Use of fluorescence to monitor the incorporation of horseradish peroxidase into a sol–gel derived medium

Covalent immobilizing horseradish peroxidase on electrochemically-functionalized biochar for phenol removal

Enzyme-based biocatalytic treatment has been known as an effective measure to biologically degrade organic pollutants. Advantageously, enzymes could be immobilized on solid supports, and such fact enables reuse/prolong the enzymatic capability. It could be of great importance to functionalize a support material for enhancing the immobilization efficiency/stability of enzymes. As such, this study laid great emphasis on covalent bonding to immobilize horseradish peroxidase (HRP) on a functionalized rice straw biochar with glutaraldehyde (GA) as a crosslinker. Biochar was pretreated by the electrochemical method and the acid treatment respectively to enrich the oxygen-containing functional groups. These led to the enhanced immobilizing ability of biochar. The HRP immobilized on the electrochemically-functionalized biochar (HRP-EBC) showed three times as much enzyme activity as the HRP directly adsorbed onto biochar. The HRP immobilized on the acid-functionalized biochar (HRP-ABC) showed activity similar to that of HRP-EBC. It was concluded that both the (acid/electrochemical) pretreatments are effective to enhance enzyme immobilization. Nevertheless, the electrochemical functionalized method of biochar is chemical oxidant-free, and one important lesson from a series of tests was that the pretreatment of biochar through the electrochemical method could be more environmentally benign. Moreover, employing HRP-EBC could be beneficial from a perspective of a real environmental practice considering its higher pH, thermal stability, and good reusability. 80% of phenol was degraded in 1 h in the presence of HRP-EBC when pH was 7.0 and a ratio of H₂O₂ to phenol was 1:1.5.

Biodegradation of phenol and dyes with horseradish peroxidase covalently immobilized on functionalized RGO-SiO2 nanocomposite

Horseradish peroxidase (HRP) was immobilized onto a functionalized reduced graphene oxide-SiO₂ through the covalent bonding process. By using scanning electron microscopy (SEM) and Fourier transform infrared (FT-IR), the formed nanocomposites were characterized. The kinetic parameters including the catalytic constant, k_cat, and the catalytic efficiency, k_cat/K_m, increased 5.5 and 6 times, respectively, after immobilization. The circular dichroism analysis demonstrated that the α-helical content increased from 39% to 46% after immobilization. The immobilization improved the reusability of HRP as 70% of initial activity retained after 10 cycles. Due to the buffering effect, the immobilized HRP was less sensitive to pH changes as compared to the free HRP. At temperature 40 °C and during 90 min, the immobilized HRP retained 90% of the initial activity while 70% of initial activity remained for the free HRP. After 35-day storage, no reduction in the activity was observed for the immobilized HRP. The removal efficiency for phenol concentration (2500 mg/L) obtained 100% and 50% for the immobilized and free HRP, respectively. The results showed that the immobilized HRP promoted the dyes decolorization from 2-fold until 26-fold as compared to the free HRP. The decolorization efficiencies reached 100% for most dyes in the case of immobilized HRP.

Viability of Saccharomyces cerevisiae incorporated within silica and polysaccharide hosts monitored via time-resolved fluorescence

The viability of Saccharomyces cerevisiae in biocompatible polymers under different growth conditions and studied using time-resolved fluorescence techniques is presented. Two fluorophores, the viscosity sensitive probe 4-(4-(dimethylamino)styryl)-N-methyl-pyridiniumiodine (DASPMI) and the yeast viability stain 2-chloro-4-(2,3-dihydro-3-methyl-(benzo-1,3-thiazol-2-yl)-methylidene)-1-phenylquinolinium iodide (FUN-1) are used to elucidate information on the incorporated yeast cell viability. Variations in cell viscosity, which are indicative of the cell state, were obtained using DASPMI. Prior to observing FUN-1 in yeast cells using fluorescence lifetime imaging, its photophysics in solution and heterogeneous media were investigated. Time-resolved emission spectra were measured and analysed to associate lifetimes to the spectral emission. Preliminary results show that monitoring the fluorescence lifetime of FUN-1 may give a useful insight into cellular metabolism. The results indicate that both fluorophores may be used to monitor the entrapped yeast cell viability, which is important for in vitro studies and applications, such as that in the biofuel industry, where Saccharomyces cerevisiae are required to remain active in high ethanol environments.

Low concentration of silver nanoparticles not only enhances the activity of horseradish peroxidase but alter the structure also

Chemical synthesis of Ag-NPs was carried out using reduction method. The reduction mechanistic approach of silver ions was found to be a basic clue for the formation of the Ag-NPs. The nanoparticles were characterized by UV-vis, FT-IR and TEM analysis. We had designed some experiments in support of our hypothesis, "low concentrations of novel nanoparticles (silver and gold) increases the activity of plant peroxidases and alter their structure also", we had used Ag-NPs and HRP as models. The immobilization/interaction experiment had demonstrated the specific concentration range of the Ag-NPs and within this range, an increase in HRP activity was reported. At 0.08 mM concentration of Ag-NPs, 50% increase in the activity yield was found. The U.V-vis spectra had demonstrated the increase in the absorbance of HRP within the reported concentration range (0.06-0.12 mM). Above and below this concentration range there was a decrease in the activity of HRP. The results that we had found from the fluorescence spectra were also in favor of our hypothesis. There was a maximum increase in ellipticity and α-helix contents in the presence of 0.08 mM concentration of Ag-NPs, demonstrated by circular dichroism (CD) spectra. Finally, incubation of a plant peroxidase, HRP with Ag-NPs, within the reported concentration range not only enhances the activity but also alter the structure.

Probing Local Environments by Time-Resolved Stimulated Emission Spectroscopy

Time-resolved stimulated emission spectroscopy was employed to probe the local environment of DASPMI (4-(4-(dimethylamino)styryl)-N-methyl-pyridinium iodide) in binary solvents of different viscosity and in a sol-gel matrix. DASPMI is one of the molecules of choice to probe local environments, and the dependence of its fluorescence emission decay on viscosity has been previously used for this purpose in biological samples, solid matrices as well as in solution. The results presented in this paper show that time-resolved stimulated emission of DASPMI is a suitable means to probe the viscosity of local environments. Having the advantage of a higher time resolution, stimulated emission can provide information that is complementary to that obtained from fluorescence decay measurements, making it feasible to probe systems with lower viscosity.

Application of Fluorescence Techniques to Characterise the Preparation of Protein-Containing Sol-Gel Derived Hosts for use as Catalytic Media

In this work we collate and review the usage that we have made of fluorescence techniques employed to follow the sol to gel transition and aging in different tetraethylorthosilicate based materials. The sol-gel method allows porous glasslike of good optical quality to be produced at relatively low (ambient) temperatures, which facilitates the incorporation of a range of molecules; from laser dyes to biomolecules. Here the use of “common” viscosity (DASPMI) and polarity (Nile red) sensitive fluorescence probes to monitor the host manufacture is made. Nile red was also used to label two catalytically active proteins (cytochrome c and subtilisin Carlsberg). These were incorporated into the different host media and the dye used to ascertain changes in protein conformation, both upon incorporation and at the end of an aging period. Complementary measurements of catalytic activity were performed. The probe emission was monitored via steady state and time-resolved fluorescence techniques and comparison made with the catalytic activity measurements to elucidate the amount of accessible and active protein. Overall it was found that the hosts became stable after an aging period approaching 20 days and that the major influence on the catalytic reaction rates was that of host mediated mass transport.

Controllable transport mean free path of light in xerogel matrixes embedded with polystyrene spheres

Xerogel matrices, made by sol-gel techniques, are embedded with polystyrene spheres to promote multiple scattering of light. Varying the concentration of the spheres inside the matrix allows one to adjust the transport mean free path of light inside the material. Coherent backscattering measurements show that a range of transport mean free paths from 90 to 600 nm is easily achieved. The determination of the matrix refractive index permits a direct comparison to multiple scattering and Mie theory. Such tunable diffusive sol-gel derived samples can be further optimized as random laser materials.

Optical spectroscopy following the incorporation of a rare-earth containing (Eu) polyoxometalate into a sol-gel derived media

Polyoxometalates (POMs) are an emerging class of materials which can be considered as inorganic complexes with distinct structural and optical characteristics. To be suitable in biomedical applications such as imaging, the materials may need to be embedded in a suitable host material, which may affect the optical properties of the emitting polyoxometalate. Here, we demonstrate that POMs can successfully be included into a sol-gel derived silica matrix. We report on the effects of one such potential host on the luminescence excitation and emission spectra, as well as the POM luminescence decay times. It appears that the POMs do not interact with the bulk oxide of the matrix, but are retained within the hosts' internal pore structure.

Diffusion in a Sol−Gel-Derived Medium with a View toward Biosensor Applications

Time-resolved fluorescence anisotropy and fluorescence recovery after photobleaching were applied to study the diffusion of dyes and a fluorescence-labeled enzyme in a sol-gel-derived medium. This type of medium exhibits attractive properties such as robustness, low processing temperature, high porosity, large internal surface area, and can act as protective immobilization media for biologically active molecules. This makes it a suitable candidate for biosensor applications. The glasslike nature and good optical quality allows for light addressable entities to be incorporated and accessed using spectroscopy. This type of matrix, once formed, can be anything from an ordered gel to a robust glassy block depending on the aging process. In this work we apply confocal microscopy and time-resolved fluorescence techniques to study both rotational and lateral diffusion with aging time within a silica sol-gel derived monolith. An enzyme, horseradish peroxidase, was labeled with Alexa Fluor 488 and rotation related to both the enzyme and the probe monitored during the matrix aging process. Diffusion coefficients of between ca. 0.5 x 10(-7) and 4 x 10(-7) cm2 s(-1) were obtained from preliminary FRAP measurements of fluorescein and correlated to differences in the catalytic activity of HRP incorporated in the monolith.

Molecular diffusion within sol–gel derived matrices viewed via fluorescence recovery after photobleaching

A suitable matrix to host enzymes for biosensor applications should encage and retain the bioactive species, while allowing it to be accessed to exploit its catalytic properties. Sol-gel derived monoliths are promising in this aspect. Molecular diffusion was monitored using fluorescence labelled proteins and unbound fluorescence dye molecules (representative of enzyme substrates) and their interaction with and mobility within the host assessed using time-resolved fluorescence anisotropy and fluorescence recovery after photobleaching observed via confocal microscopy.