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Bartsch T, Lütz S, Rosenthal K. Cell-free protein synthesis with technical additives - expanding the parameter space of in vitro gene expression. Beilstein J Org Chem 2024; 20:2242-2253. [PMID: 39286794 PMCID: PMC11403795 DOI: 10.3762/bjoc.20.192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2024] [Accepted: 08/22/2024] [Indexed: 09/19/2024] Open
Abstract
Biocatalysis has established itself as a successful tool in organic synthesis. A particularly fast technique for screening enzymes is the in vitro expression or cell-free protein synthesis (CFPS). The system is based on the transcription and translation machinery of an extract-donating organism to which substrates such as nucleotides and amino acids, as well as energy molecules, salts, buffer, etc., are added. After successful protein synthesis, further substrates can be added for an enzyme activity assay. Although mimicking of cell-like conditions is an approach for optimization, the physical and chemical properties of CFPS are not well described yet. To date, standard conditions have mainly been used for CFPS, with little systematic testing of whether conditions closer to intracellular conditions in terms of viscosity, macromolecules, inorganic ions, osmolarity, or water content are advantageous. Also, very few non-physiological conditions have been tested to date that would expand the parameter space in which CFPS can be performed. In this study, the properties of an Escherichia coli extract-based CFPS system are evaluated, and the parameter space is extended to high viscosities, concentrations of inorganic ion and osmolarity using ten different technical additives including organic solvents, polymers, and salts. It is shown that the synthesis of two model proteins, namely superfolder GFP (sfGFP) and the enzyme truncated human cyclic GMP-AMP synthase fused to sfGFP (thscGAS-sfGFP), is very robust against most of the tested additives.
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Affiliation(s)
- Tabea Bartsch
- Department of Biochemical and Chemical Engineering, TU Dortmund University, Emil-Figge-Straße 66, 44227 Dortmund, Germany
| | - Stephan Lütz
- Department of Biochemical and Chemical Engineering, TU Dortmund University, Emil-Figge-Straße 66, 44227 Dortmund, Germany
| | - Katrin Rosenthal
- School of Science, Constructor University, Campus Ring 6, 28759 Bremen, Germany
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Biodegradable Solvents: A Promising Tool to Recover Proteins from Microalgae. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12052391] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
The world will face a significant protein demand in the next few decades, and due to the environmental concerns linked to animal protein, new sustainable protein sources must be found. In this regard, microalgae stand as an outstanding high-quality protein source. However, different steps are needed to separate the proteins from the microalgae biomass and other biocompounds. The protein recovery from the disrupted biomass is usually the bottleneck of the process, and it typically employs organic solvents or harsh conditions, which are both detrimental to protein stability and planet health. Different techniques and methods are applied for protein recovery from various matrices, such as precipitation, filtration, chromatography, electrophoresis, and solvent extraction. Those methods will be reviewed in this work, discussing their advantages, drawbacks, and applicability to the microalgae biorefinery process. Special attention will be paid to solvent extraction performed with ionic liquids (ILs) and deep eutectic solvents (DESs), which stand as promising solvents to perform efficient protein separations with reduced environmental costs compared to classical alternatives. Finally, several solvent recovery options will be analyzed to reuse the solvent employed and isolate the proteins from the solvent phase.
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Liu S, Li Z, Yu B, Wang S, Shen Y, Cong H. Recent advances on protein separation and purification methods. Adv Colloid Interface Sci 2020; 284:102254. [PMID: 32942182 DOI: 10.1016/j.cis.2020.102254] [Citation(s) in RCA: 101] [Impact Index Per Article: 20.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Revised: 09/01/2020] [Accepted: 09/01/2020] [Indexed: 12/21/2022]
Abstract
Protein, as the material basis of vita, is the crucial undertaker of life activities, which constitutes the framework and main substance of human tissues and organs, and takes part in various forms of life activities in organisms. Separating proteins from biomaterials and studying their structures and functions are of great significance for understanding the law of life activities and clarifying the essence of life phenomena. Therefore, scientists have proposed the new concept of proteomics, in which protein separation technology plays a momentous role. It has been diffusely used in the food industry, agricultural biological research, drug development, disease mechanism, plant stress mechanism, and marine environment research. In this paper, combined with the recent research situation, the progress of protein separation technology was reviewed from the aspects of extraction, precipitation, membrane separation, chromatography, electrophoresis, molecular imprinting, microfluidic chip and so on.
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Wessner M, Nowaczyk M, Brandenbusch C. Rapid identification of tailor-made aqueous two-phase systems for the extractive purification of high-value biomolecules. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.113655] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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Pantuso E, Mastropietro TF, Briuglia ML, Gerard CJJ, Curcio E, Ter Horst JH, Nicoletta FP, Di Profio G. On the Aggregation and Nucleation Mechanism of the Monoclonal Antibody Anti-CD20 Near Liquid-Liquid Phase Separation (LLPS). Sci Rep 2020; 10:8902. [PMID: 32483267 PMCID: PMC7264149 DOI: 10.1038/s41598-020-65776-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Accepted: 04/30/2020] [Indexed: 12/02/2022] Open
Abstract
The crystallization of Anti-CD20, a full-length monoclonal antibody, has been studied in the PEG400/Na2SO4/Water system near Liquid-Liquid Phase Separation (LLPS) conditions by both sitting-drop vapour diffusion and batch methods. In order to understand the Anti-CD20 crystallization propensity in the solvent system of different compositions, we investigated some measurable parameters, normally used to assess protein conformational and colloidal stability in solution, with the aim to understand the aggregation mechanism of this complex biomacromolecule. We propose that under crystallization conditions a minor population of specifically aggregated protein molecules are present. While this minor species hardly contributes to the measured average solution behaviour, it induces and promotes crystal formation. The existence of this minor species is the result of the LLPS occurring concomitantly under crystallization conditions.
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Affiliation(s)
- Elvira Pantuso
- Department of Pharmacy, Health and Nutritional Sciences, University of Calabria, Via P. Bucci Edificio Polifunzionale, 87036, Rende, CS, Italy
| | - Teresa F Mastropietro
- National Research Council of Italy (CNR) - Institute on Membrane Technology (ITM), Via P. Bucci Cubo 17/C, 87036, Rende, CS, Italy
| | - Maria L Briuglia
- EPSRC Centre for Innovative Manufacturing in Continuous Manufacturing and Crystallisation (CMAC), Strathclyde Institute of Pharmacy and Biomedical Sciences, Technology and Innovation Centre, University of Strathclyde, 99 George Street, Glasgow, G1 1RD, UK
| | - Charline J J Gerard
- EPSRC Centre for Innovative Manufacturing in Continuous Manufacturing and Crystallisation (CMAC), Strathclyde Institute of Pharmacy and Biomedical Sciences, Technology and Innovation Centre, University of Strathclyde, 99 George Street, Glasgow, G1 1RD, UK
| | - Efrem Curcio
- Department of Environmental Engineering (DIAm), University of Calabria, Via P. Bucci Cubo 45/A, 87036, Rende, CS, Italy
- Seligenda Membrane Technologies S.r.l., Via P. Bucci Cubo 45/A, 87036, Rende, CS, Italy
| | - Joop H Ter Horst
- EPSRC Centre for Innovative Manufacturing in Continuous Manufacturing and Crystallisation (CMAC), Strathclyde Institute of Pharmacy and Biomedical Sciences, Technology and Innovation Centre, University of Strathclyde, 99 George Street, Glasgow, G1 1RD, UK
| | - Fiore P Nicoletta
- Department of Pharmacy, Health and Nutritional Sciences, University of Calabria, Via P. Bucci Edificio Polifunzionale, 87036, Rende, CS, Italy.
| | - Gianluca Di Profio
- National Research Council of Italy (CNR) - Institute on Membrane Technology (ITM), Via P. Bucci Cubo 17/C, 87036, Rende, CS, Italy.
- Seligenda Membrane Technologies S.r.l., Via P. Bucci Cubo 45/A, 87036, Rende, CS, Italy.
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Kaplanow I, Stecker J, Schembecker G, Merz J. Multistage Processing of Tunable Aqueous Polymer Phase Impregnated Resins (TAPPIR®). Chem Eng Technol 2018. [DOI: 10.1002/ceat.201800079] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Irene Kaplanow
- TU Dortmund University; Laboratory of Plant and Process Design; Department of Biochemical and Chemical Engineering; Emil-Figge-Strasse 70 44227 Dortmund Germany
| | - Joel Stecker
- TU Dortmund University; Laboratory of Plant and Process Design; Department of Biochemical and Chemical Engineering; Emil-Figge-Strasse 70 44227 Dortmund Germany
| | - Gerhard Schembecker
- TU Dortmund University; Laboratory of Plant and Process Design; Department of Biochemical and Chemical Engineering; Emil-Figge-Strasse 70 44227 Dortmund Germany
| | - Juliane Merz
- TU Dortmund University; Laboratory of Plant and Process Design; Department of Biochemical and Chemical Engineering; Emil-Figge-Strasse 70 44227 Dortmund Germany
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