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For: Halatek J, Frey E. Highly canalized MinD transfer and MinE sequestration explain the origin of robust MinCDE-protein dynamics. Cell Rep 2012;1:741-52. [PMID: 22813748 DOI: 10.1016/j.celrep.2012.04.005] [Citation(s) in RCA: 86] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2011] [Revised: 01/26/2012] [Accepted: 04/18/2012] [Indexed: 11/15/2022]  Open
Number Cited by Other Article(s)
1
Guo S, Korolija N, Milfeld K, Jhaveri A, Sang M, Ying YM, Johnson ME. Parallelization of Particle-Based Reaction-Diffusion Simulations Using MPI. J Comput Chem 2025;46:e70132. [PMID: 40405327 DOI: 10.1002/jcc.70132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2024] [Revised: 04/22/2025] [Accepted: 05/02/2025] [Indexed: 05/24/2025]
2
Guo S, Korolija N, Milfeld K, Jhaveri A, Sang M, Ying YM, Johnson ME. Parallelization of particle-based reaction-diffusion simulations using MPI. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.12.06.627287. [PMID: 39713431 PMCID: PMC11661114 DOI: 10.1101/2024.12.06.627287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 12/24/2024]
3
Köhler R, Murray SM. Plasmid partitioning driven by collective migration of ParA between nucleoid lobes. Proc Natl Acad Sci U S A 2024;121:e2319205121. [PMID: 38652748 PMCID: PMC11067062 DOI: 10.1073/pnas.2319205121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Accepted: 03/27/2024] [Indexed: 04/25/2024]  Open
4
Rombouts J, Elliott J, Erzberger A. Forceful patterning: theoretical principles of mechanochemical pattern formation. EMBO Rep 2023;24:e57739. [PMID: 37916772 PMCID: PMC10792592 DOI: 10.15252/embr.202357739] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 09/21/2023] [Accepted: 09/27/2023] [Indexed: 11/03/2023]  Open
5
Weyer H, Brauns F, Frey E. Coarsening and wavelength selection far from equilibrium: A unifying framework based on singular perturbation theory. Phys Rev E 2023;108:064202. [PMID: 38243507 DOI: 10.1103/physreve.108.064202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Accepted: 08/29/2023] [Indexed: 01/21/2024]
6
Carlquist WC, Cytrynbaum EN. The mechanism of MinD stability modulation by MinE in Min protein dynamics. PLoS Comput Biol 2023;19:e1011615. [PMID: 37976301 PMCID: PMC10691731 DOI: 10.1371/journal.pcbi.1011615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Revised: 12/01/2023] [Accepted: 10/18/2023] [Indexed: 11/19/2023]  Open
7
Brauns F, Iñigo de la Cruz L, Daalman WKG, de Bruin I, Halatek J, Laan L, Frey E. Redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast. Nat Commun 2023;14:6504. [PMID: 37845215 PMCID: PMC10579396 DOI: 10.1038/s41467-023-42100-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2022] [Accepted: 09/26/2023] [Indexed: 10/18/2023]  Open
8
Chodha SS, Brooks AC, Davis PJ, Ramachandran R, Chattoraj D, Hwang L. Kinetic principles of ParA2-ATP cycling guide dynamic subcellular localizations in Vibrio cholerae. Nucleic Acids Res 2023;51:5603-5620. [PMID: 37140034 PMCID: PMC10287910 DOI: 10.1093/nar/gkad321] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2022] [Revised: 04/07/2023] [Accepted: 04/27/2023] [Indexed: 05/05/2023]  Open
9
Meindlhumer S, Brauns F, Finžgar JR, Kerssemakers J, Dekker C, Frey E. Directing Min protein patterns with advective bulk flow. Nat Commun 2023;14:450. [PMID: 36707506 PMCID: PMC9883515 DOI: 10.1038/s41467-023-35997-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Accepted: 01/10/2023] [Indexed: 01/29/2023]  Open
10
Yanagisawa M, Watanabe C, Yoshinaga N, Fujiwara K. Cell-Size Space Regulates the Behavior of Confined Polymers: From Nano- and Micromaterials Science to Biology. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022;38:11811-11827. [PMID: 36125172 DOI: 10.1021/acs.langmuir.2c01397] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
11
Würthner L, Brauns F, Pawlik G, Halatek J, Kerssemakers J, Dekker C, Frey E. Bridging scales in a multiscale pattern-forming system. Proc Natl Acad Sci U S A 2022;119:e2206888119. [PMID: 35960842 PMCID: PMC9388104 DOI: 10.1073/pnas.2206888119] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Accepted: 07/13/2022] [Indexed: 01/08/2023]  Open
12
Takada S, Yoshinaga N, Doi N, Fujiwara K. Mode selection mechanism in traveling and standing waves revealed by Min wave reconstituted in artificial cells. SCIENCE ADVANCES 2022;8:eabm8460. [PMID: 35675408 PMCID: PMC9177070 DOI: 10.1126/sciadv.abm8460] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
13
Chen X, Xu Y, Zhou C, Lou K, Peng Y, Zhang HP, Wang W. Unraveling the physiochemical nature of colloidal motion waves among silver colloids. SCIENCE ADVANCES 2022;8:eabn9130. [PMID: 35613263 PMCID: PMC9132452 DOI: 10.1126/sciadv.abn9130] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
14
Gomez D, Iyaniwura S, Paquin-Lefebvre F, Ward MJ. Pattern forming systems coupling linear bulk diffusion to dynamically active membranes or cells. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2021;379:20200276. [PMID: 34743601 DOI: 10.1098/rsta.2020.0276] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
15
Kinetic Pattern Formation with Intermolecular Interactions: A Modified Brusselator Model. CHINESE JOURNAL OF POLYMER SCIENCE 2021. [DOI: 10.1007/s10118-021-2600-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
16
Bulk-surface coupling identifies the mechanistic connection between Min-protein patterns in vivo and in vitro. Nat Commun 2021;12:3312. [PMID: 34083526 PMCID: PMC8175580 DOI: 10.1038/s41467-021-23412-5] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2020] [Accepted: 04/21/2021] [Indexed: 11/08/2022]  Open
17
Mishra B, Johnson ME. Speed limits of protein assembly with reversible membrane localization. J Chem Phys 2021;154:194101. [PMID: 34240891 PMCID: PMC8131109 DOI: 10.1063/5.0045867] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Accepted: 04/26/2021] [Indexed: 12/15/2022]  Open
18
Yang X, Chen Y, Zhou T, Zhang J. Exploring dissipative sources of non-Markovian biochemical reaction systems. Phys Rev E 2021;103:052411. [PMID: 34134237 DOI: 10.1103/physreve.103.052411] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Accepted: 04/29/2021] [Indexed: 11/07/2022]
19
Dynamics of the Bacillus subtilis Min System. mBio 2021;12:mBio.00296-21. [PMID: 33849976 PMCID: PMC8092234 DOI: 10.1128/mbio.00296-21] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
20
Johnson ME, Chen A, Faeder JR, Henning P, Moraru II, Meier-Schellersheim M, Murphy RF, Prüstel T, Theriot JA, Uhrmacher AM. Quantifying the roles of space and stochasticity in computer simulations for cell biology and cellular biochemistry. Mol Biol Cell 2021;32:186-210. [PMID: 33237849 PMCID: PMC8120688 DOI: 10.1091/mbc.e20-08-0530] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2020] [Revised: 10/13/2020] [Accepted: 11/17/2020] [Indexed: 12/29/2022]  Open
21
Chaudhary R, Mishra S, Kota S, Misra H. Molecular interactions and their predictive roles in cell pole determination in bacteria. Crit Rev Microbiol 2021;47:141-161. [PMID: 33423591 DOI: 10.1080/1040841x.2020.1857686] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
22
Heermann T, Franquelim HG, Glock P, Harrington L, Schwille P. Probing Biomolecular Interactions by a Pattern-Forming Peptide-Conjugate Sensor. Bioconjug Chem 2020;32:172-181. [PMID: 33314917 PMCID: PMC7872319 DOI: 10.1021/acs.bioconjchem.0c00596] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
23
Krause AL, Klika V, Halatek J, Grant PK, Woolley TE, Dalchau N, Gaffney EA. Turing Patterning in Stratified Domains. Bull Math Biol 2020;82:136. [PMID: 33057872 PMCID: PMC7561598 DOI: 10.1007/s11538-020-00809-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Accepted: 09/18/2020] [Indexed: 01/06/2023]
24
Nguyen B, Seifert U. Exponential volume dependence of entropy-current fluctuations at first-order phase transitions in chemical reaction networks. Phys Rev E 2020;102:022101. [PMID: 32942421 DOI: 10.1103/physreve.102.022101] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2020] [Accepted: 07/07/2020] [Indexed: 12/23/2022]
25
Flow Induced Symmetry Breaking in a Conceptual Polarity Model. Cells 2020;9:cells9061524. [PMID: 32585819 PMCID: PMC7349905 DOI: 10.3390/cells9061524] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Revised: 06/18/2020] [Accepted: 06/19/2020] [Indexed: 12/19/2022]  Open
26
Fritz JH, Nguyen B, Seifert U. Stochastic thermodynamics of chemical reactions coupled to finite reservoirs: A case study for the Brusselator. J Chem Phys 2020;152:235101. [PMID: 32571070 DOI: 10.1063/5.0006115] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
27
Kohyama S, Fujiwara K, Yoshinaga N, Doi N. Conformational equilibrium of MinE regulates the allowable concentration ranges of a protein wave for cell division. NANOSCALE 2020;12:11960-11970. [PMID: 32458918 DOI: 10.1039/d0nr00242a] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
28
Shen JP, Chang YR, Chou CF. Frequency modulation of the Min-protein oscillator by nucleoid-associated factors in Escherichia coli. Biochem Biophys Res Commun 2020;525:857-862. [DOI: 10.1016/j.bbrc.2020.02.161] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Accepted: 02/26/2020] [Indexed: 01/13/2023]
29
Kohyama S, Fujiwara K, Yoshinaga N, Doi N. Self-organization Assay for Min Proteins of Escherichia coli in Micro-droplets Covered with Lipids. Bio Protoc 2020;10:e3561. [PMID: 33659532 PMCID: PMC7842281 DOI: 10.21769/bioprotoc.3561] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2019] [Revised: 02/03/2020] [Accepted: 02/19/2020] [Indexed: 11/09/2022]  Open
30
Heermann T, Ramm B, Glaser S, Schwille P. Local Self-Enhancement of MinD Membrane Binding in Min Protein Pattern Formation. J Mol Biol 2020;432:3191-3204. [PMID: 32199984 DOI: 10.1016/j.jmb.2020.03.012] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2019] [Revised: 03/07/2020] [Accepted: 03/09/2020] [Indexed: 01/06/2023]
31
Paquin-Lefebvre F, Xu B, DiPietro KL, Lindsay AE, Jilkine A. Pattern formation in a coupled membrane-bulk reaction-diffusion model for intracellular polarization and oscillations. J Theor Biol 2020;497:110242. [PMID: 32179107 DOI: 10.1016/j.jtbi.2020.110242] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2019] [Revised: 03/02/2020] [Accepted: 03/05/2020] [Indexed: 01/19/2023]
32
Wigbers MC, Brauns F, Hermann T, Frey E. Pattern localization to a domain edge. Phys Rev E 2020;101:022414. [PMID: 32168714 DOI: 10.1103/physreve.101.022414] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2019] [Accepted: 12/03/2019] [Indexed: 06/10/2023]
33
Geßele R, Halatek J, Würthner L, Frey E. Geometric cues stabilise long-axis polarisation of PAR protein patterns in C. elegans. Nat Commun 2020;11:539. [PMID: 31988277 PMCID: PMC6985163 DOI: 10.1038/s41467-020-14317-w] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2019] [Accepted: 12/16/2019] [Indexed: 12/21/2022]  Open
34
Glock P, Brauns F, Halatek J, Frey E, Schwille P. Design of biochemical pattern forming systems from minimal motifs. eLife 2019;8:48646. [PMID: 31767054 PMCID: PMC6922632 DOI: 10.7554/elife.48646] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2019] [Accepted: 11/06/2019] [Indexed: 01/10/2023]  Open
35
Ramm B, Heermann T, Schwille P. The E. coli MinCDE system in the regulation of protein patterns and gradients. Cell Mol Life Sci 2019;76:4245-4273. [PMID: 31317204 PMCID: PMC6803595 DOI: 10.1007/s00018-019-03218-x] [Citation(s) in RCA: 68] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Revised: 06/27/2019] [Accepted: 07/02/2019] [Indexed: 12/22/2022]
36
Goychuk A, Frey E. Protein Recruitment through Indirect Mechanochemical Interactions. PHYSICAL REVIEW LETTERS 2019;123:178101. [PMID: 31702232 DOI: 10.1103/physrevlett.123.178101] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2019] [Indexed: 06/10/2023]
37
Frank JR, Guven J, Kardar M, Shackleton H. Pinning of diffusional patterns by non-uniform curvature. ACTA ACUST UNITED AC 2019. [DOI: 10.1209/0295-5075/127/48001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
38
Ehrmann A, Nguyen B, Seifert U. Interlinked GTPase cascades provide a motif for both robust switches and oscillators. J R Soc Interface 2019;16:20190198. [PMID: 31387482 DOI: 10.1098/rsif.2019.0198] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]  Open
39
Kohyama S, Yoshinaga N, Yanagisawa M, Fujiwara K, Doi N. Cell-sized confinement controls generation and stability of a protein wave for spatiotemporal regulation in cells. eLife 2019;8:e44591. [PMID: 31358115 PMCID: PMC6667215 DOI: 10.7554/elife.44591] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Accepted: 07/12/2019] [Indexed: 01/10/2023]  Open
40
Halatek J, Brauns F, Frey E. Self-organization principles of intracellular pattern formation. Philos Trans R Soc Lond B Biol Sci 2019;373:rstb.2017.0107. [PMID: 29632261 PMCID: PMC5904295 DOI: 10.1098/rstb.2017.0107] [Citation(s) in RCA: 86] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/09/2018] [Indexed: 11/13/2022]  Open
41
Kretschmer S, Harrington L, Schwille P. Reverse and forward engineering of protein pattern formation. Philos Trans R Soc Lond B Biol Sci 2019;373:rstb.2017.0104. [PMID: 29632258 DOI: 10.1098/rstb.2017.0104] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/30/2017] [Indexed: 12/18/2022]  Open
42
Wettmann L, Kruse K. The Min-protein oscillations in Escherichia coli: an example of self-organized cellular protein waves. Philos Trans R Soc Lond B Biol Sci 2019;373:rstb.2017.0111. [PMID: 29632263 DOI: 10.1098/rstb.2017.0111] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/08/2017] [Indexed: 01/09/2023]  Open
43
Vendel KJA, Tschirpke S, Shamsi F, Dogterom M, Laan L. Minimal in vitro systems shed light on cell polarity. J Cell Sci 2019;132:132/4/jcs217554. [PMID: 30700498 DOI: 10.1242/jcs.217554] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]  Open
44
Glock P, Ramm B, Heermann T, Kretschmer S, Schweizer J, Mücksch J, Alagöz G, Schwille P. Stationary Patterns in a Two-Protein Reaction-Diffusion System. ACS Synth Biol 2019;8:148-157. [PMID: 30571913 DOI: 10.1021/acssynbio.8b00415] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
45
Ye W, Celiksoy S, Jakab A, Khmelinskaia A, Heermann T, Raso A, Wegner SV, Rivas G, Schwille P, Ahijado-Guzmán R, Sönnichsen C. Plasmonic Nanosensors Reveal a Height Dependence of MinDE Protein Oscillations on Membrane Features. J Am Chem Soc 2018;140:17901-17906. [PMID: 30481454 DOI: 10.1021/jacs.8b07759] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
46
The Min Oscillator Defines Sites of Asymmetric Cell Division in Cyanobacteria during Stress Recovery. Cell Syst 2018;7:471-481.e6. [PMID: 30414921 DOI: 10.1016/j.cels.2018.10.006] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Revised: 09/04/2018] [Accepted: 10/15/2018] [Indexed: 11/20/2022]
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Bergeler S, Frey E. Regulation of Pom cluster dynamics in Myxococcus xanthus. PLoS Comput Biol 2018;14:e1006358. [PMID: 30102692 PMCID: PMC6107250 DOI: 10.1371/journal.pcbi.1006358] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2018] [Revised: 08/23/2018] [Accepted: 07/11/2018] [Indexed: 11/18/2022]  Open
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Ramm B, Glock P, Schwille P. In Vitro Reconstitution of Self-Organizing Protein Patterns on Supported Lipid Bilayers. J Vis Exp 2018. [PMID: 30102292 PMCID: PMC6126581 DOI: 10.3791/58139] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
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Gnesotto FS, Mura F, Gladrow J, Broedersz CP. Broken detailed balance and non-equilibrium dynamics in living systems: a review. REPORTS ON PROGRESS IN PHYSICS. PHYSICAL SOCIETY (GREAT BRITAIN) 2018;81:066601. [PMID: 29504517 DOI: 10.1088/1361-6633/aab3ed] [Citation(s) in RCA: 133] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
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Earnest TM, Cole JA, Luthey-Schulten Z. Simulating biological processes: stochastic physics from whole cells to colonies. REPORTS ON PROGRESS IN PHYSICS. PHYSICAL SOCIETY (GREAT BRITAIN) 2018;81:052601. [PMID: 29424367 DOI: 10.1088/1361-6633/aaae2c] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
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