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de la Viuda V, Buceta J, Grobas I. Physical communication pathways in bacteria: an extra layer to quorum sensing. Biophys Rev 2025; 17:667-685. [PMID: 40376406 PMCID: PMC12075086 DOI: 10.1007/s12551-025-01290-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2024] [Accepted: 02/13/2025] [Indexed: 05/18/2025] Open
Abstract
Bacterial communication is essential for survival, adaptation, and collective behavior. While chemical signaling, such as quorum sensing, has been extensively studied, physical cues play a significant role in bacterial interactions. This review explores the diverse range of physical stimuli, including mechanical forces, electromagnetic fields, temperature, acoustic vibrations, and light that bacteria may experience with their environment and within a community. By integrating these diverse communication pathways, bacteria can coordinate their activities and adapt to changing environmental conditions. Furthermore, we discuss how these physical stimuli modulate bacterial growth, lifestyle, motility, and biofilm formation. By understanding the underlying mechanisms, we can develop innovative strategies to combat bacterial infections and optimize industrial processes.
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Affiliation(s)
- Virgilio de la Viuda
- Theoretical and Computational Systems Biology Program, Institute for Integrative Systems Biology (I2sysbio), CSIC-UV, Catedrático Agustín Escardino Benlloch 9, 46980 Paterna, Spain
| | - Javier Buceta
- Theoretical and Computational Systems Biology Program, Institute for Integrative Systems Biology (I2sysbio), CSIC-UV, Catedrático Agustín Escardino Benlloch 9, 46980 Paterna, Spain
| | - Iago Grobas
- Theoretical and Computational Systems Biology Program, Institute for Integrative Systems Biology (I2sysbio), CSIC-UV, Catedrático Agustín Escardino Benlloch 9, 46980 Paterna, Spain
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Guo L, Ruan Q, Ma D, Wen J. Revealing quorum-sensing networks in Pseudomonas aeruginosa infections through internal and external signals to prevent new resistance trends. Microbiol Res 2024; 289:127915. [PMID: 39342746 DOI: 10.1016/j.micres.2024.127915] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2024] [Revised: 07/18/2024] [Accepted: 09/19/2024] [Indexed: 10/01/2024]
Abstract
In the context of growing antibiotic resistance in bacteria, the quorum-sensing (QS) system of Pseudomonas aeruginosa (P. aeruginosa) has become a target for new therapeutic strategies. QS is a crucial communication process and an essential pathogenic mechanism. This comprehensive review explores the critical role of QS in the pathogenesis of P. aeruginosa infections, including lung, burn, bloodstream, gastrointestinal, corneal, and urinary tract infections. In addition, this review delves into the complexity of the bacterial QS communication network and highlights the intricate mechanisms underlying these pathological processes. Notably, in addition to the four main QS systems, bacterial QS can interact with various external and internal signaling networks, such as host environments and nutrients in the external microbiome, as well as internal virulence regulation systems within bacteria. These elements can significantly influence the behavior and virulence of microbial communities. Therefore, this review reveals that inhibitors targeting singular QS pathways may inadvertently promote virulence in other pathways, leading to new trends in drug resistance. In response to evolving resistance challenges, this study proposes more cautious treatment strategies, including multitarget interventions and combination therapies, aimed at combating the escalating issue of resistance.
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Affiliation(s)
- Li Guo
- Department of Endodontics, Stomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou, Guangdong, China
| | - Qiao Ruan
- Department of Endodontics, Stomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou, Guangdong, China
| | - Dandan Ma
- Department of Endodontics, Stomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou, Guangdong, China.
| | - Jun Wen
- Department of Endodontics, Stomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou, Guangdong, China.
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Wallart L, Ben Mlouka MA, Saffiedine B, Coquet L, Le H, Hardouin J, Jouenne T, Phan G, Kiefer-Meyer MC, Girard E, Broutin I, Cosette P. BacA: a possible regulator that contributes to the biofilm formation of Pseudomonas aeruginosa. Front Microbiol 2024; 15:1332448. [PMID: 38505547 PMCID: PMC10948618 DOI: 10.3389/fmicb.2024.1332448] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Accepted: 02/12/2024] [Indexed: 03/21/2024] Open
Abstract
Previously, we pointed out in P. aeruginosa PAO1 biofilm cells the accumulation of a hypothetical protein named PA3731 and showed that the deletion of the corresponding gene impacted its biofilm formation capacity. PA3731 belongs to a cluster of 4 genes (pa3732 to pa3729) that we named bac for "Biofilm Associated Cluster." The present study focuses on the PA14_16140 protein, i.e., the PA3732 (BacA) homolog in the PA14 strain. The role of BacA in rhamnolipid secretion, biofilm formation and virulence, was confirmed by phenotypic experiments with a bacA mutant. Additional investigations allow to advance that the bac system involves in fact 6 genes organized in operon, i.e., bacA to bacF. At a molecular level, quantitative proteomic studies revealed an accumulation of the BAC cognate partners by the bacA sessile mutant, suggesting a negative control of BacA toward the bac operon. Finally, a first crystallographic structure of BacA was obtained revealing a structure homologous to chaperones or/and regulatory proteins.
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Affiliation(s)
- Lisa Wallart
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, PBS UMR 6270, Rouen, France
| | - Mohamed Amine Ben Mlouka
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, PBS UMR 6270, Rouen, France
- Univ Rouen Normandy, INSERM US 51, CNRS UAR 2026, HeRacLeS PISSARO, Rouen, France
| | - Brahim Saffiedine
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, PBS UMR 6270, Rouen, France
| | - Laurent Coquet
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, PBS UMR 6270, Rouen, France
- Univ Rouen Normandy, INSERM US 51, CNRS UAR 2026, HeRacLeS PISSARO, Rouen, France
| | - Hung Le
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, PBS UMR 6270, Rouen, France
- Univ Rouen Normandy, INSERM US 51, CNRS UAR 2026, HeRacLeS PISSARO, Rouen, France
| | - Julie Hardouin
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, PBS UMR 6270, Rouen, France
- Univ Rouen Normandy, INSERM US 51, CNRS UAR 2026, HeRacLeS PISSARO, Rouen, France
| | - Thierry Jouenne
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, PBS UMR 6270, Rouen, France
| | - Gilles Phan
- Paris Cité University, CiTCoM, CNRS, Paris, France
| | - Marie-Christine Kiefer-Meyer
- Univ Rouen Normandie, Normandie Univ, GlycoMEV UR 4358, SFR Normandie Végétal FED 4277, Innovation Chimie Carnot, RMT BESTIM, GDR Chemobiologie, IRIB, Rouen, France
| | - Eric Girard
- Grenoble Alpes University, CNRS, CEA, IBS, Grenoble, France
| | | | - Pascal Cosette
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, PBS UMR 6270, Rouen, France
- Univ Rouen Normandy, INSERM US 51, CNRS UAR 2026, HeRacLeS PISSARO, Rouen, France
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Bru JL, Kasallis SJ, Chang R, Zhuo Q, Nguyen J, Pham P, Warren E, Whiteson K, Høyland-Kroghsbo NM, Limoli DH, Siryaporn A. The great divide: rhamnolipids mediate separation between P. aeruginosa and S. aureus. Front Cell Infect Microbiol 2023; 13:1245874. [PMID: 37780859 PMCID: PMC10540625 DOI: 10.3389/fcimb.2023.1245874] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Accepted: 08/23/2023] [Indexed: 10/03/2023] Open
Abstract
The interactions between bacterial species during infection can have significant impacts on pathogenesis. Pseudomonas aeruginosa and Staphylococcus aureus are opportunistic bacterial pathogens that can co-infect hosts and cause serious illness. The factors that dictate whether one species outcompetes the other or whether the two species coexist are not fully understood. We investigated the role of surfactants in the interactions between these two species on a surface that enables P. aeruginosa to swarm. We found that P. aeruginosa swarms are repelled by colonies of clinical S. aureus isolates, creating physical separation between the two strains. This effect was abolished in mutants of S. aureus that were defective in the production of phenol-soluble modulins (PSMs), which form amyloid fibrils around wild-type S. aureus colonies. We investigated the mechanism that establishes physical separation between the two species using Imaging of Reflected Illuminated Structures (IRIS), which is a non-invasive imaging method that tracks the flow of surfactants produced by P. aeruginosa. We found that PSMs produced by S. aureus deflected the surfactant flow, which in turn, altered the direction of P. aeruginosa swarms. These findings show that rhamnolipids mediate physical separation between P. aeruginosa and S. aureus, which could facilitate coexistence between these species. Additionally, we found that a number of molecules repelled P. aeruginosa swarms, consistent with a surfactant deflection mechanism. These include Bacillus subtilis surfactant, the fatty acids oleic acid and linoleic acid, and the synthetic lubricant polydimethylsiloxane. Lung surfactant repelled P. aeruginosa swarms and inhibited swarm expansion altogether at higher concentration. Our results suggest that surfactant interactions could have major impacts on bacteria-bacteria and bacteria-host relationships. In addition, our findings uncover a mechanism responsible for P. aeruginosa swarm development that does not rely solely on sensing but instead is based on the flow of surfactant.
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Affiliation(s)
- Jean-Louis Bru
- Department of Molecular Biology & Biochemistry, University of California, Irvine, Irvine, CA, United States
| | - Summer J. Kasallis
- Department of Molecular Biology & Biochemistry, University of California, Irvine, Irvine, CA, United States
- Department of Physics & Astronomy, University of California, Irvine, Irvine, CA, United States
| | - Rendell Chang
- School of Biological Sciences, University of California, Irvine, Irvine, CA, United States
| | - Quantum Zhuo
- Department of Physics & Astronomy, University of California, Irvine, Irvine, CA, United States
| | - Jacqueline Nguyen
- School of Biological Sciences, University of California, Irvine, Irvine, CA, United States
| | - Phillip Pham
- Department of Molecular Biology & Biochemistry, University of California, Irvine, Irvine, CA, United States
| | - Elizabeth Warren
- Department of Microbiology and Immunology, University of Iowa, Iowa City, IA, United States
| | - Katrine Whiteson
- Department of Molecular Biology & Biochemistry, University of California, Irvine, Irvine, CA, United States
| | | | - Dominique H. Limoli
- Department of Microbiology and Immunology, University of Iowa, Iowa City, IA, United States
| | - Albert Siryaporn
- Department of Molecular Biology & Biochemistry, University of California, Irvine, Irvine, CA, United States
- Department of Physics & Astronomy, University of California, Irvine, Irvine, CA, United States
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Bru JL, Kasallis SJ, Zhuo Q, Høyland-Kroghsbo NM, Siryaporn A. Swarming of P. aeruginosa: Through the lens of biophysics. BIOPHYSICS REVIEWS 2023; 4:031305. [PMID: 37781002 PMCID: PMC10540860 DOI: 10.1063/5.0128140] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Accepted: 08/29/2023] [Indexed: 10/03/2023]
Abstract
Swarming is a collective flagella-dependent movement of bacteria across a surface that is observed across many species of bacteria. Due to the prevalence and diversity of this motility modality, multiple models of swarming have been proposed, but a consensus on a general mechanism for swarming is still lacking. Here, we focus on swarming by Pseudomonas aeruginosa due to the abundance of experimental data and multiple models for this species, including interpretations that are rooted in biology and biophysics. In this review, we address three outstanding questions about P. aeruginosa swarming: what drives the outward expansion of a swarm, what causes the formation of dendritic patterns (tendrils), and what are the roles of flagella? We review models that propose biologically active mechanisms including surfactant sensing as well as fluid mechanics-based models that consider swarms as thin liquid films. Finally, we reconcile recent observations of P. aeruginosa swarms with early definitions of swarming. This analysis suggests that mechanisms associated with sliding motility have a critical role in P. aeruginosa swarm formation.
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Affiliation(s)
- Jean-Louis Bru
- Department of Molecular Biology and Biochemistry, University of California Irvine, Irvine, California 92697, USA
| | - Summer J. Kasallis
- Department of Physics and Astronomy, University of California Irvine, Irvine, California 92697, USA
| | - Quantum Zhuo
- Department of Physics and Astronomy, University of California Irvine, Irvine, California 92697, USA
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