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She W, Holyoak M, Gu J, Qi J, Liu S, Jiang G. Abundant top predators increase species interaction network complexity in northeastern Chinese forests. J Anim Ecol 2025; 94:745-759. [PMID: 39985159 PMCID: PMC11962246 DOI: 10.1111/1365-2656.70011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2024] [Accepted: 01/30/2025] [Indexed: 02/24/2025]
Abstract
Species interactions remain a cornerstone in shaping community dynamics and structure, alongside other factors, such as climate conditions and human activities. Although network structure is known to influence community stability and ecosystem functioning, the roles of top predators in shaping interaction network structure remain obscure. We examined a 5-7-year time series of species detections for mammal communities in multiple protected areas to investigate the association between top predators and interaction network structure. Our findings suggest that abundant species, day-active species and species with wide habitat breadth interact with more species, as did species that were more affected by vehicle disturbance. With increased densities of top predators, interaction networks exhibited greater complexity, with increased connectance, nestedness and average degree. An increased density of mesopredators, such as yellow-throated martens and badgers, was associated with sparser, less nested, but more centralized interaction networks. Top predators reduced the degree of highly interactive species, making them more specialized, and increased the degree of less abundant species, making them more general. In particular, this redistribution of interactions was not driven by direct changes in species density of top predators but seemingly by non-consumptive or indirect effects. Our findings emphasize the pivotal role of the main predators in structuring interactions within northeastern China's mammal communities, with large implications for conservation and management.
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Affiliation(s)
- Wen She
- Feline Research Center of National Forestry and Grassland Administration, College of Wildlife and Protected AreaNortheast Forestry UniversityHarbinChina
- Northeast Asia Biodiversity Research CenterNortheast Forestry UniversityHarbinChina
| | - Marcel Holyoak
- Department of Environmental Science and PolicyUniversity of CaliforniaDavisCaliforniaUSA
| | - Jiayin Gu
- Feline Research Center of National Forestry and Grassland Administration, College of Wildlife and Protected AreaNortheast Forestry UniversityHarbinChina
| | - Jinzhe Qi
- Feline Research Center of National Forestry and Grassland Administration, College of Wildlife and Protected AreaNortheast Forestry UniversityHarbinChina
| | - Shuyan Liu
- Feline Research Center of National Forestry and Grassland Administration, College of Wildlife and Protected AreaNortheast Forestry UniversityHarbinChina
| | - Guangshun Jiang
- Feline Research Center of National Forestry and Grassland Administration, College of Wildlife and Protected AreaNortheast Forestry UniversityHarbinChina
- Northeast Asia Biodiversity Research CenterNortheast Forestry UniversityHarbinChina
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Ojwang’ AME, Lloyd AL, Bhattacharyya S, Chatterjee S, Gent DH, Ojiambo PS. Identifying highly connected sites for risk-based surveillance and control of cucurbit downy mildew in the eastern United States. PeerJ 2024; 12:e17649. [PMID: 39056053 PMCID: PMC11271662 DOI: 10.7717/peerj.17649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Accepted: 06/06/2024] [Indexed: 07/28/2024] Open
Abstract
Objective Surveillance is critical for the rapid implementation of control measures for diseases caused by aerially dispersed plant pathogens, but such programs can be resource-intensive, especially for epidemics caused by long-distance dispersed pathogens. The current cucurbit downy mildew platform for monitoring, predicting and communicating the risk of disease spread in the United States is expensive to maintain. In this study, we focused on identifying sites critical for surveillance and treatment in an attempt to reduce disease monitoring costs and determine where control may be applied to mitigate the risk of disease spread. Methods Static networks were constructed based on the distance between fields, while dynamic networks were constructed based on the distance between fields and wind speed and direction, using disease data collected from 2008 to 2016. Three strategies were used to identify highly connected field sites. First, the probability of pathogen transmission between nodes and the probability of node infection were modeled over a discrete weekly time step within an epidemic year. Second, nodes identified as important were selectively removed from networks and the probability of node infection was recalculated in each epidemic year. Third, the recurring patterns of node infection were analyzed across epidemic years. Results Static networks exhibited scale-free properties where the node degree followed a power-law distribution. Betweenness centrality was the most useful metric for identifying important nodes within the networks that were associated with disease transmission and prediction. Based on betweenness centrality, field sites in Maryland, North Carolina, Ohio, South Carolina and Virginia were the most central in the disease network across epidemic years. Removing field sites identified as important limited the predicted risk of disease spread based on the dynamic network model. Conclusions Combining the dynamic network model and centrality metrics facilitated the identification of highly connected fields in the southeastern United States and the mid-Atlantic region. These highly connected sites may be used to inform surveillance and strategies for controlling cucurbit downy mildew in the eastern United States.
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Affiliation(s)
- Awino M. E. Ojwang’
- Biomathematics Graduate Program and Department of Mathematics, North Carolina State University, Raleigh, NC, United States
| | - Alun L. Lloyd
- Biomathematics Graduate Program and Department of Mathematics, North Carolina State University, Raleigh, NC, United States
| | | | - Shirshendu Chatterjee
- Department of Mathematics, City University of New York, City College, New York, NY, United States
| | - David H. Gent
- Agricultural Research Service, U.S. Department of Agriculture, Corvallis, OR, United States
| | - Peter S. Ojiambo
- Center for Integrated Fungal Research, Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC, United States
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Flock-species richness influences node importance and modularity in mixed-species flock networks. Oecologia 2021; 198:431-440. [PMID: 34709417 DOI: 10.1007/s00442-021-05053-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2020] [Accepted: 09/28/2021] [Indexed: 10/20/2022]
Abstract
Interdependencies in social groups of animals are a combination of multiple pairwise interactions. Heterospecific groups are often characterized by important species that contribute more to group initiation, maintenance or function than other species. However, in large heterospecific groups, many pairwise interactions are not realised, while others may not be biologically significant, confounding inferences about species importance. Hence, in this study, we examine context dependent changes in species importance and assortment in mixed-species bird flocks from a tropical field site in Southern India using social network analysis. Specifically, we ask how the structural importance of a species and the clustering patterns of species relationships depends on species richness in mixed-species flocks. We constructed both raw and filtered networks; while our results are largely correlated, we believe that filtered networks can provide insights into community-level importance of species in mixed-flocks while raw networks depict flock-level patterns. We find significant differences in flocks of different richness in that different species emerge as structurally important across flocks of varying richness. We also find that assortment is higher in two-species flocks and decreases with an increase in the number of species in the flock ('flock richness' hereafter). We argue that the link between structural importance of species in mixed-species flock networks and their functional significance in the community critically depends on the social context: namely, the species richness of the mixed-species flock. We propose that examining species structural importance at different flock-richness values provides insights into biologically meaningful functional roles of species. More generally, we suggest that it is important to consider context when interpreting species centrality and importance in network structure.
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Puche E, Jordán F, Rodrigo MA, Rojo C. Non‐trophic key players in aquatic ecosystems: a mesocosm experiment. OIKOS 2020. [DOI: 10.1111/oik.07476] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Eric Puche
- Cavanilles Inst. of Biodiversity and Evolutionary Biology, Univ. of Valencia Spain
| | - Ferenc Jordán
- Balaton Limnological Inst., Centre for Ecological Research, Tihany, Hungary, and Evolutionary Systems Research Group, Centre for Ecological Research Tihany Hungary
| | - María A. Rodrigo
- Cavanilles Inst. of Biodiversity and Evolutionary Biology, Univ. of Valencia Spain
| | - Carmen Rojo
- Cavanilles Inst. of Biodiversity and Evolutionary Biology, Univ. of Valencia Spain
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Kluger LC, Gorris P, Kochalski S, Mueller MS, Romagnoni G. Studying human–nature relationships through a network lens: A systematic review. PEOPLE AND NATURE 2020. [DOI: 10.1002/pan3.10136] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
Affiliation(s)
- Lotta C. Kluger
- Leibniz Centre for Tropical Marine Research (ZMT) Bremen Germany
- University of Bremenartec Sustainability Research Center Bremen Germany
| | - Philipp Gorris
- Institute of Environmental Systems Research (IUSF) Osnabrueck University Osnabrueck Germany
| | - Sophia Kochalski
- Department of Biology and Ecology of Fishes Leibniz‐Institute of Freshwater Ecology and Inland Fisheries (IGB) Berlin Germany
| | - Miriam S. Mueller
- Posgrado en Ciencias del Mar y Limnología Universidad Nacional Autónoma de MéxicoUnidad Académica Mazatlán Mazatlan Mexico
- German Federal Agency for Nature Conservation Isle of Vilm Putbus Germany
| | - Giovanni Romagnoni
- Department of Biosciences Centre for Ecological and Evolutionary Synthesis (CEES) University of Oslo Oslo Norway
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Puche E, Rojo C, Ramos‐Jiliberto R, Rodrigo MA. Structure and vulnerability of the multi‐interaction network in macrophyte‐dominated lakes. OIKOS 2019. [DOI: 10.1111/oik.06694] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Eric Puche
- Cavanilles Inst. of Biodiversity and Evolutionary Biology, Univ. of Valencia c/Catedrático José Beltrán 2 ES‐46980 Paterna Spain
| | - Carmen Rojo
- Cavanilles Inst. of Biodiversity and Evolutionary Biology, Univ. of Valencia c/Catedrático José Beltrán 2 ES‐46980 Paterna Spain
| | - Rodrigo Ramos‐Jiliberto
- GEMA Center for Genomics, Ecology and Environment, Facultad de Ciencias, Univ Mayor Santiago Chile
| | - María A. Rodrigo
- Cavanilles Inst. of Biodiversity and Evolutionary Biology, Univ. of Valencia c/Catedrático José Beltrán 2 ES‐46980 Paterna Spain
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Żywiec M, Fedriani JM, Kurek P, Holeksa J. Non‐trophic plant–animal interactions mediate positive density dependence among conspecific saplings. OIKOS 2019. [DOI: 10.1111/oik.06071] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Magdalena Żywiec
- Centre for Applied Ecology ‘Prof. Baeta Neves’ (CEABN‐InBIO), Inst. Superior of Agronomy, Univ. of Lisbon Lisboa Portugal
- W. Szafer Inst. of Botany, Polish Academy of Sciences Lubicz 46, 31 512 Kraków Poland
| | - José M. Fedriani
- Centre for Applied Ecology ‘Prof. Baeta Neves’ (CEABN‐InBIO), Inst. Superior of Agronomy, Univ. of Lisbon Lisboa Portugal
- Dept of Conservation Biology, Estacion Biologica de Doñana (EBD – CSIC) Seville Spain
| | - Przemysław Kurek
- Dept of Plant Ecology and Environmental Protection, Faculty of Biology, Adam Mickiewicz Univ Poznań Poland
| | - Jan Holeksa
- Dept of Plant Ecology and Environmental Protection, Faculty of Biology, Adam Mickiewicz Univ Poznań Poland
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Modelling plankton ecosystems in the meta-omics era. Are we ready? Mar Genomics 2017; 32:1-17. [DOI: 10.1016/j.margen.2017.02.006] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2016] [Revised: 02/24/2017] [Accepted: 02/25/2017] [Indexed: 12/30/2022]
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9
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The efficacy of fisheries closure in rebuilding depleted stocks: Lessons from size-spectrum modeling. Ecol Modell 2016. [DOI: 10.1016/j.ecolmodel.2016.04.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Frugivory in Canopy Plants in a Western Amazonian Forest: Dispersal Systems, Phylogenetic Ensembles and Keystone Plants. PLoS One 2015; 10:e0140751. [PMID: 26492037 PMCID: PMC4619584 DOI: 10.1371/journal.pone.0140751] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2015] [Accepted: 09/30/2015] [Indexed: 12/01/2022] Open
Abstract
Frugivory is a widespread mutualistic interaction in which frugivores obtain nutritional resources while favoring plant recruitment through their seed dispersal services. Nonetheless, how these complex interactions are organized in diverse communities, such as tropical forests, is not fully understood. In this study we evaluated the existence of plant-frugivore sub-assemblages and their phylogenetic organization in an undisturbed western Amazonian forest in Colombia. We also explored for potential keystone plants, based on network analyses and an estimate of the amount of fruit going from plants to frugivores. We carried out diurnal observations on 73 canopy plant species during a period of two years. During focal tree sampling, we recorded frugivore identity, the duration of each individual visit, and feeding rates. We did not find support for the existence of sub assemblages, such as specialized vs. generalized dispersal systems. Visitation rates on the vast majority of canopy species were associated with the relative abundance of frugivores, in which ateline monkeys (i.e. Lagothrix and Ateles) played the most important roles. All fruiting plants were visited by a variety of frugivores and the phylogenetic assemblage was random in more than 67% of the cases. In cases of aggregation, the plant species were consumed by only primates or only birds, and filters were associated with fruit protection and likely chemical content. Plants suggested as keystone species based on the amount of pulp going from plants to frugivores differ from those suggested based on network approaches. Our results suggest that in tropical forests most tree-frugivore interactions are generalized, and abundance should be taken into account when assessing the most important plants for frugivores.
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Berlow EL, Wieters EA, Joppa LN, Wood SA, Brose U, Navarrete SA. Network structure beyond food webs: mapping non-trophic and trophic interactions on Chilean rocky shores. Ecology 2015; 96:291-303. [PMID: 26236914 DOI: 10.1890/13-1424.1] [Citation(s) in RCA: 98] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
How multiple types of non-trophic interactions map onto trophic networks in real communities remains largely unknown. We present the first effort, to our knowledge, describing a comprehensive ecological network that includes all known trophic and diverse non-trophic links among >100 coexisting species for the marine rocky intertidal community of the central Chilean coast. Our results suggest that non-trophic interactions exhibit highly nonrandom structures both alone and with respect to food web structure. The occurrence of different types of interactions, relative to all possible links, was well predicted by trophic structure and simple traits of the source and target species. In this community, competition for space and positive interactions related to habitat/refuge provisioning by sessile and/or basal species were by far the most abundant non-trophic interactions. If these patterns are orroborated in other ecosystems, they may suggest potentially important dynamic constraints on the combined architecture of trophic and non-trophic interactions. The nonrandom patterning of non-trophic interactions suggests a path forward for developing a more comprehensive ecological network theory to predict the functioning and resilience of ecological communities.
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Scotti M, Jordán F. The structural importance of less abundant species in Prince William Sound food web. Isr J Ecol Evol 2015. [DOI: 10.1080/15659801.2015.1067972] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
Rarity of species is often considered to set priorities for biodiversity conservation. Less abundant species are expected to be at higher risk of extinction and make significant contribution to food web functioning. However, the relationship between species abundance and position in food webs is still unclear. Here we tested possible correlations between species abundance and structural position in Prince William Sound food web. Species abundance was inferred from biomass data and structural position was characterized by 13 centrality indices.We found that less abundant species have higher trophic positions and display more generalist feeding strategies. However, positive correlations link most of the centrality indices to population size. Thus, being locally rare translates into more peripheral food web positions and implies marginal roles in the spread of indirect effects. Species characterized by largest population size are responsible for the transfer of largest amounts of biomass and regulate the transmission of indirect effects. Less abundant species are of marginal structural importance and are exposed to impacts mediated by larger populations. In Prince William Sound ecosystem, rarity is associated with critical food web positions and does not simply reflect a marginal contribution to biodiversity.We suggest that knowing the food web position of rare species might help to formulate more effective, system-level solutions for their conservation, rather than simply focusing on the direct treatment of symptoms.
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Affiliation(s)
- Marco Scotti
- GEOMAR Helmholtz Centre for Ocean Research, , Marine Ecology Division, Research Unit Experimental Ecology
| | - Ferenc Jordán
- Danube Research Institute, Centre for Ecological Research, Hungarian Academy of Sciences
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Condie SA, Johnson P, Fulton EA, Bulman CM. Relating food web structure to resilience, keystone status and uncertainty in ecological responses. Ecosphere 2014. [DOI: 10.1890/es14-00068.1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
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Piot A, Nozais C, Archambault P. Meiofauna affect the macrobenthic biodiversity-ecosystem functioning relationship. OIKOS 2013. [DOI: 10.1111/j.1600-0706.2013.00631.x] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Díaz-Uribe JG, Arreguín-Sánchez F, Lercari-Bernier D, Cruz-Escalona VH, Zetina-Rejón MJ, del-Monte-Luna P, Martínez-Aguilar S. An integrated ecosystem trophic model for the North and Central Gulf of California: An alternative view for endemic species conservation. Ecol Modell 2012. [DOI: 10.1016/j.ecolmodel.2012.01.009] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Bauer B, Jordán F, Podani J. Node centrality indices in food webs: Rank orders versus distributions. ECOLOGICAL COMPLEXITY 2010. [DOI: 10.1016/j.ecocom.2009.11.006] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Quantifying the interaction structure and the topological importance of species in food webs: A signed digraph approach. J Theor Biol 2010; 267:355-62. [DOI: 10.1016/j.jtbi.2010.08.035] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2010] [Revised: 07/22/2010] [Accepted: 08/31/2010] [Indexed: 11/20/2022]
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18
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Scotti M, Jordán F. Relationships between centrality indices and trophic levels in food webs. COMMUNITY ECOL 2010. [DOI: 10.1556/comec.11.2010.1.9] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Scotti M, Bondavalli C, Bodini A. Linking trophic positions and flow structure constraints in ecological networks: Energy transfer efficiency or topology effect? Ecol Modell 2009. [DOI: 10.1016/j.ecolmodel.2008.07.034] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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22
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Fedor A, Vasas V. The robustness of keystone indices in food webs. J Theor Biol 2009; 260:372-8. [DOI: 10.1016/j.jtbi.2009.07.003] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2008] [Revised: 05/18/2009] [Accepted: 07/02/2009] [Indexed: 10/20/2022]
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23
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Zhang Y, Yang Z, Yu X. Ecological network and emergy analysis of urban metabolic systems: Model development, and a case study of four Chinese cities. Ecol Modell 2009. [DOI: 10.1016/j.ecolmodel.2009.02.001] [Citation(s) in RCA: 97] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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24
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Cheney KL, Bshary R, Grutter AS. Cleaner fish cause predators to reduce aggression toward bystanders at cleaning stations. Behav Ecol 2008. [DOI: 10.1093/beheco/arn067] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Wey T, Blumstein DT, Shen W, Jordán F. Social network analysis of animal behaviour: a promising tool for the study of sociality. Anim Behav 2008. [DOI: 10.1016/j.anbehav.2007.06.020] [Citation(s) in RCA: 574] [Impact Index Per Article: 33.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Weighting, scale dependence and indirect effects in ecological networks: A comparative study. ECOLOGICAL COMPLEXITY 2007. [DOI: 10.1016/j.ecocom.2007.05.002] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Jordán F, Benedek Z, Podani J. Quantifying positional importance in food webs: A comparison of centrality indices. Ecol Modell 2007. [DOI: 10.1016/j.ecolmodel.2007.02.032] [Citation(s) in RCA: 71] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Benedek Z, Jordán F, Báldi A. Topological keystone species complexes in ecological interaction networks. COMMUNITY ECOL 2007. [DOI: 10.1556/comec.8.2007.1.1] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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