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Patel BS, Yadav S, Surolia A, Jayaraman N. Multivalent chitobiose self-assembled glycostructures as ligands to lysozyme. Bioorg Chem 2025; 154:108009. [PMID: 39637484 DOI: 10.1016/j.bioorg.2024.108009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2024] [Revised: 11/23/2024] [Accepted: 11/25/2024] [Indexed: 12/07/2024]
Abstract
Synthetic chitobiose-containing glycolipid (GL) and lipid (L) are prepared in order to secure self-assembled multivalent glycostructures, constituted with varying molar fractions of GL and L. The morphologies of glycostructures are uniform, as adjudged by dynamic light scattering (DLS) in solution and microscopies in the solid state. Presence of the ester linkage between the lipid and chitobiose moieties permit hydrolysis and disassembly of the self-assembled structures at acidic and alkaline pH. The avidity of chitobiose in the multivalent glycostructures to lysozyme follows the percentage of GL in the GL-L compositions in the order 50 % GL > 100 % GL-L > 10 % GL-L. The interaction with lysozyme occurs with fast association and slow dissociation kinetics, from which the equilibrium binding constant (Ka) is identified to be 2-4 orders of magnitude higher (Ka 105 to 107 M-1), as compared to monomeric chitobiose-lysozyme complexation in solution. When assessed for the antimicrobial lytic property of lysozyme, the multivalent chitobiose-lysozyme complex is found to delay the lytic property, when compared to the enzyme alone. The study establishes (i) the pH-sensitive multivalent chitobiose-containing glycostructures for high affinity binding to lysozyme; (ii) that the multivalent ligand presentation enables orders of magnitude higher equilibrium binding constants with enzyme lysozyme and (iii) that the lytic activity of the enzyme is delayed upon complexation with the multivalent glycostructures.
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Affiliation(s)
- Bharat Singh Patel
- Department of Organic Chemistry, Indian Institute of Science, Bangalore, India
| | - Shivender Yadav
- Department of Organic Chemistry, Indian Institute of Science, Bangalore, India
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2
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Sobiepanek A, Kowalska PD, Szota M, Grzywa TM, Nowak J, Włodarski PK, Galus R, Jachimska B, Kobiela T. Novel diagnostic and prognostic factors for the advanced melanoma based on the glycosylation-related changes studied by biophysical profiling methods. Biosens Bioelectron 2022; 203:114046. [PMID: 35121451 DOI: 10.1016/j.bios.2022.114046] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2021] [Revised: 01/21/2022] [Accepted: 01/25/2022] [Indexed: 12/28/2022]
Abstract
Melanoma is a life-threatening disease due to the early onset of metastasis and frequent resistance to the applied treatment. For now, no single histological, immunohistochemical or serological biomarker was able to provide a precise predictive value for the aggressive behavior in melanoma patients. Thus, the search for quantifying methods allowing a simultaneous diagnosis and prognosis of melanoma patients is highly desirable. By investigating specific molecular interactions with some biosensor-based techniques, one can determine novel prognostic factors for this tumor. In our previous study, we have shown the possibility of a qualitative in vitro distinguishing the commercially available melanoma cells at different progression stages based on the measurements of the lectin Concanavalin A interacting with surface glycans present on cells. Here, we present the results of the quantitative diagnostic and prognostic study of both commercial and patient-derived melanoma cells based on the evaluation of two novel factors: lectin affinity and glycan viscoelastic index obtained from the quartz crystal microbalance with dissipation monitoring (QCM-D) measurements. Two approaches to the QCM-D measurements were applied, the first uses the ability of melanoma cells to grow as a monolayer of cells on the sensor (cell-based sensors), and the second shortens the time of the analysis (suspension cell based-sensors). The results were confirmed by the complementary label-free (atomic force microscopy, AFM; and surface plasmon resonance, SPR) and labeling (lectin-ELISA; and microscale thermophoresis, MST) techniques. This new approach provides additional quantitative diagnosis and a personalized prognosis which can be done simultaneously to the traditional histopathological analysis.
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Affiliation(s)
- Anna Sobiepanek
- Faculty of Chemistry, Warsaw University of Technology, Warsaw, Poland.
| | - Patrycja D Kowalska
- Faculty of Chemistry, Warsaw University of Technology, Warsaw, Poland; Polish Stem Cell Bank, Warsaw, Poland
| | - Magdalena Szota
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Krakow, Poland
| | - Tomasz M Grzywa
- Department of Methodology, Centre for Preclinical Research, Medical University of Warsaw, Poland; Department of Immunology, Medical University of Warsaw, Warsaw, Poland; Doctoral School, Medical University of Warsaw, Warsaw, Poland
| | - Jakub Nowak
- Department of Physical Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland
| | - Paweł K Włodarski
- Department of Methodology, Centre for Preclinical Research, Medical University of Warsaw, Poland
| | - Ryszard Galus
- Department of Histology and Embryology, Medical University of Warsaw, Warsaw, Poland
| | - Barbara Jachimska
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Krakow, Poland
| | - Tomasz Kobiela
- Faculty of Chemistry, Warsaw University of Technology, Warsaw, Poland.
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Yadav S, Naresh K, Jayaraman N. "Surface Density of Ligands Controls In-Plane and Aggregative Modes of Multivalent Glycovesicle-Lectin Recognitions". Chembiochem 2021; 22:3075-3081. [PMID: 34375491 DOI: 10.1002/cbic.202100321] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Revised: 08/09/2021] [Indexed: 11/09/2022]
Abstract
Glycovesicles are ideal tools to delineate finer mechanisms of the interactions at the biological cell membranes. Multivalency forms the basis which, in turn, should surpass more than one mechanism in order to maintain multiple roles that the ligand-lectin interactions encounter. Ligand densities hold a prime control to attenuate the interactions. In the present study, mannose trisaccharide interacting with a cognate receptor, namely, Con A, is assessed at the vesicle surfaces. A synthetic (1→3)(1→6)-branched mannose trisaccharide is tethered with a diacetylene monomer and glycovesicles of varying sugar densities are prepared. The polydiacetylene vesicles are prepared by maintaining uniform lipid concentrations. The interactions of the glycovesicles with the lectin are probed through dynamic light scattering and UV-Vis spectroscopy techniques. Binding efficacies are assessed by surface plasmon resonance technique. Aggregative and in-plane modes of interactions follow a ligand density-dependant manner at the vesicle surface. Vesicles with sparsely populated ligands engage lectin in an aggregative mode (trans-), leading to a cross-linked complex formation. Whereas glycovesicles imbedded with dense ligands engage lectin interaction in an in-plane mode intramolecularly (cis-). Sub-nanomolar dissociation constants govern the intramolecular interaction occurring within the plane of the vesicle, relatively more efficacious than the aggregative intermolecular interactions.
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Affiliation(s)
- Shivender Yadav
- Indian Institute of Science, Department of Organic Chemistry, INDIA
| | - Kottari Naresh
- Indian Institute of Science, Department of Organic Chemistry, INDIA
| | - Narayanaswamy Jayaraman
- Indian Institute of Science, Department of Organic Chemistry, Sir C.V. Raman Avenue, 560 012, Bangalore, INDIA
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Chain CY, Daza Millone MA, Cisneros JS, Ramirez EA, Vela ME. Surface Plasmon Resonance as a Characterization Tool for Lipid Nanoparticles Used in Drug Delivery. Front Chem 2021; 8:605307. [PMID: 33490037 PMCID: PMC7817952 DOI: 10.3389/fchem.2020.605307] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2020] [Accepted: 12/04/2020] [Indexed: 12/24/2022] Open
Abstract
The development of drug carriers based in lipid nanoparticles (LNPs) aims toward the synthesis of non-toxic multifunctional nanovehicles that can bypass the immune system and allow specific site targeting, controlled release and complete degradation of the carrier components. Among label free techniques, Surface Plasmon Resonance (SPR) biosensing is a versatile tool to study LNPs in the field of nanotherapeutics research. SPR, widely used for the analysis of molecular interactions, is based on the immobilization of one of the interacting partners to the sensor surface, which can be easily achieved in the case of LNPs by hydrophobic attachment onto commercial lipid- capture sensor chips. In the last years SPR technology has emerged as an interesting strategy for studying molecular aspects of drug delivery that determines the efficacy of the nanotherapeutical such as LNPs' interactions with biological targets, with serum proteins and with tumor extracelullar matrix. Moreover, SPR has contributed to the obtention and characterization of LNPs, gathering information about the interplay between components of the formulations, their response to organic molecules and, more recently, the quantification and molecular characterization of exosomes. By the combination of available sensor platforms, assay quickness and straight forward platform adaptation for new carrier systems, SPR is becoming a high throughput technique for LNPs' characterization and analysis.
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Affiliation(s)
- Cecilia Yamil Chain
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA- Universidad Nacional de La Plata (UNLP)- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)), La Plata, Argentina
| | - María Antonieta Daza Millone
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA- Universidad Nacional de La Plata (UNLP)- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)), La Plata, Argentina
| | - José Sebastián Cisneros
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA- Universidad Nacional de La Plata (UNLP)- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)), La Plata, Argentina
| | - Eduardo Alejandro Ramirez
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA- Universidad Nacional de La Plata (UNLP)- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)), La Plata, Argentina
| | - María Elena Vela
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA- Universidad Nacional de La Plata (UNLP)- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)), La Plata, Argentina
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Coelho ALS, Feuser PE, Carciofi BAM, de Andrade CJ, de Oliveira D. Mannosylerythritol lipids: antimicrobial and biomedical properties. Appl Microbiol Biotechnol 2020; 104:2297-2318. [PMID: 31980917 DOI: 10.1007/s00253-020-10354-z] [Citation(s) in RCA: 49] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Revised: 12/23/2019] [Accepted: 01/05/2020] [Indexed: 12/16/2022]
Abstract
Mannosylerythritol lipids (MELs) have attracted particular interest of medical, pharmaceutical, and cosmetic fields, due to their specific characteristics, including non-toxicity, easy biodegradability, and environmental compatibility. Therefore, this review aims to highlight recent findings on MEL biological properties, focusing on issues related to therapeutic applications. Among the main findings is that MELs can play a fundamental role due to their antimicrobial properties against several nosocomial pathogen microorganisms. Other remarkable biological properties of MELs are related to skincare, as antiaging (active agent), and in particular on recover of skin cells that were damaged by UV radiation. MEL is also related to the increased efficiency of DNA transfection in liposome systems. Regarding the health field, these glycolipids seem to be associated with disturbance in the membrane composition of cancerous cells, increasing expression of genes responsible for cytoplasmic stress and apoptosis. Moreover, MELs can be associated with nanoparticles, as a capping agent, also acting to increase the solubility and cytotoxicity of them. Furthermore, the differences in the chemical structure of MEL could improve and expand their biochemical diversity and applications. Such modifications could change their interfacial properties and, thus, reduce the surface tension value, enhance the solubility, lower critical micelle concentrations, and form unique self-assembly structures. The latest is closely related to molecular recognition and protein stabilization properties of MEL, that is, essential parameters for their effective cosmetical and pharmaceutical effects. Thus, this current research indicates the huge potential of MEL for use in biomedical formulations, either alone or in combination with other molecules.
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Affiliation(s)
- Ana Letícia Silva Coelho
- Department of Chemical Engineering and Food Engineering, Federal University of Santa Catarina, Florianópolis, SC, 88040-900, Brazil
| | - Paulo Emílio Feuser
- Department of Chemical Engineering and Food Engineering, Federal University of Santa Catarina, Florianópolis, SC, 88040-900, Brazil
| | - Bruno Augusto Mattar Carciofi
- Department of Chemical Engineering and Food Engineering, Federal University of Santa Catarina, Florianópolis, SC, 88040-900, Brazil
| | - Cristiano José de Andrade
- Department of Chemical Engineering and Food Engineering, Federal University of Santa Catarina, Florianópolis, SC, 88040-900, Brazil.
| | - Débora de Oliveira
- Department of Chemical Engineering and Food Engineering, Federal University of Santa Catarina, Florianópolis, SC, 88040-900, Brazil
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Freichel T, Laaf D, Hoffmann M, Konietzny PB, Heine V, Wawrzinek R, Rademacher C, Snyder NL, Elling L, Hartmann L. Effects of linker and liposome anchoring on lactose-functionalized glycomacromolecules as multivalent ligands for binding galectin-3. RSC Adv 2019; 9:23484-23497. [PMID: 35530592 PMCID: PMC9069326 DOI: 10.1039/c9ra05497a] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2019] [Accepted: 07/18/2019] [Indexed: 11/21/2022] Open
Abstract
In this work, we present a bottom-up approach for the synthesis of lactose-functionalized glycomacromolecules and glycofunctionalized liposomes and apply these compounds to investigate their effects of multivalent presentation on binding to galectin-3. Step-wise assembly of tailor-made building blocks on solid supports was used to synthesize a series of oligo(amidoamine) scaffolds that were further conjugated to lactose via copper catalyzed 1,3-dipolar cycloaddition. Binding studies with galectin-3 revealed affinities in the micromolar range that increased with increasing carbohydrate valency, and decreased with increasing size and linker flexibility. To further explore their multivalency, selected glycomacromolecules were conjugated to lipids and used in liposomal formulations. Binding studies show a further increase in binding in nanomolar ranges in dependence of both ligand structure and liposomal presentation, demonstrating the power of combining the two approaches.
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Affiliation(s)
- Tanja Freichel
- Department of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf Universitätsstraße 1 40225 Düsseldorf Germany +49-211-81-15840 +49-211-81-10360
| | - Dominic Laaf
- Laboratory for Biomaterials, Institute for Biotechnology, Helmholtz-Institute for Biomedical Engineering, RWTH Aachen University Pauwelsstraße 20 52074 Aachen Germany
| | - Miriam Hoffmann
- Department of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf Universitätsstraße 1 40225 Düsseldorf Germany +49-211-81-15840 +49-211-81-10360
| | - Patrick B Konietzny
- Department of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf Universitätsstraße 1 40225 Düsseldorf Germany +49-211-81-15840 +49-211-81-10360
| | - Viktoria Heine
- Laboratory for Biomaterials, Institute for Biotechnology, Helmholtz-Institute for Biomedical Engineering, RWTH Aachen University Pauwelsstraße 20 52074 Aachen Germany
| | - Robert Wawrzinek
- Max Planck Institute of Colloids and Interfaces Mühlenberg 1 14424 Potsdam Germany
| | - Christoph Rademacher
- Max Planck Institute of Colloids and Interfaces Mühlenberg 1 14424 Potsdam Germany
| | - Nicole L Snyder
- Department of Chemistry, Davidson College North Carolina 28035 USA
| | - Lothar Elling
- Laboratory for Biomaterials, Institute for Biotechnology, Helmholtz-Institute for Biomedical Engineering, RWTH Aachen University Pauwelsstraße 20 52074 Aachen Germany
| | - Laura Hartmann
- Department of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf Universitätsstraße 1 40225 Düsseldorf Germany +49-211-81-15840 +49-211-81-10360
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7
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Hudson EA, de Paula HMC, da Silva RM, Pires ACDS, da Silva LHM. Curcumin-micellar casein multisite interactions elucidated by surface plasmon resonance. Int J Biol Macromol 2019; 133:860-866. [DOI: 10.1016/j.ijbiomac.2019.04.166] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2019] [Revised: 04/23/2019] [Accepted: 04/23/2019] [Indexed: 11/24/2022]
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8
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Curvophilic-curvophobic balance of monoalkyl-mannosides determines the magnitude of disturbance promoted in synthetic bilayers. J Mol Liq 2019. [DOI: 10.1016/j.molliq.2019.03.019] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Sha H, Zhang Y, Wang Y, Ke H, Xiong X, Jia N. Electrochemiluminescence resonance energy transfer biosensor between the glucose functionalized MnO2 and g-C3N4 nanocomposites for ultrasensitive detection of concanavalin A. Biosens Bioelectron 2019; 124-125:59-65. [DOI: 10.1016/j.bios.2018.10.023] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2018] [Revised: 10/10/2018] [Accepted: 10/11/2018] [Indexed: 10/28/2022]
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Sandoval-Altamirano C, Sanchez S, Pizarro N, Morales J, Gunther G. Alkyl-mannoside derivatives: Glycolipids able to form big size aggregates. J PHYS ORG CHEM 2019. [DOI: 10.1002/poc.3822] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- C. Sandoval-Altamirano
- Departamento de Química Orgánica y Fisicoquímica; Universidad de Chile, Facultad de Ciencias Químicas y Farmacéuticas; Santiago 1 Chile
| | - S.A. Sanchez
- Departamento de Polímeros; Universidad de Concepción, Facultad de Química; Concepción Chile
| | - N. Pizarro
- Departamento de Ciencias Químicas; Universidad Andrés Bello, Facultad de Ciencias Exactas; Viña del Mar Chile
| | - J. Morales
- Departamento de Ciencias y Tecnología Farmacéuticas; Universidad de Chile, Facultad de Ciencias Químicas y Farmacéuticas; Santiago Chile
| | - G. Gunther
- Departamento de Química Orgánica y Fisicoquímica; Universidad de Chile, Facultad de Ciencias Químicas y Farmacéuticas; Santiago 1 Chile
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Phase-segregated Membrane Model assessed by a combined SPR-AFM Approach. Colloids Surf B Biointerfaces 2018; 172:423-429. [DOI: 10.1016/j.colsurfb.2018.08.066] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Revised: 08/09/2018] [Accepted: 08/29/2018] [Indexed: 12/22/2022]
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12
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Bryce DA, Kitt JP, Harris JM. Confocal Raman Microscopy for Label-Free Detection of Protein–Ligand Binding at Nanopore-Supported Phospholipid Bilayers. Anal Chem 2018; 90:11509-11516. [DOI: 10.1021/acs.analchem.8b02791] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- David A. Bryce
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850, United States
| | - Jay P. Kitt
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850, United States
| | - Joel M. Harris
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850, United States
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