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Lu Y, Zhang F, Wang L, Tian Z, Li Y, Li Z, Wen J. Advances in engineering and applications of microbial glutamate decarboxylases for gamma-aminobutyric acid production. Enzyme Microb Technol 2025; 188:110652. [PMID: 40203638 DOI: 10.1016/j.enzmictec.2025.110652] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2025] [Revised: 03/25/2025] [Accepted: 04/02/2025] [Indexed: 04/11/2025]
Abstract
Gamma-aminobutyric acid (GABA) is a key neurotransmitter with significant health benefits, including anxiolytic and anti-hypertensive effects, and potential use in biodegradable material synthesis. The increasing market demand for GABA has intensified the search for cost-effective production methods. The key enzyme involved in GABA production is glutamate decarboxylase (GAD), which catalyzes the conversion of L-glutamate to GABA. GAD plays a central role in various production approaches, such as enzyme-based catalysis, whole-cell catalysis, and microbial fermentation. Although microbial GADs are preferred for their high catalytic activity, their low pH and thermal stability present significant challenges for large-scale GABA production. Wild-type GADs typically have an optimal pH range of 4-5, and their activity sharply declines as the pH increases, thereby reducing production efficiency. Furthermore, GADs' poor thermal stability makes them vulnerable to temperature fluctuations during industrial processes, further limiting GABA production. Recent research has focused on engineering GAD variants with improved stability and performance through rational design, directed evolution, and semi rational approaches. These advancements not only expand the potential applications of GAD in biocatalysis but also offer promising solutions for sustainable GABA production. This paper provides an in-depth review of the engineering of GADs, applications of GAD in GABA production, and strategies to overcome limitations, offering a comprehensive overview of the current state and future prospects of GAD modification in enhancing GABA production.
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Affiliation(s)
- Yuanrong Lu
- College of Chemistry and Bioengineering, Yichun University, 576 Xuefu Road, Yichun City, Jiangxi Province 336000, China
| | - Feng Zhang
- Institute of Subtropical Agriculture Chinese Academy of Sciences, 644 Yuanda 2nd Road, Furong District, Changsha City, Hunan Province 410000, China
| | - Leli Wang
- Institute of Subtropical Agriculture Chinese Academy of Sciences, 644 Yuanda 2nd Road, Furong District, Changsha City, Hunan Province 410000, China
| | - Zhide Tian
- College of Chemistry and Bioengineering, Yichun University, 576 Xuefu Road, Yichun City, Jiangxi Province 336000, China
| | - Yaojun Li
- College of Chemistry and Bioengineering, Yichun University, 576 Xuefu Road, Yichun City, Jiangxi Province 336000, China
| | - Zhouyang Li
- College of Chemistry and Bioengineering, Yichun University, 576 Xuefu Road, Yichun City, Jiangxi Province 336000, China
| | - Jingbai Wen
- College of Chemistry and Bioengineering, Yichun University, 576 Xuefu Road, Yichun City, Jiangxi Province 336000, China.
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Wu LT, Huang YH, Hsieh LS. Production of γ-aminobutyric acid by immobilization of two Yarrowia lipolytica glutamate decarboxylases on electrospun nanofibrous membrane. Int J Biol Macromol 2024; 278:135046. [PMID: 39182890 DOI: 10.1016/j.ijbiomac.2024.135046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2024] [Revised: 08/22/2024] [Accepted: 08/22/2024] [Indexed: 08/27/2024]
Abstract
This study harnesses glutamate decarboxylase (GAD) from Yarrowia lipolytica to improve the biosynthesis of γ-aminobutyric acid (GABA), focusing on boosting the enzyme's catalytic efficiency and stability by immobilizing it on nanofibrous membranes. Through recombinant DNA techniques, two GAD genes, YlGAD1 and YlGAD2, were cloned from Yarrowia lipolytica and then expressed in Escherichia coli. Compared to their soluble forms, the immobilized enzymes exhibited significant improvements in thermal and pH stability and increased resistance to chemical denaturants. The immobilization notably enhanced substrate affinity, as evidenced by reduced Km values and increased kcat values, indicating heightened catalytic efficiency. Additionally, the immobilized YlGAD1 and YlGAD2 enzymes showed substantial reusability, maintaining 50% and 40% of their activity, respectively, after six consecutive cycles. These results underscore the feasibility of employing immobilized YlGAD enzymes for cost-effective and environmentally sustainable GABA production. This investigation not only affirms the utility of YlGADs in GABA synthesis but also underscores the advantages of enzyme immobilization in industrial settings, paving the way for scalable biotechnological processes.
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Affiliation(s)
- Lo-Ting Wu
- Department of Food Science, College of Agriculture and Health, Tunghai University, No. 1727, Sec. 4, Taiwan Boulevard, Xitun District, Taichung 40704, Taiwan
| | - Yi-Hao Huang
- Department of Food Science, College of Agriculture and Health, Tunghai University, No. 1727, Sec. 4, Taiwan Boulevard, Xitun District, Taichung 40704, Taiwan
| | - Lu-Sheng Hsieh
- Department of Food Science, College of Agriculture and Health, Tunghai University, No. 1727, Sec. 4, Taiwan Boulevard, Xitun District, Taichung 40704, Taiwan.
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Liu H, Liu D, Zhang C, Niu H, Xin X, Yi H, Liu D, Zhang J. Whole-genome analysis, evaluation and regulation of in vitro and in vivo GABA production from Levilactobacillus brevis YSJ3. Int J Food Microbiol 2024; 421:110787. [PMID: 38878704 DOI: 10.1016/j.ijfoodmicro.2024.110787] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Revised: 05/28/2024] [Accepted: 06/05/2024] [Indexed: 07/06/2024]
Abstract
Gamma-aminobutyric acid (GABA) produced by lactic acid bacteria (LAB) is safe and has several health benefits. Levilactobacillus brevis YSJ3 was selected from 110 LAB. It exhibited the highest in vitro GABA production level of 970.10 μg/mL. Whole-genome analysis revealed that L. brevis YSJ3 contained gadR, gadC, gadB and gadA. Furthermore, the Luedeking-Piret model was fitted, which indicated that GABA production was divided into three stages. The gadR 0079, gadC 0080, and gadB 0081 were confirmed to promote GABA synthesis. Moreover, 55 metabolites, particularly those involved in arginine metabolism, were significantly different at 6 and 20 h of cultivation. Notably, L. brevis YSJ3 significantly improved sleep in mice and increased GABA levels in the mice's gut compared with the control group. This suggests that the oral administration of L. brevis YSJ3 improves sleep quality, probably by increasing intestinal GABA levels. Overall, L. brevis YSJ3 was confirmed as a GABA-producing strain in vitro and in vivo, making it a promising probiotic candidate for its application in food and medicine.
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Affiliation(s)
- Hui Liu
- Institute of Biological Fermentation, Zhejiang Yiming Food Co. Ltd, Wenzhou, 325000, China
| | - Daiyao Liu
- Institute of Food Science, Key Laboratory of Postharvest Preservation and Processing of Vegetables (Co-construction by Ministry and Province), Laboratory of Fruits and Vegetables Postharvest and Processing Technology Research of Zhejiang Province, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, 310016, China; College of Food Science and Engineering, Ocean University of China, Qingdao, Shandong, 266100, China
| | - Chengcheng Zhang
- Institute of Food Science, Key Laboratory of Postharvest Preservation and Processing of Vegetables (Co-construction by Ministry and Province), Laboratory of Fruits and Vegetables Postharvest and Processing Technology Research of Zhejiang Province, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, 310016, China
| | - Haiyue Niu
- Institute of Food Science, Key Laboratory of Postharvest Preservation and Processing of Vegetables (Co-construction by Ministry and Province), Laboratory of Fruits and Vegetables Postharvest and Processing Technology Research of Zhejiang Province, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, 310016, China
| | - Xiaoting Xin
- Institute of Food Science, Key Laboratory of Postharvest Preservation and Processing of Vegetables (Co-construction by Ministry and Province), Laboratory of Fruits and Vegetables Postharvest and Processing Technology Research of Zhejiang Province, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, 310016, China
| | - Huaxi Yi
- College of Food Science and Engineering, Ocean University of China, Qingdao, Shandong, 266100, China
| | - Daqun Liu
- Institute of Food Science, Key Laboratory of Postharvest Preservation and Processing of Vegetables (Co-construction by Ministry and Province), Laboratory of Fruits and Vegetables Postharvest and Processing Technology Research of Zhejiang Province, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, 310016, China.
| | - Jianming Zhang
- Institute of Food Science, Key Laboratory of Postharvest Preservation and Processing of Vegetables (Co-construction by Ministry and Province), Laboratory of Fruits and Vegetables Postharvest and Processing Technology Research of Zhejiang Province, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, 310016, China.
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Liu C, Du MX, Xie LS, Wang WZ, Chen BS, Yun CY, Sun XW, Luo X, Jiang Y, Wang K, Jiang MZ, Qiao SS, Sun M, Cui BJ, Huang HJ, Qu SP, Li CK, Wu D, Wang LS, Jiang C, Liu HW, Liu SJ. Gut commensal Christensenella minuta modulates host metabolism via acylated secondary bile acids. Nat Microbiol 2024; 9:434-450. [PMID: 38233647 DOI: 10.1038/s41564-023-01570-0] [Citation(s) in RCA: 31] [Impact Index Per Article: 31.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2022] [Accepted: 11/29/2023] [Indexed: 01/19/2024]
Abstract
A strong correlation between gut microbes and host health has been observed in numerous gut metagenomic cohort studies. However, the underlying mechanisms governing host-microbe interactions in the gut remain largely unknown. Here we report that the gut commensal Christensenella minuta modulates host metabolism by generating a previously undescribed class of secondary bile acids with 3-O-acylation substitution that inhibit the intestinal farnesoid X receptor. Administration of C. minuta alleviated features of metabolic disease in high fat diet-induced obese mice associated with a significant increase in these acylated bile acids, which we refer to as 3-O-acyl-cholic acids. Specific knockout of intestinal farnesoid X receptor in mice counteracted the beneficial effects observed in their wild-type counterparts. Finally, we showed that 3-O-acyl-CAs were prevalent in healthy humans but significantly depleted in patients with type 2 diabetes. Our findings indicate a role for C. minuta and acylated bile acids in metabolic diseases.
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Affiliation(s)
- Chang Liu
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, P. R. China
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, P. R. China
| | - Meng-Xuan Du
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, P. R. China
| | - Li-Sheng Xie
- College of Life Science, Hebei University, Baoding, P. R. China
| | - Wen-Zhao Wang
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, P. R. China
| | - Bao-Song Chen
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, P. R. China
| | - Chu-Yu Yun
- Department of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Peking University, Beijing, P. R. China
| | - Xin-Wei Sun
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, P. R. China
| | - Xi Luo
- Department of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Peking University, Beijing, P. R. China
| | - Yu Jiang
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, P. R. China
| | - Kai Wang
- Department of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Peking University, Beijing, P. R. China
| | - Min-Zhi Jiang
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, P. R. China
| | - Shan-Shan Qiao
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, P. R. China
| | - Min Sun
- The Second Hospital of Shandong University, Jinan, P. R. China
| | - Bao-Juan Cui
- The Second Hospital of Shandong University, Jinan, P. R. China
| | - Hao-Jie Huang
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, P. R. China
| | | | | | - Dalei Wu
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, P. R. China
| | - Lu-Shan Wang
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, P. R. China
| | - Changtao Jiang
- Department of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Peking University, Beijing, P. R. China.
- Center of Basic Medical Research, Institute of Medical Innovation and Research, Third Hospital, Peking University, Beijing, P. R. China.
| | - Hong-Wei Liu
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, P. R. China.
| | - Shuang-Jiang Liu
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, P. R. China.
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, P. R. China.
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