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Kirsch R, Okamura Y, García-Lozano M, Weiss B, Keller J, Vogel H, Fukumori K, Fukatsu T, Konstantinov AS, Montagna M, Moseyko AG, Riley EG, Slipinski A, Vencl FV, Windsor DM, Salem H, Kaltenpoth M, Pauchet Y. Symbiosis and horizontal gene transfer promote herbivory in the megadiverse leaf beetles. Curr Biol 2025; 35:640-654.e7. [PMID: 39826554 DOI: 10.1016/j.cub.2024.12.028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Revised: 11/01/2024] [Accepted: 12/10/2024] [Indexed: 01/22/2025]
Abstract
Beetles that feed on the nutritionally depauperate and recalcitrant tissues provided by the leaves, stems, and roots of living plants comprise one-quarter of herbivorous insect species. Among the key adaptations for herbivory are plant cell wall-degrading enzymes (PCWDEs) that break down the fastidious polymers in the cell wall and grant access to the nutritious cell content. While largely absent from the non-herbivorous ancestors of beetles, such PCWDEs were occasionally acquired via horizontal gene transfer (HGT) or by the uptake of digestive symbionts. However, the macroevolutionary dynamics of PCWDEs and their impact on evolutionary transitions in herbivorous insects remained poorly understood. Through genomic and transcriptomic analyses of 74 leaf beetle species and 50 symbionts, we show that multiple independent events of microbe-to-beetle HGT and specialized symbioses drove convergent evolutionary innovations in approximately 21,000 and 13,500 leaf beetle species, respectively. Enzymatic assays indicate that these events significantly expanded the beetles' digestive repertoires and thereby contributed to their adaptation and diversification. Our results exemplify how recurring HGT and symbiont acquisition catalyzed digestive and nutritional adaptations to herbivory and thereby contributed to the evolutionary success of a megadiverse insect taxon.
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Affiliation(s)
- Roy Kirsch
- Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, Hans-Knoell-Str. 8, 07745 Jena, Germany
| | - Yu Okamura
- Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, Hans-Knoell-Str. 8, 07745 Jena, Germany; Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo 113-0033, Japan
| | - Marleny García-Lozano
- Mutualisms Research Group, Max Planck Institute for Biology, Max-Planck-Ring 5, 72076 Tübingen, Germany
| | - Benjamin Weiss
- Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, Hans-Knoell-Str. 8, 07745 Jena, Germany
| | - Jean Keller
- Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, Hans-Knoell-Str. 8, 07745 Jena, Germany
| | - Heiko Vogel
- Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, Hans-Knoell-Str. 8, 07745 Jena, Germany
| | - Kayoko Fukumori
- Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukuba 305-8566, Japan
| | - Takema Fukatsu
- Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukuba 305-8566, Japan
| | - Alexander S Konstantinov
- Systematic Entomology Laboratory, USDA, ARS, c/o Smithsonian Institution, National Museum of Natural History, 10th Street & Constitution Avenue, Washington, DC 20560, USA
| | - Matteo Montagna
- Department of Agricultural Sciences, University of Naples Federico II, Via Università 100, 80055 Portici (Naples), Italy; Interuniversity Center for Studies on Bioinspired Agro-Environmental Technology, University of Naples Federico II, Via Università 100, 80055 Portici (Naples), Italy
| | - Alexey G Moseyko
- Zoological Institute, Russian Academy of Sciences, Universitetskaya embankment 1, 199034 St. Petersburg, Russia
| | - Edward G Riley
- Department of Entomology, Texas A&M University, 400 Bizzell Street, College Station, TX 77843, USA
| | - Adam Slipinski
- Australian National Insect Collection, CSIRO, Black Mountain Laboratories, Clunies Ross Street, GPO Box 1700, Canberra, ACT, Australia
| | - Fredric V Vencl
- Ecology and Evolution, Stony Brook University, Stony Brook, NY 11790, USA; Entomology, National Museum of Natural History, Smithsonian Institution, 10th Street & Constitution Avenue, Washington, DC 20560, USA
| | - Donald M Windsor
- Smithsonian Tropical Research Institute, Luis Clement Avenue, Bldg. 401 Tupper Ancon, Panama City, Republic of Panama
| | - Hassan Salem
- Mutualisms Research Group, Max Planck Institute for Biology, Max-Planck-Ring 5, 72076 Tübingen, Germany.
| | - Martin Kaltenpoth
- Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, Hans-Knoell-Str. 8, 07745 Jena, Germany.
| | - Yannick Pauchet
- Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, Hans-Knoell-Str. 8, 07745 Jena, Germany.
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García-Lozano M, Salem H. Microbial bases of herbivory in beetles. Trends Microbiol 2025; 33:151-163. [PMID: 39327210 DOI: 10.1016/j.tim.2024.08.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2024] [Revised: 08/07/2024] [Accepted: 08/12/2024] [Indexed: 09/28/2024]
Abstract
The ecological radiation of herbivorous beetles is among the most successful in the animal kingdom. It coincided with the rise and diversification of flowering plants, requiring beetles to adapt to a nutritionally imbalanced diet enriched in complex polysaccharides and toxic secondary metabolites. In this review, we explore how beetles overcame these challenges by coopting microbial genes, enzymes, and metabolites, through both horizontal gene transfer (HGT) and symbiosis. Recent efforts revealed the functional convergence governing both processes and the unique ways in which microbes continue to shape beetle digestion, development, and defense. The development of genetic and experimental tools across a diverse set of study systems has provided valuable mechanistic insights into how microbes spurred metabolic innovation and facilitated an herbivorous transition in beetles.
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Affiliation(s)
- Marleny García-Lozano
- Mutualisms Research Group, Max Planck Institute for Biology, Tübingen 72076, Germany
| | - Hassan Salem
- Mutualisms Research Group, Max Planck Institute for Biology, Tübingen 72076, Germany.
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Oguchi K, Harumoto T, Katsuno T, Matsuura Y, Chiyoda S, Fukatsu T. Intracellularity, extracellularity, and squeezing in the symbiotic organ underpin nurturing and functioning of bacterial symbiont in leaf beetles. iScience 2024; 27:109731. [PMID: 38689638 PMCID: PMC11059521 DOI: 10.1016/j.isci.2024.109731] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 02/10/2024] [Accepted: 04/09/2024] [Indexed: 05/02/2024] Open
Abstract
Cassidine leaf beetles are associated with genome-reduced symbiotic bacteria Stammera involved in pectin digestion. Stammera cells appear to be harbored in paired symbiotic organs located at the foregut-midgut junction either intracellularly or extracellularly, whereas the symbiont is extracellular in the ovary-accessory glands of adult females and during caplet transmission in eggs. However, using fluorescence and electron microscopy, an intracellular symbiotic configuration of Stammera was observed in Notosacantha species. Detailed inspection of other cassidine species revealed fragmented cell membrane and cytoplasm of the symbiotic organs, wherein Stammera cells are in an intermediate status between intracellularity and extracellularity. We also identified a mitochondria-rich region adjacent to the symbiont-filled region and well-developed muscle fibers surrounding the whole symbiotic organ. Based on these observations, we discuss why the Stammera genome has been reduced so drastically and how symbiont-derived pectinases are produced and supplied to the host's alimentary tract for plant cell wall digestion.
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Affiliation(s)
- Kohei Oguchi
- Bioproducion Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Japan
- Misaki Marine Biological Station (MMBS), School of Science, The University of Tokyo, Miura, Japan
| | - Toshiyuki Harumoto
- Hakubi Center for Advanced Research, Kyoto University, Kyoto, Japan
- Graduate School of Biostudies, Kyoto University, Kyoto, Japan
| | - Tatsuya Katsuno
- Center for Anatomical Studies, Graduate School of Medicine, Kyoto University, Kyoto, Japan
- KOKORO-Biology Group, Laboratories for Integrated Biology, Graduate School of Frontier Biosciences, Osaka University, Suita, Japan
| | - Yu Matsuura
- Tropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa, Japan
| | - Soma Chiyoda
- Misaki Marine Biological Station (MMBS), School of Science, The University of Tokyo, Miura, Japan
| | - Takema Fukatsu
- Bioproducion Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Japan
- Department of Biological Sciences, Graduate School of Science, the University of Tokyo, Tokyo, Japan
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Japan
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González Porras MÁ, Pons I, García-Lozano M, Jagdale S, Emmerich C, Weiss B, Salem H. Extracellular symbiont colonizes insect during embryo development. ISME COMMUNICATIONS 2024; 4:ycae005. [PMID: 38439943 PMCID: PMC10910848 DOI: 10.1093/ismeco/ycae005] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Revised: 01/11/2024] [Accepted: 01/17/2024] [Indexed: 03/06/2024]
Abstract
Insects typically acquire their beneficial microbes early in development. Endosymbionts housed intracellularly are commonly integrated during oogenesis or embryogenesis, whereas extracellular microbes are only known to be acquired after hatching by immature instars such as larvae or nymphs. Here, however, we report on an extracellular symbiont that colonizes its host during embryo development. Tortoise beetles (Chrysomelidae: Cassidinae) host their digestive bacterial symbiont Stammera extracellularly within foregut symbiotic organs and in ovary-associated glands to ensure its vertical transmission. We outline the initial stages of symbiont colonization and observe that although the foregut symbiotic organs develop 3 days prior to larval emergence, they remain empty until the final 24 h of embryo development. Infection by Stammera occurs during that timeframe and prior to hatching. By experimentally manipulating symbiont availability to embryos in the egg, we describe a 12-h developmental window governing colonization by Stammera. Symbiotic organs form normally in aposymbiotic larvae, demonstrating that these Stammera-bearing structures develop autonomously. In adults, the foregut symbiotic organs are already colonized following metamorphosis and host a stable Stammera population to facilitate folivory. The ovary-associated glands, however, initially lack Stammera. Symbiont abundance subsequently increases within these transmission organs, thereby ensuring sufficient titers at the onset of oviposition ~29 days following metamorphosis. Collectively, our findings reveal that Stammera colonization precedes larval emergence, where its proliferation is eventually decoupled in adult beetles to match the nutritional and reproductive requirements of its host.
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Affiliation(s)
| | - Inès Pons
- Mutualisms Research Group, Max Planck Institute for Biology, Tübingen 72076, Germany
| | - Marleny García-Lozano
- Mutualisms Research Group, Max Planck Institute for Biology, Tübingen 72076, Germany
| | - Shounak Jagdale
- Mutualisms Research Group, Max Planck Institute for Biology, Tübingen 72076, Germany
| | - Christiane Emmerich
- Mutualisms Research Group, Max Planck Institute for Biology, Tübingen 72076, Germany
| | - Benjamin Weiss
- Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, Jena 07745, Germany
| | - Hassan Salem
- Mutualisms Research Group, Max Planck Institute for Biology, Tübingen 72076, Germany
- Smithsonian Tropical Research Institute, Panama City 0843-03092, Republic of Panama
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