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Li C, Zhong M, Guo E, Xu H, Wen C, Zhu S, Li Q, Zhu D, Luo X. Response of bacterial and fungal communities in natural biofilms to bioavailable heavy metals in a mining-affected river. WATER RESEARCH 2024; 267:122470. [PMID: 39305524 DOI: 10.1016/j.watres.2024.122470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2024] [Revised: 09/04/2024] [Accepted: 09/16/2024] [Indexed: 11/28/2024]
Abstract
Biofilms, known as "microbial skin" in rivers, respond to rapid and sensitive environmental changes. However, the ecological response mechanisms of bacterial and fungal communities in river biofilms toward heavy metal pollution (HMP) remains poorly understood. This study focused on the key driving factors of bacterial and fungal community diversity and composition and their ecological response mechanisms within periphytic biofilms of Asia's largest Pb-Zn mining area. The diversity, dominant bacterial taxa, and bacteria structure in biofilms were influenced by biologically available heavy metal (HM) fractions, with Ni-F3 (17.96 %) and Pb-F4 (16.27 %) as the main factors affecting the bacterial community structure. Fungal community structure and α-diversity were more susceptible to physicochemical parameters (pH and nutrient elements). Partial least squares path modeling revealed that environmental factors influencing bacterial and fungal communities in biofilms were ranked as water quality > metal fractions > total metals. Dispersal limitation was the most critical ecological process in bacterial (56.9 %) and fungal (73.4 %) assembly. The proportion of heterogeneous selection by bacteria (39.5 %) was higher than that of fungus (26.2 %), which increased with increasing HMP. Bacterial communities had a higher migration rate (0.48) and ecological drift proportion (3.6 %), making them more prone to escape environmental stress. Fungal communities exhibited more keystone species, larger niche width (23.24 ± 13.04 vs. 9.72 ± 5.48), higher organization level, and a more stable co-occurrence network than bacterial communities, which enabled them to better adapt to high environmental pollution levels. These findings expanded the understanding of the spatiotemporal dynamics of microbial communities within biofilms in HM-polluted watersheds and provided new insights into the ecological responses of microbial communities to HMP.
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Affiliation(s)
- Chunyan Li
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, 650500, China; Yunnan Key Laboratory of International Rivers and Transboundary Eco-Security, Kunming, 650500, China; Asian International Rivers Center, Kunming, Yunnan, 650500, China
| | - Mei Zhong
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, 650500, China; Yunnan Key Laboratory of International Rivers and Transboundary Eco-Security, Kunming, 650500, China; Asian International Rivers Center, Kunming, Yunnan, 650500, China
| | - Ende Guo
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, 650500, China; Yunnan Key Laboratory of International Rivers and Transboundary Eco-Security, Kunming, 650500, China; Asian International Rivers Center, Kunming, Yunnan, 650500, China
| | - Hansen Xu
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, 650500, China; Yunnan Key Laboratory of International Rivers and Transboundary Eco-Security, Kunming, 650500, China; Asian International Rivers Center, Kunming, Yunnan, 650500, China
| | - Chen Wen
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, 650500, China; Yunnan Key Laboratory of International Rivers and Transboundary Eco-Security, Kunming, 650500, China; Asian International Rivers Center, Kunming, Yunnan, 650500, China
| | - Shiqi Zhu
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, 650500, China; Yunnan Key Laboratory of International Rivers and Transboundary Eco-Security, Kunming, 650500, China; Asian International Rivers Center, Kunming, Yunnan, 650500, China
| | - Qi Li
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, 650500, China; Yunnan Key Laboratory of International Rivers and Transboundary Eco-Security, Kunming, 650500, China; Asian International Rivers Center, Kunming, Yunnan, 650500, China
| | - Dan Zhu
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, 650500, China; Yunnan Key Laboratory of International Rivers and Transboundary Eco-Security, Kunming, 650500, China; Asian International Rivers Center, Kunming, Yunnan, 650500, China
| | - Xia Luo
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, 650500, China; Yunnan Key Laboratory of International Rivers and Transboundary Eco-Security, Kunming, 650500, China; Asian International Rivers Center, Kunming, Yunnan, 650500, China.
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Yang W, Zhang S, Li A, Yang J, Pang S, Hu Z, Wang Z, Han X, Zhang X. Nitrogen deposition mediates more stochastic processes in structuring plant community than soil microbial community in the Eurasian steppe. SCIENCE CHINA. LIFE SCIENCES 2024; 67:778-788. [PMID: 38212459 DOI: 10.1007/s11427-023-2416-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Accepted: 08/08/2023] [Indexed: 01/13/2024]
Abstract
Anthropogenic environmental changes may affect community assembly through mediating both deterministic (e.g., competitive exclusion and environmental filtering) and stochastic processes (e.g., birth/death and dispersal/colonization). It is traditionally thought that environmental changes have a larger mediation effect on stochastic processes in structuring soil microbial community than aboveground plant community; however, this hypothesis remains largely untested. Here we report an unexpected pattern that nitrogen (N) deposition has a larger mediation effect on stochastic processes in structuring plant community than soil microbial community (those <2 mm in diameter, including archaea, bacteria, fungi, and protists) in the Eurasian steppe. We performed a ten-year nitrogen deposition experiment in a semiarid grassland ecosystem in Inner Mongolia, manipulating nine rates (0-50 g N m-2 per year) at two frequencies (nitrogen added twice or 12 times per year) under two grassland management strategies (fencing or mowing). We separated the compositional variation of plant and soil microbial communities caused by each treatment into the deterministic and stochastic components with a recently-developed method. As nitrogen addition rate increased, the relative importance of stochastic component of plant community first increased and then decreased, while that of soil microbial community first decreased and then increased. On the whole, the relative importance of stochastic component was significantly larger in plant community (0.552±0.035; mean±standard error) than in microbial community (0.427±0.035). Consistently, the proportion of compositional variation explained by the deterministic soil and community indices was smaller for plant community (0.172-0.186) than microbial community (0.240-0.767). Meanwhile, as nitrogen addition rate increased, the linkage between plant and microbial community composition first became weaker and then became stronger. The larger stochasticity in plant community relative to microbial community assembly suggested that more stochastic strategies (e.g., seeds addition) should be adopted to maintain above- than below-ground biodiversity under the pressure of nitrogen deposition.
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Affiliation(s)
- Wei Yang
- Key Laboratory of Dryland Agriculture, Ministry of Agriculture, Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Shuhan Zhang
- Key Laboratory of Dryland Agriculture, Ministry of Agriculture, Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Ang Li
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Junjie Yang
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Shuang Pang
- Key Laboratory of Dryland Agriculture, Ministry of Agriculture, Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Zonghao Hu
- Key Laboratory of Dryland Agriculture, Ministry of Agriculture, Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Zhiping Wang
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Xingguo Han
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
| | - Ximei Zhang
- Key Laboratory of Dryland Agriculture, Ministry of Agriculture, Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
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Wei F, Xie T, Su C, He B, Shu Z, Zhang Y, Xiao Z, Hao J. Stability and Assembly Mechanisms of Butterfly Communities across Environmental Gradients of a Subtropical Mountain. INSECTS 2024; 15:230. [PMID: 38667360 PMCID: PMC11050375 DOI: 10.3390/insects15040230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 03/21/2024] [Accepted: 03/24/2024] [Indexed: 04/28/2024]
Abstract
Mountain ecosystems harbor evolutionarily unique and exceptionally rich biodiversity, particularly in insects. In this study, we characterized the diversity, community stability, and assembly mechanisms of butterflies on a subtropical mountain in the Chebaling National Nature Reserve, Guangdong Province, China, using grid-based monitoring across the entire region for two years. The results showed that species richness, abundance, and Faith's phylogenetic diversity decreased with increasing elevation; taxonomic diversity played a considerable role in mediating the effects of environmental changes on stability. Moreover, our results showed that stochastic processes are dominant in governing the assembly of butterfly communities across all elevational gradients, with habitats at an elevation of 416-580 m subjected to the strongest stochastic processes, whereas heterogeneous selection processes displayed stronger effects on the assembly of butterfly communities at 744-908 m, 580-744 m, and 908-1072 m, with abiotic factors inferred as the main driving forces. In addition, significant differences were detected between the barcode tree and the placement tree for the calculated β-NTI values at 416-580 m. Overall, this study provides new insights into the effects of environmental change on the stability and assembly of butterflies in Chebaling, which will be beneficial for biodiversity conservation and policy development.
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Affiliation(s)
- Fanyu Wei
- College of Life Sciences, Anhui Normal University, Wuhu 241000, China; (F.W.); (T.X.); (C.S.); (B.H.)
| | - Tingting Xie
- College of Life Sciences, Anhui Normal University, Wuhu 241000, China; (F.W.); (T.X.); (C.S.); (B.H.)
- Key Laboratory of Zoological and Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100045, China
| | - Chengyong Su
- College of Life Sciences, Anhui Normal University, Wuhu 241000, China; (F.W.); (T.X.); (C.S.); (B.H.)
| | - Bo He
- College of Life Sciences, Anhui Normal University, Wuhu 241000, China; (F.W.); (T.X.); (C.S.); (B.H.)
| | - Zufei Shu
- Guangdong Chebaling National Nature Reserve Administration Bureau, Shaoguan 512500, China; (Z.S.); (Y.Z.)
| | - Yingming Zhang
- Guangdong Chebaling National Nature Reserve Administration Bureau, Shaoguan 512500, China; (Z.S.); (Y.Z.)
| | - Zhishu Xiao
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beijing 100045, China
| | - Jiasheng Hao
- College of Life Sciences, Anhui Normal University, Wuhu 241000, China; (F.W.); (T.X.); (C.S.); (B.H.)
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Wang X, Zhang Q, Zhang Z, Li W, Liu W, Xiao N, Liu H, Wang L, Li Z, Ma J, Liu Q, Ren C, Yang G, Zhong Z, Han X. Decreased soil multifunctionality is associated with altered microbial network properties under precipitation reduction in a semiarid grassland. IMETA 2023; 2:e106. [PMID: 38868425 PMCID: PMC10989785 DOI: 10.1002/imt2.106] [Citation(s) in RCA: 31] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 03/20/2023] [Accepted: 04/06/2023] [Indexed: 06/14/2024]
Abstract
Our results reveal different responses of soil multifunctionality to increased and decreased precipitation. By linking microbial network properties to soil functions, we also show that network complexity and potentially competitive interactions are key drivers of soil multifunctionality.
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Affiliation(s)
- Xing Wang
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Qi Zhang
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Zhenjiao Zhang
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Wenjie Li
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Weichao Liu
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Naijia Xiao
- Institute for Environmental Genomics and Department of Microbiology and Plant BiologyUniversity of OklahomaNormanOklahomaUSA
| | - Hanyu Liu
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Leyin Wang
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Zhenxia Li
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Jing Ma
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Quanyong Liu
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Chengjie Ren
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Gaihe Yang
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
| | - Zekun Zhong
- Institute of Soil and Water ConservationNorthwest A&F UniversityYanglingChina
| | - Xinhui Han
- College of AgronomyNorthwest A&F UniversityYanglingChina
- Shaanxi Engineering Research Center of Circular AgricultureYanglingChina
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Ma R, Zheng W, Guo J, Hou R, Huang H, Xue F, Zhou Y, Wu W, Huang C, Gu J, Feng F, Yu X, Liu J, Li Z, Zhang L, Lan G, Chen C, Bi W, Dai Q, Owens JR, Yang H, Gu X, Yan QG, Qi D. Symbiotic microbiota and odor ensure mating in time for giant pandas. Front Microbiol 2022; 13:1015513. [PMID: 36466630 PMCID: PMC9712809 DOI: 10.3389/fmicb.2022.1015513] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Accepted: 10/27/2022] [Indexed: 06/29/2024] Open
Abstract
To achieve reproduction, male solitary mammals need to locate females using chemical communication with high levels of precision. In the case of giant pandas, the total estrus period of females was usually 15 days each year, however, successful mating activity is finished within 3 days from respective home range. The mating pattern of giant pandas, where multiple males compete for each female requires females employ efficient systems to communicate their estrus phases. To verifying whether the scent secretions of giant pandas changes by gender and estrus progression, the microbiota and compounds in 29 anogenital gland samples from 14 individuals during estrus were analyzed by 16S rRNA sequencing and GC-MS. We show that the microbiota communities covary by gender with 4 particular compounds of scent secretions. Among 597 genera, 34 were identified as biomarkers that could be used to distinguish between different estrus phases. By bacterial-compounds co-analysis, 3 fatty ester acids and squalene compounds covaried with the development of estrus in the bacterial communities of female giant pandas. This study helps clarify how a large, solitary mammal expresses accurate information to improve the likelihood of successful reproduction by changing the composition of microbiota and odor compounds of anogenital glands during estrus.
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Affiliation(s)
- Rui Ma
- College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | | | - Junliang Guo
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Rong Hou
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - He Huang
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Fei Xue
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Yanshan Zhou
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Wei Wu
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Chong Huang
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Jiang Gu
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Feifei Feng
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Xiang Yu
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Jiabin Liu
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Zusheng Li
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Long Zhang
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Guanwei Lan
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Chao Chen
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Wenlei Bi
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
| | - Qiang Dai
- Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China
| | - Jacob R. Owens
- Los Angeles Zoo & Botanical Gardens, Los Angeles, CA, United States
| | - Hong Yang
- Daxiangling Nature Reserve, Yaan, China
| | - Xiaodong Gu
- Sichuan Forestry and Grassland Bureau, Chengdu, China
| | - Qi-gui Yan
- College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China
| | - Dunwu Qi
- Sichuan Key Laboratory of Conservation Biology for Endangered Wildlife, Chengdu Research Base of Giant Panda Breeding, Chengdu, China
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