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Safdar MF, Nowak RM, Pałka P. Pre-Processing techniques and artificial intelligence algorithms for electrocardiogram (ECG) signals analysis: A comprehensive review. Comput Biol Med 2024; 170:107908. [PMID: 38217973 DOI: 10.1016/j.compbiomed.2023.107908] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Revised: 12/19/2023] [Accepted: 12/24/2023] [Indexed: 01/15/2024]
Abstract
Electrocardiogram (ECG) are the physiological signals and a standard test to measure the heart's electrical activity that depicts the movement of cardiac muscles. A review study has been conducted on ECG signals analysis with the help of artificial intelligence (AI) methods over the last ten years i.e., 2012-22. Primarily, the method of ECG analysis by software systems was divided into classical signal processing (e.g. spectrograms or filters), machine learning (ML) and deep learning (DL), including recursive models, transformers and hybrid. Secondly, the data sources and benchmark datasets were depicted. Authors grouped resources by ECG acquisition methods into hospital-based portable machines and wearable devices. Authors also included new trends like advanced pre-processing, data augmentation, simulations and agent-based modeling. The study found improvement in ECG examination perfection made each year through ML, DL, hybrid models, and transformers. Convolutional neural networks and hybrid models were more targeted and proved efficient. The transformer model extended the accuracy from 90% to 98%. The Physio-Net library helps acquire ECG signals, including the popular benchmark databases such as MIT-BIH, PTB, and challenging datasets. Similarly, wearable devices have been established as a appropriate option for monitoring patient health without the time and place limitations and are also helpful for AI model calibration with so far accuracy of 82%-83% on Samsung smartwatch. In the pre-processing signals, spectrogram generation through Fourier and wavelet transformations are erected leading approaches promoting on average accuracy of 90%-95%. Likewise, data enhancement using geometrical techniques is well-considered; however, extraction and concatenation-based methods need attention. As the what-if analysis in healthcare or cardiac issues can be performed using a complex simulation, the study reviews agent-based modeling and simulation approaches for cardiovascular risk event assessment.
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Affiliation(s)
- Muhammad Farhan Safdar
- Institute of Computer Science, Faculty of Electronics and Information Technology, Warsaw University of Technology, 00-665 Warsaw, Poland.
| | - Robert Marek Nowak
- Institute of Computer Science, Faculty of Electronics and Information Technology, Warsaw University of Technology, 00-665 Warsaw, Poland
| | - Piotr Pałka
- Institute of Control and Computation Engineering, Faculty of Electronics and Information Technology, Warsaw University of Technology, 00-665 Warsaw, Poland
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2
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García-Vicente C, Gutiérrez-Tobal GC, Jiménez-García J, Martín-Montero A, Gozal D, Hornero R. ECG-based convolutional neural network in pediatric obstructive sleep apnea diagnosis. Comput Biol Med 2023; 167:107628. [PMID: 37918264 DOI: 10.1016/j.compbiomed.2023.107628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 09/28/2023] [Accepted: 10/23/2023] [Indexed: 11/04/2023]
Abstract
Obstructive sleep apnea (OSA) is a prevalent respiratory condition in children and is characterized by partial or complete obstruction of the upper airway during sleep. The respiratory events in OSA induce transient alterations of the cardiovascular system that ultimately can lead to increased cardiovascular risk in affected children. Therefore, a timely and accurate diagnosis is of utmost importance. However, polysomnography (PSG), the standard diagnostic test for pediatric OSA, is complex, uncomfortable, costly, and relatively inaccessible, particularly in low-resource environments, thereby resulting in substantial underdiagnosis. Here, we propose a novel deep-learning approach to simplify the diagnosis of pediatric OSA using raw electrocardiogram tracing (ECG). Specifically, a new convolutional neural network (CNN)-based regression model was implemented to automatically predict pediatric OSA by estimating its severity based on the apnea-hypopnea index (AHI) and deriving 4 OSA severity categories. For this purpose, overnight ECGs from 1,610 PSG recordings obtained from the Childhood Adenotonsillectomy Trial (CHAT) database were used. The database was randomly divided into approximately 60%, 20%, and 20% for training, validation, and testing, respectively. The diagnostic performance of the proposed CNN model largely outperformed the most accurate previous algorithms that relied on ECG-derived features (4-class Cohen's kappa coefficient of 0.373 versus 0.166). Specifically, for AHI cutoff values of 1, 5, and 10 events/hour, the binary classification achieved sensitivities of 84.19%, 76.67%, and 53.66%; specificities of 46.15%, 91.39%, and 98.06%; and accuracies of 75.92%, 86.96%, and 91.97%, respectively. Therefore, pediatric OSA can be readily identified by our proposed CNN model, which provides a simpler, faster, and more accessible diagnostic test that can be implemented in clinical practice.
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Affiliation(s)
| | - Gonzalo C Gutiérrez-Tobal
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - Jorge Jiménez-García
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - Adrián Martín-Montero
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - David Gozal
- Office of The Dean, Joan C. Edwards School of Medicine, Marshall University, 1600 Medical Center Dr, Huntington, WV, 25701, USA
| | - Roberto Hornero
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
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Espinosa MA, Ponce P, Molina A, Borja V, Torres MG, Rojas M. Advancements in Home-Based Devices for Detecting Obstructive Sleep Apnea: A Comprehensive Study. SENSORS (BASEL, SWITZERLAND) 2023; 23:9512. [PMID: 38067885 PMCID: PMC10708697 DOI: 10.3390/s23239512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Revised: 11/24/2023] [Accepted: 11/25/2023] [Indexed: 12/18/2023]
Abstract
Obstructive Sleep Apnea (OSA) is a respiratory disorder characterized by frequent breathing pauses during sleep. The apnea-hypopnea index is a measure used to assess the severity of sleep apnea and the hourly rate of respiratory events. Despite numerous commercial devices available for apnea diagnosis and early detection, accessibility remains challenging for the general population, leading to lengthy wait times in sleep clinics. Consequently, research on monitoring and predicting OSA has surged. This comprehensive paper reviews devices, emphasizing distinctions among representative apnea devices and technologies for home detection of OSA. The collected articles are analyzed to present a clear discussion. Each article is evaluated according to diagnostic elements, the implemented automation level, and the derived level of evidence and quality rating. The findings indicate that the critical variables for monitoring sleep behavior include oxygen saturation (oximetry), body position, respiratory effort, and respiratory flow. Also, the prevalent trend is the development of level IV devices, measuring one or two signals and supported by prediction software. Noteworthy methods showcasing optimal results involve neural networks, deep learning, and regression modeling, achieving an accuracy of approximately 99%.
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Affiliation(s)
- Miguel A. Espinosa
- Institute of Advanced Materials for Sustainable Manufacturing, Tecnologico de Monterrey, Mexico City 14380, Mexico; (M.A.E.); (M.R.)
| | - Pedro Ponce
- Institute of Advanced Materials for Sustainable Manufacturing, Tecnologico de Monterrey, Mexico City 14380, Mexico; (M.A.E.); (M.R.)
| | - Arturo Molina
- Institute of Advanced Materials for Sustainable Manufacturing, Tecnologico de Monterrey, Mexico City 14380, Mexico; (M.A.E.); (M.R.)
| | - Vicente Borja
- Faculty of Engineering, Universidad Nacional Autonoma de Mexico, Mexico City 04510, Mexico;
| | - Martha G. Torres
- Sleep Medicine Unit, Instituto Nacional de Enfermedades Respiratorias Ismael Cosio Villegas, Mexico City 14080, Mexico;
| | - Mario Rojas
- Institute of Advanced Materials for Sustainable Manufacturing, Tecnologico de Monterrey, Mexico City 14380, Mexico; (M.A.E.); (M.R.)
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Xia F, Li H, Li Y, Liu X, Xu Y, Fang C, Hou Q, Lin S, Zhang Z, Yang J, Sawan M. Minimally Invasive Hypoglossal Nerve Stimulator Enabled by ECG Sensor and WPT to Manage Obstructive Sleep Apnea. SENSORS (BASEL, SWITZERLAND) 2023; 23:8882. [PMID: 37960581 PMCID: PMC10648123 DOI: 10.3390/s23218882] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2023] [Revised: 10/27/2023] [Accepted: 10/27/2023] [Indexed: 11/15/2023]
Abstract
A hypoglossal nerve stimulator (HGNS) is an invasive device that is used to treat obstructive sleep apnea (OSA) through electrical stimulation. The conventional implantable HGNS device consists of a stimuli generator, a breathing sensor, and electrodes connected to the hypoglossal nerve via leads. However, this implant is bulky and causes significant trauma. In this paper, we propose a minimally invasive HGNS based on an electrocardiogram (ECG) sensor and wireless power transfer (WPT), consisting of a wearable breathing monitor and an implantable stimulator. The breathing external monitor utilizes an ECG sensor to identify abnormal breathing patterns associated with OSA with 88.68% accuracy, achieved through the utilization of a convolutional neural network (CNN) algorithm. With a skin thickness of 5 mm and a receiving coil diameter of 9 mm, the power conversion efficiency was measured as 31.8%. The implantable device, on the other hand, is composed of a front-end CMOS power management module (PMM), a binary-phase-shift-keying (BPSK)-based data demodulator, and a bipolar biphasic current stimuli generator. The PMM, with a silicon area of 0.06 mm2 (excluding PADs), demonstrated a power conversion efficiency of 77.5% when operating at a receiving frequency of 2 MHz. Furthermore, it offers three-voltage options (1.2 V, 1.8 V, and 3.1 V). Within the data receiver component, a low-power BPSK demodulator was ingeniously incorporated, consuming only 42 μW when supplied with a voltage of 0.7 V. The performance was achieved through the implementation of the self-biased phase-locked-loop (PLL) technique. The stimuli generator delivers biphasic constant currents, providing a 5 bit programmable range spanning from 0 to 2.4 mA. The functionality of the proposed ECG- and WPT-based HGNS was validated, representing a highly promising solution for the effective management of OSA, all while minimizing the trauma and space requirements.
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Affiliation(s)
- Fen Xia
- Zhejiang University, Hangzhou 310024, China;
- CenBRAIN Laboratory, School of Engineering, Westlake University, Hangzhou 310024, China; (H.L.)
| | - Hanrui Li
- CenBRAIN Laboratory, School of Engineering, Westlake University, Hangzhou 310024, China; (H.L.)
- SAMA Labs, Computer, Electrical and Mathematical Science and Engineering (CEMSE) Division, Department of Electrical and Computer Engineering, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia
| | - Yixi Li
- State Key Laboratory of Superlattices, Microstructures Institute of Semiconductors, Chinese Academy of Sciences, Beijing 100045, China;
| | - Xing Liu
- CenBRAIN Laboratory, School of Engineering, Westlake University, Hangzhou 310024, China; (H.L.)
| | - Yankun Xu
- CenBRAIN Laboratory, School of Engineering, Westlake University, Hangzhou 310024, China; (H.L.)
| | - Chaoming Fang
- CenBRAIN Laboratory, School of Engineering, Westlake University, Hangzhou 310024, China; (H.L.)
| | - Qiming Hou
- CenBRAIN Laboratory, School of Engineering, Westlake University, Hangzhou 310024, China; (H.L.)
| | - Siyu Lin
- CenBRAIN Laboratory, School of Engineering, Westlake University, Hangzhou 310024, China; (H.L.)
| | - Zhao Zhang
- SAMA Labs, Computer, Electrical and Mathematical Science and Engineering (CEMSE) Division, Department of Electrical and Computer Engineering, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia
| | - Jie Yang
- CenBRAIN Laboratory, School of Engineering, Westlake University, Hangzhou 310024, China; (H.L.)
| | - Mohamad Sawan
- CenBRAIN Laboratory, School of Engineering, Westlake University, Hangzhou 310024, China; (H.L.)
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Arslan RS. Sleep disorder and apnea events detection framework with high performance using two-tier learning model design. PeerJ Comput Sci 2023; 9:e1554. [PMID: 37810361 PMCID: PMC10557519 DOI: 10.7717/peerj-cs.1554] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 08/04/2023] [Indexed: 10/10/2023]
Abstract
Sleep apnea is defined as a breathing disorder that affects sleep. Early detection of sleep apnea helps doctors to take intervention for patients to prevent sleep apnea. Manually making this determination is a time-consuming and subjectivity problem. Therefore, many different methods based on polysomnography (PSG) have been proposed and applied to detect this disorder. In this study, a unique two-layer method is proposed, in which there are four different deep learning models in the deep neural network (DNN), gated recurrent unit (GRU), recurrent neural network (RNN), RNN-based-long term short term memory (LSTM) architecture in the first layer, and a machine learning-based meta-learner (decision-layer) in the second layer. The strategy of making a preliminary decision in the first layer and verifying/correcting the results in the second layer is adopted. In the training of this architecture, a vector consisting of 23 features consisting of snore, oxygen saturation, arousal and sleep score data is used together with PSG data. A dataset consisting of 50 patients, both children and adults, is prepared. A number of pre-processing and under-sampling applications have been made to eliminate the problem of unbalanced classes. Proposed method has an accuracy of 95.74% and 99.4% in accuracy of apnea detection (apnea, hypopnea and normal) and apnea types detection (central, mixed and obstructive), respectively. Experimental results demonstrate that patient-independent consistent results can be produced with high accuracy. This robust model can be considered as a system that will help in the decisions of sleep clinics where it is expected to detect sleep disorders in detail with high performance.
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Abstract
Automatic polysomnography analysis can be leveraged to shorten scoring times, reduce associated costs, and ultimately improve the overall diagnosis of sleep disorders. Multiple and diverse strategies have been attempted for implementation of this technology at scale in the routine workflow of sleep centers. The field, however, is complex and presents unsolved challenges in a number of areas. Recent developments in computer science and artificial intelligence are nevertheless closing the gap. Technological advances are also opening new pathways for expanding our current understanding of the domain and its analysis.
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Affiliation(s)
- Diego Alvarez-Estevez
- Center for Information and Communications Technology Research (CITIC), Universidade da Coruña, 15071 A Coruña, Spain.
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Tyagi PK, Agarwal D. Systematic review of automated sleep apnea detection based on physiological signal data using deep learning algorithm: a meta-analysis approach. Biomed Eng Lett 2023; 13:293-312. [PMID: 37519869 PMCID: PMC10382448 DOI: 10.1007/s13534-023-00297-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2023] [Revised: 06/10/2023] [Accepted: 06/18/2023] [Indexed: 08/01/2023] Open
Abstract
Sleep apnea (SLA) is a respiratory-related sleep disorder that affects a major proportion of the population. The gold standard in sleep testing, polysomnography, is costly, inconvenient, and unpleasant, and it requires a skilled professional to score. Multiple researchers have suggested and developed automated scoring processes with less detectors and automated classification algorithms to resolve these problems. An automatic detection system will allow for a high diagnosis rate and the analysis of additional patients. Deep learning (DL) is achieving high priority due to the availability of databases and recently developed methods. As the most up-and-coming technique for classification and generative tasks, DL has shown its significant potential in 2-dimensional clinical image processing studies. However, physiological information collected as 1-dimensional data has yet to be effectively extracted from this new approach to achieve the needed medical goals. So, in this study, we review the most recent studies in the field of DL applied to physiological data based on pulse oxygen saturation, electrocardiogram, airflow, and sound signal. A total of 47 articles from different journals and publishing houses that were published between 2012 and 2022 were identified. The primary objective of this work is to perform a comprehensive analysis to analyze, classify, and compare the main characteristics of deep-learning algorithms applied in physiological data processing for SLA detection. Overall, our analysis provides comprehensive and detailed information for researchers looking to add to this field. The data input source, objective, DL network, training framework, and database references are the critical factors of the DL approach examined. These are the most critical variables that influence system performance. We categorized the relevant research studies in physiological sensor data analysis using the DL approach based on (1) Physiological sensor data aspects, like signal types, sampling frequency, and window size; and (2) DL model perspectives, such as learning structure and input data types. Supplementary Information The online version contains supplementary material available at 10.1007/s13534-023-00297-5.
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Affiliation(s)
- Praveen Kumar Tyagi
- Department of ECE, Maulana Azad National Institute of Technology, Bhopal, 462003 India
| | - Dheeraj Agarwal
- Department of ECE, Maulana Azad National Institute of Technology, Bhopal, 462003 India
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Xiong P, Yang L, Zhang J, Xu J, Yang J, Wang H, Liu X. Detection of inferior myocardial infarction based on multi branch hybrid network. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104725] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/14/2023]
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Bazoukis G, Bollepalli SC, Chung CT, Li X, Tse G, Bartley BL, Batool-Anwar S, Quan SF, Armoundas AA. Application of artificial intelligence in the diagnosis of sleep apnea. J Clin Sleep Med 2023; 19:1337-1363. [PMID: 36856067 PMCID: PMC10315608 DOI: 10.5664/jcsm.10532] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2022] [Revised: 02/21/2023] [Accepted: 02/21/2023] [Indexed: 03/02/2023]
Abstract
STUDY OBJECTIVES Machine learning (ML) models have been employed in the setting of sleep disorders. This review aims to summarize the existing data about the role of ML techniques in the diagnosis, classification, and treatment of sleep-related breathing disorders. METHODS A systematic search in Medline, EMBASE, and Cochrane databases through January 2022 was performed. RESULTS Our search strategy revealed 132 studies that were included in the systematic review. Existing data show that ML models have been successfully used for diagnostic purposes. Specifically, ML models showed good performance in diagnosing sleep apnea using easily obtained features from the electrocardiogram, pulse oximetry, and sound signals. Similarly, ML showed good performance for the classification of sleep apnea into obstructive and central categories, as well as predicting apnea severity. Existing data show promising results for the ML-based guided treatment of sleep apnea. Specifically, the prediction of outcomes following surgical treatment and optimization of continuous positive airway pressure therapy can be guided by ML models. CONCLUSIONS The adoption and implementation of ML in the field of sleep-related breathing disorders is promising. Advancements in wearable sensor technology and ML models can help clinicians predict, diagnose, and classify sleep apnea more accurately and efficiently. CITATION Bazoukis G, Bollepalli SC, Chung CT, et al. Application of artificial intelligence in the diagnosis of sleep apnea. J Clin Sleep Med. 2023;19(7):1337-1363.
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Affiliation(s)
- George Bazoukis
- Department of Cardiology, Larnaca General Hospital, Larnaca, Cyprus
- Department of Basic and Clinical Sciences, University of Nicosia Medical School, Nicosia, Cyprus
| | | | - Cheuk To Chung
- Cardiac Electrophysiology Unit, Cardiovascular Analytics Group, China-UK Collaboration, Hong Kong
| | - Xinmu Li
- Tianjin Key Laboratory of Ionic-Molecular Function of Cardiovascular disease, Department of Cardiology, Tianjin Institute of Cardiology, the Second Hospital of Tianjin Medical University, Tianjin, China
| | - Gary Tse
- Cardiac Electrophysiology Unit, Cardiovascular Analytics Group, China-UK Collaboration, Hong Kong
- Kent and Medway Medical School, Canterbury, Kent, United Kingdom
| | - Bethany L. Bartley
- Division of Sleep and Circadian Disorders, Brigham and Women’s Hospital, Boston, Massachusetts
| | - Salma Batool-Anwar
- Division of Sleep and Circadian Disorders, Brigham and Women’s Hospital, Boston, Massachusetts
| | - Stuart F. Quan
- Division of Sleep and Circadian Disorders, Brigham and Women’s Hospital, Boston, Massachusetts
- Asthma and Airway Disease Research Center, University of Arizona College of Medicine, Tucson, Arizona
| | - Antonis A. Armoundas
- Cardiovascular Research Center, Massachusetts General Hospital, Boston, Massachusetts
- Broad Institute, Massachusetts Institute of Technology, Cambridge, Massachusetts
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Yue H, Li P, Li Y, Lin Y, Huang B, Sun L, Ma W, Fan X, Wen W, Lei W. Validity study of a multiscaled fusion network using single-lead electrocardiogram signals for obstructive sleep apnea diagnosis. J Clin Sleep Med 2023; 19:1017-1025. [PMID: 36734174 PMCID: PMC10235715 DOI: 10.5664/jcsm.10466] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2022] [Revised: 01/12/2023] [Accepted: 01/12/2023] [Indexed: 02/04/2023]
Abstract
STUDY OBJECTIVES We evaluated the validity of a squeeze-and-excitation and multiscaled fusion network (SE-MSCNN) using single-lead electrocardiogram (ECG) signals for obstructive sleep apnea detection and classification. METHODS Overnight polysomnographic data from 436 participants at the Sleep Center of the First Affiliated Hospital of Sun Yat-sen University were used to generate a new FAH-ECG dataset comprising 260, 88, and 88 single-lead ECG signal recordings for training, validation, and testing, respectively. The SE-MSCNN was employed for detection of apnea-hypopnea events from the acquired ECG segments. Sensitivity, specificity, accuracy, and F1 scores were assigned to assess algorithm performance. We also used the SE-MSCNN to estimate the apnea-hypopnea index, classify obstructive sleep apnea severity, and compare the agreement between 2 sleep technicians. RESULTS The SE-MSCNN's accuracy, sensitivity, specificity, and F1 score on the FAH-ECG dataset were 86.6%, 83.3%, 89.1%, and 0.843, respectively. Although slightly inferior to previously reported results using public datasets, it is superior to state-of-the-art open-source models. Furthermore, the SE-MSCNN had good agreement with manual scoring, such that the Spearman's correlations for the apnea-hypopnea index between the SE-MSCNN and 2 technicians were 0.93 and 0.94, respectively. Cohen's kappa scores in classifying the SE-MSCNN and the 2 sleep technicians were 0.72 and 0.78, respectively. CONCLUSIONS In this study, we validated the use of the SE-MSCNN in a clinical environment, and despite some limitations the network appeared to meet the performance standards for generalizability. Therefore, updating algorithms based on single-lead ECG signals can facilitate the development of novel wearable devices for efficient obstructive sleep apnea screening. CITATION Yue H, Li P, Li Y, et al. Validity study of a multiscaled fusion network using single-lead electrocardiogram signals for obstructive sleep apnea diagnosis. J Clin Sleep Med. 2023;19(6):1017-1025.
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Affiliation(s)
- Huijun Yue
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, People’s Republic of China
| | - Pan Li
- School of Computer Science, South China Normal University, Guangzhou, People’s Republic of China
| | - Yun Li
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, People’s Republic of China
| | - Yu Lin
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, People’s Republic of China
| | - Bixue Huang
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, People’s Republic of China
| | - Lin Sun
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, People’s Republic of China
| | - Wenjun Ma
- School of Computer Science, South China Normal University, Guangzhou, People’s Republic of China
| | - Xiaomao Fan
- College of Big Data and Internet, Shenzhen Technology University, Shenzhen, People’s Republic of China
| | - Weiping Wen
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, People’s Republic of China
| | - Wenbin Lei
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, People’s Republic of China
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Hemrajani P, Dhaka VS, Rani G, Shukla P, Bavirisetti DP. Efficient Deep Learning Based Hybrid Model to Detect Obstructive Sleep Apnea. SENSORS (BASEL, SWITZERLAND) 2023; 23:4692. [PMID: 37430605 DOI: 10.3390/s23104692] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Revised: 04/23/2023] [Accepted: 04/25/2023] [Indexed: 07/12/2023]
Abstract
An increasing number of patients and a lack of awareness about obstructive sleep apnea is a point of concern for the healthcare industry. Polysomnography is recommended by health experts to detect obstructive sleep apnea. The patient is paired up with devices that track patterns and activities during their sleep. Polysomnography, being a complex and expensive process, cannot be adopted by the majority of patients. Therefore, an alternative is required. The researchers devised various machine learning algorithms using single lead signals such as electrocardiogram, oxygen saturation, etc., for the detection of obstructive sleep apnea. These methods have low accuracy, less reliability, and high computation time. Thus, the authors introduced two different paradigms for the detection of obstructive sleep apnea. The first is MobileNet V1, and the other is the convergence of MobileNet V1 with two separate recurrent neural networks, Long-Short Term Memory and Gated Recurrent Unit. They evaluate the efficacy of their proposed method using authentic medical cases from the PhysioNet Apnea-Electrocardiogram database. The model MobileNet V1 achieves an accuracy of 89.5%, a convergence of MobileNet V1 with LSTM achieves an accuracy of 90%, and a convergence of MobileNet V1 with GRU achieves an accuracy of 90.29%. The obtained results prove the supremacy of the proposed approach in comparison to the state-of-the-art methods. To showcase the implementation of devised methods in a real-life scenario, the authors design a wearable device that monitors ECG signals and classifies them into apnea and normal. The device employs a security mechanism to transmit the ECG signals securely over the cloud with the consent of patients.
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Affiliation(s)
- Prashant Hemrajani
- Computer and Communication Engineering, Manipal University Jaipur, Jaipur 303007, Rajasthan, India
| | - Vijaypal Singh Dhaka
- Computer and Communication Engineering, Manipal University Jaipur, Jaipur 303007, Rajasthan, India
| | - Geeta Rani
- Computer and Communication Engineering, Manipal University Jaipur, Jaipur 303007, Rajasthan, India
| | - Praveen Shukla
- Computer and Communication Engineering, Manipal University Jaipur, Jaipur 303007, Rajasthan, India
| | - Durga Prasad Bavirisetti
- Department of Computer Science, Norwegian University of Science and Technology, 7034 Trondheim, Norway
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Ye P, Qin H, Zhan X, Wang Z, Liu C, Song B, Kong Y, Jia X, Qi Y, Ji J, Chang L, Ni X, Tai J. Diagnosis of obstructive sleep apnea in children based on the XGBoost algorithm using nocturnal heart rate and blood oxygen feature. Am J Otolaryngol 2023; 44:103714. [PMID: 36738700 DOI: 10.1016/j.amjoto.2022.103714] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 11/28/2022] [Indexed: 12/02/2022]
Abstract
PURPOSE Obstructive sleep apnea (OSA) is a serious type of obstructive sleep-disordered breathing (SDB) that can cause a series of adverse effects on children's cardiovascular, growth, cognition, etc. The gold standard for diagnosis is polysomnography (PGS), which is used to assess the prevalence of OSA by obtaining the apnea-hypopnea index (AHI), but this diagnosis method is expensive and needs to be performed in a specialized laboratory, making it difficult to be of benefit to children with suspected OSA on a large scale. Our goal was to use a machine learning method to identify children with OSA of varying severity using data on children's nighttime heart rate and blood oxygen data. METHODS This study included 3139 children who received diagnostic PSG with suspected OSA. Age, sex, BMI, 3 % oxygen depletion index (ODI), average nighttime heart rate and fastest heart rate were used as predictive features. Data sets were established with AHI ≥ 1, AHI ≥ 5, and AHI ≥ 10 as the diagnostic criteria for mild, moderate and severe OSA, and the samples of each data set were randomly divided into a training set and a test set at a ratio of 8:2. An OSA diagnostic model was established based on the XGBoost algorithm, and the ability of the machine learning model to diagnose OSA children with different severities was evaluated through different classification ability evaluation indicators. As a comparison, traditional classifier Logistic Regression was used to perform the same diagnostic task. The SHAP algorithm was used to evaluate the role of these features in the classification task. RESULTS We established a diagnostic model of OSA in children based on the XGBoost algorithm. On the test set, the AUCs of the model for diagnosing mild, moderate, and severe OSA were 0.95, 0.88, and 0.88, respectively, and the classification accuracy was 90.45 %, 85.67 %, and 89.81 %, respectively, perform better than Logistic Regression classifiers. ODI is the most important feature in all classification tasks, and a higher fastest heart rate and ODI make the model tend to classify samples as positive. A high BMI value caused the model to tend to classify samples as positive in the mild and moderate classification tasks and as negative in the classification task with severe OSA. CONCLUSION Using heart rate and blood oxygen data as the main features, a machine learning diagnostic model based on the XGBoost algorithm can accurately identify children with OSA at different severities. This diagnostic modality reduces the number of signals and the complexity of the diagnostic process compared to PSG, which could benefit children with suspected OSA who do not have the opportunity to receive a diagnostic PSG and provide a diagnostic priority reference for children awaiting a diagnostic PSG.
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Affiliation(s)
- Pengfei Ye
- Department of Otolaryngology, Head and Neck Surgery, Children's Hospital Capital Institute of Pediatrics, Beijing 100020, China
| | - Han Qin
- Department of Otolaryngology, Head and Neck Surgery, Beijing Children's Hospital, Capital Medical University, National Center for Children's Health, China, 100045
| | - Xiaojun Zhan
- Department of Otolaryngology, Head and Neck Surgery, Children's Hospital Capital Institute of Pediatrics, Beijing 100020, China
| | - Zhan Wang
- Department of Otolaryngology, Head and Neck Surgery, Children's Hospital Capital Institute of Pediatrics, Beijing 100020, China
| | - Chang Liu
- Department of Otolaryngology, Head and Neck Surgery, Children's Hospital Capital Institute of Pediatrics, Beijing 100020, China
| | - Beibei Song
- Department of Otolaryngology, Head and Neck Surgery, Children's Hospital Capital Institute of Pediatrics, Beijing 100020, China
| | - Yaru Kong
- Graduate School of Peking Union Medical University, Capital Institute of Pediatrics, Beijing 100020, China
| | - Xinbei Jia
- Department of Otolaryngology, Head and Neck Surgery, Beijing Children's Hospital, Capital Medical University, National Center for Children's Health, China, 100045
| | - Yuwei Qi
- Department of Otolaryngology, Head and Neck Surgery, Children's Hospital Capital Institute of Pediatrics, Beijing 100020, China
| | - Jie Ji
- Department of Otolaryngology, Head and Neck Surgery, Beijing Children's Hospital, Capital Medical University, National Center for Children's Health, China, 100045
| | - Li Chang
- Department of Respiratory Medicine, Children's Hospital Capital Institute of Pediatrics, Beijing 100020, China.
| | - Xin Ni
- Department of Otolaryngology, Head and Neck Surgery, Beijing Children's Hospital, Capital Medical University, National Center for Children's Health, China, 100045.
| | - Jun Tai
- Department of Otolaryngology, Head and Neck Surgery, Children's Hospital Capital Institute of Pediatrics, Beijing 100020, China.
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Wei K, Zou L, Liu G, Wang C. MS-Net: Sleep apnea detection in PPG using multi-scale block and shadow module one-dimensional convolutional neural network. Comput Biol Med 2023; 155:106469. [PMID: 36842220 DOI: 10.1016/j.compbiomed.2022.106469] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Revised: 11/11/2022] [Accepted: 12/19/2022] [Indexed: 01/11/2023]
Abstract
Sleep Apnea (SA) is a respiratory disorder that affects sleep. However, the SA detection method based on polysomnography is complex and not suitable for home use. The detection approach using Photoplethysmography is low cost and convenient, which can be used to widely detect SA. This study proposed a method combining a multi-scale one-dimensional convolutional neural network and a shadow one-dimensional convolutional neural network based on dual-channel input. The time-series feature information of different segments were extracted from multi-scale temporal structure. Moreover, shadow module was adopted to make full use of the redundant information generated after multi-scale convolution operation, which improved the accuracy and ensured the portability of the model. At the same time, we introduced balanced bootstrapping and class weight, which effectively alleviated the problem of unbalanced classes. Our method achieved the result of 82.0% average accuracy, 74.4% average sensitivity and 85.1% average specificity for per-segment SA detection, and reached 93.6% average accuracy for per-recording SA detection after 5-fold cross validation. Experimental results show that this method has good robustness. It can be regarded as an effective aid in SA detection in household use.
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Affiliation(s)
- Keming Wei
- School of Biomedical Engineering, Sun Yat-sen University, Guangzhou, Guangdong, China; Key Laboratory of Sensing Technology and Biomedical Instrument of Guangdong Province, Guangzhou, Guangdong, China.
| | - Lang Zou
- School of Biomedical Engineering, Sun Yat-sen University, Guangzhou, Guangdong, China; Key Laboratory of Sensing Technology and Biomedical Instrument of Guangdong Province, Guangzhou, Guangdong, China.
| | - Guanzheng Liu
- School of Biomedical Engineering, Shenzhen Campus of Sun Yat-sen University, Shenzhen, China; Laboratory of Wearable Technology and Artificial Intelligence for Healthcare of Guangdong Province, Shenzhen, Guangdong, China.
| | - Changhong Wang
- School of Biomedical Engineering, Sun Yat-sen University, Guangzhou, Guangdong, China; Laboratory of Wearable Technology and Artificial Intelligence for Healthcare of Guangdong Province, Shenzhen, Guangdong, China.
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14
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Bandyopadhyay A, Goldstein C. Clinical applications of artificial intelligence in sleep medicine: a sleep clinician's perspective. Sleep Breath 2023; 27:39-55. [PMID: 35262853 PMCID: PMC8904207 DOI: 10.1007/s11325-022-02592-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2021] [Revised: 01/25/2022] [Accepted: 03/02/2022] [Indexed: 12/27/2022]
Abstract
BACKGROUND The past few years have seen a rapid emergence of artificial intelligence (AI)-enabled technology in the field of sleep medicine. AI refers to the capability of computer systems to perform tasks conventionally considered to require human intelligence, such as speech recognition, decision-making, and visual recognition of patterns and objects. The practice of sleep tracking and measuring physiological signals in sleep is widely practiced. Therefore, sleep monitoring in both the laboratory and ambulatory environments results in the accrual of massive amounts of data that uniquely positions the field of sleep medicine to gain from AI. METHOD The purpose of this article is to provide a concise overview of relevant terminology, definitions, and use cases of AI in sleep medicine. This was supplemented by a thorough review of relevant published literature. RESULTS Artificial intelligence has several applications in sleep medicine including sleep and respiratory event scoring in the sleep laboratory, diagnosing and managing sleep disorders, and population health. While still in its nascent stage, there are several challenges which preclude AI's generalizability and wide-reaching clinical applications. Overcoming these challenges will help integrate AI seamlessly within sleep medicine and augment clinical practice. CONCLUSION Artificial intelligence is a powerful tool in healthcare that may improve patient care, enhance diagnostic abilities, and augment the management of sleep disorders. However, there is a need to regulate and standardize existing machine learning algorithms prior to its inclusion in the sleep clinic.
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Affiliation(s)
- Anuja Bandyopadhyay
- Department of Pediatrics, Indiana University School of Medicine, Indianapolis, IN, USA.
| | - Cathy Goldstein
- Department of Neurology, University of Michigan, Ann Arbor, MI, USA
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15
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Du Z, Wang J, Ren Y, Ren Y. A novel deep domain adaptation method for automated detection of sleep apnea/hypopnea events. Physiol Meas 2023; 44. [PMID: 36595309 DOI: 10.1088/1361-6579/aca879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Accepted: 12/01/2022] [Indexed: 12/05/2022]
Abstract
Objective.Sleep apnea-hypopnea syndrome (SAHS) is a common sleep-related respiratory disorder that is generally assessed for severity using polysomnography (PSG); however, the diversity of sampling devices and patients makes this not only costly but may also degrade the performance of the algorithms.Approach.This paper proposes a novel deep domain adaptation module which uses a long short-term memory-convolutional neural network embedded with the channel attention mechanism to achieve autonomous extraction of high-quality features. Meanwhile, a domain adaptation module was built to achieve domain-invariant feature extraction for reducing the differences in data distribution caused by different devices and other factors. In addition, during the training process, the algorithm used the last second label as the label of the PSG segment, so that second-by-second evaluation of respiratory events could be achieved.Main results.The algorithm applied the two datasets provided by PhysioNet as the source and target domains. The accuracy, sensitivity and specificity of the algorithm on the source domain were 86.46%, 86.11% and 93.17%, respectively, and on the target domain were 83.63%, 82.52%, 91.62%, respectively. The proposed algorithm showed strong generalization ability and the classification results were comparable to the current advanced methods. Besides, the apnea-hypopnea index values estimated by the proposed algorithm showed a high correlation with the manual scoring values on both domains.Significance.The proposed algorithm can effectively perform SAHS detection and evaluation with certain generalization.
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Affiliation(s)
- Zonglin Du
- Northeastern University, Shenyang, Liaoning, 110819, People's Republic of China
| | - Jiao Wang
- Northeastern University, Shenyang, Liaoning, 110819, People's Republic of China
| | - Yingxin Ren
- Northeastern University, Shenyang, Liaoning, 110819, People's Republic of China
| | - Yingtong Ren
- Northeastern University, Shenyang, Liaoning, 110819, People's Republic of China
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16
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Arslan RS, Ulutas H, Köksal AS, Bakir M, Çiftçi B. Sensitive deep learning application on sleep stage scoring by using all PSG data. Neural Comput Appl 2022. [DOI: 10.1007/s00521-022-08037-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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17
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Wei G, Di X, Zhang W, Geng S, Zhang D, Wang K, Fu Z, Hong S. Estimating critical values from electrocardiogram using a deep ordinal convolutional neural network. BMC Med Inform Decis Mak 2022; 22:295. [PMID: 36384646 PMCID: PMC9670442 DOI: 10.1186/s12911-022-02035-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Accepted: 10/28/2022] [Indexed: 11/17/2022] Open
Abstract
Background Critical values are commonly used in clinical laboratory tests to define health-related conditions of varying degrees. Knowing the values, people can quickly become aware of health risks, and the health professionals can take immediate actions and save lives. Methods In this paper, we propose a method that extends the concept of critical value to one of the most commonly used physiological signals in the clinical environment—Electrocardiogram (ECG). We first construct a mapping from common ECG diagnostic conclusions to critical values. After that, we build a 61-layer deep convolutional neural network named CardioV, which is characterized by an ordinal classifier. Results We conduct experiments on a large public ECG dataset, and demonstrate that CardioV achieves a mean absolute error of 0.4984 and a ROC-AUC score of 0.8735. In addition, we find that the model performs better for extreme critical values and the younger age group, while gender does not affect the performance. The ablation study confirms that the ordinal classification mechanism suits for estimating the critical values which contain ranking information. Moreover, model interpretation techniques help us discover that CardioV focuses on the characteristic ECG locations during the critical value estimation process. Conclusions As an ordinal classifier, CardioV performs well in estimating ECG critical values that can help people quickly identify different heart conditions. We obtain ROC-AUC scores above 0.8 for all four critical value categories, and find that the extreme values (0 (no risk) and 3 (high risk)) have better model performance than the other two (1 (low risk) and 2 (medium risk)). Results also show that gender does not affect the performance, and the older age group has worse performance than the younger age group. In addition, visualization techniques reveal that the model pays more attention to characteristic ECG locations.
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18
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Xu S, Faust O, Seoni S, Chakraborty S, Barua PD, Loh HW, Elphick H, Molinari F, Acharya UR. A review of automated sleep disorder detection. Comput Biol Med 2022; 150:106100. [PMID: 36182761 DOI: 10.1016/j.compbiomed.2022.106100] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 09/04/2022] [Accepted: 09/12/2022] [Indexed: 12/22/2022]
Abstract
Automated sleep disorder detection is challenging because physiological symptoms can vary widely. These variations make it difficult to create effective sleep disorder detection models which support hu-man experts during diagnosis and treatment monitoring. From 2010 to 2021, authors of 95 scientific papers have taken up the challenge of automating sleep disorder detection. This paper provides an expert review of this work. We investigated whether digital technology and Artificial Intelligence (AI) can provide automated diagnosis support for sleep disorders. We followed the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines during the content discovery phase. We compared the performance of proposed sleep disorder detection methods, involving differ-ent datasets or signals. During the review, we found eight sleep disorders, of which sleep apnea and insomnia were the most studied. These disorders can be diagnosed using several kinds of biomedical signals, such as Electrocardiogram (ECG), Polysomnography (PSG), Electroencephalogram (EEG), Electromyogram (EMG), and snore sound. Subsequently, we established areas of commonality and distinctiveness. Common to all reviewed papers was that AI models were trained and tested with labelled physiological signals. Looking deeper, we discovered that 24 distinct algorithms were used for the detection task. The nature of these algorithms evolved, before 2017 only traditional Machine Learning (ML) was used. From 2018 onward, both ML and Deep Learning (DL) methods were used for sleep disorder detection. The strong emergence of DL algorithms has considerable implications for future detection systems because these algorithms demand significantly more data for training and testing when compared with ML. Based on our review results, we suggest that both type and amount of labelled data is crucial for the design of future sleep disorder detection systems because this will steer the choice of AI algorithm which establishes the desired decision support. As a guiding principle, more labelled data will help to represent the variations in symptoms. DL algorithms can extract information from these larger data quantities more effectively, therefore; we predict that the role of these algorithms will continue to expand.
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Affiliation(s)
- Shuting Xu
- Cogninet Brain Team, Sydney, NSW, 2010, Australia
| | - Oliver Faust
- Anglia Ruskin University, East Rd, Cambridge CB1 1PT, UK.
| | - Silvia Seoni
- Department of Electronics and Telecommunications, Politecnico di Torino, Torino, Italy
| | - Subrata Chakraborty
- School of Science and Technology, Faculty of Science, Agriculture, Business and Law, University of New England, Armidale, NSW, 2351, Australia; Centre for Advanced Modelling and Geospatial Lnformation Systems (CAMGIS), Faculty of Engineer and Information Technology, University of Technology Sydney, Sydney, NSW, 2007, Australia
| | - Prabal Datta Barua
- Cogninet Brain Team, Sydney, NSW, 2010, Australia; Faculty of Engineering and Information Technology, University of Technology Sydney, Sydney, NSW, 2007, Australia; School of Business (Information System), University of Southern Queensland, Australia
| | - Hui Wen Loh
- School of Science and Technology, Singapore University of Social Sciences, 463 Clementi Road, 599494, Singapore
| | | | - Filippo Molinari
- Department of Electronics and Telecommunications, Politecnico di Torino, Torino, Italy
| | - U Rajendra Acharya
- School of Business (Information System), University of Southern Queensland, Australia; School of Science and Technology, Singapore University of Social Sciences, 463 Clementi Road, 599494, Singapore; Department of Computer Engineering, Ngee Ann Polytechnic, Singapore, Singapore; Department of Bioinformatics and Medical Engineering, Asia University, Taichung, Taiwan.
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19
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Yoo J, Yoo I, Youn I, Kim SM, Yu R, Kim K, Kim K, Lee SB. Residual one-dimensional convolutional neural network for neuromuscular disorder classification from needle electromyography signals with explainability. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2022; 226:107079. [PMID: 36191354 DOI: 10.1016/j.cmpb.2022.107079] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Revised: 07/25/2022] [Accepted: 08/20/2022] [Indexed: 06/16/2023]
Abstract
BACKGROUND AND OBJECTIVE Neuromuscular disorders are diseases that damage our ability to control body movements. Needle electromyography (nEMG) is often used to diagnose neuromuscular disorders, which is an electrophysiological test measuring electric signals generated from a muscle using an invasive needle. Characteristics of nEMG signals are manually analyzed by an electromyographer to diagnose the types of neuromuscular disorders, and this process is highly dependent on the subjective experience of the electromyographer. Contemporary computer-aided methods utilized deep learning image classification models to classify nEMG signals which are not optimized for classifying signals. Additionally, model explainability was not addressed which is crucial in medical applications. This study aims to improve prediction accuracy, inference time, and explain model predictions in nEMG neuromuscular disorder classification. METHODS This study introduces the nEMGNet, a one-dimensional convolutional neural network with residual connections designed to extract features from raw signals with higher accuracy and faster speed compared to image classification models from previous works. Next, the divide-and-vote (DiVote) algorithm was designed to integrate each subject's heterogeneous nEMG signal data structures and to utilize muscle subtype information for higher accuracy. Finally, feature visualization was used to identify the causality of nEMGNet diagnosis predictions, to ensure that nEMGNet made predictions on valid features, not artifacts. RESULTS The proposed method was tested using 376 nEMG signals measured from 57 subjects between June 2015 to July 2020 in Seoul National University Hospital. The results from the three-class classification task demonstrated that nEMGNet's prediction accuracy of nEMG signal segments was 62.35%, and the subject diagnosis prediction accuracy of nEMGNet and the DiVote algorithm was 83.69 %, over 5-fold cross-validation. nEMGNet outperformed all models from previous works on nEMG diagnosis classification, and heuristic analysis of feature visualization results indicate that nEMGNet learned relevant nEMG signal characteristics. CONCLUSIONS This study introduced nEMGNet and DiVote algorithm which demonstrated fast and accurate performance in predicting neuromuscular disorders based on nEMG signals. The proposed method may be applied in medicine to support real-time electrophysiologic diagnosis.
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Affiliation(s)
- Jaesung Yoo
- School of Electrical Engineering, Korea University, Seoul, Republic of Korea
| | - Ilhan Yoo
- Department of Neurology, Nowon Eulji Medical Center, Eulji University School of Medicine, Seoul, Republic of Korea
| | - Ina Youn
- Department of Computer Science, New York University, NY, USA
| | - Sung-Min Kim
- Department of Neurology, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea
| | - Ri Yu
- Department of Software and Computer Engineering, Department of Artificial Intelligence, Ajou University
| | - Kwangsoo Kim
- Transdisciplinary Department of Medicine and Advanced Technology, Seoul National University Hospital, Seoul, Republic of Korea
| | - Keewon Kim
- Department of Rehabilitation Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
| | - Seung-Bo Lee
- Department of Medical Informatics: Keimyung University School of Medicine, Daegu, Republic of Korea.
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20
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Abstract
Sleep Apnoea (SA) is a common chronic illness that affects nearly 1 billion people around the world, and the number of patients is rising. SA causes a wide range of psychological and physiological ailments that have detrimental effects on a patient’s wellbeing. The high prevalence and negative health effects make SA a public health problem. Whilst the current gold standard diagnostic procedure, polysomnography (PSG), is reliable, it is resource-expensive and can have a negative impact on sleep quality, as well as the environment. With this study, we focus on the environmental impact that arises from resource utilisation during SA detection, and we propose remote monitoring (RM) as a potential solution that can improve the resource efficiency and reduce travel. By reusing infrastructure technology, such as mobile communication, cloud computing, and artificial intelligence (AI), RM establishes SA detection and diagnosis support services in the home environment. However, there are considerable barriers to a widespread adoption of this technology. To gain a better understanding of the available technology and its associated strength, as well as weaknesses, we reviewed scientific papers that used various strategies for RM-based SA detection. Our review focused on 113 studies that were conducted between 2018 and 2022 and that were listed in Google Scholar. We found that just over 50% of the proposed RM systems incorporated real time signal processing and around 20% of the studies did not report on this important aspect. From an environmental perspective, this is a significant shortcoming, because 30% of the studies were based on measurement devices that must travel whenever the internal buffer is full. The environmental impact of that travel might constitute an additional need for changing from offline to online SA detection in the home environment.
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21
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Xie B, Meng J, Li B, Harland A. Biosignal-based transferable attention Bi-ConvGRU deep network for hand-gesture recognition towards online upper-limb prosthesis control. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2022; 224:106999. [PMID: 35841852 DOI: 10.1016/j.cmpb.2022.106999] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Revised: 06/13/2022] [Accepted: 06/30/2022] [Indexed: 06/15/2023]
Abstract
BACKGROUND AND OBJECTIVE Upper-limb amputation can significantly affect a person's capabilities with a dramatic impact on their quality of life. As a biological signal, surface electromyogram (sEMG) provides a non-invasive means to measure underlying muscle activation patterns, corresponding to specific hand gestures. This project aims to develop a real-time deep learning based recognition model to automatically and reliably recognise these complex signals of a wide range of daily hand gestures from amputees and non-amputees. METHODS This paper proposes an attention bidirectional Convolutional Gated Recurrent Unit (Bi-ConvGRU) deep neural network for hand-gesture recognition. By training on sEMG data from both amputees and non-amputees, the model can learn to recognise a group of fine-grained hand movements. This is a significantly more challenging and underexplored area, compared to existing studies on coarse-control in lower limbs. One dimensional CNNs are initially used to extract intra-channel features. The novel use of a bidirectional sequential GRU (Bi-GRU) deep neural network allows the exploration of correlation of muscle activation among multi-channel sEMG signals from both prior and posterior time sequences. Importantly, the attention mechanism is employed following Bi-GRU layers. This enables the model to learn vital parts and feature weights, increasing robustness to bio-data noise and irregularity. Finally, we introduce the first of its kind transfer learning, demonstrating that a baseline model pre-trained with non-amputee data can be effectively refined with amputee data to build a personalised model for amputees. RESULTS The attention Bi-ConvGRU was evaluated on the benchmark database Ninapro, and achieved an average accuracy of 88.7%, outperforming the state-of-the-art on 18 gesture recognition by 6.7%. CONCLUSIONS To our knowledge, the developed end-to-end deep learning model is the first of its kind that enables reliable predictive decision making in short time windows (160ms). This reduced latency limits physiological awareness, enabling the potential for real-time, online and thus more intuitive bio-control of prosthetic devices for amputees.
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Affiliation(s)
- Baao Xie
- School of Electrical and Information Engineering, Tianjin University, China; Eastern Institute of Advanced Study, China
| | - James Meng
- Lancashire Teaching Hospitals, NHS Foundation Trust, PR2 9HT, UK
| | - Baihua Li
- Department of Computer Science, Loughborough University, LE11 3TU, UK.
| | - Andy Harland
- School of Mechanical, Electrical and Manufacturing Engineering, Loughborough University, LE11 3TU, UK
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22
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Feng Y, Geng S, Chu J, Fu Z, Hong S. Building and training a deep spiking neural network for ECG classification. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103749] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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23
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Jiménez-García J, García M, Gutiérrez-Tobal GC, Kheirandish-Gozal L, Vaquerizo-Villar F, Álvarez D, del Campo F, Gozal D, Hornero R. A 2D convolutional neural network to detect sleep apnea in children using airflow and oximetry. Comput Biol Med 2022; 147:105784. [DOI: 10.1016/j.compbiomed.2022.105784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Revised: 04/19/2022] [Accepted: 06/26/2022] [Indexed: 11/03/2022]
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Sun C, Hong S, Wang J, Dong X, Han F, Li H. A systematic review of deep learning methods for modeling electrocardiograms during sleep. Physiol Meas 2022; 43. [PMID: 35853448 DOI: 10.1088/1361-6579/ac826e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Accepted: 07/19/2022] [Indexed: 11/11/2022]
Abstract
Sleep is one of the most important human physiological activities and plays an essential role in human health. Polysomnography (PSG) is the gold standard for measuring sleep quality and disorders, but it is time-consuming, labor-intensive, and prone to errors. Current research has confirmed the correlations between sleep and the respiratory/circulatory system. Electrocardiography (ECG) is convenient to perform, and ECG data are rich in breathing information. Therefore, sleep research based on ECG data has become popular. Currently, deep learning (DL) methods have achieved promising results on predictive health care tasks using ECG signals. Therefore, in this review, we systematically identify recent research studies and analyze them from the perspectives of data, model, and task. We discuss the shortcomings, summarize the findings, and highlight the potential opportunities. For sleep-related tasks, many ECG-based DL methods produce more accurate results than traditional approaches by combining multiple signal features and model structures. Methods that are more interpretable, scalable, and transferable will become ubiquitous in the daily practice of medicine and ambient-assisted-living applications. This paper is the first systematic review of ECG-based DL methods for sleep tasks.
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Affiliation(s)
- Chenxi Sun
- School of Artificial Intelligence, Peking University, No. 5, Yiheyuan Road, Haidian District, Beijing, 100871, CHINA
| | - Shenda Hong
- National Institute of Health Data Science, Peking University, No. 5, Yiheyuan Road, Haidian District, Beijing, Beijing, 100871, CHINA
| | - Jingyu Wang
- Sleep Center, Department of Respiratory and Critical Care Medicine, Peking University People's Hospital, No. 11, Xizhimen South Street, Xicheng District, Beijing, 100044, CHINA
| | - Xiaosong Dong
- Sleep Center, Department of Respiratory and Critical Care Medicine, Peking University People's Hospital, No. 11, Xizhimen South Street, Xicheng District, Beijing, 100044, CHINA
| | - Fang Han
- Sleep Center, Department of Respiratory and Critical Care Medicine, Peking University People's Hospital, No. 11, Xizhimen South Street, Xicheng District, Beijing, 100044, CHINA
| | - Hongyan Li
- School of Artificial Intelligence, Peking University, No. 5, Yiheyuan Road, Haidian District, Beijing, Beijing, 100871, CHINA
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Musa N, Gital AY, Aljojo N, Chiroma H, Adewole KS, Mojeed HA, Faruk N, Abdulkarim A, Emmanuel I, Folawiyo YY, Ogunmodede JA, Oloyede AA, Olawoyin LA, Sikiru IA, Katb I. A systematic review and Meta-data analysis on the applications of Deep Learning in Electrocardiogram. JOURNAL OF AMBIENT INTELLIGENCE AND HUMANIZED COMPUTING 2022; 14:9677-9750. [PMID: 35821879 PMCID: PMC9261902 DOI: 10.1007/s12652-022-03868-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/15/2021] [Accepted: 04/26/2022] [Indexed: 06/08/2023]
Abstract
The success of deep learning over the traditional machine learning techniques in handling artificial intelligence application tasks such as image processing, computer vision, object detection, speech recognition, medical imaging and so on, has made deep learning the buzz word that dominates Artificial Intelligence applications. From the last decade, the applications of deep learning in physiological signals such as electrocardiogram (ECG) have attracted a good number of research. However, previous surveys have not been able to provide a systematic comprehensive review including biometric ECG based systems of the applications of deep learning in ECG with respect to domain of applications. To address this gap, we conducted a systematic literature review on the applications of deep learning in ECG including biometric ECG based systems. The study analyzed systematically, 150 primary studies with evidence of the application of deep learning in ECG. The study shows that the applications of deep learning in ECG have been applied in different domains. We presented a new taxonomy of the domains of application of the deep learning in ECG. The paper also presented discussions on biometric ECG based systems and meta-data analysis of the studies based on the domain, area, task, deep learning models, dataset sources and preprocessing methods. Challenges and potential research opportunities were highlighted to enable novel research. We believe that this study will be useful to both new researchers and expert researchers who are seeking to add knowledge to the already existing body of knowledge in ECG signal processing using deep learning algorithm. Supplementary information The online version contains supplementary material available at 10.1007/s12652-022-03868-z.
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Affiliation(s)
- Nehemiah Musa
- Department of Mathematical Sciences, Abubakar Tafawa Balewa University, Bauchi, Nigeria
| | - Abdulsalam Ya’u Gital
- Department of Mathematical Sciences, Abubakar Tafawa Balewa University, Bauchi, Nigeria
| | | | - Haruna Chiroma
- Computer Science and Engineering, University of Hafr Al-Batin, Hafr, Saudi Arabia
- Computer Science and Engineering , University of Hafr Al-Batin, Hafr Al-Batin, Saudi Arabia
| | - Kayode S. Adewole
- Department of Computer Science, University of Ilorin, Ilorin, Nigeria
| | - Hammed A. Mojeed
- Department of Computer Science, University of Ilorin, Ilorin, Nigeria
| | - Nasir Faruk
- Department of Physics, Sule Lamido University, Kafin Hausa, Nigeria
| | - Abubakar Abdulkarim
- Department of Electrical Engineering, Ahmadu Bello University Zaria, Zaria, Nigeria
| | - Ifada Emmanuel
- Department of Physics, Sule Lamido University, Kafin Hausa, Nigeria
| | | | | | | | | | | | - Ibrahim Katb
- Computer Science and Engineering, University of Hafr Al-Batin, Hafr, Saudi Arabia
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Castillo-Escario Y, Werthen-Brabants L, Groenendaal W, Deschrijver D, Jane R. Convolutional Neural Networks for Apnea Detection from Smartphone Audio Signals: Effect of Window Size. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2022; 2022:666-669. [PMID: 36085651 DOI: 10.1109/embc48229.2022.9871396] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Although sleep apnea is one of the most prevalent sleep disorders, most patients remain undiagnosed and untreated. The gold standard for sleep apnea diagnosis, polysomnography, has important limitations such as its high cost and complexity. This leads to a growing need for novel cost-effective systems. Mobile health tools and deep learning algorithms are nowadays being proposed as innovative solutions for automatic apnea detection. In this work, a convolutional neural network (CNN) is trained for the identification of apnea events from the spectrograms of audio signals recorded with a smartphone. A systematic comparison of the effect of different window sizes on the model performance is provided. According to the results, the best models are obtained with 60 s windows (sensitivity-0.72, specilicity-0.89, AUROC = 0.88), For smaller windows, the model performance can be negatively impacted, because the windows become shorter than most apnea events, by which sound reductions can no longer be appreciated. On the other hand, longer windows tend to include multiple or mixed events, that will confound the model. This careful trade-off demonstrates the importance of selecting a proper window size to obtain models with adequate predictive power. This paper shows that CNNs applied to smartphone audio signals can facilitate sleep apnea detection in a realistic setting and is a first step towards an automated method to assist sleep technicians. Clinical Relevance- The results show the effect of the window size on the predictive power of CNNs for apnea detection. Furthermore, the potential of smartphones, audio signals, and deep neural networks for automatic sleep apnea screening is demonstrated.
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Ayatollahi A, Afrakhteh S, Soltani F, Saleh E. Sleep apnea detection from ECG signal using deep CNN-based structures. EVOLVING SYSTEMS 2022. [DOI: 10.1007/s12530-022-09445-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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28
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Rickert CA, Lieleg O. Machine learning approaches for biomolecular, biophysical, and biomaterials research. BIOPHYSICS REVIEWS 2022; 3:021306. [PMID: 38505413 PMCID: PMC10914139 DOI: 10.1063/5.0082179] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Accepted: 05/12/2022] [Indexed: 03/21/2024]
Abstract
A fluent conversation with a virtual assistant, person-tailored news feeds, and deep-fake images created within seconds-all those things that have been unthinkable for a long time are now a part of our everyday lives. What these examples have in common is that they are realized by different means of machine learning (ML), a technology that has fundamentally changed many aspects of the modern world. The possibility to process enormous amount of data in multi-hierarchical, digital constructs has paved the way not only for creating intelligent systems but also for obtaining surprising new insight into many scientific problems. However, in the different areas of biosciences, which typically rely heavily on the collection of time-consuming experimental data, applying ML methods is a bit more challenging: Here, difficulties can arise from small datasets and the inherent, broad variability, and complexity associated with studying biological objects and phenomena. In this Review, we give an overview of commonly used ML algorithms (which are often referred to as "machines") and learning strategies as well as their applications in different bio-disciplines such as molecular biology, drug development, biophysics, and biomaterials science. We highlight how selected research questions from those fields were successfully translated into machine readable formats, discuss typical problems that can arise in this context, and provide an overview of how to resolve those encountered difficulties.
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An Effective and Lightweight Deep Electrocardiography Arrhythmia Recognition Model Using Novel Special and Native Structural Regularization Techniques on Cardiac Signal. JOURNAL OF HEALTHCARE ENGINEERING 2022; 2022:3408501. [PMID: 35449862 PMCID: PMC9018174 DOI: 10.1155/2022/3408501] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/07/2021] [Revised: 01/19/2022] [Accepted: 03/15/2022] [Indexed: 02/05/2023]
Abstract
Recently, cardiac arrhythmia recognition from electrocardiography (ECG) with deep learning approaches is becoming popular in clinical diagnosis systems due to its good prognosis findings, where expert data preprocessing and feature engineering are not usually required. But a lightweight and effective deep model is highly demanded to face the challenges of deploying the model in real-life applications and diagnosis accurately. In this work, two effective and lightweight deep learning models named Deep-SR and Deep-NSR are proposed to recognize ECG beats, which are based on two-dimensional convolution neural networks (2D CNNs) while using different structural regularizations. First, 97720 ECG beats extracted from all records of a benchmark MIT-BIH arrhythmia dataset have been transformed into 2D RGB (red, green, and blue) images that act as the inputs to the proposed 2D CNN models. Then, the optimization of the proposed models is performed through the proper initialization of model layers, on-the-fly augmentation, regularization techniques, Adam optimizer, and weighted random sampler. Finally, the performance of the proposed models is evaluated by a stratified 5-fold cross-validation strategy along with callback features. The obtained overall accuracy of recognizing normal beat and three arrhythmias (V-ventricular ectopic, S-supraventricular ectopic, and F-fusion) based on the Association for the Advancement of Medical Instrumentation (AAMI) is 99.93%, and 99.96% for the proposed Deep-SR model and Deep-NSR model, which demonstrate that the effectiveness of the proposed models has surpassed the state-of-the-art models and also expresses the higher model generalization. The received results with model size suggest that the proposed CNN models especially Deep-NSR could be more useful in wearable devices such as medical vests, bracelets for long-term monitoring of cardiac conditions, and in telemedicine to accurate diagnose the arrhythmia from ECG automatically. As a result, medical costs of patients and work pressure on physicians in medicals and clinics would be reduced effectively.
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JeyaJothi ES, Anitha J, Rani S, Tiwari B. A Comprehensive Review: Computational Models for Obstructive Sleep Apnea Detection in Biomedical Applications. BIOMED RESEARCH INTERNATIONAL 2022; 2022:7242667. [PMID: 35224099 PMCID: PMC8866013 DOI: 10.1155/2022/7242667] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/22/2021] [Accepted: 12/22/2021] [Indexed: 02/06/2023]
Abstract
Obstructive sleep apnea (OSA) is a sleep disorder characterized by periodic episodes of partial or complete upper airway obstruction caused by narrowing or collapse of the pharyngeal airway despite ongoing breathing efforts during sleep. Fall in the blood oxygen saturation and cortical arousals are prompted by this reduction in the airflow which lasts for at least 10 seconds. Impaired labor performance, debilitated quality of life, excessive daytime sleepiness, high snoring, and tiredness even after a whole night's sleep are the primary symptoms of OSA. In due course, the long-standing contributions of OSA culminate in hypertension, arrhythmia, cerebrovascular disease, and heart failure. The traditional diagnostic approach of OSA is the laboratory-based polysomnography (PSG) overnight sleep study, which is a tedious and labor-intensive process that exaggerates the discomfort to the patient. With the advent of computer-aided diagnosis (CAD), automatic detection of OSA has gained increasing interest among researchers in the area of sleep disorders as it influences both diagnostic and therapeutic decisions. The research literature on sleep apnea published during the last decade has been surveyed, focusing on the varied screening approaches accustomed to identifying OSA events and the developmental knowledge offered by multiple contributors from the software perspective. The current study presents an overview of the pathophysiology of OSA, the detection methods, physiological signals related to OSA, the different preprocessing, feature extraction, feature selection, and classification techniques employed for the detection and classification of OSA. Consequently, the research challenges and research gaps in the diagnosis of OSA are identified, critically analyzed, and presented in the best possible light.
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Affiliation(s)
- E. Smily JeyaJothi
- Department of Biomedical Instrumentation Engineering, Avinashilingam Institute for Home Science and Higher Education for Women, Coimbatore 641108, India
| | - J. Anitha
- Department of Electronics and Communication Engineering, Karunya Institute of Technology and Sciences, Coimbatore 641114, India
| | - Shalli Rani
- Chitkara University Institute of Engineering and Technology, Chitkara University, Rajpura Punjab-140401, India
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31
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Qin H, Liu G. A dual-model deep learning method for sleep apnea detection based on representation learning and temporal dependence. Neurocomputing 2022. [DOI: 10.1016/j.neucom.2021.12.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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32
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Hybridization of soft-computing algorithms with neural network for prediction obstructive sleep apnea using biomedical sensor measurements. Neural Comput Appl 2022. [DOI: 10.1007/s00521-022-06919-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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33
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Hong S, Zhang W, Sun C, Zhou Y, Li H. Practical Lessons on 12-Lead ECG Classification: Meta-Analysis of Methods From PhysioNet/Computing in Cardiology Challenge 2020. Front Physiol 2022; 12:811661. [PMID: 35095568 PMCID: PMC8795785 DOI: 10.3389/fphys.2021.811661] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Accepted: 12/21/2021] [Indexed: 11/13/2022] Open
Abstract
Cardiovascular diseases (CVDs) are one of the most fatal disease groups worldwide. Electrocardiogram (ECG) is a widely used tool for automatically detecting cardiac abnormalities, thereby helping to control and manage CVDs. To encourage more multidisciplinary researches, PhysioNet/Computing in Cardiology Challenge 2020 (Challenge 2020) provided a public platform involving multi-center databases and automatic evaluations for ECG classification tasks. As a result, 41 teams successfully submitted their solutions and were qualified for rankings. Although Challenge 2020 was a success, there has been no in-depth methodological meta-analysis of these solutions, making it difficult for researchers to benefit from the solutions and results. In this study, we aim to systematically review the 41 solutions in terms of data processing, feature engineering, model architecture, and training strategy. For each perspective, we visualize and statistically analyze the effectiveness of the common techniques, and discuss the methodological advantages and disadvantages. Finally, we summarize five practical lessons based on the aforementioned analysis: (1) Data augmentation should be employed and adapted to specific scenarios; (2) Combining different features can improve performance; (3) A hybrid design of different types of deep neural networks (DNNs) is better than using a single type; (4) The use of end-to-end architectures should depend on the task being solved; (5) Multiple models are better than one. We expect that our meta-analysis will help accelerate the research related to ECG classification based on machine-learning models.
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Affiliation(s)
- Shenda Hong
- National Institute of Health Data Science, Peking University, Beijing, China
- Institute of Medical Technology, Peking University Health Science Center, Beijing, China
| | - Wenrui Zhang
- Department of Mathematics, National University of Singapore, Singapore, Singapore
| | - Chenxi Sun
- Key Laboratory of Machine Perception (Ministry of Education), Peking University, Beijing, China
- School of Electronics Engineering and Computer Science, Peking University, Beijing, China
| | - Yuxi Zhou
- School of Computer Science and Engineering, Tianjin University of Technology, Tianjin, China
- RIIT, TNList, Department of Computer Science and Technology, Tsinghua University, Beijing, China
| | - Hongyan Li
- Key Laboratory of Machine Perception (Ministry of Education), Peking University, Beijing, China
- School of Electronics Engineering and Computer Science, Peking University, Beijing, China
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34
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Yang Q, Zou L, Wei K, Liu G. Obstructive sleep apnea detection from single-lead electrocardiogram signals using one-dimensional squeeze-and-excitation residual group network. Comput Biol Med 2022; 140:105124. [PMID: 34896885 DOI: 10.1016/j.compbiomed.2021.105124] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2021] [Revised: 12/04/2021] [Accepted: 12/04/2021] [Indexed: 11/17/2022]
Abstract
Obstructive sleep apnea (OSA), which has high morbidity and complications, is diagnosed via polysomnography (PSG). However, this method is expensive, time-consuming, and causes discomfort to the patient. Single-lead electrocardiogram (ECG) is a potential alternative to PSG for OSA diagnosis. Recent studies have successfully applied deep learning methods to OSA detection using ECG and obtained great success. However, most of these methods only focus on heart rate variability (HRV), ignoring the importance of ECG-derived respiration (EDR). In addition, they used relatively simple networks, and cannot extract more complex features. In this study, we proposed a one-dimensional squeeze-and-excitation (SE) residual group network to thoroughly extract the complementary information between HRV and EDR. We used the released and withheld sets in the Apnea-ECG dataset to develop and test the proposed method, respectively. In the withheld set, the method has an accuracy of 90.3%, a sensitivity of 87.6%, and a specificity of 91.9% for per-segment detection, indicating an improvement over existing methods for the same dataset. The proposed method can be integrated with wearable devices to realize inexpensive, convenient, and highly efficient OSA detectors.
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Affiliation(s)
- Quanan Yang
- School of Biomedical Engineering, Shenzhen Campus of Sun Yat-sen University, Shenzhen, 518107, China
| | - Lang Zou
- School of Biomedical Engineering, Shenzhen Campus of Sun Yat-sen University, Shenzhen, 518107, China
| | - Keming Wei
- School of Biomedical Engineering, Shenzhen Campus of Sun Yat-sen University, Shenzhen, 518107, China
| | - Guanzheng Liu
- School of Biomedical Engineering, Shenzhen Campus of Sun Yat-sen University, Shenzhen, 518107, China.
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35
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Detection of sleep apnea using deep neural networks and single-lead ECG signals. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103125] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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36
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Fernandes F, Stefenon SF, Seman LO, Nied A, Ferreira FCS, Subtil MCM, Klaar ACR, Leithardt VRQ. Long short-term memory stacking model to predict the number of cases and deaths caused by COVID-19. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS 2021. [DOI: 10.3233/jifs-212788] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
The long short-term memory (LSTM) is a high-efficiency model for forecasting time series, for being able to deal with a large volume of data from a time series with nonlinearities. As a case study, the stacked LSTM will be used to forecast the growth of the pandemic of COVID-19, based on the increase in the number of contaminated and deaths in the State of Santa Catarina, Brazil. COVID-19 has been spreading very quickly, causing great concern in relation to the ability to care for critically ill patients. Control measures are being imposed by governments with the aim of reducing the contamination and the spreading of viruses. The forecast of the number of contaminated and deaths caused by COVID-19 can help decision making regarding the adopted restrictions, making them more or less rigid depending on the pandemic’s control capacity. The use of LSTM stacking shows an R2 of 0.9625 for confirmed cases and 0.9656 for confirmed deaths caused by COVID-19, being superior to the combinations among other evaluated models.
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Affiliation(s)
- Filipe Fernandes
- Electrical Engineering Graduate Program, Santa Catarina State University. R. Paulo Malschitzki, North Industrial Zone, Joinville, Brazil
| | - Stéfano Frizzo Stefenon
- Electrical Engineering Graduate Program, Santa Catarina State University. R. Paulo Malschitzki, North Industrial Zone, Joinville, Brazil
- Fondazione Bruno Kessler, Istituto per la Ricerca Scientifica e Tecnologica. ViaSommarive, Povo, Trento, Italy
- Computer Scienceand Artificial Intelligence, University of Udine. Via delleScienze 206, 33100 Udine, Italy
| | - Laio Oriel Seman
- Graduate Programin Applied Computer Science, University of Vale do Itajaí. Uruguai 458, Centro, Itajaí, 88302-202, Brazil
| | - Ademir Nied
- Electrical Engineering Graduate Program, Santa Catarina State University. R. Paulo Malschitzki, North Industrial Zone, Joinville, Brazil
| | | | | | | | - Valderi Reis Quietinho Leithardt
- VALORIZA, Research Center for Endogenous Resources Valorization, Instituto Politécnicode Portalegre. 7300-555 Portalegre, Portugal
- COPELABS, Universidade Lusófona deHumanidades e Tecnologias. Campo Grande 376, 1749-024 Lisboa, Portugal
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Zavanelli N, Kim H, Kim J, Herbert R, Mahmood M, Kim YS, Kwon S, Bolus NB, Torstrick FB, Lee CSD, Yeo WH. At-home wireless monitoring of acute hemodynamic disturbances to detect sleep apnea and sleep stages via a soft sternal patch. SCIENCE ADVANCES 2021; 7:eabl4146. [PMID: 34936438 PMCID: PMC8694628 DOI: 10.1126/sciadv.abl4146] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Accepted: 11/04/2021] [Indexed: 05/06/2023]
Abstract
Obstructive sleep apnea (OSA) affects more than 900 million adults globally and can create serious health complications when untreated; however, 80% of cases remain undiagnosed. Critically, current diagnostic techniques are fundamentally limited by low throughputs and high failure rates. Here, we report a wireless, fully integrated, soft patch with skin-like mechanics optimized through analytical and computational studies to capture seismocardiograms, electrocardiograms, and photoplethysmograms from the sternum, allowing clinicians to investigate the cardiovascular response to OSA during home sleep tests. In preliminary trials with symptomatic and control subjects, the soft device demonstrated excellent ability to detect blood-oxygen saturation, respiratory effort, respiration rate, heart rate, cardiac pre-ejection period and ejection timing, aortic opening mechanics, heart rate variability, and sleep staging. Last, machine learning is used to autodetect apneas and hypopneas with 100% sensitivity and 95% precision in preliminary at-home trials with symptomatic patients, compared to data scored by professionally certified sleep clinicians.
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Affiliation(s)
- Nathan Zavanelli
- George W. Woodruff School of Mechanical Engineering, College of Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA
- Center for Human-Centric Interfaces and Engineering at the Institute for Electronics and Nanotechnology, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Hojoong Kim
- George W. Woodruff School of Mechanical Engineering, College of Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA
- Center for Human-Centric Interfaces and Engineering at the Institute for Electronics and Nanotechnology, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Jongsu Kim
- George W. Woodruff School of Mechanical Engineering, College of Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA
- Center for Human-Centric Interfaces and Engineering at the Institute for Electronics and Nanotechnology, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Robert Herbert
- George W. Woodruff School of Mechanical Engineering, College of Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA
- Center for Human-Centric Interfaces and Engineering at the Institute for Electronics and Nanotechnology, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Musa Mahmood
- George W. Woodruff School of Mechanical Engineering, College of Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA
- Center for Human-Centric Interfaces and Engineering at the Institute for Electronics and Nanotechnology, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Yun-Soung Kim
- George W. Woodruff School of Mechanical Engineering, College of Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA
- Center for Human-Centric Interfaces and Engineering at the Institute for Electronics and Nanotechnology, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Shinjae Kwon
- George W. Woodruff School of Mechanical Engineering, College of Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA
- Center for Human-Centric Interfaces and Engineering at the Institute for Electronics and Nanotechnology, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | | | | | | | - Woon-Hong Yeo
- George W. Woodruff School of Mechanical Engineering, College of Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA
- Center for Human-Centric Interfaces and Engineering at the Institute for Electronics and Nanotechnology, Georgia Institute of Technology, Atlanta, GA 30332, USA
- Wallace H. Coulter Department of Biomedical Engineering, Parker H. Petit Institute for Bioengineering and Biosciences, Georgia Institute of Technology and Emory University, Atlanta, GA 30332, USA
- Institute for Robotics and Intelligent Machines, Neural Engineering Center, Flexible and Wearable Electronics Advanced Research, Institute for Materials, Georgia Institute of Technology, Atlanta, GA 30332, USA
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John A, Nundy KK, Cardiff B, John D. Multimodal Multiresolution Data Fusion Using Convolutional Neural Networks for IoT Wearable Sensing. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2021; 15:1161-1173. [PMID: 34882563 DOI: 10.1109/tbcas.2021.3134043] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
With advances in circuit design and sensing technology, the acquisition of data from a large number of Internet of Things (IoT) sensors simultaneously to enable more accurate inferences has become mainstream. In this work, we propose a novel convolutional neural network (CNN) model for the fusion of multimodal and multiresolution data obtained from several sensors. The proposed model enables the fusion of multiresolution sensor data, without having to resort to padding/ resampling to correct for frequency resolution differences even when carrying out temporal inferences like high-resolution event detection. The performance of the proposed model is evaluated for sleep apnea event detection, by fusing three different sensor signals obtained from UCD St. Vincent University Hospital's sleep apnea database. The proposed model is generalizable and this is demonstrated by incremental performance improvements, proportional to the number of sensors used for fusion. A selective dropout technique is used to prevent overfitting of the model to any specific high-resolution input, and increase the robustness of fusion to signal corruption from any sensor source. A fusion model with electrocardiogram (ECG), Peripheral oxygen saturation signal (SpO2), and abdominal movement signal achieved an accuracy of 99.72% and a sensitivity of 98.98%. Energy per classification of the proposed fusion model was estimated to be approximately 5.61 μJ for on-chip implementation. The feasibility of pruning to reduce the complexity of the fusion models was also studied.
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39
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Classification of Obstructive Sleep Apnoea from single-lead ECG signals using convolutional neural and Long Short Term Memory networks. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102906] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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40
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Ramachandran A, Karuppiah A. A Survey on Recent Advances in Machine Learning Based Sleep Apnea Detection Systems. Healthcare (Basel) 2021; 9:healthcare9070914. [PMID: 34356293 PMCID: PMC8306425 DOI: 10.3390/healthcare9070914] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Revised: 07/09/2021] [Accepted: 07/13/2021] [Indexed: 11/18/2022] Open
Abstract
Sleep apnea is a sleep disorder that affects a large population. This disorder can cause or augment the exposure to cardiovascular dysfunction, stroke, diabetes, and poor productivity. The polysomnography (PSG) test, which is the gold standard for sleep apnea detection, is expensive, inconvenient, and unavailable to the population at large. This calls for more friendly and accessible solutions for diagnosing sleep apnea. In this paper, we examine how sleep apnea is detected clinically, and how a combination of advances in embedded systems and machine learning can help make its diagnosis easier, more affordable, and accessible. We present the relevance of machine learning in sleep apnea detection, and a study of the recent advances in the aforementioned area. The review covers research based on machine learning, deep learning, and sensor fusion, and focuses on the following facets of sleep apnea detection: (i) type of sensors used for data collection, (ii) feature engineering approaches applied on the data (iii) classifiers used for sleep apnea detection/classification. We also analyze the challenges in the design of sleep apnea detection systems, based on the literature survey.
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Affiliation(s)
- Anita Ramachandran
- Department of Computer Science & Information Systems, BITS, Pilani 560001, India
- Correspondence:
| | - Anupama Karuppiah
- Department of Electrical & Electronics Engineering, BITS, Pilani-K K Birla Goa Campus, Near NH17B, Zuari Nagar, Sancoale 403726, India;
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41
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Newman JL, Phillips JS, Cox SJ. Detecting positional vertigo using an ensemble of 2D convolutional neural networks. Biomed Signal Process Control 2021; 68:102708. [PMID: 34276807 PMCID: PMC8261823 DOI: 10.1016/j.bspc.2021.102708] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2021] [Revised: 04/04/2021] [Accepted: 04/28/2021] [Indexed: 11/18/2022]
Abstract
We trained Deep Neural Networks to detect attacks of motion provoked dizziness. 2D Convolutional Deep Neural Networks outperform 1D network architectures. Best results were provided by input features combining eye- and head-movement. An ensemble of five networks outperformed each individual network alone.
The aim of the work presented here was to develop a system that can automatically identify attacks of dizziness occurring in patients suffering from positional vertigo, which occurs when sufferers move their head into certain positions. We used our novel medical device, CAVA, to record eye- and head-movement data continually for up to 30 days in patients diagnosed with a disorder called Benign Paroxysmal Positional Vertigo. Building upon our previous work, we describe a novel ensemble of five 2D Convolutional Neural Networks, using composite recognition features, including eye-movement data and three-channel accelerometer data. We achieve an F1 score of 0.63 across an 11-fold cross-fold validation experiment, demonstrating that the system can detect a few seconds of motion provoked dizziness from within over a 100 h of normal eye-movement data. We show that the system outperforms our previous 1D Neural Network approach, and that our ensemble classifier is superior to each of the individual networks it contains. We also demonstrate that our composite recognition features provide improved performance over results obtained using the individual data sources independently.
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Affiliation(s)
- Jacob L. Newman
- The School of Computing Sciences, University of East Anglia, Norwich NR4 7TJ, United Kingdom
- Corresponding author.
| | - John S. Phillips
- The Department of Ear, Nose, and Throat Surgery, Norfolk & Norwich University Hospitals NHS Foundation Trust, Norwich NR4 7UY, United Kingdom
| | - Stephen J. Cox
- The School of Computing Sciences, University of East Anglia, Norwich NR4 7TJ, United Kingdom
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Wu Y, Pang X, Zhao G, Yue H, Lei W, Wang Y. A novel approach to diagnose sleep apnea using enhanced frequency extraction network. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2021; 206:106119. [PMID: 33979754 DOI: 10.1016/j.cmpb.2021.106119] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2021] [Accepted: 04/14/2021] [Indexed: 06/12/2023]
Abstract
Sleep apnea-hypopnea syndrome (SAHS), as a widespread respiratory sleep disorder, if left untreated, can lead to a series of pathological changes. By using Polysomnography (PSG), traditional SAHS diagnosis tends to be complex and costly. Nasal airflow (NA) is the most direct reflection of the severity of SAHS. Therefore, we try to take advantage of NA signals that can be easily recorded by wearable devices. In this paper, we present an automatic detection approach of SAH events based on single-channel signal. Through this approach, an enhanced frequency extraction network is designed, which factorizes the mixed feature maps by their frequencies. And the spatial resolution of low-frequency components is reduced so as to save spending. Besides, in our research, the vanilla convolution block of the high-frequency components are replaced by residual blocks and smaller groups of filters with bigger size kernels. And we use the spatial attention module to facilitate feature extraction. Compared with state-of-the-art networks in this field, the promising results reveal that the proposed network for SAH events multiclass classification shows outstanding performance with accuracy of 91.23%, sensitivity of 90.81% and specificity of 90.59%. Thus, we believe that our approach, as a low-cost and high-efficiency solution, shows a great potential for detecting SAH events.
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Affiliation(s)
- Yitao Wu
- School of Computer Science, South China Normal University, Guangzhou, China
| | - Xiongwen Pang
- School of Computer Science, South China Normal University, Guangzhou, China.
| | - Gansen Zhao
- School of Computer Science, South China Normal University, Guangzhou, China
| | - Huijun Yue
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China
| | - Wenbin Lei
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China
| | - Yongquan Wang
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China
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Nasifoglu H, Erogul O. Obstructive sleep apnea prediction from electrocardiogram scalograms and spectrograms using convolutional neural networks. Physiol Meas 2021; 42. [PMID: 34116519 DOI: 10.1088/1361-6579/ac0a9c] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2021] [Accepted: 06/11/2021] [Indexed: 11/12/2022]
Abstract
Objective.In this study, we conducted a comparative analysis of deep convolutional neural network (CNN) models in predicting obstructive sleep apnea (OSA) using electrocardiograms. Unlike other studies in the literature, this study automatically extracts time-frequency features by using CNNs instead of manual feature extraction from ECG recordings.Approach.The proposed model generates scalogram and spectrogram representations by transforming preprocessed 30 s ECG segments from time domain to the frequency domain using continuous wavelet transform and short time Fourier transform, respectively. We examined AlexNet, GoogleNet and ResNet18 models in predicting OSA events. The effect of transfer learning on success is also investigated. Based on the observed results, we proposed a new model that is found more effective in estimation. In total, 152 ECG recordings were included in the study for training and evaluation of the models.Main results.The prediction using scalograms immediately 30 s before potential OSA onsets gave the best performance with 82.30% accuracy, 83.22% sensitivity, 82.27% specificity and 82.95% positive predictive value. The prediction using spectrograms also achieved up to 80.13% accuracy and 81.99% sensitivity on prediction. Per-recording classification suggested considerable results with 91.93% accuracy for prediction of OSA events.Significance.Time-frequency deep features of scalograms and spectrograms of ECG segments prior to OSA events provided reliable information about the possible events in the future. The proposed CNN model can be used as a good indicator to accurately predict OSA events using ECG recordings.
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Affiliation(s)
- Huseyin Nasifoglu
- Department of Biomedical Engineering, TOBB University of Economics and Technology, Ankara 06560, Turkey
| | - Osman Erogul
- Department of Biomedical Engineering, TOBB University of Economics and Technology, Ankara 06560, Turkey
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Sun JY, Shen H, Qu Q, Sun W, Kong XQ. The application of deep learning in electrocardiogram: Where we came from and where we should go? Int J Cardiol 2021; 337:71-78. [PMID: 34000355 DOI: 10.1016/j.ijcard.2021.05.017] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Revised: 04/22/2021] [Accepted: 05/10/2021] [Indexed: 12/16/2022]
Abstract
Electrocardiogram (ECG) is a commonly-used, non-invasive examination recording cardiac voltage versus time traces over a period. Deep learning technology, a robust artificial intelligence algorithm, can imitate the data processing patterns of the human brain, and it has experienced remarkable success in disease screening, diagnosis, and prediction. Compared with traditional machine learning, deep learning algorithms possess more powerful learning capabilities and can automatically extract features without extensive data pre-processing or hand-crafted feature extraction, which makes it a suitable tool to analyze complex structures of high-dimensional data. With the advances in computing power and digitized data availability, deep learning provides us an opportunity to improve ECG data interpretation with higher efficacy and accuracy and, more importantly, expand the original functions of ECG. The application of deep learning has led us to stand at the edge of ECG innovation and will potentially change the current clinical monitoring and management strategies. In this review, we introduce deep learning technology and summarize its advantages compared with traditional machine learning algorithms. Moreover, we provide an overview on the current application of deep learning in ECGs, with a focus on arrhythmia (especially atrial fibrillation during normal sinus rhythm), cardiac dysfunction, electrolyte imbalance, and sleep apnea. Last but not least, we discuss the current challenges and prospect directions for the following studies.
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Affiliation(s)
- Jin-Yu Sun
- Department of Cardiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210000, China
| | - Hui Shen
- Department of Cardiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210000, China
| | - Qiang Qu
- Department of Cardiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210000, China
| | - Wei Sun
- Department of Cardiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210000, China..
| | - Xiang-Qing Kong
- Department of Cardiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210000, China..
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Fu Z, Hong S, Zhang R, Du S. Artificial-Intelligence-Enhanced Mobile System for Cardiovascular Health Management. SENSORS 2021; 21:s21030773. [PMID: 33498892 PMCID: PMC7865877 DOI: 10.3390/s21030773] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 01/19/2021] [Accepted: 01/20/2021] [Indexed: 12/25/2022]
Abstract
The number of patients with cardiovascular diseases is rapidly increasing in the world. The workload of existing clinicians is consequently increasing. However, the number of cardiovascular clinicians is declining. In this paper, we aim to design a mobile and automatic system to improve the abilities of patients’ cardiovascular health management while also reducing clinicians’ workload. Our system includes both hardware and cloud software devices based on recent advances in Internet of Things (IoT) and Artificial Intelligence (AI) technologies. A small hardware device was designed to collect high-quality Electrocardiogram (ECG) data from the human body. A novel deep-learning-based cloud service was developed and deployed to achieve automatic and accurate cardiovascular disease detection. Twenty types of diagnostic items including sinus rhythm, tachyarrhythmia, and bradyarrhythmia are supported. Experimental results show the effectiveness of our system. Our hardware device can guarantee high-quality ECG data by removing high-/low-frequency distortion and reverse lead detection with 0.9011 Area Under the Receiver Operating Characteristic Curve (ROC–AUC) score. Our deep-learning-based cloud service supports 20 types of diagnostic items, 17 of them have more than 0.98 ROC–AUC score. For a real world application, the system has been used by around 20,000 users in twenty provinces throughout China. As a consequence, using this service, we could achieve both active and passive health management through a lightweight mobile application on the WeChat Mini Program platform. We believe that it can have a broader impact on cardiovascular health management in the world.
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Affiliation(s)
- Zhaoji Fu
- School of Management, University of Science and Technology of China, Hefei 230026, China; (Z.F.); (S.D.)
- HeartVoice Medical Technology, Hefei 230027, China
| | - Shenda Hong
- National Institute of Health Data Science at Peking University, Peking University, Beijing 100191, China
- Institute of Medical Technology, Health Science Center of Peking University, Beijing 100191, China
- Correspondence:
| | - Rui Zhang
- Division of Life Science and Medicine, University of Science and Technology of China, Hefei 230026, China;
| | - Shaofu Du
- School of Management, University of Science and Technology of China, Hefei 230026, China; (Z.F.); (S.D.)
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Chen S, Chen L, Zhang X, Yang Z. Screening of cardiac disease based on integrated modeling of heart rate variability. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2020.102147] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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Yue H, Lin Y, Wu Y, Wang Y, Li Y, Guo X, Huang Y, Wen W, Zhao G, Pang X, Lei W. Deep Learning for Diagnosis and Classification of Obstructive Sleep Apnea: A Nasal Airflow-Based Multi-Resolution Residual Network. Nat Sci Sleep 2021; 13:361-373. [PMID: 33737850 PMCID: PMC7966385 DOI: 10.2147/nss.s297856] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Accepted: 02/19/2021] [Indexed: 12/17/2022] Open
Abstract
PURPOSE This study evaluated a novel approach for diagnosis and classification of obstructive sleep apnea (OSA), called Obstructive Sleep Apnea Smart System (OSASS), using residual networks and single-channel nasal pressure airflow signals. METHODS Data were collected from the sleep center of the First Affiliated Hospital, Sun Yat-sen University, and the Integrative Department of Guangdong Province Traditional Chinese Medical Hospital. We developed a new model called the multi-resolution residual network (Mr-ResNet) based on a residual network to detect nasal pressure airflow signals recorded by polysomnography (PSG) automatically. The performance of the model was assessed by its sensitivity, specificity, accuracy, and F1-score. We built OSASS based on Mr-ResNet to estimate the apnea‒hypopnea index (AHI) and to classify the severity of OSA, and compared the agreement between OSASS output and the registered polysomnographic technologist (RPSGT) score, assessed by two technologists. RESULTS In the primary test set, the sensitivity, specificity, accuracy, and F1-score of Mr-ResNet were 90.8%, 90.5%, 91.2%, and 90.5%, respectively. In the independent test set, the Spearman correlation for AHI between OSASS and the RPSGT score determined by two technologists was 0.94 (p < 0.001) and 0.96 (p < 0.001), respectively. Cohen's Kappa scores for classification between OSASS and the two technologists' scores were 0.81 and 0.84, respectively. CONCLUSION Our results indicated that OSASS can automatically diagnose and classify OSA using signals from a single-channel nasal pressure airflow, which is consistent with polysomnographic technologists' findings. Thus, OSASS holds promise for clinical application.
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Affiliation(s)
- Huijun Yue
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Yu Lin
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Yitao Wu
- School of Computer Science, South China Normal University, Guangzhou, 510631, People's Republic of China
| | - Yongquan Wang
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Yun Li
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Xueqin Guo
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Ying Huang
- Guangdong Province Traditional Chinese Medical Hospital, Guangzhou, 510000, People's Republic of China
| | - Weiping Wen
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
| | - Gansen Zhao
- School of Computer Science, South China Normal University, Guangzhou, 510631, People's Republic of China
| | - Xiongwen Pang
- School of Computer Science, South China Normal University, Guangzhou, 510631, People's Republic of China
| | - Wenbin Lei
- Otorhinolaryngology Hospital, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, People's Republic of China
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Leino A, Nikkonen S, Kainulainen S, Korkalainen H, Töyräs J, Myllymaa S, Leppänen T, Ylä-Herttuala S, Westeren-Punnonen S, Muraja-Murro A, Jäkälä P, Mervaala E, Myllymaa K. Neural network analysis of nocturnal SpO 2 signal enables easy screening of sleep apnea in patients with acute cerebrovascular disease. Sleep Med 2020; 79:71-78. [PMID: 33482455 DOI: 10.1016/j.sleep.2020.12.032] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/03/2020] [Revised: 12/16/2020] [Accepted: 12/28/2020] [Indexed: 10/22/2022]
Abstract
Current diagnostics of sleep apnea relies on the time-consuming manual analysis of complex sleep registrations, which is impractical for routine screening in hospitalized patients with a high probability for sleep apnea, e.g. those experiencing acute stroke or transient ischemic attacks (TIA). To overcome this shortcoming, we aimed to develop a convolutional neural network (CNN) capable of estimating the severity of sleep apnea in acute stroke and TIA patients based solely on the nocturnal oxygen saturation (SpO2) signal. The CNN was trained with SpO2 signals derived from 1379 home sleep apnea tests (HSAT) of suspected sleep apnea patients and tested with SpO2 signals of 77 acute ischemic stroke or TIA patients. The CNN's performance was tested by comparing the estimated respiratory event index (REI) and oxygen desaturation index (ODI) with manually obtained values. Median estimation errors for REI and ODI in patients with stroke or TIA were 1.45 events/hour and 0.61 events/hour, respectively. Furthermore, based on estimated REI and ODI, 77.9% and 88.3% of these patients were classified into the correct sleep apnea severity categories. The sensitivity and specificity to identify sleep apnea (REI > 5 events/hour) were 91.8% and 78.6%, respectively. Moderate-to-severe sleep apnea was detected (REI > 15 events/hour) with sensitivity of 92.3% and specificity of 96.1%. The CNN analysis of the SpO2 signal has great potential as a simple screening tool for sleep apnea. This novel automatic method accurately detects sleep apnea in acute cerebrovascular disease patients and facilitates their referral for a differential diagnostic HSAT or polysomnography evaluation.
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Affiliation(s)
- Akseli Leino
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland; Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
| | - Sami Nikkonen
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland; Department of Applied Physics, University of Eastern Finland, Kuopio, Finland
| | - Samu Kainulainen
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland; Department of Applied Physics, University of Eastern Finland, Kuopio, Finland
| | - Henri Korkalainen
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland; Department of Applied Physics, University of Eastern Finland, Kuopio, Finland
| | - Juha Töyräs
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland; Department of Applied Physics, University of Eastern Finland, Kuopio, Finland; School of Information Technology and Electrical Engineering, The University of Queensland, Brisbane, Australia
| | - Sami Myllymaa
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland; Department of Applied Physics, University of Eastern Finland, Kuopio, Finland
| | - Timo Leppänen
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland; Department of Applied Physics, University of Eastern Finland, Kuopio, Finland
| | - Salla Ylä-Herttuala
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland
| | - Susanna Westeren-Punnonen
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland
| | - Anu Muraja-Murro
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland
| | - Pekka Jäkälä
- Department of Neurology, NeuroCenter, Kuopio University Hospital, Kuopio, Finland; Department of Neurology, University of Eastern Finland, Kuopio, Finland
| | - Esa Mervaala
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland; Department of Clinical Neurophysiology, University of Eastern Finland, Kuopio, Finland
| | - Katja Myllymaa
- Department of Clinical Neurophysiology, Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland; Department of Applied Physics, University of Eastern Finland, Kuopio, Finland
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Li X, Lu R, Wang Q, Wang J, Duan X, Sun Y, Li X, Zhou Y. One-dimensional convolutional neural network (1D-CNN) image reconstruction for electrical impedance tomography. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2020; 91:124704. [PMID: 33380008 DOI: 10.1063/5.0025881] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2020] [Accepted: 11/04/2020] [Indexed: 06/12/2023]
Abstract
In recent years, due to the strong autonomous learning ability of neural network algorithms, they have been applied for electrical impedance tomography (EIT). Although their imaging accuracy is greatly improved compared with traditional algorithms, generalization for both simulation and experimental data is required to be improved. According to the characteristics of voltage data collected in EIT, a one-dimensional convolutional neural network (1D-CNN) is proposed to solve the inverse problem of image reconstruction. Abundant samples are generated with numerical simulation to improve the edge-preservation of reconstructed images. The TensorFlow-graphics processing unit environment and Adam optimizer are used to train and optimize the network, respectively. The reconstruction results of the new network are compared with the Deep Neural Network (DNN) and 2D-CNN to prove the effectiveness and edge-preservation. The anti-noise and generalization capabilities of the new network are also validated. Furthermore, experiments with the EIT system are carried out to verify the practicability of the new network. The average image correlation coefficient of the new network increases 0.0320 and 0.0616 compared with the DNN and 2D-CNN, respectively, which demonstrates that the proposed method could give better reconstruction results, especially for the distribution of complex geometries.
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Affiliation(s)
- Xiuyan Li
- School of Electronics and Information Engineering, Tianjin Key Laboratory of Optoelectronic Detection Technology and Systems, Tianjin Polytechnic University, Tianjin 300387, China
| | - Rengui Lu
- School of Electronics and Information Engineering, Tianjin Key Laboratory of Optoelectronic Detection Technology and Systems, Tianjin Polytechnic University, Tianjin 300387, China
| | - Qi Wang
- School of Life Science, Tianjin Polytechnic University, Tianjin 300387, China
| | - Jianming Wang
- School of Electronics and Information Engineering, Tianjin Key Laboratory of Optoelectronic Detection Technology and Systems, Tianjin Polytechnic University, Tianjin 300387, China
| | - Xiaojie Duan
- School of Electronics and Information Engineering, Tianjin Key Laboratory of Optoelectronic Detection Technology and Systems, Tianjin Polytechnic University, Tianjin 300387, China
| | - Yukuan Sun
- School of Electronics and Information Engineering, Tianjin Key Laboratory of Optoelectronic Detection Technology and Systems, Tianjin Polytechnic University, Tianjin 300387, China
| | - Xiaojie Li
- School of Life Science, Tianjin Polytechnic University, Tianjin 300387, China
| | - Yong Zhou
- School of Electronics and Information Engineering, Tianjin Key Laboratory of Optoelectronic Detection Technology and Systems, Tianjin Polytechnic University, Tianjin 300387, China
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Detection of Abnormal Respiratory Events with Single Channel ECG and Hybrid Machine Learning Model in Patients with Obstructive Sleep Apnea. Ing Rech Biomed 2020. [DOI: 10.1016/j.irbm.2020.05.006] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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