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Ribeiro J, Luís MÂ, Rodrigues B, Santos FM, Mesquita J, Boto R, Tomaz CT. Cryogels and Monoliths: Promising Tools for Chromatographic Purification of Nucleic Acids. Gels 2024; 10:198. [PMID: 38534616 DOI: 10.3390/gels10030198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2024] [Revised: 03/09/2024] [Accepted: 03/11/2024] [Indexed: 03/28/2024] Open
Abstract
The increasing demand for highly pure biopharmaceuticals has put significant pressure on the biotechnological industry to innovate in production and purification processes. Nucleic acid purification, crucial for gene therapy and vaccine production, presents challenges due to the unique physical and chemical properties of these molecules. Meeting regulatory standards necessitates large quantities of biotherapeutic agents of high purity. While conventional chromatography offers versatility and efficiency, it suffers from drawbacks like low flow rates and binding capacity, as well as high mass transfer resistance. Recent advancements in continuous beds, including monoliths and cryogel-based systems, have emerged as promising solutions to overcome these limitations. This review explores and evaluates the latest progress in chromatography utilizing monolithic and cryogenic supports for nucleic acid purification.
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Affiliation(s)
- João Ribeiro
- CICS-UBI-Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
- Department of Chemistry, University of Beira Interior, Rua Marquês de Ávila e Bolama, 6201-001 Covilhã, Portugal
| | - Marco  Luís
- CICS-UBI-Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
- Department of Chemistry, University of Beira Interior, Rua Marquês de Ávila e Bolama, 6201-001 Covilhã, Portugal
| | - Bruno Rodrigues
- CICS-UBI-Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
- Department of Chemistry, University of Beira Interior, Rua Marquês de Ávila e Bolama, 6201-001 Covilhã, Portugal
| | - Fátima Milhano Santos
- Functional Proteomics Laboratory, Centro Nacional de Biotecnología, Consejo Superior de Investigaciones Científicas (CSIC), Calle Darwin 3, Campus de Cantoblanco, 28049 Madrid, Spain
| | - Joana Mesquita
- CICS-UBI-Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
| | - Renato Boto
- CICS-UBI-Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
- Department of Chemistry, University of Beira Interior, Rua Marquês de Ávila e Bolama, 6201-001 Covilhã, Portugal
| | - Cândida Teixeira Tomaz
- CICS-UBI-Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
- Department of Chemistry, University of Beira Interior, Rua Marquês de Ávila e Bolama, 6201-001 Covilhã, Portugal
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Applications of Cryostructures in the Chromatographic Separation of Biomacromolecules. J Chromatogr A 2022; 1683:463546. [DOI: 10.1016/j.chroma.2022.463546] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2022] [Revised: 09/05/2022] [Accepted: 09/29/2022] [Indexed: 12/20/2022]
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Üzek R, Şenel S, Denizli A. Investigation of Thermodynamic, Kinetic, and Isothermal Parameters for the Selective Adsorption of Bisphenol A. ACS OMEGA 2022; 7:18940-18952. [PMID: 35694526 PMCID: PMC9178953 DOI: 10.1021/acsomega.2c01975] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Accepted: 05/12/2022] [Indexed: 06/15/2023]
Abstract
Herein, a novel imprinted solid-phase extraction cartridge was fabricated to investigate the kinetic, thermodynamic, and isothermal parameters for the selective adsorption of Bisphenol A (BPA). The imprinted polymeric cartridges (BMC) for the BPA adsorption were fabricated in the presence of a template and functional monomer using the in situ polymerization technique. To prove the efficiency and selectivity of BMC, the nonimprinted polymeric cartridges (BNC) and the empty polymeric cartridges (EC) were also fabricated with and without functional monomer using the same manner for the preparation of BMC. The characterization of cartridges was performed by elemental analysis, Fourier transform infrared (FTIR) spectroscopy, scanning electron microscopy (SEM), Brunauer-Emmett-Teller (BET) surface area measurements, and swelling tests. BPA removal studies were performed by analyzing some parameters such as temperature, BPA concentration, flow rate, salt type, and concentration. The highest capacity was determined as 103.2 mg BPA/g polymer for a 0.75 mL/min flow rate of 0.75 M (NH4)2SO4 containing 200 mg/L BPA solution at 50 °C. NaOH (1.0 M) was used as a desorption agent. The reusability performance was examined by performing 10 consecutive cycles. The solid-phase extraction (SPE) performance was also checked to determine the enrichment and extraction recovery factors for tap water and synthetic wastewater samples. Temkin, Langmuir, Freundlich, and Dubinin-Radushkevich isotherm models were applied to BPA adsorption data examining the adsorption mechanism, surface properties, and adsorption degree. The most suitable isotherm model for BPA adsorption was determined as the Langmuir isotherm model. The thermodynamic parameters (ΔG°, ΔH°, and ΔS°) were investigated to reveal the thermodynamics of adsorption. Adsorption thermodynamic parameters (ΔH°, ΔS°, and ΔG°) were calculated using the thermodynamic equilibrium constant (thermodynamic equilibrium constant, K°) values that change with temperature. It was determined that BPA adsorption was spontaneous (ΔG° < 0) and endothermic (ΔH° > 0) and entropy increased (ΔS° > 0) at the temperatures studied in the BPA adsorption process. The rate control step in the adsorption process was examined by applying pseudo-first-order and pseudo-second-order kinetic models to the adsorption data for the investigations of BPA adsorption kinetics, and the pseudo-second-order kinetic model was found to be more suitable for describing BPA adsorption kinetics. In examining the selectivity of cartridges, structural analogues of hydroquinone, phenol, β-estradiol, and 8-hydroxyquinoline were tested.
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Thakar H, Sebastian SM, Mandal S, Pople A, Agarwal G, Srivastava A. Biomolecule-Conjugated Macroporous Hydrogels for Biomedical Applications. ACS Biomater Sci Eng 2019; 5:6320-6341. [DOI: 10.1021/acsbiomaterials.9b00778] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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Özgün Köse S, Öziç C, Yılmaz F, Ersöz A, Say R. DNA ligase photocrosslinked cryogenic column based biotinylation kit for viral hybridization and detection. Process Biochem 2019. [DOI: 10.1016/j.procbio.2019.06.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Memic A, Colombani T, Eggermont LJ, Rezaeeyazdi M, Steingold J, Rogers ZJ, Navare KJ, Mohammed HS, Bencherif SA. Latest Advances in Cryogel Technology for Biomedical Applications. ADVANCED THERAPEUTICS 2019. [DOI: 10.1002/adtp.201800114] [Citation(s) in RCA: 170] [Impact Index Per Article: 28.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Adnan Memic
- Center of NanotechnologyKing Abdulaziz University Jeddah 21589 Saudi Arabia
- Center for Biomedical EngineeringDepartment of MedicineBrigham and Women's HospitalHarvard Medical School Cambridge MA 02139 USA
- Department of Chemical EngineeringNortheastern University Boston MA 02115 USA
| | - Thibault Colombani
- Department of Chemical EngineeringNortheastern University Boston MA 02115 USA
| | - Loek J. Eggermont
- Department of Chemical EngineeringNortheastern University Boston MA 02115 USA
- Department of Tumor ImmunologyOncode Institute, Radboud Institute for Molecular Life SciencesRadboud University Medical Center Nijmegen 6500 The Netherlands
| | | | - Joseph Steingold
- Department of Pharmaceutical SciencesNortheastern University Boston MA 02115 USA
| | - Zach J. Rogers
- Department of Chemical EngineeringNortheastern University Boston MA 02115 USA
| | | | | | - Sidi A. Bencherif
- Department of Chemical EngineeringNortheastern University Boston MA 02115 USA
- Department of BioengineeringNortheastern University Boston MA 02115 USA
- Harvard John A. Paulson School of Engineering and Applied SciencesHarvard University Cambridge MA 02138 USA
- Sorbonne UniversityUTC CNRS UMR 7338Biomechanics and Bioengineering (BMBI)University of Technology of Compiègne Compiègne 60159 France
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Demir EF, Özçalışkan E, Karakaş H, Uygun M, Aktaş Uygun D, Akgöl S, Denizli A. Synthesis and characterization of albumin imprinted polymeric hydrogel membranes for proteomic studies. JOURNAL OF BIOMATERIALS SCIENCE-POLYMER EDITION 2018; 29:2218-2236. [PMID: 30303463 DOI: 10.1080/09205063.2018.1534423] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
In this presented study, a novel molecularly imprinted polymeric hydrogel membranes (PHMs) were developed to use for the albumin depletion studies. For this, albumin imprinted poly(2-hydroxyethyl methacrylate-N-methacryloyl-(L)-phenylalanine methyl ester) polymeric hydrogel membranes [p(HEMA-MAP) PHMs] were synthesized by the photopolymerization technique, and then characterized by SEM, EDX, FT-IR and swelling studies. Synthesized PHMs had spherical structure and the MAP monomer incorporation onto the PHMs was determined by EDX analysis by using nitrogen stoichiometry. Also, the swelling ratio of the albumin imprinted p(HEMA-MAP) PHMs was determined as 215%. The optimum albumin adsorption condition (adsorption capacity, medium pH, adsorption rate, temperature, ionic strength) were studied and the maximum albumin adsorption capacity was found to be as 34.28 mg/g PHMs. Selectivity experiments were also carried out with the presence of the competitive proteins such as lysozyme and amylase, and the results demonstrated that the albumin imprinted p(HEMA-MAP) PHMs showed high affinity towards the BSA molecules than the competitive proteins of lysozyme and amylase. Adsorbed albumin was desorbed from the PHMs by 1.0 M of NaCl, and the reusability of the imprinted PHMs was also demonstrated for five successive adsorption-desorption cycles without any significant loss in the albumin adsorption capacity. As an application, sodium-dodecyl sulfate polyacrylamide gel electrophoresis was used to indicate the albumin depletion efficiency of albumin imprinted p(HEMA-MAP) PHMs. This presented study showed that, these imprinted membranes are promising for proteomic studies and applications, and can be used for the investigations for human diagnostics.
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Affiliation(s)
- Esra Feyzioğlu Demir
- a Vocational School of Health Services, Department of Medical Laboratory Techniques , Izmir University of Economics , Izmir , Turkey
| | - Emir Özçalışkan
- b Faculty of Science, Department of Biochemistry , Ege University , Izmir , Turkey
| | - Hayriye Karakaş
- b Faculty of Science, Department of Biochemistry , Ege University , Izmir , Turkey
| | - Murat Uygun
- c Faculty of Science and Arts, Chemistry Division , Adnan Menderes University , Aydın , Turkey.,d Adnan Menderes University, Nanotechnology Application and Research Center , Aydın , Turkey
| | - Deniz Aktaş Uygun
- c Faculty of Science and Arts, Chemistry Division , Adnan Menderes University , Aydın , Turkey.,d Adnan Menderes University, Nanotechnology Application and Research Center , Aydın , Turkey
| | - Sinan Akgöl
- b Faculty of Science, Department of Biochemistry , Ege University , Izmir , Turkey
| | - Adil Denizli
- e Department of Chemistry , Hacettepe University Faculty of Science , Ankara , Turkey
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Lin KN, Grandhi TSP, Goklany S, Rege K. Chemotherapeutic Drug-Conjugated Microbeads Demonstrate Preferential Binding to Methylated Plasmid DNA. Biotechnol J 2018; 13:e1700701. [DOI: 10.1002/biot.201700701] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2017] [Revised: 03/25/2018] [Indexed: 11/08/2022]
Affiliation(s)
- Kevin N. Lin
- Chemical Engineering, School for Engineering of Matter, Transport, and Energy, Arizona State University; Tempe AZ 85287 USA
| | - Taraka Sai Pavan Grandhi
- Biomedical Engineering, School of Biological and Health Systems Engineering, Arizona State University; Tempe AZ 85287 USA
| | - Sheba Goklany
- Chemical Engineering, School for Engineering of Matter, Transport, and Energy, Arizona State University; Tempe AZ 85287 USA
| | - Kaushal Rege
- Chemical Engineering, School for Engineering of Matter, Transport, and Energy, Arizona State University; Tempe AZ 85287 USA
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Santos T, Brito A, Boto R, Sousa P, Almeida P, Cruz C, Tomaz C. Influenza DNA vaccine purification using pHEMA cryogel support. Sep Purif Technol 2018. [DOI: 10.1016/j.seppur.2018.06.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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10
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Yılmaz E, Garipcan B, Patra HK, Uzun L. Molecular Imprinting Applications in Forensic Science. SENSORS 2017; 17:s17040691. [PMID: 28350333 PMCID: PMC5419804 DOI: 10.3390/s17040691] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/16/2017] [Revised: 03/21/2017] [Accepted: 03/23/2017] [Indexed: 01/04/2023]
Abstract
Producing molecular imprinting-based materials has received increasing attention due to recognition selectivity, stability, cast effectiveness, and ease of production in various forms for a wide range of applications. The molecular imprinting technique has a variety of applications in the areas of the food industry, environmental monitoring, and medicine for diverse purposes like sample pretreatment, sensing, and separation/purification. A versatile usage, stability and recognition capabilities also make them perfect candidates for use in forensic sciences. Forensic science is a demanding area and there is a growing interest in molecularly imprinted polymers (MIPs) in this field. In this review, recent molecular imprinting applications in the related areas of forensic sciences are discussed while considering the literature of last two decades. Not only direct forensic applications but also studies of possible forensic value were taken into account like illicit drugs, banned sport drugs, effective toxins and chemical warfare agents in a review of over 100 articles. The literature was classified according to targets, material shapes, production strategies, detection method, and instrumentation. We aimed to summarize the current applications of MIPs in forensic science and put forth a projection of their potential uses as promising alternatives for benchmark competitors.
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Affiliation(s)
- Erkut Yılmaz
- Department of Biotechnology and Molecular Biology, Aksaray University, 68100 Aksaray, Turkey.
| | - Bora Garipcan
- Institute of Biomedical Engineering, Bogazici University, 34684 Istanbul, Turkey.
| | - Hirak K Patra
- Department of Clinical and Experimental Medicine, Linkoping University, 58225 Linköping, Sweden.
| | - Lokman Uzun
- Department of Chemistry, Hacettepe University, 06381 Ankara, Turkey.
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Dursun EM, Üzek R, Bereli N, Şenel S, Denizli A. Synthesis of novel monolithic cartridges with specific recognition sites for extraction of melamine. REACT FUNCT POLYM 2016. [DOI: 10.1016/j.reactfunctpolym.2016.09.002] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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12
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Synthesis and characterization of cryogel structures for isolation of EPSs from Botryococcus braunii. Carbohydr Polym 2016; 150:378-84. [DOI: 10.1016/j.carbpol.2016.05.027] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2016] [Revised: 05/03/2016] [Accepted: 05/10/2016] [Indexed: 12/29/2022]
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Erol K, Köse K, Uzun L, Say R, Denizli A. Polyethyleneimine assisted-two-step polymerization to develop surface imprinted cryogels for lysozyme purification. Colloids Surf B Biointerfaces 2016; 146:567-76. [DOI: 10.1016/j.colsurfb.2016.06.060] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2016] [Revised: 06/21/2016] [Accepted: 06/28/2016] [Indexed: 11/16/2022]
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Köse K, Erol K, Özgür E, Uzun L, Denizli A. PolyAdenine cryogels for fast and effective RNA purification. Colloids Surf B Biointerfaces 2016; 146:678-86. [PMID: 27434154 DOI: 10.1016/j.colsurfb.2016.07.003] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2016] [Revised: 06/24/2016] [Accepted: 07/02/2016] [Indexed: 11/26/2022]
Abstract
Cryogels are used effectively for many diverse applications in a variety of fields. The isolation or purification of RNA, one of the potential utilizations for cryogels, is crucial due to their vital roles such as encoding, decoding, transcription and translation, and gene expression. RNA principally exists within every living thing, but their tendency to denaturation easily is still the most challenging issue. Herein, we aimed to develop adenine incorporated polymeric cryogels as an alternative sorbent for cost-friendly and fast RNA purification with high capacity. For this goal, we synthesized the polymerizable derivative of adenine called as adenine methacrylate (AdeM) through the substitution reaction between adenine and methacryloyl chloride. Then, 2-hydroxyethyl methacrylate (HEMA)-based cryogels were prepared in a partially frozen aqueous medium by copolymerization of monomers, AdeM, and HEMA. The cryogels were characterized by using Fourier transform infrared spectroscopy (FTIR), scanning electron microscopy (SEM), surface area measurements, thermogravimetric analysis (TGA), and swelling tests. RNA adsorption experiments were performed via batch system while varying different conditions including pH, initial RNA concentration, temperature, and interaction time. We achieved high RNA adsorption capacity of cryogels, with the swelling ratio around 510%, as 11.86mg/g. The cryogels might be reused at least five times without significant decrease in adsorption capacity.
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Affiliation(s)
- Kazım Köse
- Hacettepe University, Department of Chemistry, Ankara, Turkey; Hitit University, Scientific Technical Research and Application Center, Çorum, Turkey
| | - Kadir Erol
- Hacettepe University, Department of Chemistry, Ankara, Turkey; Hitit University, Department of Chemistry, Çorum, Turkey
| | - Erdoğan Özgür
- Hacettepe University, Department of Chemistry, Ankara, Turkey
| | - Lokman Uzun
- Hacettepe University, Department of Chemistry, Ankara, Turkey.
| | - Adil Denizli
- Hacettepe University, Department of Chemistry, Ankara, Turkey
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Andaç M, Galaev IY, Denizli A. Affinity based and molecularly imprinted cryogels: Applications in biomacromolecule purification. J Chromatogr B Analyt Technol Biomed Life Sci 2016; 1021:69-80. [DOI: 10.1016/j.jchromb.2015.09.034] [Citation(s) in RCA: 54] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2015] [Revised: 09/15/2015] [Accepted: 09/21/2015] [Indexed: 10/23/2022]
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16
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HSA immobilized novel polymeric matrix as an alternative sorbent in hemoperfusion columns for bilirubin removal. REACT FUNCT POLYM 2015. [DOI: 10.1016/j.reactfunctpolym.2015.09.004] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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17
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Dye affinity cryogels for plasmid DNA purification. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2015; 56:318-24. [DOI: 10.1016/j.msec.2015.06.041] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2014] [Revised: 12/11/2014] [Accepted: 06/22/2015] [Indexed: 11/18/2022]
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18
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Göktürk I, Üzek R, Uzun L, Denizli A. Synthesis of a specific monolithic column with artificial recognition sites for L-glutamic acid via cryo-crosslinking of imprinted nanoparticles. ARTIFICIAL CELLS NANOMEDICINE AND BIOTECHNOLOGY 2015; 44:1133-40. [PMID: 25749280 DOI: 10.3109/21691401.2015.1011806] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
In this study, a new molecular imprinting (MIP)-based monolithic cryogel column was prepared using chemically crosslinked molecularly imprinted nanoparticles, to achieve a simplified chromatographic separation (SPE) for a model compound, L-glutamic acid (L-Glu). Cryogelation through crosslinking of imprinted nanoparticles forms stable monolithic cryogel columns. This technique reduces the leakage of nanoparticles and increases the surface area, while protecting the structural features of the cryogel for stable and efficient recognition of the template molecule. A non-imprinted monolithic cryogel column (NIP) was also prepared, using non-imprinted nanoparticles produced without the addition of L-Glu during polymerization. The molecularly imprinted monolithic cryogel column (MIP) indicates apparent recognition selectivity and a good adsorption capacity compared to the NIP. Also, we have achieved a significant increase in the adsorption capacity, using the advantage of high surface area of the nanoparticles.
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Affiliation(s)
- Ilgım Göktürk
- a Nanomedicine and Nanotechnology Division, Hacettepe University , Ankara , Turkey.,b Department of Chemistry , Hacettepe University , Ankara , Turkey
| | - Recep Üzek
- b Department of Chemistry , Hacettepe University , Ankara , Turkey
| | - Lokman Uzun
- b Department of Chemistry , Hacettepe University , Ankara , Turkey
| | - Adil Denizli
- b Department of Chemistry , Hacettepe University , Ankara , Turkey
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Comparison of Two Different Reactive Dye Immobilized Poly(Hydroxyethyl Methacrylate) Cryogel Discs for Purification of Lysozyme. Appl Biochem Biotechnol 2015; 175:2795-805. [DOI: 10.1007/s12010-014-1454-5] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2014] [Accepted: 12/15/2014] [Indexed: 01/08/2023]
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Üzek R, Özkara S, Güngüneş H, Uzun L, Şenel S. Magnetic Nanoparticles for Plasmid DNA Purification through Hydrophobic Interaction Chromatography. SEP SCI TECHNOL 2014. [DOI: 10.1080/01496395.2014.905958] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Caramelo-Nunes C, Almeida P, Marcos J, Tomaz C. Aromatic ligands for plasmid deoxyribonucleic acid chromatographic analysis and purification: An overview. J Chromatogr A 2014; 1327:1-13. [DOI: 10.1016/j.chroma.2013.12.057] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2013] [Revised: 12/19/2013] [Accepted: 12/20/2013] [Indexed: 12/25/2022]
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22
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Daoud-Attieh M, Chaib H, Armutcu C, Uzun L, Elkak A, Denizli A. Immunoglobulin G purification from bovine serum with pseudo-specific supermacroporous cryogels. Sep Purif Technol 2013. [DOI: 10.1016/j.seppur.2013.08.026] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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23
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Uzun L, Armutcu C, Biçen Ö, Ersöz A, Say R, Denizli A. Simultaneous depletion of immunoglobulin G and albumin from human plasma using novel monolithic cryogel columns. Colloids Surf B Biointerfaces 2013; 112:1-8. [PMID: 23928053 DOI: 10.1016/j.colsurfb.2013.07.010] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2013] [Revised: 07/01/2013] [Accepted: 07/03/2013] [Indexed: 10/26/2022]
Abstract
In this study, we aimed to develop an alternative matrix able to deplete the albumin (Alb) and immunoglobulin G (IgG) from blood plasma simultaneously to prepare plasma samples for large-scale applications of blood-related proteomics. As a first step, nano-protein A nanoparticles (nanoProA) were prepared and characterized. Subsequently, cibacron blue F3GA (CB) was immobilized onto the nanoProA's to enhance their specific affinity for Alb molecules. Finally, both nanoparticles, specifically, nanoProA and CB-nanoProA, were separately embedded into cryogel structures to combine advantages of the nanoparticles with those of the cryogels. The protein adsorption was optimized using aqueous Alb and IgG solutions separately. Subsequently, competitive protein adsorption was performed using a protein mixture prepared with Alb and IgG adhering to their plasma protein ratios. Because of the CB-immobilization, the Alb depletion performance of the cryogels increased whereas the IgG depleting performance decreased. Using the nanoProA, embedded cryogel removed 99.3% of the IgG, while using the CB-nanoProA embedded cryogel removed 97.5% of the Alb content. The simultaneous depletion performances of the cryogels for Alb and IgG were characterized using sodium dodecyl sulfate-polyacrylamide gel electrophoresis. In this study, the monolithic cryogel-based adsorbents were classified as an alternative matrix to prepare plasma samples for proteomics applications at the preparative scale.
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Affiliation(s)
- Lokman Uzun
- Hacettepe University, Department of Chemistry, Beytepe, Ankara, Turkey.
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Emin Çorman M, Bereli N, Özkara S, Uzun L, Denizli A. Hydrophobic cryogels for DNA adsorption: Effect of embedding of monosize microbeads into cryogel network on their adsorptive performances. Biomed Chromatogr 2013; 27:1524-31. [DOI: 10.1002/bmc.2954] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2013] [Revised: 05/07/2013] [Accepted: 05/07/2013] [Indexed: 11/09/2022]
Affiliation(s)
- M. Emin Çorman
- Hacettepe University; Chemistry Department; Ankara; Turkey
| | - Nilay Bereli
- Hacettepe University; Chemistry Department; Ankara; Turkey
| | - Serpil Özkara
- Anadolu University; Chemistry Department; Eskişehir; Turkey
| | - Lokman Uzun
- Hacettepe University; Chemistry Department; Ankara; Turkey
| | - Adil Denizli
- Hacettepe University; Chemistry Department; Ankara; Turkey
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