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Kanda T, Srivastava R, Yadav S, Singh N, Singh VK, Mishra R, Yadav S, Atri N. Herbicide pretilachlor impairs biofertilizer potential of Anabaena doliolum: Integrating proteomic responses, nitrogen fixation, and computational analysis. JOURNAL OF HAZARDOUS MATERIALS 2025; 494:138673. [PMID: 40412321 DOI: 10.1016/j.jhazmat.2025.138673] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2024] [Revised: 05/04/2025] [Accepted: 05/18/2025] [Indexed: 05/27/2025]
Abstract
This study investigated proteomic alterations in Anabaena doliolum, a diazotrophic cyanobacterium native to Indian paddy fields, to elucidate the molecular basis of herbicide pretilachlor toxicity/tolerance. Proteomic analysis identified 325 proteins, with 124, 149, 179 and 190 proteins expressed at pretilachlor concentrations of 0 (control), 2, 5 and 10 μg/ml, respectively. At 2, 5 and 10 μg/ml, 67, 67 and 71 differentially expressed proteins were identified, involved in photosynthesis, carbon and nitrogen metabolism, protein synthesis, and redox homeostasis. Nitrogen fixation and heterocyst differentiation proteins displayed dose-dependent inhibition, except for slight induction at low dosages. Nitrogenase activity and heterocyst frequency observations further evidenced strong dose-dependent inhibition of nitrogen fixation and heterocyst differentiation. Transcript analysis revealed increased expression of sodA, sodB, and alr3090 at 2-10 μg/ml, with a notable decrease at 20 μg/ml. Molecular docking with pretilachlor yielded relative energy, LibDock scores with hotspot regions of interacting residues. FTIR spectroscopy exhibited alterations in the lipid profile due to oxidative membrane damage and adaptive measures. These findings dissect Anabaena doliolum's response mechanism to pretilachlor toxicity and provide a valuable reference for evaluating the potential risk posed by pretilachlor to native natural biofertilizers in paddy fields.
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Affiliation(s)
- Tripti Kanda
- Department of Botany, M.M.V., Banaras Hindu University, Varanasi, U.P. 221005, India
| | - Rupanshee Srivastava
- Department of Botany, M.M.V., Banaras Hindu University, Varanasi, U.P. 221005, India
| | - Sadhana Yadav
- Department of Botany, M.M.V., Banaras Hindu University, Varanasi, U.P. 221005, India
| | - Nidhi Singh
- Department of Botany, M.M.V., Banaras Hindu University, Varanasi, U.P. 221005, India
| | - Vinay K Singh
- Centre for Bioinformatics, School of Biotechnology, Institute of Science, Banaras Hindu University, Varanasi, U.P. 221005, India
| | - Rajeev Mishra
- Department of Bioinformatics, M.M.V., Banaras Hindu University, Varanasi, U.P. 221005, India
| | - Shivam Yadav
- Department of Botany, University of Allahabad, Prayagraj, U.P. 211002, India.
| | - Neelam Atri
- Department of Botany, M.M.V., Banaras Hindu University, Varanasi, U.P. 221005, India.
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Yadav S, Srivastava R, Singh N, Kanda T, Verma E, Choudhary P, Yadav S, Atri N. Cyanobacteria-Pesticide Interactions and Their Implications for Sustainable Rice Agroecosystems. Int J Microbiol 2025; 2025:7265036. [PMID: 40201931 PMCID: PMC11978480 DOI: 10.1155/ijm/7265036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2024] [Accepted: 02/19/2025] [Indexed: 04/10/2025] Open
Abstract
Modern agricultural practices rely heavily on fertilizers and pesticides to boost crop yields, essential for feeding the growing global population. However, their extensive use poses significant environmental risks. Chemical-based fertilizers and pesticides persist in ecosystems, potentially harming ecological stability. Wetland rice farming utilizing nitrogen-fixing cyanobacteria has emerged as an ecofriendly alternative, drawing attention due to its capacity to mitigate pesticide-related issues. Cyanobacteria, capable of fixing atmospheric nitrogen, thrive in low-nitrogen conditions and can aid plant growth. Some species can also biodegrade pesticides, offering a means to clean up contaminated environments. Researchers are exploring ways to leverage cyanobacteria's nitrogen fixation and biodegradation abilities for ecofriendly biofertilizers and environmental cleanup. This approach presents promise for sustainable agriculture and environmental preservation. The current study delves into multiple studies to investigate global pesticide usage levels, primary categorization, and persistence patterns. It also investigates cyanobacterial distribution and their interactions with pesticides in wetland rice ecosystems, aiming to enable their use in sustainable agriculture. Additionally, the review provides a thorough summary of the literature's findings about the potential of cyanobacteria in pesticide degradation.
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Affiliation(s)
- Sadhana Yadav
- Department of Botany, Mahila Mahavidyalaya, Banaras Hindu University, Varanasi, Uttar Pradesh, India
| | - Rupanshee Srivastava
- Department of Botany, Mahila Mahavidyalaya, Banaras Hindu University, Varanasi, Uttar Pradesh, India
| | - Nidhi Singh
- Department of Botany, Mahila Mahavidyalaya, Banaras Hindu University, Varanasi, Uttar Pradesh, India
| | - Tripti Kanda
- Department of Botany, Mahila Mahavidyalaya, Banaras Hindu University, Varanasi, Uttar Pradesh, India
| | - Ekta Verma
- Department of Botany, Magadh University, Bodhgaya, Bihar, India
| | - Piyush Choudhary
- Oil and Natural Gas Corporation Ltd., Ministry of Petroleum & Natural Gas, New Delhi, India
| | - Shivam Yadav
- Department of Botany, University of Allahabad, Prayagraj, Uttar Pradesh, India
| | - Neelam Atri
- Department of Botany, Mahila Mahavidyalaya, Banaras Hindu University, Varanasi, Uttar Pradesh, India
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Sathishkumar P, Elumalai P, Saravanakumar K, Ganesan AR. Prevalence and impact of herbicides/insecticides on non-target ecosystem and its mitigation strategy. ENVIRONMENTAL RESEARCH 2024; 260:119677. [PMID: 39053759 DOI: 10.1016/j.envres.2024.119677] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2024] [Accepted: 07/23/2024] [Indexed: 07/27/2024]
Affiliation(s)
- Palanivel Sathishkumar
- Green Lab, Department of Prosthodontics, Saveetha Dental College and Hospital, SIMATS, Saveetha University, Chennai, 600 077, Tamil Nadu, India.
| | - Punniyakotti Elumalai
- State Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China
| | - Kandasamy Saravanakumar
- Department of Bio-Health Convergence, Kangwon National University, Chuncheon, 200-701, Republic of Korea
| | - Abirami Ramu Ganesan
- Division of Food Production and Society, Biomarine Resource Valorisation, Norwegian Institute of Bioeconomy Research, Torggården, Kudalsveien 6, NO-8027, Bodø, Norway
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Duc HD, Oanh NT, Dieu Thuy NT, Kim Xuan NT. Degradation of pretilachlor and fenclorim and effects of these compounds on bacterial communities under anaerobic condition. Biodegradation 2024; 35:583-599. [PMID: 38662140 DOI: 10.1007/s10532-024-10078-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2024] [Accepted: 03/06/2024] [Indexed: 04/26/2024]
Abstract
Pretilachlor and safener fenclorim are the main components of herbicides widely applied to control weeds. Although some pure cultures of bacteria and fungi which degraded these compounds under aerobic conditions were isolated, no isolated pretilachlor- and fenclorim-degrading bacterial strains under anaerobic condition had been available. In this study, the degradation of these compounds and the effects of them on bacterial community structures were investigated under anaerobic conditions. The dissipation rates of pretilachlor and fenclorim in slurries were in the order: soil from paddy field ≈ sediment from river > sediment from mangrove. Moreover, three pretilachlor-degrading bacterial strains (Pseudomonas sp. Pr1, Proteiniclasticum sp. Pr2 and Paracoccus denitrificans Pr3) and two fenclorim-degrading strains (Dechloromonas sp. Fe1 and Ralstonia pickettii Fe2) isolated from a slurry of paddy soil utilized the substrates as sole carbon and energy sources under anaerobic conditions. The degradation of pure pretilachlor and fenclorim at various concentrations by corresponding mixed pure cultures followed the Michaelis-Menten model, with the maximum degradation was 3.10 ± 0.31 µM/day for pretilachlor, and 2.08 ± 0.18 µM/day for fenclorim. During the degradation, 2-chloro-N-(2,6-diethylphenyl) acetamide and 2,6-dimethylaniline were produced in pretilachlor degradation, and benzene was a product of fenclorim degradation. The synergistic degradation of both substrates by all isolated bacteria reduced the metabolites concentrations accumulated in media. This study provides valuable information on effects of pretilachlor and fenclorim on bacterial communities in soil and sediments, and degradation of these substrates by isolated bacteria under anaerobic condition.
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Affiliation(s)
- Ha Danh Duc
- Dong Thap University, 783 Pham Huu Lau Street, Cao Lanh, Dong Thap, Vietnam.
| | - Nguyen Thi Oanh
- Dong Thap University, 783 Pham Huu Lau Street, Cao Lanh, Dong Thap, Vietnam.
| | - Nguyen Thi Dieu Thuy
- Institute of Biotechnology, Vietnam Academy of Science and Technology, Ha Noi, Vietnam
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