1
|
Makino Y, Kurokawa Y, Kawai K, Akihiro T. Classification of Packaged Vegetable Soybeans Based on Freshness by Metabolomics Combined with Convolutional Neural Networks. Metabolites 2025; 15:145. [PMID: 40137110 PMCID: PMC11943506 DOI: 10.3390/metabo15030145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2025] [Revised: 02/11/2025] [Accepted: 02/20/2025] [Indexed: 03/27/2025] Open
Abstract
Background/Objectives: Effectiveness of modified atmosphere (MA) packaging for the preservation of the freshness of vegetable soybeans was confirmed by using metabolomics combined with convolutional neural networks (CNNs). Methods: Stored under a low O2, high CO2 environment, the vegetable soybeans' freshness was tracked through changes in hue angle on the surface of the crops and metabolite levels compared to those stored under normoxia. Results: MA packaging slowed respiration and reduced pectin decomposition, succinic acid oxidation, and fatty acid consumption, all linked to freshness maintenance. Using 62 key metabolite concentrations as inputs, CNNs classified vegetable soybean freshness into seven categories with 92.9% accuracy, outperforming traditional linear discriminant analysis by 14.3%. Conclusions: These findings demonstrate MA packaging's effectiveness in extending freshness of vegetable soybeans by monitoring specific metabolic changes. This will contribute to the advancement of research aimed at elucidating the relationship between freshness and metabolism in horticultural crops.
Collapse
Affiliation(s)
- Yoshio Makino
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 1138657, Japan
| | - Yuta Kurokawa
- BelleGreenWise Co., Ltd., Nagoya 4600007, Aichi, Japan
| | - Kenji Kawai
- BelleGreenWise Co., Ltd., Nagoya 4600007, Aichi, Japan
| | - Takashi Akihiro
- Faculty of Life and Environmental Science, Shimane University, Matsue 6908504, Shimane, Japan
| |
Collapse
|
2
|
Ikawa H, Hasegawa T, Kumagai E, Wakatsuki H, Sekiyama Y, Nagano AJ, Kuwagata T. Enhanced decreases in rice evapotranspiration in response to elevated atmospheric carbon dioxide under warmer environments. PLANT, CELL & ENVIRONMENT 2024; 47:3514-3527. [PMID: 38922904 DOI: 10.1111/pce.15013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 03/21/2024] [Accepted: 06/13/2024] [Indexed: 06/28/2024]
Abstract
A short period of exposure to elevated CO2 is known to decrease evapotranspiration via stomatal closure. Based on theoretical evaluation of a canopy transpiration model, we hypothesized that this decrease in the evapotranspiration of rice under elevated CO2 was greater under higher temperature conditions due to an increased sensitivity of transpiration to changes in CO2 induced by the greater vapour pressure deficit. In a temperature gradient chamber-based experiment, a 200 ppm increase in CO2 concentration led to 0.4 mm (-7%) and 1.5 mm (-15%) decreases in 12 h evapotranspiration under ambient temperature and high temperature (+3.7°C) conditions, respectively. Model simulations revealed that the greater vapour pressure deficit under higher temperature conditions explained the variations in the reduction of evapotranspiration observed under elevated CO2 levels between the temperature treatments. Our study suggests the utility of a simple modelling framework for mechanistic understanding of evapotranspiration and crop energy balance system under changing environmental conditions.
Collapse
Affiliation(s)
- Hiroki Ikawa
- Hokkaido Agricultural Research Center, National Agriculture and Food Research Organization, Sapporo, Hokkaido, Japan
| | - Toshihiro Hasegawa
- Tohoku Agricultural Research Center, National Agriculture and Food Research Organization, Morioka, Iwate, Japan
- Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan
| | - Etsushi Kumagai
- Tohoku Agricultural Research Center, National Agriculture and Food Research Organization, Morioka, Iwate, Japan
- Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan
| | - Hitomi Wakatsuki
- Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan
| | - Yasuyo Sekiyama
- Research Center for Advanced Analysis, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan
| | - Atsushi J Nagano
- Faculty of Agriculture, Ryukoku University, Otsu, Japan
- Institute for Advanced Biosciences, Keio University, Tsuruoka, Japan
| | - Tsuneo Kuwagata
- Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan
| |
Collapse
|
3
|
You Q, Wang Z, Tian X, Xu X. A multi-block data approach to assessing beef quality: ComDim analysis of hyperspectral imaging, 1H NMR, electronic nose and quality parameters data. Food Chem 2023; 425:136469. [PMID: 37270887 DOI: 10.1016/j.foodchem.2023.136469] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Revised: 05/22/2023] [Accepted: 05/25/2023] [Indexed: 06/06/2023]
Abstract
Several factors affect the quality of beef. In the field of chemometrics, multi-block data analysis methods are useful for examining multiple sources of information from a sample. This study focuses on the application of ComDim, a multi-block data analysis method, to evaluate beef from different parts of hyperspectral spectrum and image texture information, 1H NMR fingerprints, quality parameters and electronic nose. Compared to principal component analysis (PCA) methods based on low-level data fusion, ComDim is more efficient and powerful, because it reveals the relationships between the methods and techniques studied, as well as the variability of beef quality across multiple metrics. The quality and metabolite composition of beef tenderloin and hindquarters were differentiated, with low L* value and high shear tenderloin distinguished from hindquarters with opposite characteristics. The proposed strategy demonstrates that ComDim approach can be used to characterize samples when different techniques describe the same set of samples.
Collapse
Affiliation(s)
- Qian You
- Guangdong Provincial Key Laboratory of Food Quality and Safety, Nation-Local Joint Engineering Research Center for Machining and Safety of Livestock and Poultry Products, South China Agricultural University, Guangzhou 510642, China
| | - Ziyuan Wang
- Guangdong Provincial Key Laboratory of Food Quality and Safety, Nation-Local Joint Engineering Research Center for Machining and Safety of Livestock and Poultry Products, South China Agricultural University, Guangzhou 510642, China
| | - Xingguo Tian
- Guangdong Provincial Key Laboratory of Food Quality and Safety, Nation-Local Joint Engineering Research Center for Machining and Safety of Livestock and Poultry Products, South China Agricultural University, Guangzhou 510642, China.
| | - Xiaoyan Xu
- Guangdong Provincial Key Laboratory of Food Quality and Safety, Nation-Local Joint Engineering Research Center for Machining and Safety of Livestock and Poultry Products, South China Agricultural University, Guangzhou 510642, China.
| |
Collapse
|
4
|
Zainal PW, Syukri D, Fahmy K, Imaizumi T, Thammawong M, Tsuta M, Nagata M, Nakano K. Lipidomic Profiling to Assess the Freshness of Stored Cabbage. FOOD ANAL METHOD 2022. [DOI: 10.1007/s12161-022-02422-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
|
5
|
Study on apple damage detecting method based on relaxation single-wavelength laser and convolutional neural network. JOURNAL OF FOOD MEASUREMENT AND CHARACTERIZATION 2022. [DOI: 10.1007/s11694-022-01429-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
|
6
|
Zhang T, Chen C, Xie K, Wang J, Pan Z. Current State of Metabolomics Research in Meat Quality Analysis and Authentication. Foods 2021; 10:2388. [PMID: 34681437 PMCID: PMC8535928 DOI: 10.3390/foods10102388] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Revised: 09/27/2021] [Accepted: 09/28/2021] [Indexed: 12/23/2022] Open
Abstract
In the past decades, as an emerging omic, metabolomics has been widely used in meat science research, showing promise in meat quality analysis and meat authentication. This review first provides a brief overview of the concept, analytical techniques, and analysis workflow of metabolomics. Additionally, the metabolomics research in quality analysis and authentication of meat is comprehensively described. Finally, the limitations, challenges, and future trends of metabolomics application in meat quality analysis and meat authentication are critically discussed. We hope to provide valuable insights for further research in meat quality.
Collapse
Affiliation(s)
- Tao Zhang
- College of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China; (T.Z.); (C.C.); (K.X.)
- Joint International Research Laboratory of Agriculture and Agri-Product Safety, Ministry of Education, Yangzhou University, Yangzhou 225009, China;
| | - Can Chen
- College of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China; (T.Z.); (C.C.); (K.X.)
- Joint International Research Laboratory of Agriculture and Agri-Product Safety, Ministry of Education, Yangzhou University, Yangzhou 225009, China;
| | - Kaizhou Xie
- College of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China; (T.Z.); (C.C.); (K.X.)
- Joint International Research Laboratory of Agriculture and Agri-Product Safety, Ministry of Education, Yangzhou University, Yangzhou 225009, China;
| | - Jinyu Wang
- College of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China; (T.Z.); (C.C.); (K.X.)
- Joint International Research Laboratory of Agriculture and Agri-Product Safety, Ministry of Education, Yangzhou University, Yangzhou 225009, China;
| | - Zhiming Pan
- Joint International Research Laboratory of Agriculture and Agri-Product Safety, Ministry of Education, Yangzhou University, Yangzhou 225009, China;
- Jiangsu Key Laboratory of Zoonosis, Key Laboratory of Prevention and Control of Biological Hazard Factors (Animal Origin) for Agrifood Safety and Quality, Ministry of Agriculture and Rural Affairs of the People’s Republic of China, Yangzhou University, Yangzhou 225009, China
| |
Collapse
|