Non-productive adsorption of bacterial β-glucosidases on lignins is electrostatically modulated and depends on the presence of fibronection type III-like domain

The combination of hydrothermal humification and biological fermentation converts straw lignocellulose into artificial fulvic acid

In order to solve the problem of difficult efficient utilization and production of lignocellulosic macromolecules in crop straw, as well as the high pollution production of fulvic acid (FA). We developed an efficient biomass conversion technology that combines hydrothermal humification and biological fermentation in a low alkaline environment. Discussed material conversion and FA structural composition. FA was produced through five steps, namely, enzymatic hydrolysis, hydrothermal treatment, concentration, fermentation and spraying, with a maximum yield of 39 %. The optimal enzymatic hydrolysis conditions were 0.2 % hemicellulase, 50 °C and 6 h. The optimal hydrothermal conditions were 5 % KOH, 160 °C and 2 h. The optimal distillation conditions were 50 °C for 25 min. The optimal conditions for microbial fermentation were 0.02 % Bacillus subtilis/Bacillus licheniformis, 35 °C and of 48 h. Finally, high-temperature spraying was performed at 240 °C. Under these conditions, benzofuran, 2,3-dihydro, and 2-methyl-4-vinylphenol provided precursors for FA and increased the total acidic groups to 14.06 mmol/g. In practical applications, artificial FA has also demonstrated its ability to regulate the absorption of cadmium by plants. In addition, the prepared artificial FA has a relatively high content of hydroxyl and carboxyl groups, which may have strong electron transfer and metal binding abilities. Suitable for various applications in sustainable agriculture and biomass directed conversion.

Deciphering the Impact of Lignin on Anaerobic Digestion: Focus on Inhibition Mechanisms and Methods for Alleviating Inhibition

China has abundant lignocellulosic biomass resources. These resources are converted into biogas by anaerobic digestion (AD), which not only realizes the comprehensive utilization of waste resources but also obtains abundant biomass energy. However, the low biodegradability of lignocellulosic biomass caused by the complex structure has seriously hindered its utilization by enzymes and microorganisms, resulting in low biogas production and limited development of biogas engineering. The purpose of this work is to analyze the mechanism of lignin inhibiting AD and summarize the main methods for alleviating inhibition. Based on this, this review examines the factors influencing lignin's inhibition of methane production during AD from two key perspectives: (1) discussing lignin's biodegradability challenges, with a focus on its structure, functional groups, and the impact of lignin content in lignocellulosic biomass on its methanogenic potential, and (2) analyzing lignin's impact on each stage of AD. In addition, we provide insights into future research directions in this field.

A Multiomics Perspective on Plant Cell Wall-Degrading Enzyme Production: Insights from the Unexploited Fungus Trichoderma erinaceum

Trichoderma erinaceum is a filamentous fungus that was isolated from decaying sugarcane straw at a Brazilian ethanol biorefinery. This fungus shows potential as a source of plant cell wall-degrading enzymes (PCWDEs). In this study, we conducted a comprehensive multiomics investigation of T. erinaceum to gain insights into its enzymatic capabilities and genetic makeup. Firstly, we performed genome sequencing and assembly, which resulted in the identification of 10,942 genes in the T. erinaceum genome. We then conducted transcriptomics and secretome analyses to map the gene expression patterns and identify the enzymes produced by T. erinaceum in the presence of different substrates such as glucose, microcrystalline cellulose, pretreated sugarcane straw, and pretreated energy cane bagasse. Our analyses revealed that T. erinaceum highly expresses genes directly related to lignocellulose degradation when grown on pretreated energy cane and sugarcane substrates. Furthermore, our secretome analysis identified 35 carbohydrate-active enzymes, primarily PCWDEs. To further explore the enzymatic capabilities of T. erinaceum, we selected a β-glucosidase from the secretome data for recombinant production in a fungal strain. The recombinant enzyme demonstrated superior performance in degrading cellobiose and laminaribiose compared to a well-known enzyme derived from Trichoderma reesei. Overall, this comprehensive study provides valuable insights into both the genetic patterns of T. erinaceum and its potential for lignocellulose degradation and enzyme production. The obtained genomic data can serve as an important resource for future genetic engineering efforts aimed at optimizing enzyme production from this fungus.

Improving enzymatic efficiency of β-glucosidases in cellulase system by altering its binding behavior to the insoluble substrate during bioconversion of lignocellulose

The enzymatic efficiency of β-glucosidases is influenced by their binding behavior onto insoluble substrates (cellulose and lignin) during bioconversion of lignocellulose. This study suggested that the Bgl3 protein (Aspergillus fumigatus) showed strong adsorption affinity to lignin and the Bgl1 protein (Penicillium oxalicum) tended to adsorb to cellulose. It indicated that the various surface properties of the fibronectin type Ш-like domain (FnIII) led to different binding properties of β-glucosidases by investigating their binding mechanism. By engineering β-glucosidases' FnIII domain, Bgl3-1 and Bgl1-3 were constructed, which both showed lower binding capacities to insoluble substrates. As well as for Bgl1-3, its sensitivity to the phenolic component was also eased. Based on that, the reconstructed protein showed high catalytic efficiency during the enzymatic hydrolysis of corn stover by effectively transforming cellobiose to glucose. Thus, this study provided a new strategy to engineer β-glucosidases to enhance their performance in the cellulase system.

Using highly recyclable sodium caseinate to enhance lignocellulosic hydrolysis and cellulase recovery

Most additives that capable of enhancing enzymatic hydrolysis of lignocellulose are petroleum-based, which are not easy to recycle with poor biodegradability. In this work, highly recyclable and biodegradable sodium caseinate (SC) was used to enhance lignocellulosic hydrolysis with improved cellulase recyclability. When the pH decreased from 5.5 to 4.8, more than 96% SC could be precipitated from the solution and recovered. Adding SC increased enzymatic digestibility of dilute acid pretreated eucalyptus (Eu-DA) from 39.5% to 78.2% under Eu-DA loading of 10 wt% and pH = 5.5, and increase cellulase content in 72 h hydrolysate from only 15.2% of the original to 60.0%, which facilitated the recovery of cellulases through re-adsorption by fresh substrates. With multiple cycles of re-adsorption, application of SC not only increased the sugar yield of Eu-DA by 95.5%, but also reduced cellulase loading by 40%.

Studies of adsorptive capacity of bacterial β-glucosidases on lignocresol aiming the enzymatic recycling in bioprocesses

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Lignocresol has great capacity for use in recovery and enzymatic recycling in bioprocesses due to its adsorptive capacity.

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The adsorption of TpBgl3 to Lignocresol is higher compared to TpBgl1.

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The interactions between lignocresol and enzymes are influenced by electrostatic characteristics, and surface hydrophobicity.

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Glucose does not affect the adsorption of enzymes onto lignocresol.

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TpBgl1 bound to lignocresol maintains a residual enzymatic activity.

Enzymes are essential in many biological processes, including second-generation ethanol production. However, enzymes are one of the main expenses for the industrial process in these days. Several studies have been done to maximize cost savings, however, many processes are still economically infeasible. In this study, we report the synthesis of a suspension of lignocresol for recycling or reuse of enzymes in bioprocesses. In this way, it was performed the adsorption assays between lignocresol and β-glucosidases from Thermotoga petrophila, belonging to the families GH1 and GH3, for the development of a lignocresol-enzyme complex. Our results show that lignocresol maintains greater adsorptive capacity for β-glucosidases than lignin. This capacity can be explained both by its great hydrophobicity and also by electrostatic characteristics. Therefore, all these results demonstrate good adsorption of the enzymes to the lignocresol, demonstrating great potential for enzymatic recycling.

Systematic studies of the interactions between a model polyphenol compound and microbial β-glucosidases

Lignin is a major obstacle for cost-effective conversion of cellulose into fermentable sugars. Non-productive adsorption onto insoluble lignin fragments and interactions with soluble phenols are important inhibition mechanisms of cellulases, including β-glucosidases. Here, we examined the inhibitory effect of tannic acid (TAN), a model polyphenolic compound, on β-glucosidases from the bacterium Thermotoga petrophila (TpBGL1 and TpBGL3) and archaeon Pyrococcus furiosus (PfBGL1). The results revealed that the inhibition effects on β-glucosidases were TAN concentration-dependent. TpBGL1 and TpBGL3 were more tolerant to the presence of TAN when compared with PfBGL1, while TpBGL1 was less inhibited when compared with TpBGL3. In an attempt to better understand the inhibitory effect, the interaction between TAN and β-glucosidases were analyzed by isothermal titration calorimetry (ITC). Furthermore, the exposed hydrophobic surface areas in β-glucosidases were analyzed using a fluorescent probe and compared with the results of inhibition and ITC. The binding constants determined by ITC for the interactions between TAN and β-glucosidases presented the same order of magnitude. However, the number of binding sites and exposed hydrophobic surface areas varied for the β-glucosidases studied. The binding between TAN and β-glucosidases were driven by enthalpic effects and with an unfavorable negative change in entropy upon binding. Furthermore, the data suggest that there is a high correlation between exposed hydrophobic surface areas and the number of binding sites on the inhibition of microbial β-glucosidases by TAN. These studies can be useful for biotechnological applications.