamic patterns in the bacterial community structure were identified, with more pronounced seasonal rather than spatial variations. Dispersion limitation was observed to act as a critical factor affecting community assembly, explaining approximately half of the total variation in the bacterial community. Functional bacterial community structure exhibited a more significant latitudinal change than seasonal variability, highlighting that functional stability of the bacterial communities differed with their taxonomic variability. Identification of biogeochemically related links between C, N, and S cycles in the soils showed the adaptive routed metabolism of the bacterial communities and the strong interactions between coupled metabolic pathways. Our study broadens the insights into the taxonomic and functional profiles of bacteria in China's estuarine intertidal soils and helps us understand the effects exerted by environmental factors on the ecological health and microbial diversity of estuarine intertidal flats.

Aerobic granulation and microbial community succession in sequencing batch reactors treating the low strength wastewater: The dual effects of weak magnetic field and exogenous signal molecule

The application of magneto-biological effects in wastewater treatment has been brought under the spotlight recently. This work explored the dual effects of magnetic field (MF) and exogenous N-hexanoyl-l-homoserine lactone (C₆-HSL) on activated sludge granulation. Results showed that exposure to MF and C₆-HSL obviously accelerated the aerobic granulation process and promoted the secretion of extracellular polymeric substances, especially polysaccharides, humic acid-like substances, aromatic proteins, and tryptophan-like substrates. Illumina MiSeq sequencing results indicated that the introduction of MF and C₆-HSL can increase the diversity and richness of microbial community without antagonism, and the biological basis for rapid granulation process in this study was the enrichment of slow-growing bacteria Candidatus_Competibacter. Besides, the overgrowth of filamentous bacteria Thiothrix could be suppressed due to the presence of MF, improving the stabilities of aerobic granular sludge. This study provides a new understanding of the MF and C₆-HSL effects on rapid aerobic granulation when treating the low-strength wastewater.

Fate characteristics, exposure risk, and control strategy of typical antibiotics in Chinese sewerage system: A review

In China, the sewerage system plays an essential role in antibiotic removal; however, the fate profiles of antibiotics in sewers are not well understood, and risk identification throughout the sewerage system is inadequate. Based on the extensive detection results for typical groups of antibiotics in the discharge sources, influent and effluent from wastewater treatment plants (WWTPs), and excess sludge, a comprehensive evaluation was conducted to reveal the elimination profiles of the antibiotics, identify the fate characteristics in both sewers and WWTPs, assess the exposure risk levels, and propose a control strategy. The total concentration (based on the median concentrations of the target antibiotics) in aqueous waters was estimated to decrease from 7383.4 ng/L at the discharge source to 886.6 ng/L in the WWTP effluent, among which 69.6% was reduced by sewers and 18.4% was reduced by WWTPs. Antibiotic reduction in sewers was a combined effect of dilution, physiochemical reactions, sorption, biodegradation, and retransformation, and the A2O-MBR + ozonation process in the WWTPs exhibited superior performance in diminishing antibiotics. Notably, accumulated antibiotics in the excess sludge posed a high risk to natural environments (with a risk quotient of approximately 13.0), and the potential risk during combined sewer overflows (CSOs) was undetermined. Thus, enhanced sludge treatment techniques, accurate risk prediction, and proper precautions at CSOs are required to mitigate potential risk. A novel scheme involving an accurate estimation of discharge loads, preliminary treatment of highly concentrated discharge sources, and synergic control in sewers was proposed to eliminate antibiotics at the front end of pipes.

Understanding the effect of residual aluminum salt coagulant on activated sludge in sequencing batch reactor: Performance response, activity restoration and microbial community evolution

To investigate the effect of residual coagulant after coagulation pretreatment on activated sludge system of wastewater treatment plants (WWTPs), comparative evaluation of lab-scale sequencing batch reactors under different poly-aluminum chloride (PAC) concentrations (20 and 55 mg/L), presenting the performance differences of reactors. Results showed that the PAC concentration of 20 mg/L slightly enhanced the average removal efficiencies of chemical oxygen demand (COD) and total nitrogen (TN), up to 93.43% and 72.52%. Whereas, an inhibition effect was exerted at the PAC concentration of 55 mg/L, the average removal efficiencies decreased to 88.56% and 57.80% respectively. Similarly, the residual aluminum salts showed a concentration effect of low promotion and high inhibition on sludge activity index. The content of specific oxygen utilization rate (SOUR) and dehydrogenase (DHA) sharply decreased by 30.17% and 53.56% under the high PAC concentration of 55 mg/L. Activity recovery phase showed that the suppression of aluminum salt coagulant on biological system was reversible. High-throughput sequencing presented that the relative abundance of microbes showed obvious variations at different PAC concentrations, and certain bacteria in Chloroflexi and Bacteroidota exhibited better adaptability to the high PAC concentration environment. Nevertheless, the antagonism action between denitrifying genera and other genera as well as the downregulation of functional enzymes regarding nitrogen metabolism gave rise to the deterioration of denitrification under the high PAC concentration of 55 mg/L. This study revealed the influence mechanism of residual aluminum salt coagulant on activated sludge system, providing strategies for efficient decontamination and long-term stable operation of biological system in wastewater treatment plant under the condition of adding PAC.

Control strategies for biofilm control in reclaimed water distribution systems from the perspective of microbial antagonism and electrochemistry

Biofilm formation in reclaimed water (RW) distribution systems presents significant technical challenges to RW utilization. Two main technologies to control biofilm formation, microbial antagonism (MA) and electrochemical oxidation (EO), are not yet widely used in drip irrigation systems (DIS) and their mechanisms of action need further clarification. In this study, we first showed that the MA and EO treatments reduced biofilm formation by about 62% and 68%, respectively, and extracellular polymeric substance (EPS) content by 14% and 49%, respectively, in biofilms compared with raw RW type 1 (R-RW1) in unused pipes, thus effectively improving the performance of DIS. When MA-RW and EO-RW were applied to already clogged systems, the degree of clogging alleviation varied depending on the severity of the original clogging. We recommend adding the antagonist, Bacillus subtilis, to RW at 25% clogging for the maximum effect and to slow the microbial adaptation process. Compared to MA, the recovery effect of EO was slower initially but lasted longer and had a significantly better alleviating effect on severely clogged pipelines. Illumina Mi-SEQ high-throughput sequencing data showed that both MA and EO resulted in a significant decrease in microbial diversity, dynamic changes in bacterial community structure, and disruption of network interaction and network modularity. Meanwhile, both treatments promoted the growth of specific microorganisms, enhanced the interaction between certain microbial components, and improved the efficiency of information, matter, and energy exchange within the modules. In summary, we verified the dredging effect of two strategies on DIS under different water conditions, revealed the differences in their mechanisms of action, and proposed their application scenarios. Our results will help improve the efficiency of RW in agricultural drip irrigation systems and effectively reduce maintenance costs.

Field study on the characteristics of scales in damaged multi-material water supply pipelines: Insights into heavy metal and biological stability

Microbial corrosion and heavy metal accumulation in metal water supply pipelines aggravate scale formation and may result in pipeline leakage or bursting events. To better understand the corrosion and corrosion products in the damaged pipes, deposits excavated from three damaged pipes after 22-26 year service periods were analyzed. Using a combination of advanced micro-mineral techniques and 16S rRNA high-throughput sequencing, the micromorphology, chemical composition, and bacterial community were investigated systematically. Unlined pipe wall scales ruptured while lined pipes leaked due to joint scales. Dendrogram correlation results demonstrated that V/As, Al/Pb, and Cr/Mn clusters exhibited co-adsorption and co-precipitation characteristics. FTIR and XRD analysis detected the presence of γ-FeOOH, α-FeOOH in loose scales, and Fe₃O₄ in rigid scales. Scales were colonized by various corrosion bacteria, with sulfate reducing bacteria and ammonia producing bacteria being dominant in the scales of anticorrosive and non-corrosive pipe, respectively. Tl, Ca, Al, and Pb exhibited an extremely positive correlation with Rhodocyclaceae, Ferritrophicum, Thermodesulfovibrionia, and Clostridiaceae. Al and V presented a potential Hazard Quotient risk to consumers, while Cd was potentially bioavailable in all inner scales. Overall, this study provides valuable information for the effective management and avoidance of corrosion-induced pipeline damage and heavy metal release.

Performances and mechanisms of microbial nitrate removal coupling sediment-based biochar and nanoscale zero-valent iron

Immobilized microorganism technology has attracted increasing attention for high concentration of microbes, low cell loss and high resistance to impact of environment. The microbial reduction of nitrate in the presence of sediment-based biochar (SBC) and nanoscale zero-valent iron (nZVI) was investigated in four different free systems. NZVI-SBC/bacteria system realized the best nitrate removal of 97.61% within 3 days through the synergistic effect of SBC and nZVI on denitrifying bacteria. Accumulation of nitrite and ammonium in nZVI-SBC/bacteria system also decreased. High-throughput sequencing results showed that the proportion of denitrifying bacteria in microbial community structure increased after adding nZVI-SBC. The performance of nitrate removal was then studied through PVA/SA-immobilization. Immobilized active pellets performed better nitrate removal (98.89%) and stronger tolerance under different conditions than the free bacterial cells. Overall, this study provided a promising approach by utilizing SBC and nZVI for the bio-remediation of nitrate-contaminated water in practical application.

Enhancing 2,6-dichlorophenol degradation and nitrate removal in the nano-zero-valent iron (nZVI) solid-phase denitrification system

Nano-zero-valent iron (nZVI), as a typical nano-material, has been recently used in wastewater treatment and combination with bioreactors. Using nZVI coupled denitrification system research the effect and influence of nZVI enhanced denitrification sludge on the degradation of toxic compounds and system performance. The nZVI coupled denitrification system showed better resistance to 2,6-DCP impact, and the concentrations of effluent NO₂^- and NO₃^- were below 2.0 mg/L. At the same time, the addition of nZVI enabled the denitrification system to quickly adapt to the toxic environment of 2,6-DCP within 15 days, and the degradation efficiency of 2,6-DCP reached 99.9%. The released SMP reduced after nZVI coupled with denitrification sludge in 2,6-DCP environment, which could improve the effluent water quality. Nuclear magnetic resonance spectroscopy showed that the addition of nZVI would change the structure of EPS in denitrification sludge. After 90 days of operation, the dominant bacteria in the denitrifying sludge have undergone great changes. Moreover, Thauera was responsible as the dominant bacteria for degrading 2,6-DCP in the denitrification system. The increased in the proportion of functional bacteria with nitrate_reduction, nitrogen_respiration, nitrate_respiration and nitrite_respiration in the presence of NZVI further reveals the mechanism of enhanced denitrification.

Rapidly achieving and optimizing simultaneous partial nitrification denitrification and anammox integrated process by hydroxylamine addition for advanced nitrogen removal from domestic wastewater

The achievement and stable maintenance of partial nitrification and partial anammox process for municipal sewage is a challenging research topic at present. In this study, a novel strategy of hydroxylamine (NH₂OH) addition under low DO condition was adopted for rapidly achieving simultaneous partial nitrification denitrification and anammox process (SPNDA) to deal with domestic wastewater, the nitrite accumulation ratio (NAR) increased from 1% to 82% in the first 4 days. After the addition of NH₂OH was stopped, the PN effect of SPNDA process remained relatively stable within 100 days. During the stable operation period with aerobic HRT of 5 h, the nitrogen removal efficiency was 87.9 ± 4.2%. Moreover, the abundance of denitrifying bacteria and Candidatus Brocadia increased from 1.79% and 0.062% to 22.49% and 0.38% respectively, which promoted nitrogen removal effect. Overall, this study provided a quickly way for achieving the cost-effective SPNDA process to enhance nitrogen removal with NH₂OH addition.

Variation of carbonaceous disinfectants by-products precursors and their correlation with molecular characteristics of dissolved organic matter and microbial communities in a raw water distribution system

The raw water distribution systems (RWDSs) play key roles in urban water supply systems. The changes of disinfection byproducts (DBPs) precursors of trihalomethanes (THMs), haloacetic acids (HAAs) and halogenated acetaldehydes (HALs) in the RWDS in Taihu Basin were investigated by formation potentials. Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) method and 454-pyrosequencing were employed to study the variation of molecular characteristics of low molecular weight-dissolved organic matter (LMW-DOM) and microbial communities of pipeline biofilms respectively, which played crucial roles in the variation of DBPs precursors. The results showed that both DBPs precursors and the molecular characteristics of LMW-DOM in the RWDS had changed. Moreover, the LMW-DOM could be an indicator due to the good positive correlation with precursors of HAAs and HALs. Specifically, the LMW-DOM showed continuous accumulation in the RWDS. The LMW-DOM tended to possess higher m/z and more CH₂ or long alkyl chains while pre-chlorination controlled this trend. The LMW-DOM in the pre-chlorinated pipe section also possessed higher saturation. Additionally, lignins served as an important part of DBPs precursors and dominated the LMW-DOM. The microbial diversity decreased in the RWDS, and the abundance and diversity of the microbial community in the pre-chlorinated section were significantly lower than those in the no-chlorinated section. Finally, most DBPs precursors had positive correlation with dominant phylum and genus in RWDS. This study reveals variation of DBPs precursors, LMW-DOM and microbial pipeline biofilms as well, and provide important data for further research on raw water safety and stability in RWDSs.

Impact of acyl-homoserine lactones on the response of nitrogen cycling in sediment to florfenicol stress

Antibiotic residuals disrupt environmental microbial metabolism and can alter the nitrogen cycle. Quorum sensing has both inter- and intra-species effects that are directly related to the population densities necessary for microbial nitrogen cycling. Here, we explored how acyl-homoserine lactones (AHLs) can change the response of nitrogen cycling to florfenicol in sediments. AHLs might promote microbial reproduction in sediment under florfenicol stress. The relative abundances of Proteobacteria and Euryarchaeota in the antibiotic and AHL treatment groups were higher than those in the control group. AHLs reduced the effects of antibiotics on the abundance of Nitrospira at sampling times of 3d, 10d, and 20d. In the annotation results, nitrate reductase showed the highest abundance, followed by nitrite reductase, nitrogenase, nitric oxide (NO) reductase, nitrous oxide reductase, and ammonia monooxygenase. The abundances of these genes have changed in response to pressure by florfenicol and the addition of AHLs. We also found significant associations between the nitrogen cycle-related functional genes and dominant genera. In particular, glutamate metabolic enzymes and nitrate/nitrite transporters were the primary participants in correlation. Florfenicol can rapidly alter microbial community structures in sediments, affect the functional diversity of microorganisms, and hinder the nitrogen cycle. The response of microorganisms to florfenicol was regulated by the addition of AHLs. This process might alter the use and production of nitrogenous substances in the environment by functional communities in sediments.

Visualizing, quantifying, and controlling local hydrodynamic effects on biofilm accumulation in complex flow paths

Complex flow paths (CFPs) are commonly applied in precision equipment to accurately supply controllable fluids with designed structures. However, the presence of biofilms in CFPs causes quite a few unwanted issues, such as bio-erosion, clogging, or even health risks. To date, visualizing and quantifying the interaction between biofilm distribution and local hydrodynamics remains difficult, and the mechanism during the process is unclear. In this paper, the remodeling simulation method (3D industrial computed tomography scanning-inverse modeling-numerical simulation) and 16S rRNA high-throughput sequencing were integrated. The results indicated that local hydrodynamic characteristics significantly affected biofilm thicknesses on CFP surfaces (relative differences of 41.3-71.2%), which inversely influenced the local turbulence intensity. The average biofilm thicknesses exhibited a significant quadratic correlation with the near-wall hydraulic shear forces (r > 0.72, p < 0.05), and the biofilm reached a maximum thickness at 0.36-0.45 Pa. On the other hand, the near-wall hydraulic shear forces not only affected microbial community characteristics of biofilms, but they also influenced the number of microorganisms involved, which determined the biofilm accumulation thereafter. The PHYLUM Firmicutes and Proteobacteria were the dominant bacteria during the process. The results obtained in this paper could provide practical conceptions for the targeted control of biofilms and put forward more efficient controlling methods in commonly applied CFP systems.

Formation of filamentous fungal pellets in aerobic granular sludge via reducing temperature and dissolved oxygen: Characteristics of filamentous fungi and denitrification performance

A lab-scale sequencing batch reactor (SBR) using glucose as carbon source was operated for 500 days to investigate the formation of filamentous organisms and their function on stability of AGS system. After 250 days' stable operation under conditions of 25 ± 2 °C and dissolved oxygen (DO) of 4-5 mg/L (stage I), the temperature and DO were reduced to 10 ± 2 °C and DO of 1-2 mg/L until 280 days (stage II), to induce the growth of filamentous microorganisms. After that until 500 days (stage III), overgrowth of filamentous microorganisms with relative abundances of up to 19.46%, formation of black filamentous fungal pellets, and reconstruction of AGS granules were observed in turn. The relation between settling of AGS (SVI 30-72 mL/g) and filamentous microorganisms was revealed. Filamentous pellets were purified and identified as fungal Bradymyces and Knufia, with stronger denitrification performance on nitrite than nitrate. The results indicated that filamentous fungal pellets contributed to good sludge settling performance and promoted the denitrification process in AGS.

Effects of vegetation on bacterial communities, carbon and nitrogen in dryland soil surfaces: implications for shrub encroachment in the southwest Kalahari

Shrub encroachment is occurring in many of the world's drylands, but its impacts on ecosystem structure and function are still poorly understood. In particular, it remains unclear how shrub encroachment affects dryland soil surfaces, including biological soil crust (biocrust) communities. In this study, soil surfaces (0-1 cm depth) were sampled from areas of Grewia flava shrubs and Eragrostis lehmanniana and Schmidtia kalahariensis grasses in the southwest Kalahari during two different seasons (March and November). Our hypothesis is that the presence of different vegetation cover types (shrubs versus grasses) alters the microbial composition of soil surfaces owing to their contrasting microenvironments. The results showed that more significant differences in microclimate (light, soil surface temperatures) and soil surface microbial communities were observed between shrubs and grasses than between sampling seasons. Based on high-throughput 16S rRNA gene sequencing, our findings showed that approximately one third (33.5%) of the operational taxonomic units (OTUs) occurred exclusively in soil surfaces beneath shrubs. Soil surfaces with biocrusts in grass areas were dominated by the cyanobacteria Microcoleus steenstrupii, whereas the soil surfaces beneath shrubs were dominated by the proteobacteria Microvirga flocculans. Soil surfaces beneath shrubs are associated with reduced cyanobacterial abundance but have higher total carbon and total nitrogen contents compared to biocrusts in grass areas. These findings infer changes in the relative contributions from different sources of carbon and nitrogen (e.g. cyanobacterial and non-cyanobacterial fixation, plant litter, animal activity). The distinctive microbial composition and higher carbon and nitrogen contents in soil surfaces beneath shrubs may provide a positive feedback mechanism promoting shrub encroachment, which helps to explain why the phenomenon is commonly observed to be irreversible.

Calcium nitrate as a bio-stimulant for anaerobic ammonium oxidation process

This study explored the role of calcium nitrate as a bio-stimulant for anaerobic ammonium oxidation (anammox) process. The anaerobic sequencing batch reactor was firstly inoculated with malodorous river sediment and only fed with calcium nitrate until no marked endogenous release of ammonium in effluent (Phase 1). Subsequently, nitrite and ammonium were supplied to test the performance of anammox process (Phase 2). During the operation of Phase 1, the effluent ammonium increased firstly and then decreased. Additionally, continuous nitrite (about 1.54 mgN/L) was observed in the effluent. The microbial analysis showed the simultaneous increase of the relative abundance of heterotrophic denitrifier Denitratisoma and sulfur autotrophic denitrifier Thiobacillus from 0.15% to 5.37% and 0.21% to 4.19%, respectively. Besides, ¹⁵N isotopes trace and qPCR results showed that the contribution of anammox to total nitrogen (TN) removal increased from 3.07% to 27.6%, and that the anammox functional gene hzsB increased from 1.37 × 10⁵ to 2.90 × 10⁶ copies/g. These results indicated that calcium nitrate may induce partial mixotrophic denitrification (heterotrophic and sulfur autotrophic denitrification) to provide nitrite as electron acceptor for anammox, thus promoting the occurrence of anammox. In Phase 2, rapid ammonium and TN removal were accomplished in the initial operation with the reduction efficiency of 80.1% and 90.0%, respectively. The relative abundance of anammox bacteria Candidatus_Brocadia significantly increased from 0.01% to 7.15% during the operation of Phase 2. These findings further confirmed the above deduction. Taken together, calcium nitrate can be a promising bio-stimulant for anammox process by promoting the coupling of mixotrophic denitrification with anammox.

Effect of operational strategies on the rapid start-up of nitrogen removal aerobic granular system with dewatered sludge as inoculant

In both sequencing batch reactors with dewatering sludge as inoculant, the strategies by step-feeding (R1) or step-feeding combined with low aeration (R2) were performed under alternating anoxic/aerobic condition to discover superior methods launching nitrogen removal aerobic granule system. Interestingly, two reactors accomplished granulation at day 0, two days later, possessed prominent settling performance (SVI < 45 ml/g. MLSS) and denitrifying ability (TIN > 80%). Thereinto, R2 had lower crushing rate, larger granules, higher biomass and better pollutant removal performance owing to low aeration and more filamentous bacteria on AGS surface. Moreover, effluent NH₄⁺-N was used as indicator of excess filaments due to its quick response for the filaments. After effluent NH₄⁺-N exceeded 5 mg/L, causative filaments Sphaerotilus were effectively inhibited and eliminated by enhancing pH value to 8.0 ± 0.2. As a result, this study provides a new insight into rapid start-up nitrogen removal granule system by promoting and limiting filaments in proper period.

Investigation of nitrogen pollutants transformation and its pathways along the long-distance prechlorinated raw water distribution system

Understanding the transformation pattern of nitrogen (N) pollutants and its pathways in the prechlorinated raw water distribution system (PRWDS) is vital for controlling the stablitiy and safety of raw water qulity. This study investigated the N transformation, N functional genes and their correlations to find the N transformation pathways along the PRWDS. Results suggested that simultaneous nitrification, anaerobic ammonium oxidation and denitrification (SNAD) contribute to the N transformationin the PRWDS. Along the pipeline, anammox 16S rRNA (9.18 × 10⁷-8.41 × 10⁸ copies/g), limited by prechlorination, was the most abundant N functional genes and anammox process was the main pathway of ammonia nitrogen (NH₄⁺-N). The decreasing NH₄⁺-N was connected with Planctomycetes, Nitrospira and abundance of nxrA attributing to the joint effort of anammox and declined nitrification. The concentration of nitrate (NO₃^--N) increasing at first and then decreasing, was correlated positively with Sphingomonas. because of the declined nitritication and increased denitrification. Besides, the NO₃^--N→NO₂^--N process was considered to be primary NO₃^--N transformation pathways. Increases in the concentration of dissolved organic nitrogen (DON) and nitrite (NO₂^--N) observed in the PRWDS had positive correlation with relative abundance of Pseudomonas. We believe that prechlorination shaped the particular bacterialcharacteristics in biofilms and influenced the N transformation pathways indirectly, resulting in the varying N transformation rules in PRWDSs. Moreover, systematic and extended research is particularly vital for determining the effects of changes in source water quality and environmental conditions on bacterial community structure and N conversion along PRWDSs.

Characteristics and Driving Factors of the Aerobic Denitrifying Microbial Community in Baiyangdian Lake, Xiong'an New Area

Here, the ion-exchangeable form of nitrogen (IEF-N), weak-acid extractable form of nitrogen (WAEF-N), strong-alkali extractable form of nitrogen (SAEF-N), strong-oxidant extractable form of nitrogen (SOEF-N), residue nitrogen (Res-N), and total nitrogen (TN) showed spatial differences, and most of the sediment nitrogen fractions exhibited positive correlations in Baiyangdian Lake. High-throughput sequencing analysis revealed that the aerobic denitrification microbial community was composed of proteobacteria (42.04%–99.08%) and unclassified_bacteria (0.92%–57.92%). Moreover, the microbial community exhibited significant differences (R² = 0.4422, P < 0.05) on the basis of the adonis analysis. T(temperature), Moisture content (MC), sediment total phosphorus (STP), ion-exchangeable form of ammonia (IEF-NH₄⁺-N), weak-acid extractable form of ammonia (WAEF-NH₄⁺-N), weak-acid extractable form of nitrate (WAEF-NO₃⁻-N), and strong-alkali extractable form of ammonia (SAEF-NH₄⁺-N) were the dominant environmental factors and explained 11.1%, 8.2%, 10.7%, 6.9%, 9.3%, 8.1%, 10.5%, 7.5%, and 7% variation, respectively, of the total variation in the microbial community. Furthermore, the network analysis showed that symbiotic relationships accounted for a major percentage of the microbial networks. The keystone aerobic denitrifying bacteria belonged to Comamonas, Rhodobacter, Achromobacter, Aeromonas, Azoarcus, Leptothrix_Burkholderiales, Pseudomonas, Thauera, unclassified_Burkholderiales, and unclassified_bacteria. The composition of the keystone aerobic denitrifying microbial community also exhibited significant differences (R² = 0.4534, P < 0.05) on the basis of the adonis analysis. T, STP, IEF-NH₄⁺-N, ion-exchangeable form of nitrate (IEF-NO₃⁻-N), WAEF-NO₃⁻-N, SAEF-NH₄⁺-N, and TN were the dominant environmental factors that explained 8.4%, 6.2%, 4.6%, 5.9%, 5.9%, 4.5%, and 9.4% variation, respectively, of the total variation in the keystone aerobic denitrifying microbial community. The systematic investigation could provide a theoretical foundation for the evolution mechanism of the aerobic denitrifying microbial community in Baiyangdian Lake.

Shift of bacterial community and denitrification functional genes in biofilm electrode reactor in response to high salinity

High salinity suppresses denitrification by inhibiting microorganism activities. The shift of microbial community and denitrification functional genes under salinity gradient was systematically investigated in a biofilm electrode reactor (BER) and biofilm reactor (BR) systems. Denitrification efficiency of both BER and BR was not significantly inhibited during the period of low salinity (0-2.0%). As the salinity increased to 2.5%, BER could overcome the impact of high salinity and maintained a relatively stable denitrification performance, and the effluent NO₃^--N was lower than 1.5 mg/L. High salinity (>2.5%) impoverished microbial diversity and altered the microbial community in both BER and BR. However, two genera Methylophaga and Methyloexplanations were enriched in BER due to electrochemical stimulation, which can tolerate high salinity (>3.0%). The relative abundance of Methylophaga in BER was almost 10 times as much as in BR. Paracoccus is a hydrogen autotrophic denitrifier, which was obviously inhibited with 1.0% NaCl. The hetertrophic denitrifiers were primarily responsible for the nitrate removal in the BER compared to the autotrophic denitrifiers. The abundance and proportion of denitrifying functional genes confirmed that main denitrifiers shift to salt-tolerant species (nirK-type denitrifiers) to reduce the toxic effects. The napA (2.2 × 10⁸ to 6.5 × 10⁸ copies/g biofilm) and nosZ (2.2 × 10⁷ to 4.4 × 10⁷ copies/g biofilm) genes were more abundant in BER compared to BR's, which was attributed to the enrichment of Methylophaga alcalica and Methyloversatilis universalis FAM5 in the BER. The results proved that BER had greater denitrification potential under high salinity (>2.0%) stress at the molecular level.

Impact of static biocarriers on the microbial community, nitrogen removal and membrane fouling in submerged membrane bioreactor at different COD:N ratios

The polyvinyl formal (PVFM) biocarrier addition in a membrane bioreactor (MBR) was evaluated at high and low carbon/nitrogen (C/N) ratio of 20.0 and 6.7. Results indicated that static biocarrier addition could enrich nitrification and denitrification bacteria, dominating by Tauera, Amaricoccus and Nitrosospira at the genus level and slightly improved the total nitrogen removal even at a low C/N ratio. The bulk sludge characteristics (such as bigger particle size, lower SMP, lower SMP P/C) were also significantly changed in the hybrid MBR (HMBR), leading to a more sustainable membrane operation. The biocarrier addition also reduced the relative abundance of Sphingobacterials_unclassified, Ohtaekwangia and Rhodocyclaceae_unclassified at the genus level, indicating less membrane fouling in the HMBR. Consequently, HMBR with static PVFM addition could partially overcome the drawback of low C/N ratio for total nitrogen removal and membrane fouling control, providing a more resilient MBR to the undesirable environment such as low C/N ratio.

Pollutant removal performance and microbial enhancement mechanism by water-lifting and aeration technology in a drinking water reservoir ecosystem

Here, the performance and mechanism of pollutant removal in the Zhoucun reservoir by water-lifting and aeration systems (WLAs) were explored. The hypolimnion anoxic layer disappeared and the reservoir was mixed after the WLAs were operated for approximately 35 days, providing a suitable environment for pollutant removal. Operation of the system enhanced the metabolic activity of the water microbes and their capacity for purification, which contributed to the removal of nitrogen, organic carbon, Fe, Mn, P, and S. Specifically, the total N concentration decreased from 2.55 to 0.48 mg/L, showing an 81.18% removal rate. Microbial metabolism and the diversity index increased following the operation of the WLAs in the Zhoucun Reservoir. Furthermore, the water reservoir clearly inhibited the performance of Fe, Mn, P, and S through the WLA operation, meeting the requirements for class III based on the Chinese Surface Water Environmental Quality Standard (GB3838-2002). High-throughput sequencing analysis revealed increased levels of indicator and keystone operational taxonomic units belonging to Flavobacterium, hgcI_clade, Rheinheimera, Dechloromonas, Pseudomonas, and Rhodocyclaceae, which are related to the degradation of organic carbon and removal of nitrogen and phosphorus. Moreover, total N, ammonia, total P, dissolved oxygen, temperature, and pH were the principal factors affecting the microbial community based on redundancy analysis and the Mantel test. Furthermore, network analysis showed that symbiotic relationships accounted for the major proportion of the microbial network. Our results provide a theoretical foundation for the efficiency of N removal and essential technical support for improving the self-repair capacity of water in drinking water reservoirs.

Molecular Characteristics of Dissolved Organic Nitrogen and Its Interaction with Microbial Communities in a Prechlorinated Raw Water Distribution System

Dissolved organic nitrogen (DON) represents a unique challenge in prechlorinated raw water distribution systems (PRWDSs) because of its contribution to the formation of harmful nitrogen-disinfection byproducts, influence upon biogeochemical processes, and unclear molecular characteristics. Here, Fourier transform ion cyclotron resonance mass spectrometry in combination with high-throughput sequencing was applied to elucidate the molecular changes of DON and biofilm microbial communities in a PRWDS in Yixing, China. Our study revealed that dynamic characteristics of DON are significantly correlated with the biofilm. The accumulation of refractory lignin-like compounds and C_nH_mO_pN₁ contributes to the higher recalcitrance molecular characteristics of DON in the effluent associated with Alphaproteobacteria, Planctomycetes, and Bacteroidetes. Additionally, with the help of prechlorination, the biofilm may change the DON characteristics and lead to higher oxygenation, higher m/z, and lower saturation during transportation. Despite the promotion of C_nH_mO_pN₁ and C_nH_mO_pN₃ at the early stage, we suggest that appropriate concentration of chlorine can add to the front end of raw water distribution pipes. Prechlorination may control the nitrification process and stabilize the rapid growth of diversity and concentration of low molecular weight DON, especially the refractory C_nH_mO_pN₁ in the effluent, which may help to improve treatment efficiency of drinking water treatment plants.

Temporal and spatial variations in the bacterial community composition in Lake Bosten, a large, brackish lake in China

The bacteria inhabiting brackish lake environments in arid or semi-arid regions have not been thoroughly identified. In this study, the 454 pyrosequencing method was used to study the sedimentary bacterial community composition (BCC) and diversity in Lake Bosten, which is located in the arid regions of northwestern China. A total of 210,233 high-quality sequence reads and 8,427 operational taxonomic units (OTUs) were successfully obtained from 20 selected sediment samples. The samples were quantitatively dominated by members of Proteobacteria (34.1% ± 11.0%), Firmicutes (21.8% ± 21.9%) and Chloroflexi (13.8% ± 5.2%), which accounted for more than 69% of the bacterial sequences. The results showed that (i) Lake Bosten had significant spatial heterogeneity, and TOC(total organic carbon), TN(total nitrogen) and TP(total phosphorus) were the most important contributors to bacterial diversity; (ii) there was lower taxonomic richness in Lake Bosten, which is located in an arid region, than in reference lakes in eutrophic floodplains and marine systems; and (iii) there was a low percentage of dominant species in the BCC and a high percentage of unidentified bacteria. Our data help to better describe the diversity and distribution of bacterial communities in contaminated brackish lakes in arid regions and how microbes respond to environmental changes in these stable inland waters in arid or semi-arid regions.

Field Research on Mixing Aeration in a Drinking Water Reservoir: Performance and Microbial Community Structure

Field research on the performance of pollutant removal and the structure of the microbial community was carried out on a drinking water reservoir. After one month of operation of a water-lifting aeration system, the water temperature difference between the bottom and the surface decreased from 9.9 to 3.1 °C, and the concentration of the dissolved oxygen (DO) in the bottom layer increased from 0 to 4.2 mg/L. The existing stratification in the reservoir was successfully eliminated. Total nitrogen (TN), total phosphorus (TP), and total organic carbon (TOC) concentrations were reduced by 47.8%, 66.7%, and 22.9%, respectively. High-throughput sequencing showed that Proteobacteria, Bacteroides, and Actinomycetes accounted for 67.52% to 78.74% of the total bacterial population. Differences in the bacterial changes were observed between the enhanced area and the control area. With the operation of the water-lifting aeration system, the populations of bacteria of the main genera varied temporally and spatially. Principal component analysis pointed out a clear evolution in the vertical distribution of the microbial structure controlled by the operation of the aeration system. Permutational analysis of variance showed a significant difference in the microbial community (p < 0.01). Redundancy analysis showed that physical (water temperature, DO) and chemical environmental factors (Chl-a, TOC, TN) were the key factors affecting the changes in the microbial communities in the reservoir water. In addition, a hierarchical partitioning analysis indicated that T, Chl-a, ORP, TOC, pH, and DO accounted for 24.1%, 8.7%, 6.7%, 6.2%, 5.8%, and 5.1% of such changes, respectively. These results are consistent with the ABT (aggregated boosted tree) analysis for the variations in the functional bacterial community, and provide a theoretical basis for the development and application of biotechnology.

Abundance and diversity of nitrogen-removing microorganisms in the UASB-anammox reactor

Anaerobic ammonium oxidation is considered to be the most economical and low-energy biological nitrogen removal process. So far, anammox bacteria have not yet been purified from cultures. Some nitrogen-removing microorganisms cooperate to perform the anammox process. The objective of this research was to analyze the abundance and diversity of nitrogen-removing microorganisms in an anammox reactor started up with bulking sludge at room temperature. In this study, the ammonia-oxidizing archaea phylum Crenarchaeota was enriched from 9.2 to 53.0%. Nitrosomonas, Nitrosococcus, and Nitrosospira, which are ammonia-oxidizing bacteria, increased from 3.2, 1.7, and 0.1% to 12.8, 20.4, and 3.3%, respectively. Ca. Brocadia, Ca. Kuenenia, and Ca. Scalindua, which are anammox bacteria, were detected in the seeding sludge, accounting for 77.1, 11.5, and 10.6%. After cultivation, the dominant genus changed to Ca. Kuenenia, accounting for 82.0%. Nitrospirae, nitrite oxidation bacteria, decreased from 2.2 to 0.1%, while denitrifying genera decreased from 12.9 to 2.1%. The results of this study contribute to the understanding of nitrogen-removing microorganisms in an anammox reactor, thereby facilitating the improvement of such reactors. However, the physiological and metabolic functions of the ammonia-oxidizing archaea community in the anammox reactor need to be investigated in further studies.

Enhancement of nitrogen removal by supplementing fluidized-carriers into the aerobic tank in a full-scale A2/O system

Fluidized-carriers were supplemented into the aerobic tank of a full-scale wastewater treatment plant (WWTP) using an anaerobic/anoxic/aerobic (A²/O) system to improve the nitrogen removal efficiency in effluents. The effects of carrier supplementation on denitrification ability and the bacterial community structures were investigated over 10 months. The results showed that the average effluent concentration of total nitrogen (TN) was maintained at 9.46 ± 1.14 mg/L, which was lower than 15.17 ± 2.00 mg/L in the effluent without carrier supplementation, indicating that adding fluidized-carriers into the aerobic tank contributed to nitrogen removal efficiency. A thick biofilm was formed after 4 months, which provided a good anoxic-aerobic microenvironment to the microbes. Illumina sequencing analysis showed a higher bacterial diversity in the biofilm. The relative abundance of nitrifying bacteria, denitrifying bacteria, and aerobic denitrifying bacteria in the biofilms was 13.68-39%, 11.56-12.17%, and 9.76-12.50%, respectively, which was beneficial for nitrogen removal in the system. The most prevalent genera were Nitrospira, Bacillus, Thauera, Hyphomicrobium, Acinetobacter, Zoogloea, Pseudomonas, and Paracoccus, which can metabolize nitrogenous or aromatic compounds and were the major functional bacterial genera, suggesting that these organisms play key roles in biodegradation processes in the carrier-added A²/O wastewater treatment system.

The influence of chlorination timing and concentration on microbial communities in labyrinth channels: implications for biofilm removal

Chlorination is an effective method to control biofilm formation in enclosed pipelines. To date, very little is known about how to control biofilms at the mesoscale in complex pipelines through chlorination. In this study, the dynamic of microbial communities was examined under different residual chlorine concentrations on the biofilms attached to labyrinth channels for drip irrigation using reclaimed water. The results indicated that the microbial phospholipid fatty acids, extracellular polymeric substances, microbial dynamics, and the ace and Shannon microbial diversity indices showed a gradual decrease after chlorination. However, chlorination increased microbial activity by 0.5-19.2%. The increase in the relative abundances of chloride-resistant bacteria (Acinetobacter and Thermomonas) could lead to a potential risk of chlorine resistance. Thus, keeping a low chlorine concentration (0.83 mg l^-1 for 3 h) is effective for controlling biofilm formation in the labyrinth channels.

Identification of Bacterial Composition in Freeze-Dried Agaricus bisporus During Storage and the Resultant Odor Deterioration

Moisture absorption and bacterial growth are critical factors for quality deterioration of freeze-dried Agaricus bisporus. In order to explore the bacterial composition and the resultant odor changes in freeze-dried A. bisporus during storage under three typical conditions (RT: 25°C, 55% RH; HT: 37°C, 85% RH; AT: ambient temperature), bacterial diversity and communities were analyzed using metagenomics. Moreover, volatile compounds were determined using SPME-GC-MS. The results demonstrated that the bacterial composition in freeze-dried A. bisporus was dominated by Pseudomonas, followed by Rhizobium and Pedobacter. In addition, Mucilaginibacter, Flavobacterium, and Thermus were a few other genera more dominant in HT samples, Chryseobacterium was the other genera more dominant in AT samples, while, Sphingobacterium and Chryseobacterium were a few other genera more dominant in RT samples. Furthermore, the increase of benzaldehyde content in HT samples may have been induced by the growth of Pseudomonads and the esters production in RT and AT samples might have been induced by Chryseobacterium. This study provided comprehensive information on exogenous bacterial composition and the resultant odor in freeze-dried A. bisporus. These results may be a theoretical basis for quality control and quick quality detection based on volatiles of freeze-dried A. bisporus.

Abundance and molecular diversity of thraustochytrids in coastal waters of southern China

Thraustochytrids are unicellular fungi-like (heterotrophic) marine protists that have long been considered to play an important role in the biogeochemical cycles of the coastal oceans. However, the significance of their ecological functions and their diversity in marine ecosystems remain largely unknown. In this report, we examined the spatial and temporal variations of planktonic thraustochytrids, their relationship with other environmental factors, and their diversity in the subtropical coastal waters of China. The abundance of planktonic thraustochytrids ranged from 2.56 × 105 to 17.57 × 105 cells L-1 with highest abundance detected in polluted coastal water in the Spring (March) season. The thraustochytrid biomass was greater than the bacterial biomass in most seawater samples, ranging from 32.29 to 359.51% that of bacterioplankton. The abundance of thraustochytrids appeared to be largely related to that of bacterioplankton and to chemical oxygen demand in water columns. High-throughput sequencing analyses revealed a total of 105 OTUs (97% similarity), which were members of genera Thraustochytrium, Aplanochytrium, Oblongichytrium, Ulkenia, Labyrinthula and undescribed novel phylotypes. Results of this study indicated unprecedented high diversity of labyrinthulomycetes as well as the presence of novel labyrinthulomycete and thraustochytrid lineages, and also provided new information on the significant role of thraustochytrids in microbial food webs in a coastal marine ecosystem.

Simultaneous nitrification-denitrification and membrane fouling alleviation in a submerged biofilm membrane bioreactor with coupling of sponge and biodegradable PBS carrier

Simultaneous nitrification-denitrification (SND) was achieved in submerged biofilm membrane bioreactor (SBF-MBR) treating low carbon/nitrogen (C/N) ratio wastewater. A novel bio-carrier coupling of sponge and biodegradable poly(butanediol succinate) (PBS) was applied as external carbon source and biofilm carrier. Result represented that NH₄⁺-N and total nitrogen removal efficiencies were high of 99.1% and 94.3% in the SBF-MBR. Protein (PN) contents from SND-biofilm were reduced by 10.5% and 44.3% in TB-EPS and LB-EPS, while polysaccharides (PS) were reduced by 45.8% and 34.8%, respectively. 3D-EEM spectra indicated that protein-like, humic acid-like and fulvic acid-like substances were the main components in EPS and their peak intensities were reduced. Additionally, membrane fouling of SBF-MBR was improved after the achievement of biofilm. Microbial community analysis showed that Simplicispira, Thauera, Desulfovibrio, Dechlorobacter and Acinetobacter were dominant genus, which indicated co-existence of nitrifying bacteria, heterotrophic denitrifiers and aerobic denitrifiers in the SBF-MBR.

Seasonal and spatial variation in the sediment bacterial community and diversity of Lake Bosten, China

To explore the influence of seasonal and regional environmental factors on the bacterial community composition (BCC) and diversity in the sediments of Lake Bosten, the 16S rRNA gene of sediment bacteria in four samples from the lake center area and the macrophyte-dominated area were sequenced using 454 pyrosequencing. According to the operational taxonomic units (OTUs), diversity index, relative abundance, and redundancy analysis (RDA) of the bacteria, the results showed that (i) the bacterial diversity of the lake center area was lower than that of the macrophyte-dominated area, and it was higher in winter than that in summer as a whole; (ii) seasonal factors and geographical changes had obvious effects on the abundance of dominant bacteria, including Proteobacteria and Firmicutes; (iii) a large number of unclassified bacteria were detected in this study, and the dominant unclassified genera in both lake areas included unclassified Sva0485, unclassified Anaerolineaceae, and unclassified Nitrospiraceae; and (iv) TN and TOC were the main environmental factors influencing the sediment bacterial community in Lake Bosten, as determined by RDA analysis. The study provides a reference for the in-depth understanding the impact with the change of time and space on sediment microbes in Lake Bosten.

Effects of pipe material on nitrogen transformation, microbial communities and functional genes in raw water transportation

Raw water transportation pipelines are vital in an urban water supply system for transporting raw water to drinking water treatment plants. This study investigated the effects of pipe material on nitrogen transformation, microbial communities and characteristics of related function genes in paint-lined steel pipe (PLSP) and cement-lined steel pipe (CLSP) raw water model systems. We established quantitative relationships between specific functional genes and change rates of nitrogen pollutants, which were verified by field investigation on nitrogen pollutant transformations in real raw water transportation systems. The results showed that the CLSP produced higher ammonia nitrogen (NH₄⁺-N) transformation rates and higher effluent concentrations of nitrate nitrogen (NO₃^--N) and dissolved organic nitrogen (DON) than the PLSP. Both pipes achieved high and stable nitrite nitrogen (NO₂^--N) and low total nitrogen (TN) removal efficiency. Nitrification was found to be the dominant process in both model systems, especially in the CLSP. Characteristics of microbial communities and nitrogen functional genes, which were analysed by high-throughput pyrosequencing and quantitative polymerase chain reaction (qPCR), respectively, varied between the two pipe systems. Nitrogen transformation pathways, identified by path analysis, were also different between the PLSP and CLSP due to different microbial community characteristics and synergistic effects of nitrogen functional genes. In the CLSP, (NH₄⁺-N→NO₂^--N) with part denitrification, was the primary transformation pathway of ammonia nitrogen (NH₄⁺-N), while only ammonia oxidization contributed to NH₄⁺-N transformation in the PLSP. (NO₂^--N→NO₃^--N) was the main pathway involved in NO₂^--N transformation and NO₃^--N accumulation. The TN removal showed complex relationships with nitrification, denitrification and nitrogen fixation processes. These findings provided molecular-level insights into nitrogen pollutant transformations during the transportation of raw water through different types of pipes and technical support for the selection of raw water pipe materials. In our study area, the Taihu basin, China, PLSP was better than CLSP for distributing raw water in a short transportation distance, due to the lower effluent concentrations of DON and NO₃^--N and less abundance of microorganisms.

Metagenomic insights into the effect of oxytetracycline on microbial structures, functions and functional genes in sediment denitrification

Denitrification is an indispensable pathway of nitrogen removal in aquatic ecosystems, and plays an important role in decreasing eutrophication induced by excessive reactive nitrogen pollution. Aquatic environments also suffer from antibiotic pollution due to runoff from farms and sewage systems. The aim of this study was to investigate the effect of oxytetracycline stress on denitrifying functional genes, the microbial community and metabolic pathways in sediments using high-throughput sequencing and metagenomic analysis. The oxytetracycline was observed to significantly inhibit the abundance of nirK and nosZ genes (P < 0.001). KEGG pathway annotation indicated that oxytetracycline treatment decreased the abundance of nitrate reductase, nitrite reductase and N₂O reductase. Functional annotations revealed that oxytetracycline exposure decreased the abundance of the protein metabolism subsystem in the bacterial community. Metagenomic sequencing demonstrated that the abundance of Proteobacteria and Firmicutes increased with oxytetracycline exposure while the Actinobacteria decreased. In sediments, Pseudomonas and Bradyrhizobium were major contributors to denitrification and oxytetracycline exposure resulted in a decreased abundance of Bradyrhizobium. These results indicated that oxytetracycline residues influences the denitrifier community and may heighten occurrence of reactive nitrogen in aquatic ecosystems.

Simultaneous nitrification, denitrification and phosphorus removal in aerobic granular sequencing batch reactors with high aeration intensity: Impact of aeration time

A new operating approach by reducing the aeration time while keeping high intensity was evaluated for enhanced nutrients removal and maintenance of granular stability. Three aerobic granular sequencing batch reactors (SBR) performing simultaneous nitrification, denitrification and phosphorus removal (SNDPR) were run at different aeration time (120, 90, and 60 min). Aerobic granules could remain their integrity and stability over long-term operation under high aeration intensity and different time, and shorter aeration time favored the retention of biomass, better settleability, and more production of extracellular polymeric substances (EPS). Besides, efficient and stable reactor performance for carbon and phosphorus were achieved, especially, enhanced nitrogen removal was obtained due to reduction of aeration time. Further exploration revealed that the aeration time shaped the bacterial community in terms of diversity, composition, as well as the distribution of functional groups involving carbon, nitrogen and phosphorus removal.

In Situ Water Quality Improvement Mechanism (Nitrogen Removal) by Water-Lifting Aerators in a Drinking Water Reservoir

A field scale experiment was performed to explore the nitrogen removal performance of the water and surface sediment in a deep canyon-shaped drinking water reservoir by operating WLAs (water-lifting aerators). Nitrogen removal performance was achieved by increasing the densities and N-removal genes (nirK and nirS) of indigenous aerobic denitrifiers. After the operation of WLAs, the total nitrogen removal rate reached 29.1 ± 0.8% in the enhanced area. Ammonia and nitrate concentrations were reduced by 72.5 ± 2.5% and 40.5 ± 2.1%, respectively. No nitrite accumulation was observed. Biolog results showed improvement of carbon metabolism and carbon source utilization of microbes in the enhanced area. Miseq high-throughput sequencing indicated that the denitrifying bacteria percentage was also higher in the enhanced area than that in the control area. Microbial communities had changed between the enhanced and control areas. Thus, nitrogen removal through enhanced indigenous aerobic denitrifiers by the operation of WLAs was feasible and successful at the field scale.

Characterization of Microbial Communities in Pilot-Scale Constructed Wetlands with Salicornia for Treatment of Marine Aquaculture Effluents

Microorganisms play an essential role in the performance of constructed wetlands (CWs) for wastewater treatment. However, there has been limited discussion on the characteristics of microbial communities in CWs for treatment of effluents from marine recirculating aquaculture systems (RAS). This study is aimed at characterizing the microbial communities of pilot-scale CWs with Salicornia bigelovii for treatment of saline wastewater from a land-based Atlantic salmon RAS plant located in Northern China. Illumina high-throughput sequencing was employed to identify the profile of microbial communities of three CWs receiving wastewater under different total ammonia nitrogen (TAN) concentrations. Results of this study showed remarkable spatial variations in diversity and composition of microbial communities between roots and substrates in three CWs, with distinct response to different TAN concentrations. In particular, Proteobacteria, Firmicutes, Cyanobacteria, and Bacteroidetes were predominant in roots, while Cyanobacteria, Proteobacteria, Firmicutes, Verrucomicrobia, and Bacteroidetes were prevalent in substrates. Moreover, redundancy analysis indicated that specific functional genera, such as Nitrosopumilus, Vibrio, Pseudoalteromonas, Nitrospina, and Planctomyces, played key roles in the removal of nitrogen/phosphorus pollutants and growth of wetland plants. From a microorganism perspective, the findings of this study could contribute to better understanding of contaminants' removal mechanism and improved management of CWs for treatment of effluents from land-based marine aquaculture.

Improving nutrient removal performance of surface flow constructed wetlands in winter using hardy submerged plant-benthic fauna systems

A novel hardy submerged plant-benthic fauna systems to enhance the performance of surface flow constructed wetlands in winter.

Phosphorus and Cu2+ removal by periphytic biofilm stimulated by upconversion phosphors doped with Pr3+-Li. BIORESOURCE TECHNOLOGY 2018;248:68-74. [PMID: 28734589 DOI: 10.1016/j.biortech.2017.07.027]

Upconversion phosphors (UCPs) can convert visible light into luminescence, such as UV, which can regulate the growth of microbes. Based on these fundamentals, the community composition of periphytic biofilms stimulated by UCPs doped with Pr³⁺-Li⁺ was proposed to augment the removal of phosphorus (P) and copper (Cu). Results showed that the biofilms with community composition optimized by UCPs doped with Pr³⁺-Li⁺ had high P and Cu²⁺ removal rates. This was partly due to overall bacterial and algal abundance and biomass increases. The synergistic actions of algal, bacterial biomass and carbon metabolic capacity in the Pr-Li stimulated biofilms facilitated the removal of P and Cu²⁺. The results show that the stimulation of periphytic biofilms by lanthanide-doped UCPs is a promising approach for augmenting P and Cu²⁺ removal.

Microbial communities in the native habitats of Agaricus sinodeliciosus from Xinjiang Province revealed by amplicon sequencing

Agaricus sinodeliciosus is an edible species described from China and has been successfully cultivated. However, no studies have yet reported the influence factors implicated in the process of fructification. To better know abiotic and biotic factors, physiochemical characteristics and microbial communities were investigated in five different soil samples collected in the native habitats of specimens from northern Xinjiang, southern Xinjiang, and Zhejiang Province, respectively. There are major differences in texture and morphology among different specimens of A. sinodeliciosus from Xinjiang Province. A. sinodeliciosus from southern Xinjiang was the largest. Concentrations of DOC and TN and C/N ratio are not the main reason for the differences. Microbial communities were analyzed to find out mushroom growth promoting microbes (MGPM), which may lead to the differences. Functional microbes were picked out and can be divided into two categories. Microbes in the first category may belong to MGPM. There may be symbiotic relationships between microbes in the second category and A. sinodeliciosus. Certain analyses of microbial communities support the hypothesis that interactions between microbes and mushrooms would be implicated in morphological variation of the collected mushrooms. Redundancy analysis results indicate that high DOC/NH₄⁺-N ratio and NH₄⁺-N concentration can improve the yield of A. sinodeliciosus.

The performance and evolution of bacterial community of activated sludge exposed to trimethoprim in a sequencing batch reactor

The performance and microbial community changes of an activated sludge sequencing batch reactor were evaluated after exposure to trimethoprim for 51days. The average chemical oxygen demand, ammonia nitrogen, phosphorus efficiencies were 88.6%±0.56%, 90.47%±0.29% and 64.25%±1.12%, respectively. The protein and polysaccharide contents increased with increasing trimethoprim concentration to protect the cells from the unfavorable conditions. The chemical composition of extracellular polymeric substances increased. For denitrifying bacteria, the read numbers of Pseudomonas, Flavobacterium and Bacillus were both significantly increased from Day 1 to 25 and sharply decreased by Day 50 (p<0.05), which is consistent with the tendency of Planctomyces (Anammox). The read number of Paracoccus displayed an increasing trend, whereas Nitrospirales, Nitrospira (nitrite oxidizer) and Nitrosomonadaceae (ammonia oxidizer) were significantly decreased (p<0.05). The read number of Rhodocyclaceae (phosphorus oxidizer) was significantly decreased from Day 1 to 25 and sharply increased by Day 50 (p<0.05).

Variation of microbial communities and functional genes during the biofilm formation in raw water distribution systems and associated effects on the transformation of nitrogen pollutants

This study aimed to investigate the variation of microbial communities and functional genes during the biofilm formation in raw water distribution systems without prechlorination and associated effects on the transformation of nitrogen pollutants by using a designed model pipe system. The results showed the transformation of nitrogen pollutants was obvious during the biofilm formation. The richness and diversity of the microbial communities changed significantly. The higher abundance of Nitrospirae in biofilm samples significantly contributed to biological nitrification. In particular, the stable content of Bacteroidetes in the biofilm and soluble microbial products released by the biomass might have enhanced the increase in dissolved organic nitrogen. In addition, the variation tendency of nitrogen functional gene abundances and their strong effects on NH₄⁺-N, NO₂^--N, and NO₃^--N transformation were clearly observed. These findings provide new insights into the evolution of microbial communities and functional genes during the initial operation period of real-world raw water distribution pipes and highlight management and possible safety issues in the subsequent water treatment process.