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Show S, Akhter R, Paul I, Das P, Bal M, Bhattacharya R, Bose D, Mondal A, Saha S, Halder G. Efficacy of exopolysaccharide in dye-laden wastewater treatment: A comprehensive review. CHEMOSPHERE 2024; 355:141753. [PMID: 38531498 DOI: 10.1016/j.chemosphere.2024.141753] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Revised: 03/12/2024] [Accepted: 03/16/2024] [Indexed: 03/28/2024]
Abstract
The discharge of dye-laden wastewater into the water streams causes severe water and soil pollution, which poses a global threat to aquatic ecosystems and humans. A diverse array of microorganisms such as bacteria, fungi, and algae produce exopolysaccharides (EPS) of different compositions and exhibit great bioflocculation potency to sustainably eradicate dyes from water bodies. Nanomodified chemical composites of EPS enable their recyclability during dye-laden wastewater treatment. Nevertheless, the selection of potent EPS-producing strains and physiological parameters of microbial growth and the remediation process could influence the removal efficiency of EPS. This review will intrinsically discuss the fundamental importance of EPS from diverse microbial origins and their nanomodified chemical composites, the mechanisms in EPS-mediated bioremediation of dyes, and the parametric influences on EPS-mediated dye removal through sorption/bioflocculation. This review will pave the way for designing and adopting futuristic green and sustainable EPS-based bioremediation strategies for dye-laden wastewater in situ and ex situ.
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Affiliation(s)
- Sumona Show
- Department of Chemical Engineering, National Institute of Technology Durgapur, Durgapur, 713209, West Bengal, India
| | - Ramisa Akhter
- Department of Biotechnology, National Institute of Technology Durgapur, Durgapur, 713209, West Bengal, India
| | - Indrani Paul
- Department of Biotechnology, Brainware University, Barasat, Kolkata, 700125, West Bengal, India
| | - Payal Das
- Department of Chemical Engineering, National Institute of Technology Durgapur, Durgapur, 713209, West Bengal, India
| | - Manisha Bal
- Department of Chemical Engineering, National Institute of Technology Durgapur, Durgapur, 713209, West Bengal, India
| | - Riya Bhattacharya
- School of Biotechnology, Shoolini University of Biotechnology and Management Sciences, Solan, 173229, Himachal Pradesh, India
| | - Debajyoti Bose
- School of Biotechnology, Shoolini University of Biotechnology and Management Sciences, Solan, 173229, Himachal Pradesh, India
| | - Amita Mondal
- Department of Chemistry, Vedanta College, Kolkata, 700054, West Bengal, India
| | - Shouvik Saha
- Department of Biotechnology, Brainware University, Barasat, Kolkata, 700125, West Bengal, India.
| | - Gopinath Halder
- Department of Chemical Engineering, National Institute of Technology Durgapur, Durgapur, 713209, West Bengal, India.
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Liu Z, Hao N, Hou Y, Wang Q, Liu Q, Yan S, Chen F, Zhao L. Technologies for harvesting the microalgae for industrial applications: Current trends and perspectives. BIORESOURCE TECHNOLOGY 2023; 387:129631. [PMID: 37544545 DOI: 10.1016/j.biortech.2023.129631] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 08/02/2023] [Accepted: 08/03/2023] [Indexed: 08/08/2023]
Abstract
Microalgae are emerging as a promising source for augmenting the supply of essential products to meet global demands in an environmentally sustainable manner. Despite the potential benefits of microalgae in industry, the high energy consumption for harvesting remains a significant obstacle. This review offers a comprehensive overview of microalgae harvesting technologies and their industrial applications, with particular emphasis on the latest advances in flocculation techniques. These cutting-edge methods have been applied to biodiesel production, food and nutraceutical processing, and wastewater treatment. Large-scale harvesting is still severely impeded by the high cost despite progress has been made in laboratory studies. In the future, cost-effective microalgal harvesting will rely on efficient resource utilization, including the use of waste materials and the reuse of media and flocculants. Additionally, precise regulation of biological metabolism will be necessary to overcome algal species-related limitations through the development of extracellular polymeric substance-induced flocculation technology.
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Affiliation(s)
- Zhiyong Liu
- Key Laboratory of Engineering Biology for Low-carbon Manufacturing, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China; National Center of Technology Innovation for Synthetic Biology, Tianjin, China
| | - Nahui Hao
- Key Laboratory of Engineering Biology for Low-carbon Manufacturing, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China; National Center of Technology Innovation for Synthetic Biology, Tianjin, China; College of Biotechnology, Tianjin University of Science and Technology, Tianjin, China
| | - Yuyong Hou
- Key Laboratory of Engineering Biology for Low-carbon Manufacturing, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China; National Center of Technology Innovation for Synthetic Biology, Tianjin, China
| | - Qing Wang
- Key Laboratory of Engineering Biology for Low-carbon Manufacturing, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China; National Center of Technology Innovation for Synthetic Biology, Tianjin, China
| | - Qingling Liu
- Key Laboratory of Engineering Biology for Low-carbon Manufacturing, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China; National Center of Technology Innovation for Synthetic Biology, Tianjin, China; College of Biotechnology, Tianjin University of Science and Technology, Tianjin, China
| | - Suihao Yan
- Key Laboratory of Engineering Biology for Low-carbon Manufacturing, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China; National Center of Technology Innovation for Synthetic Biology, Tianjin, China; College of Biotechnology, Tianjin University of Science and Technology, Tianjin, China
| | - Fangjian Chen
- Key Laboratory of Engineering Biology for Low-carbon Manufacturing, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China; National Center of Technology Innovation for Synthetic Biology, Tianjin, China
| | - Lei Zhao
- Key Laboratory of Engineering Biology for Low-carbon Manufacturing, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China; National Center of Technology Innovation for Synthetic Biology, Tianjin, China.
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Feng L, Qian T, Yang G, Mu J. Characteristics of exopolysaccharides produced by isolates from natural bioflocculant of Ruditapes philippinarum conglutination mud. Front Microbiol 2023; 13:1068922. [PMID: 36713164 PMCID: PMC9874098 DOI: 10.3389/fmicb.2022.1068922] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Accepted: 12/19/2022] [Indexed: 01/12/2023] Open
Abstract
Three novel types of exopolysaccharides (EPS) EPS-S8, EPS-S5, and EPS-F10 were extracted and purified from bacterial isolates Bacillus sp. GHS8, Pseudoalteromonas sp. GHS5 and Psychrobacter sp. GHF10, which were originated from natural bioflocculant of Ruditapes philippinarum conglutination mud (RPM), respectively. The EPS had similar function groups C-H, N-H, C-O, and C = O. The EPS were composed of different monosaccharides (EPS-F10, Man: GlcN: GlcUA: GalUA = 1:0.66:5.75:0.51; EPS-S5, Man: Gal: GlcN: Rib = 1: 0.50: 2.94: 0.26; EPS-S8, Man: Gal: GlcN = 1:1.54:7.69). The molecular weights (Mw) of EPS were ordered as 51.4 kDa (EPS-S5) > 9.15 kDa (EPS-S8) > 4.41 kDa (EPS-F10). Three types of EPS all showed higher peak flocculation activities than the reported crude EPS from the RPM. Besides, the EPS also exhibited efficient decoloration and antioxidation activities, especially for EPS-S8, which might be due to the low Mw and specific monosaccharide composition.
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Affiliation(s)
- Lijuan Feng
- Zhejiang Provincial Key Laboratory of Petrochemical Pollution Control, Zhejiang Ocean University, Zhoushan, Zhejiang, China
| | - Tingting Qian
- Zhejiang Provincial Key Laboratory of Petrochemical Pollution Control, Zhejiang Ocean University, Zhoushan, Zhejiang, China
| | - Guangfeng Yang
- Zhejiang Provincial Key Laboratory of Petrochemical Pollution Control, Zhejiang Ocean University, Zhoushan, Zhejiang, China
| | - Jun Mu
- School of Ecology and Environment, Hainan Tropical Ocean University, Sanya, Hainan, China,*Correspondence: Jun Mu, ✉
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Enhanced Removal of Malachite Green Using Calcium-Functionalized Magnetic Biochar. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:ijerph19063247. [PMID: 35328937 PMCID: PMC8954663 DOI: 10.3390/ijerph19063247] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Revised: 03/02/2022] [Accepted: 03/07/2022] [Indexed: 12/31/2022]
Abstract
To efficiently remove malachite green (MG), a novel calcium-functionalized magnetic biochar (Ca/MBC) was fabricated via a two-step pyrolysis method. Iron-containing oxides endowed the target complexes with magnetic properties, especially the chemotactic binding ability with MG, and the addition of calcium significantly changed the morphology of the material and improved its adsorption performance, especially the chemotactic binding ability with MG, which could be confirmed through FTIR, XPS, and adsorption experiments. Electrostatic adsorption, ligand exchange, and hydrogen bonding acted as essential drivers for an enhanced adsorption process, and the maximum theoretical adsorption capacity was up to 12,187.57 mg/g. Ca/MBC maintained a higher adsorption capacity at pH = 4–12, and after five adsorption–desorption cycles, the adsorption capacity and adsorption rate of MG remained at 1424.2 mg/g and 71.21%, highlighting the advantages of Ca/MBC on adsorbing MG. This study suggests that biochar can be modified by a green synthesis approach to produce calcium-functionalized magnetic biochar with excellent MG removal capacity. The synthetic material can not only remove pollutants from water but also provide an efficient way for soil remediation.
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Xia M, Zhou H, Amanze C, Hu L, Shen L, Yu R, Liu Y, Chen M, Li J, Wu X, Qiu G, Zeng W. A novel polysaccharides-based bioflocculant produced by Bacillus subtilis ZHX3 and its application in the treatment of multiple pollutants. CHEMOSPHERE 2022; 289:133185. [PMID: 34883128 DOI: 10.1016/j.chemosphere.2021.133185] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 11/05/2021] [Accepted: 12/04/2021] [Indexed: 06/13/2023]
Abstract
A high bioflocculant-producing bacterial strain was identified and named Bacillus subtilis ZHX3. Single-factor experiments suggested that 10 g/L starch and 5 g/L yeast extract were optimal for strain ZHX3 to produce bioflocculant MBF-ZHX3. The maximum flocculating rate reached 95.5%, and 3.14 g/L product was extracted after 3 days of cultivation. MBF-ZHX3 was mainly composed of polysaccharides (77.2%) and protein (14.8%). The polysaccharides contained 28.9% uronic acid and 3.7% amino sugar. Rhamnose, arabinose, galactose, glucose, mannose, and galacturonic acid in a molar ratio of 0.35:1.83:3.09:12.66:0.46:3.81 were detected. MBF-ZHX3 had a molecular weight of 10,028 Da and contained abundant groups (-OH, CO, >PO, C-O-C) contributing to flocculation. Adsorption and bridging was considered as the main flocculation mechanism. MBF-ZHX3 was more effective in decolorizing dyes, removing heavy metals and flotation reagents compared to polyacrylamide. The results implied that MBF-ZHX3 has the potential to substitute polyacrylamide in wastewater treatment because of its excellent biological and environmental benefits.
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Affiliation(s)
- Mingchen Xia
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China
| | - Han Zhou
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China
| | - Charles Amanze
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China
| | - Lan Hu
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China
| | - Li Shen
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy, Ministry of Education, Changsha, 410083, China
| | - Runlan Yu
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy, Ministry of Education, Changsha, 410083, China
| | - Yuandong Liu
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy, Ministry of Education, Changsha, 410083, China
| | - Miao Chen
- CSIRO Process Science and Engineering, Clayton, Victoria, 3168, Australia; Centre for Advanced Materials and Industrial Chemistry, RMIT University, Melbourne, 3000, Australia
| | - Jiaokun Li
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy, Ministry of Education, Changsha, 410083, China
| | - Xueling Wu
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy, Ministry of Education, Changsha, 410083, China
| | - Guanzhou Qiu
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy, Ministry of Education, Changsha, 410083, China
| | - Weimin Zeng
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy, Ministry of Education, Changsha, 410083, China; CSIRO Process Science and Engineering, Clayton, Victoria, 3168, Australia.
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Mu J, Wang Y, Cui X, Yang Q. Ubiquitous flocculation activity and flocculation production basis of the conglutination mud from Ruditapes philippinarum along the coast of China. PLoS One 2021; 16:e0256013. [PMID: 34793464 PMCID: PMC8601509 DOI: 10.1371/journal.pone.0256013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2020] [Accepted: 07/28/2021] [Indexed: 11/18/2022] Open
Abstract
Ruditapes philippinarum conglutination mud (RPM) is a typical waste by-product from manila clam R. philippinarum aquaculture. However, RPM from the clam at an aquaculture farm in Zhoushan, China, has been newly reported as a promising natural bioflocculant resource that contains effective flocculating polysaccharides from the clam associated bacteria. With an intent to figure out whether RPM flocculation activity is ubiquitous to the manila clam across a wide geographical range or only the Zhoushan location, and to explore the flocculation production basis and ultimately widen its exploitation scope, in this study, an extensive survey of RPMs from four representative locations along the coast of China was performed to determine their flocculation activity, polysaccharide constitution and bacterial community composition. Frozen preserved RPM samples from Zhoushan, Dalian, Weihai and Zhanjiang exhibited comparable flocculation activities (FRs) ranging from 61.9±2.4% to 73.2±0.9% at dosage of 8 g·L-1; while fresh RPMs from Zhoushan exhibited a much higher flocculation activity of 91.34±1.18% than its frozen counterpart. Polysaccharide extracts from the four locations showed similar monosaccharide constitutions to some extent. The geographical distribution led to certain variation in bacterial community structures. The similarity clustering of the polysaccharide compositions coincided with that of bacterial community structures from RPMs, suggesting that polysaccharides and respective bacterial communities might be the foundation of the flocculation activity for all RPMs. The overlapping OTUs across all the RPMs accounted for 44.6-62.22% of the overall sequences in each sample and contained the vast majority of the most abundant OTUs (Operational Taxonomic Units), forming a common "core microbiome" that is probably responsible for polysaccharide production and flocculation activity development.
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Affiliation(s)
- Jun Mu
- School of Ecology & Environment, Hainan Tropical Ocean University, Sanya, Hainan, China
- * E-mail:
| | - Yuxia Wang
- School of Marine Science & Technology, Zhejiang Ocean University, Zhoushan, Zhejiang, China
| | - Xia Cui
- School of Marine Science & Technology, Zhejiang Ocean University, Zhoushan, Zhejiang, China
| | - Qiao Yang
- School of Marine Science & Technology, Zhejiang Ocean University, Zhoushan, Zhejiang, China
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Liu C, Sun D, Liu J, Zhu J, Liu W. Recent advances and perspectives in efforts to reduce the production and application cost of microbial flocculants. BIORESOUR BIOPROCESS 2021; 8:51. [PMID: 38650196 PMCID: PMC10992557 DOI: 10.1186/s40643-021-00405-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2021] [Accepted: 06/08/2021] [Indexed: 01/09/2023] Open
Abstract
Microbial flocculants are macromolecular substances produced by microorganisms. Due to its non-toxic, harmless, and biodegradable advantages, microbial flocculants have been widely used in various industrial fields, such as wastewater treatment, microalgae harvest, activated sludge dewatering, heavy metal ion adsorption, and nanoparticle synthesis, especially in the post-treatment process of fermentation with high safety requirement. However, compared with the traditional inorganic flocculants and organic polymeric flocculants, the high production cost is the main bottleneck that restricts the large-scale production and application of microbial flocculants. To reduce the production cost of microbial flocculant, a series of efforts have been carried out and some exciting research progresses have been achieved. This paper summarized the research advances in the last decade, including the screening of high-yield strains and the construction of genetically engineered strains, search of cheap alternative medium, the extraction and preservation methods, microbial flocculants production as an incidental product of other biological processes, combined use of traditional flocculant and microbial flocculant, and the production of microbial flocculant promoted by inducer. Moreover, this paper prospects the future research directions to further reduce the production cost of microbial flocculants, thereby promoting the industrial production and large-scale application of microbial flocculants.
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Affiliation(s)
- Cong Liu
- Jiangsu Key Laboratory of Phylogenomics & Comparative Genomics, School of Life Science, Jiangsu Normal University, No.101, Shanghai road, Tongshan New District, Xuzhou, 221116, Jiangsu, China
| | - Di Sun
- Jiangsu Key Laboratory of Phylogenomics & Comparative Genomics, School of Life Science, Jiangsu Normal University, No.101, Shanghai road, Tongshan New District, Xuzhou, 221116, Jiangsu, China
| | - Jiawen Liu
- Jiangsu Key Laboratory of Phylogenomics & Comparative Genomics, School of Life Science, Jiangsu Normal University, No.101, Shanghai road, Tongshan New District, Xuzhou, 221116, Jiangsu, China
| | - Jingrong Zhu
- Jiangsu Key Laboratory of Phylogenomics & Comparative Genomics, School of Life Science, Jiangsu Normal University, No.101, Shanghai road, Tongshan New District, Xuzhou, 221116, Jiangsu, China
| | - Weijie Liu
- Jiangsu Key Laboratory of Phylogenomics & Comparative Genomics, School of Life Science, Jiangsu Normal University, No.101, Shanghai road, Tongshan New District, Xuzhou, 221116, Jiangsu, China.
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Yang Q, Ge YM, Iqbal NM, Yang X, Zhang XL. Sulfitobacter alexandrii sp. nov., a new microalgae growth-promoting bacterium with exopolysaccharides bioflocculanting potential isolated from marine phycosphere. Antonie van Leeuwenhoek 2021; 114:1091-1106. [PMID: 33895907 DOI: 10.1007/s10482-021-01580-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Accepted: 04/13/2021] [Indexed: 02/04/2023]
Abstract
Marine phycosphere harbors unique cross-kingdom associations with enormous ecological significance in aquatic ecosystems as well as relevance for algal biotechnology industry. During our investigating the microbial composition and bioactivity of marine phycosphere microbiota (PM), a novel lightly yellowish and versatile bacterium designated strain AM1-D1T was isolated from cultivable PM of marine dinoflagellate Alexandrium minutum amtk4 that produces high levels of paralytic shellfish poisoning toxins (PSTs). Strain AM1-D1T demonstrates notable bioflocculanting bioactivity with bacterial exopolysaccharides (EPS), and microalgae growth-promoting (MGP) potential toward its algal host. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain AM1-D1T was affiliated to the members of genus Sulfitobacter within the family Rhodobacteraceae, showing the highest sequence similarity of 97.9% with Sulfitobacter noctilucae NB-68T, and below 97.8% with other type strains. The complete genome of strain AM1-D1T consisted of a circular 3.84-Mb chromosome and five circular plasmids (185, 95, 15, 205 and 348 Kb, respectively) with the G+C content of 64.6%. Low values obtained by phylogenomic calculations on the average nucleotide identity (ANI, 77.2%), average amino acid identity (AAI, 74.7%) and digital DNA-DNA hybridization (dDDH, 18.6%) unequivocally separated strain AM1-D1T from its closest relative. The main polar lipids were identified as phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, diphosphatidylglycerol, one unidentified phospholipid and one unidentified lipid. The predominant fatty acids (> 10%) were C18:1 ω7c, C19:0 cyclo ω8c and C16:0. The respiratory quinone was Q-10. The genome of strain AM1-D1T was predicted to encode series of gene clusters responsible for sulfur oxidation (sox) and utilization of dissolved organic sulfur exometabolites from marine dinoflagellates, taurine (tau) and dimethylsulfoniopropionate (DMSP) (dmd), as well as supplementary vitamin B12 (cob), photosynthesis carotenoids (crt) which are pivotal components during algae-bacteria interactions. Based on the evidences by the polyphasic characterizations, strain AM1-D1T represents a novel species of the genus Sulfitobacter, for which the name Sulfitobacter alexandrii sp. nov. is proposed. The type strain is AM1-D1T (= CCTCC 2017277T = KCTC 62491T).
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Affiliation(s)
- Qiao Yang
- Department of Marine Chemistry, Zhejiang Ocean University, Zhoushan, China.,ABI Group of GPM Project, Zhejiang Ocean University, Zhoushan, China
| | - Ya-Ming Ge
- National Engineering Research Center for Marine Aquaculture, Zhoushan, China
| | - Nurhezreen Md Iqbal
- Malaysia Genome Institute, National Institute of Biotechnology Malaysia, Kajang, Malaysia
| | - Xi Yang
- Institute of Animal Science, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Xiao-Ling Zhang
- Department of Marine Chemistry, Zhejiang Ocean University, Zhoushan, China.
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Sphingopyxis microcysteis sp. nov., a novel bioactive exopolysaccharides-bearing Sphingomonadaceae isolated from the Microcystis phycosphere. Antonie van Leeuwenhoek 2021; 114:845-857. [PMID: 33770293 DOI: 10.1007/s10482-021-01563-1] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2021] [Accepted: 03/15/2021] [Indexed: 10/21/2022]
Abstract
During the study into the microbial biodiversity and bioactivity of the Microcystis phycosphere, a new yellow-pigmented, non-motile, rod-shaped bacterium containing polyhydroxybutyrate granules designated as strain Z10-6T was isolated from highly-toxic Microcystis aeruginosa Kützing M.TN-2. The new isolate produces active bioflocculating exopolysaccharides. Phylogenetic analysis based on 16S rRNA gene sequences indicated strain Z10-6T belongs to the genus Sphingopyxis with highest similarity to Sphingopyxis solisilvae R366T (98.86%), and the similarity to other Sphingopyxis members was less than 98.65%. However, both low values obtained by phylogenomic calculation of average nucleotide identity (ANI, 85.5%) and digital DNA-DNA hybridization (dDDH, 29.8%) separated the new species from its closest relative. The main polar lipids were sphingoglycolipid, phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, one unidentified glycolipid and one unidentified aminophospholipid. The predominant fatty acids were summed feature 8, C17:1ω6c, summed feature 3, C16:0, C18:1ω7c 11-methyl and C14:0 2-OH. The respiratory quinone was ubiqunone-10, with spermidine as the major polyamine. The genomic DNA G + C content was 64.8 mol%. Several biosynthesis pathways encoding for potential new bacterial bioactive metabolites were found in the genome of strain Z10-6T. The polyphasic analyses clearly distinguished strain Z10-6T from its closest phylogenetic neighbors. Thus, it represents a novel species of the genus Sphingopyxis, for which the name Sphingopyxis microcysteis sp. nov. is proposed. The type strain is Z10-6T (= CCTCC AB2017276T = KCTC 62492T).
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Limnobacter alexandrii sp. nov., a thiosulfate-oxidizing, heterotrophic and EPS-bearing Burkholderiaceae isolated from cultivable phycosphere microbiota of toxic Alexandrium catenella LZT09. Antonie van Leeuwenhoek 2020; 113:1689-1698. [PMID: 32955707 DOI: 10.1007/s10482-020-01473-8] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Accepted: 09/11/2020] [Indexed: 10/23/2022]
Abstract
A novel Gram-negative, aerobic, motile and short rod-shaped bacterium with exopolysaccharides production, designated as LZ-4T, was isolated from cultivable phycosphere microbiota of harmful algal blooms-causing marine dinoflagellate Alexandrium catenella LZT09 which produces paralytic shellfish poisoning toxins. Strain LZ-4T was able to use thiosulfate (optimum concentration 10 mM) as energy source for bacterial growth. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain LZ-4T belonged to the genus Limnobacter, showing high 16S rRNA gene sequences similarities with L. thiooxidans DSM 13612T (99.4%), L. humi NBRC 11650T (98.2%) and L. litoralis NBRC 105857T (97.2%), respectively. The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between LZ-4T and L. thiooxidans DSM 13612T were 78.9 and 21.9%, respectively. Both values were far lower than the thresholds (95-96% for ANI and 70% for dDDH) generally accepted for new species delineation. The respiratory quinone of strain LZ-4T was Q-8. The dominant cellular fatty acids were determined as summed feature 3 (C16:1 ω6c/ω7c), summed feature 8 (C18:1 ω6c/ω7c) and C16:0. Polar lipids profile consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, two unidentified aminolipids and three unidentified polar lipids. The genomic DNA G+C content of strain LZ-4T was 52.5 mol%. Based on polyphasic characterization, strain LZ-4T represents a novel species of the genus Limnobacter, for which the name Limnobacter alexandrii sp. nov. is proposed. The type strain is LZ-4T (=CCTCC AB 2019004T =KCTC 72281T).
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Complete Genome Sequence of a Toxic and Bioactive Exopolysaccharide-Bearing Bacterium, Sulfitobacter sp. Strain AM1-D1. Microbiol Resour Announc 2020; 9:9/16/e00232-20. [PMID: 32299880 PMCID: PMC7163018 DOI: 10.1128/mra.00232-20] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Sulfitobacter sp. strain AM1-D1, a toxic bacterium of the family Rhodobacteraceae, was isolated from the cultivable phycosphere microbiota of marine toxigenic dinoflagellate Alexandrium minutum amtk4. The complete 4.69-Mb genome comprises one single circular chromosome and five circular plasmids. It has 4,559 coding genes, including those for biosynthesis or degradation of saxitoxin and bioactive exopolysaccharides. Sulfitobacter sp. strain AM1-D1, a toxic bacterium of the family Rhodobacteraceae, was isolated from the cultivable phycosphere microbiota of marine toxigenic dinoflagellate Alexandrium minutum amtk4. The complete 4.69-Mb genome comprises one single circular chromosome and five circular plasmids. It has 4,559 coding genes, including those for biosynthesis or degradation of saxitoxin and bioactive exopolysaccharides.
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